Rh1DG168900

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1D
Physical Location & Seq
Forward (+)
34751116 .. 34773794
22679 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1DG168900.1

Sequence Viewer

Length: 1797 bp
ATGGAGTTTCAAGAGTTGAGGCAAACAGTCATCCTGGCCTTTGTGACTTTCTGTTGCCTCATTGGTCACTTGTGTGCTGATATTGAAAAAACAAATAGTGATACTAGTCCTGTTGTTGTTGAAGATCAGGTTCATGTCGGTGTCATTCTCGATATGGGATCAAGGGAAGGAAAGATTATTCTCAGCTGCATATCAATGGCCCTCTCTGATTTTTACCATCTGCATGATAACTACAGTACAAGAGTAGTTCTCCACAGTAAGGATTCCAAAGGTGAACCTCTGCCTGCTCTGTCAGCTGCCCTTGGTCTTTTGGAAAACATCAAAGTGGAATCAATAATTGGTGCACAAACAAGAGCGGAAGCAAACCTTTTGGCAGAATTAGGAGAAGCGGCTAAACTCCCTGTAATGTCTCTTTCTCCTCCTCTGACCAACAATAACTATCCTTTCTTTGTTGAGATCATGCGCGGTGATCAAGCTGCTGAAGTTAGGGGAATCAGTGCGCTTATTGAAGTATTCAAATGGAGGGATGTTATACTTTTATATGATAATAAAGAATATGAGAAAGACTTCATTCCATCATTAGTCAACTCTTTCCAAGAGATCACACATGGGAGTGTTTCATACCAGAATTCCAATATTGCTTCCTCCTCATCAAATGAAGAAATCATCGAAGAGCTCCAAAAGCTGATGAGATTGAAGATTAAGGTATTTGTGGTGCATGTGTCACATATGCTTGCACCACGCCTTTTCTTAATAGCAAATAAGTTAGGGATGATGAGTGAAGGGTATGCTTGGATTGTGACTTCGAGTAGCATGAATTTATTGCAATCCATGAATTTATCTGTTATCGAGTCAATGCAAGGAGTGCTGGGTTTCAAGTCTTTTATTCCAGCATCAATGAGCCTTCACAGTCTTACTTCAAGACTGAGGACGAAGTTTTACCTGGAGGATCCCAATATGGAAGCAATTCGGGAGTTAAGTGCAGATGGGATCTGGGCATATGATACAACTTGGGCTCTAGCAGAAGCAGTTCAAAGAGCAAGGCTTAAAAATTCTACAACTAGATCCTCCAAAGATGGAGCTGTGCTTCTTAGAGAGATATTGCAGACTAGATTAAAAGGTTTAAGTGGTGAAATTCAATATGTAAATGGGAAATTGATTCCATCAAAACCATTTGAGATAGTTAATGTTATTGGAAAAGGTGAGATAAAAAGGATTGGATTTTGGCCTTGCAAAGAAGAAGTAAAATCCGGAAAATGGTTAACCCATCAGCAGCTTATTCATGGTAGGAGAAATTTAGCTTCTACAATTGATCTTGAAAGAATCATCTGGCCTGGAGGATCCAAGAGGGACTTGAGCAGTAGTGAAACACTTAAACTAAAAATTGGTGTTCCAGTGAGATATGGGTTCAAGGAACTTGTTCGTGTCGAGCATGATCTTGAAACCAATGCAACTCATGTCACTGGCTTCTCAATAGATGTATTCAAAGCTGCAGTAGGAGCTTTGCCGTATGAAGTGCAGTACGAGTTTATTCCATTTGAGGATGCCAATGGAAATCCTGCAGGGACTAATAATGATCTTGTTTACCAGGTTTATCTCAAGGTTTTCCCTAAAGGTTCGAAATTGGTTCATGATTTGTCAAGGCAAATCGAACGTCTAAGACAGGAGGAAAAGCTTATAGAGATGGAGAAGACCTGGTGTCTTAGAAAAACAACTCTCACTTCTGATGAGGATATTAATAAGAAAGATCCCAATACGATTGACCTCTACGACTTCCGCGAGTTGGACTCAATGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

