RLG00000029150

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
33734891 .. 33738872
3982 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029150

Sequence Viewer

Length: 2424 bp
ATGGAGTGTCGAGGGTTGAGGCAAGCAATCATCCCGTCCTTTGTGACCTTCTGTTGCCTTGTTGGTCACTTAAGTGCTGATATTGAGAAGTTAAACTATGATGTTGAAGATCAGGTTCATGTTGGGGTGATTCTCGATATGGAATCAAAAGGAAAGATTGTTCTCAGCTGCATTTCAATGGCCCTCTCTGATTTTTACCATCTCCACAATAACTACAGCACAAGAATAGTTCTCTACAGTAAGGATTCCAAAGGTGAACCTCTGCCTGCTCTGTCAGCTGCTCTTGACTTTTTGGAAAATATCAAAGTGGAAGCAATAATTGGTGCACCAAAAAGAGCAGAAGCAAACCTTCTGGCAGAATTAGGAGAAGCGGCCAAAATCCCTTTAATGTCTCTTTCTCCTGCTCGGACTGACAATAAATATCCCTTCTTTGTTGAGATCATGCATGCTGATGAAGCGGCTGAAGTTAAGGGAATTAGTGCCATTATTGAAGTTTTCAAATGGAGGGATGTCATCCTTTTATATGATAGCAAAGAATATGGGAGAGACTTCATTCCATCATTAGTCAAGTCATTCCAAGAGATCACACATGGGAGTGTTGCGTACAAAAGTTCCAATATTGCTTCCTCCTCATCAAATGAAGAAATCACTGCAGAGCTCCAAAAGTTGATCAACCTGAAGATTAAGGTATTTGTGGTGCATGTGTCACATTTTTTTGCACCTCGTCTTTTCTTGAATGCAAAGAAGTTAGGGATGATGAGCGAAGGGTATGCTTGGATCATGACATCAACTAGCATGAATTTCTTGGATTCTATGAATTTATCTGTTATTGAGTCAATGCAAGGAGTGCTGGGTTTCAAGTCTTCTATTCCAGCATCAATGAACCTTCACAGTCTTACATCAAGATTGAGGAGGAAGTTTTACATGGAGGATCCAAATATGGAAGCAATTCGGGAGTTGAGTGCAGATGGGATCTGGGCATATGATGCAACTTGGGCTCTAGCAGAAGCAGTTGAAAGAGCAAGGCTTAAAAATTCTGACACTAGATCCTCCAAAGATGGAGCTGTGCTTCTTAGAGAGATATTGCAGACCAGATTCAAAGGTTTAAGTGGTGAAATTCAATATGTGAATGGGAAACTGATTCCATCAGAACCATTTGAGATAGTTAATGTTATTGGAAAAGGTGAGATCAAAAGGATTGGATTTTGGCCTTGCAAAGAAGAAGTAAAATCCGGAAAAGGGTCACCCCAGCAGCAACTCATTCATAATGGGAGAAATTTAGCTTCTACAATTGATCTTAAAAGAATCATATGGCCCGGAGGTTCCAGGAGGGAATTGAGTAGTAGTGAAACACTTAAACTAAAAATTGGTGTTCCAGTGAGAATTGGGTTCAAGGAACTTGTTCGTGTCGAGCATGATCTTGAAACCAAAACAACTCATGTCACTGGCTTCTCTATAGATGTATTCAAAGCTGCAATAGGAGCTTTGCCGTATGAAGTGCCATACGAGTTTATTCCATTTGAGGATGCCAATGGAAATCCTGCAGGGACTTATAATGATCTTGTTCACCAGGTTTATCTCAAGAATCAGTTGATCACAAAATTTAATAGATTTGTAGGTCTCCTCGCTCCTATTAAGTTTGCTAAAAAGTTTTGGAATTCGGAAAAGTTGTCAAATAATTTGGCAAAGTTTGTAGTGATCATATGGGTGTTCGTAGTGCTTATATTGTCATCAAGTTATACTGCAACTTTAGCATCAATGATGACGGTCAAACAGATAGAGTTAAACTCGAGAGGGAACTATGTAGGTTATCAATTGGGTTCATTAGGAGTTGTAGTGAACTTAAATTTGAAAGCAGCAAAGTCATATCGTTCAGAAGAAGAATATATTGATGCTCTATCCAAAGGAAGCAAGAATGGTGGAGTTTCTGGGATTATTGACGAGGTTCCGTACATCAATATCTTCCTTGCAAAGTATTCTGCTGACTACTCGATGATTAAAACCAGGGCTATCACCAATGGTTTTGCCTTTGTTTTCCCTAAAGGTTCGAAATTGGTTCACGATGTGTCAAGGCAAATTGAACGTCTGAGACAGGAAGAAAAGCTTCTAGAGATGGAAAAGACCTGGTTTCGTGAAAAAACAACTCTCATGTCTGATGAGGATATGACCCAGAGTGATCCCAATACGATTGACCTCTATGCCTTTCGTGGTCTGTTCCTTATTAGTGGGACATCTTTAGCTATTTCTCTTTTCTTCTTTGTAGTTTTATCCACTAGATTTAGGAATCTGTTTCAAGGACTAATGCAGCTGATTCGTATAGAACTGCAACGTTTGAGAACTTTCTTCTCCTTCATAGTGTTCAATGGAACTGAGCAAAACTGCATGCAAGTTCCTACGCAAGTCATTGTACATGCTGTCCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