598

Amino Acids

67.33

Weight (kDa)

5.95

Isoelectric Point (pI)

39.07

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 44 - 383 1.6e-10 Periplasmic binding protein
ANF_receptor PF01094 63 - 399 8e-57 Receptor family ligand binding region
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 356
AccII CGCG 2 cut(s) 465, 1779
AccIII TCCGGA 1 cut(s) 1250
AciI CCGC 4 cut(s) 356, 389, 465, 1777
AclWI GGATC 8 cut(s) 166, 944, 957, 998, 1059, 1335, 1348, 1742
AcsI RAATTY 6 cut(s) 628, 817, 835, 1051, 1134, 1294
AcuI CTGAAG 1 cut(s) 501
AfaI GTAC 2 cut(s) 238, 1523
AfiI CCNNNNNNNGG 3 cut(s) 259, 1257, 1783
AhdI GACNNNNNGTC 1 cut(s) 1698
AhlI ACTAGT 1 cut(s) 104
AjnI CCWGG 5 cut(s) 33, 942, 1333, 1587, 1694
AjuI GAANNNNNNNTTGG 2 cut(s) 321, 353
AleI CACNNNNGTG 1 cut(s) 72
Alw21I GWGCWC 2 cut(s) 346, 678
Alw26I GTCTC 1 cut(s) 414
Alw44I GTGCAC 1 cut(s) 342
AlwI GGATC 8 cut(s) 166, 944, 957, 998, 1059, 1335, 1348, 1742
Aor13HI TCCGGA 1 cut(s) 1250
AoxI GGCC 4 cut(s) 36, 198, 1226, 1331
ApaLI GTGCAC 1 cut(s) 342
ApeKI GCWGC 5 cut(s) 186, 296, 476, 1273, 1490
ApoI RAATTY 6 cut(s) 628, 817, 835, 1051, 1134, 1294
ArsI GACNNNNNNTTYG 2 cut(s) 1639, 1671
AseI ATTAAT 1 cut(s) 1737
Asp700I GAANNNNTTC 4 cut(s) 566, 966, 1029, 1419
AspLEI GCGC 2 cut(s) 465, 502
AspS9I GGNCC 1 cut(s) 199
AsuHPI GGTGA 4 cut(s) 284, 479, 1142, 1214
AsuII TTCGAA 1 cut(s) 1619
BaeGI GKGCMC 1 cut(s) 346
BamHI GGATCC 2 cut(s) 949, 1340
BanII GRGCYC 2 cut(s) 678, 1018
BbsI GAAGAC 1 cut(s) 1697
Bbv12I GWGCWC 2 cut(s) 346, 678
BbvI GCAGC 5 cut(s) 173, 283, 463, 1285, 1477
BccI CCATC 7 cut(s) 225, 583, 980, 1070, 1171, 1275, 1678
BceAI ACGGC 1 cut(s) 1492
BciT130I CCWGG 5 cut(s) 35, 944, 1335, 1589, 1696
BclI TGATCA 1 cut(s) 469
BcoDI GTCTC 1 cut(s) 414
BcuI ACTAGT 1 cut(s) 104
BfaI CTAG 4 cut(s) 105, 1019, 1062, 1110
BfmI CTRYAG 3 cut(s) 232, 1491, 1560
BisI GCNGC 6 cut(s) 187, 297, 390, 477, 1274, 1491
BlsI GCNGC 6 cut(s) 188, 298, 391, 478, 1275, 1492
Bme1390I CCNGG 5 cut(s) 35, 944, 1335, 1589, 1696
BmeRI GACNNNNNGTC 1 cut(s) 1698
BmgT120I GGNCC 1 cut(s) 199
BmiI GGNNCC 2 cut(s) 951, 1342
BmrFI CCNGG 5 cut(s) 35, 944, 1335, 1589, 1696
BmsI GCATC 2 cut(s) 902, 1534
BpiI GAAGAC 1 cut(s) 1697
BplI GAGNNNNNCTC 3 cut(s) 234, 266, 1772
BpmI CTGGAG 2 cut(s) 965, 1356
Bpu14I TTCGAA 1 cut(s) 1619
BpuEI CTTGAG 2 cut(s) 1375, 1583
BsaJI CCNNGG 1 cut(s) 301
BsaWI WCCGGW 1 cut(s) 1250
Bsc4I CCNNNNNNNGG 3 cut(s) 259, 1257, 1783
Bse1I ACTGG 2 cut(s) 1394, 1468
BseAI TCCGGA 1 cut(s) 1250
BseBI CCWGG 5 cut(s) 35, 944, 1335, 1589, 1696
BseDI CCNNGG 1 cut(s) 301
BseGI GGATG 4 cut(s) 30, 532, 777, 1549
BseLI CCNNNNNNNGG 3 cut(s) 259, 1257, 1783
BseMII CTCAG 2 cut(s) 196, 917
BseNI ACTGG 2 cut(s) 1394, 1468
BseRI GAGGAG 3 cut(s) 408, 411, 637
BseSI GKGCMC 1 cut(s) 346
BseXI GCAGC 5 cut(s) 173, 283, 463, 1285, 1477
BseYI CCCAGC 1 cut(s) 868
BsgI GTGCAG 2 cut(s) 1002, 1538
Bsh1236I CGCG 2 cut(s) 465, 1779
BshFI GGCC 4 cut(s) 38, 200, 1228, 1333
BsiHKAI GWGCWC 2 cut(s) 346, 678
BsiSI CCGG 1 cut(s) 1251
BslFI GGGAC 2 cut(s) 1364, 1579
BslI CCNNNNNNNGG 3 cut(s) 259, 1257, 1783
BsmAI GTCTC 1 cut(s) 414
BsmFI GGGAC 2 cut(s) 1364, 1579
BsnI GGCC 4 cut(s) 38, 200, 1228, 1333
Bsp119I TTCGAA 1 cut(s) 1619
Bsp1286I GDGCHC 3 cut(s) 346, 678, 1018
Bsp13I TCCGGA 1 cut(s) 1250
BspACI CCGC 4 cut(s) 356, 389, 465, 1777
BspANI GGCC 4 cut(s) 38, 200, 1228, 1333
BspCNI CTCAG 2 cut(s) 195, 918
BspEI TCCGGA 1 cut(s) 1250
BspFNI CGCG 2 cut(s) 465, 1779
BspHI TCATGA 1 cut(s) 1630
BspLI GGNNCC 2 cut(s) 951, 1342
BspMAI CTGCAG 2 cut(s) 1495, 1564
BspPI GGATC 8 cut(s) 166, 944, 957, 998, 1059, 1335, 1348, 1742
BspQI GCTCTTC 1 cut(s) 666
BspT104I TTCGAA 1 cut(s) 1619
BsrBI CCGCTC 1 cut(s) 356
BsrI ACTGG 2 cut(s) 1394, 1468
BssECI CCNNGG 1 cut(s) 301
BssT1I CCWWGG 1 cut(s) 301
Bst2UI CCWGG 5 cut(s) 35, 944, 1335, 1589, 1696
Bst4CI ACNGT 4 cut(s) 28, 236, 257, 911
Bst6I CTCTTC 1 cut(s) 666
BstAPI GCANNNNNTGC 1 cut(s) 865
BstBI TTCGAA 1 cut(s) 1619
BstC8I GCNNGC 2 cut(s) 285, 735
BstDEI CTNAG 5 cut(s) 182, 926, 1091, 1658, 1703
BstF5I GGATG 4 cut(s) 30, 532, 777, 1549
BstFNI CGCG 2 cut(s) 465, 1779
BstHHI GCGC 2 cut(s) 465, 502
BstMAI GTCTC 1 cut(s) 414
BstMWI GCNNNNNNNGC 4 cut(s) 293, 682, 865, 1499
BstNI CCWGG 5 cut(s) 35, 944, 1335, 1589, 1696
BstNSI RCATGY 1 cut(s) 722
BstSCI CCNGG 5 cut(s) 33, 942, 1333, 1587, 1694
BstSFI CTRYAG 3 cut(s) 232, 1491, 1560
BstSLI GKGCMC 1 cut(s) 346
BstUI CGCG 2 cut(s) 465, 1779
BstV1I GCAGC 5 cut(s) 173, 283, 463, 1285, 1477
BstV2I GAAGAC 1 cut(s) 1697
BstX2I RGATCY 5 cut(s) 949, 990, 1064, 1340, 1747
BstYI RGATCY 5 cut(s) 949, 990, 1064, 1340, 1747
BsuRI GGCC 4 cut(s) 38, 200, 1228, 1333
BtsCI GGATG 4 cut(s) 30, 532, 777, 1549
BtsIMutI CAGTG 3 cut(s) 502, 1401, 1461
Cac8I GCNNGC 2 cut(s) 285, 735
CciI TCATGA 1 cut(s) 1630
CfoI GCGC 2 cut(s) 465, 502
Cfr13I GGNCC 1 cut(s) 199
CsiI ACCWGGT 2 cut(s) 1587, 1694
Csp6I GTAC 2 cut(s) 237, 1522
CviQI GTAC 2 cut(s) 237, 1522
DdeI CTNAG 5 cut(s) 182, 926, 1091, 1658, 1703
DriI GACNNNNNGTC 1 cut(s) 1698
Eam1104I CTCTTC 1 cut(s) 666
Eam1105I GACNNNNNGTC 1 cut(s) 1698
EarI CTCTTC 1 cut(s) 666
Ecl136II GAGCTC 1 cut(s) 676
Eco130I CCWWGG 1 cut(s) 301
Eco24I GRGCYC 2 cut(s) 678, 1018
Eco53kI GAGCTC 1 cut(s) 676
Eco57I CTGAAG 1 cut(s) 501
EcoICRI GAGCTC 1 cut(s) 676
EcoRI GAATTC 1 cut(s) 628
EcoRII CCWGG 5 cut(s) 33, 942, 1333, 1587, 1694
EcoT14I CCWWGG 1 cut(s) 301
EcoT38I GRGCYC 2 cut(s) 678, 1018
ErhI CCWWGG 1 cut(s) 301
FalI AAGNNNNNCTT 4 cut(s) 351, 383, 1337, 1369
FaqI GGGAC 2 cut(s) 1364, 1579
FauNDI CATATG 2 cut(s) 729, 1000
FbaI TGATCA 1 cut(s) 469
Fnu4HI GCNGC 6 cut(s) 187, 297, 390, 477, 1274, 1491
FokI GGATG 4 cut(s) 17, 539, 784, 1556
FriOI GRGCYC 2 cut(s) 678, 1018
Fsp4HI GCNGC 6 cut(s) 187, 297, 390, 477, 1274, 1491
FspBI CTAG 4 cut(s) 105, 1019, 1062, 1110
GlaI GCGC 2 cut(s) 464, 501
GluI GCNGC 6 cut(s) 187, 297, 390, 477, 1274, 1491
GsaI CCCAGC 1 cut(s) 872
GsuI CTGGAG 2 cut(s) 965, 1356
HaeIII GGCC 4 cut(s) 38, 200, 1228, 1333
HapII CCGG 1 cut(s) 1251
HhaI GCGC 2 cut(s) 465, 502
Hin6I GCGC 2 cut(s) 463, 500
HinP1I GCGC 2 cut(s) 463, 500
HincII GTYRAC 2 cut(s) 586, 1263
HindII GTYRAC 2 cut(s) 586, 1263
HindIII AAGCTT 1 cut(s) 1673
HinfI GANTC 7 cut(s) 263, 329, 492, 851, 1159, 1323, 1787
HpaI GTTAAC 1 cut(s) 1263
HpaII CCGG 1 cut(s) 1251
HphI GGTGA 4 cut(s) 284, 479, 1142, 1214
Hpy166II GTNNAC 5 cut(s) 275, 344, 586, 1263, 1585
Hpy188I TCNGA 3 cut(s) 208, 426, 1726
Hpy188III TCNNGA 8 cut(s) 11, 149, 921, 971, 1251, 1316, 1439, 1631
Hpy8I GTNNAC 5 cut(s) 275, 344, 586, 1263, 1585
HpyAV CCTTC 3 cut(s) 161, 776, 914
HpyCH4III ACNGT 4 cut(s) 28, 236, 257, 911
HpyCH4IV ACGT 1 cut(s) 1654
HpyF10VI GCNNNNNNNGC 4 cut(s) 293, 682, 865, 1499
HpyF3I CTNAG 5 cut(s) 182, 926, 1091, 1658, 1703
HpySE526I ACGT 1 cut(s) 1654
HspAI GCGC 2 cut(s) 463, 500
Kpn2I TCCGGA 1 cut(s) 1250
Ksp22I TGATCA 1 cut(s) 469
KspAI GTTAAC 1 cut(s) 1263
LguI GCTCTTC 1 cut(s) 666
LmnI GCTCC 3 cut(s) 681, 1079, 1499
Lsp1109I GCAGC 5 cut(s) 173, 283, 463, 1285, 1477
LweI GCATC 2 cut(s) 902, 1534
MabI ACCWGGT 2 cut(s) 1587, 1694
MaeI CTAG 4 cut(s) 105, 1019, 1062, 1110
MaeII ACGT 1 cut(s) 1654
MaeIII GTNAC 5 cut(s) 43, 65, 723, 799, 1459
MbiI CCGCTC 1 cut(s) 356
MboII GAAGA 6 cut(s) 134, 671, 683, 709, 1250, 1702
MfeI CAATTG 1 cut(s) 1308
MflI RGATCY 5 cut(s) 949, 990, 1064, 1340, 1747
MhlI GDGCHC 3 cut(s) 346, 678, 1018
MlyI GAGTC 2 cut(s) 860, 1781
MmeI TCCRAC 1 cut(s) 1764
MroI TCCGGA 1 cut(s) 1250
MroXI GAANNNNTTC 4 cut(s) 566, 966, 1029, 1419
MslI CAYNNNNRTG 6 cut(s) 72, 138, 194, 222, 323, 612
MspA1I CMGCKG 2 cut(s) 186, 296
MspI CCGG 1 cut(s) 1251
MspR9I CCNGG 5 cut(s) 35, 944, 1335, 1589, 1696
MunI CAATTG 1 cut(s) 1308
MvaI CCWGG 5 cut(s) 35, 944, 1335, 1589, 1696
MvnI CGCG 2 cut(s) 465, 1779
MwoI GCNNNNNNNGC 4 cut(s) 293, 682, 865, 1499
NdeI CATATG 2 cut(s) 729, 1000
NlaIV GGNNCC 2 cut(s) 951, 1342
NmuCI GTSAC 5 cut(s) 43, 65, 723, 799, 1459
NspI RCATGY 1 cut(s) 722
NspV TTCGAA 1 cut(s) 1619
OliI CACNNNNGTG 1 cut(s) 72
PagI TCATGA 1 cut(s) 1630
PciSI GCTCTTC 1 cut(s) 666
PcsI WCGNNNNNNNCGW 1 cut(s) 1776
PdmI GAANNNNTTC 4 cut(s) 566, 966, 1029, 1419
PfeI GAWTC 5 cut(s) 263, 329, 492, 1159, 1323
PkrI GCNGC 6 cut(s) 188, 298, 391, 478, 1275, 1492
PleI GAGTC 2 cut(s) 859, 1781
PpsI GAGTC 2 cut(s) 859, 1781
PshBI ATTAAT 1 cut(s) 1737
Psp124BI GAGCTC 1 cut(s) 678
Psp6I CCWGG 5 cut(s) 33, 942, 1333, 1587, 1694
PspFI CCCAGC 1 cut(s) 868
PspGI CCWGG 5 cut(s) 33, 942, 1333, 1587, 1694
PspN4I GGNNCC 2 cut(s) 951, 1342
PspPI GGNCC 1 cut(s) 199
PstI CTGCAG 2 cut(s) 1495, 1564
PsuI RGATCY 5 cut(s) 949, 990, 1064, 1340, 1747
PvuII CAGCTG 2 cut(s) 186, 296
RsaI GTAC 2 cut(s) 238, 1523
RsaNI GTAC 2 cut(s) 237, 1522
RseI CAYNNNNRTG 6 cut(s) 72, 138, 194, 222, 323, 612
SacI GAGCTC 1 cut(s) 678
SapI GCTCTTC 1 cut(s) 666
SatI GCNGC 6 cut(s) 187, 297, 390, 477, 1274, 1491
Sau96I GGNCC 1 cut(s) 199
SbfI CCTGCAGG 1 cut(s) 1564
SchI GAGTC 2 cut(s) 860, 1781
ScrFI CCNGG 5 cut(s) 35, 944, 1335, 1589, 1696
SdaI CCTGCAGG 1 cut(s) 1564
SduI GDGCHC 3 cut(s) 346, 678, 1018
SexAI ACCWGGT 2 cut(s) 1587, 1694
SfaNI GCATC 2 cut(s) 902, 1534
SfcI CTRYAG 3 cut(s) 232, 1491, 1560
SfuI TTCGAA 1 cut(s) 1619
SmiMI CAYNNNNRTG 6 cut(s) 72, 138, 194, 222, 323, 612
SmlI CTYRAG 2 cut(s) 1354, 1598
SmoI CTYRAG 2 cut(s) 1354, 1598
SpeI ACTAGT 1 cut(s) 104
Sse8387I CCTGCAGG 1 cut(s) 1564
SsiI CCGC 4 cut(s) 356, 389, 465, 1777
SspI AATATT 1 cut(s) 637
SspMI CTAG 4 cut(s) 105, 1019, 1062, 1110
SstI GAGCTC 1 cut(s) 678
StyD4I CCNGG 5 cut(s) 33, 942, 1333, 1587, 1694
StyI CCWWGG 1 cut(s) 301
TaaI ACNGT 4 cut(s) 28, 236, 257, 911
TaiI ACGT 1 cut(s) 1657
TaqI TCGA 7 cut(s) 150, 669, 806, 849, 1428, 1619, 1650
TatI WGTACW 1 cut(s) 236
TauI GCSGC 1 cut(s) 392
TfiI GAWTC 5 cut(s) 263, 329, 492, 1159, 1323
TscAI CASTG 3 cut(s) 502, 1401, 1468
TseFI GTSAC 5 cut(s) 43, 65, 723, 799, 1459
TseI GCWGC 5 cut(s) 186, 296, 476, 1273, 1490
Tsp45I GTSAC 5 cut(s) 43, 65, 723, 799, 1459
TspDTI ATGAA 9 cut(s) 122, 559, 609, 672, 830, 848, 1271, 1527, 1619
TspRI CASTG 3 cut(s) 502, 1401, 1468
VneI GTGCAC 1 cut(s) 342
VspI ATTAAT 1 cut(s) 1737
XapI RAATTY 6 cut(s) 628, 817, 835, 1051, 1134, 1294
XceI RCATGY 1 cut(s) 722
XmnI GAANNNNTTC 4 cut(s) 566, 966, 1029, 1419
XspI CTAG 4 cut(s) 105, 1019, 1062, 1110
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.