808

Amino Acids

90.76

Weight (kDa)

8.63

Isoelectric Point (pI)

37.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 39 - 391 1e-15 Periplasmic binding protein
ANF_receptor PF01094 56 - 392 6e-62 Receptor family ligand binding region
Lig_chan PF00060 554 - 744 7.9e-12 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1554
AccIII TCCGGA 1 cut(s) 1232
AciI CCGC 2 cut(s) 371, 458
AclI AACGTT 1 cut(s) 2329
AclWI GGATC 6 cut(s) 785, 926, 939, 980, 1041, 2171
AcoI YGGCCR 1 cut(s) 372
AcsI RAATTY 8 cut(s) 799, 817, 1033, 1116, 1276, 1601, 1657, 1846
AcuI CTGAAG 2 cut(s) 483, 698
AdeI CACNNNGTG 1 cut(s) 2065
AfaI GTAC 3 cut(s) 605, 1952, 2409
AfiI CCNNNNNNNGG 1 cut(s) 1239
AflII CTTAAG 1 cut(s) 70
AjnI CCWGG 4 cut(s) 1325, 1569, 2003, 2123
AjuI GAANNNNNNNTTGG 2 cut(s) 303, 335
AleI CACNNNNGTG 1 cut(s) 72
AloI GAACNNNNNNTCC 2 cut(s) 144, 176
Alw21I GWGCWC 2 cut(s) 328, 660
Alw26I GTCTC 4 cut(s) 396, 540, 1625, 2083
Alw44I GTGCAC 1 cut(s) 324
AlwI GGATC 6 cut(s) 785, 926, 939, 980, 1041, 2171
Ama87I CYCGRG 1 cut(s) 1789
Aor13HI TCCGGA 1 cut(s) 1232
AoxI GGCC 4 cut(s) 180, 372, 1208, 1313
ApaLI GTGCAC 1 cut(s) 324
ApeKI GCWGC 6 cut(s) 168, 278, 1252, 1472, 1856, 2305
ApoI RAATTY 8 cut(s) 799, 817, 1033, 1116, 1276, 1601, 1657, 1846
ArsI GACNNNNNNTTYG 2 cut(s) 2068, 2100
Asp700I GAANNNNTTC 3 cut(s) 948, 1401, 2103
AspS9I GGNCC 2 cut(s) 181, 1314
AsuC2I CCSGG 1 cut(s) 1317
AsuHPI GGTGA 7 cut(s) 139, 266, 1124, 1196, 1236, 1559, 2005
AsuII TTCGAA 1 cut(s) 2048
AvaI CYCGRG 1 cut(s) 1789
BaeGI GKGCMC 1 cut(s) 328
BamHI GGATCC 1 cut(s) 931
BanII GRGCYC 2 cut(s) 660, 1000
BbsI GAAGAC 1 cut(s) 855
Bbv12I GWGCWC 2 cut(s) 328, 660
BbvI GCAGC 6 cut(s) 155, 265, 1264, 1459, 1868, 2317
BccI CCATC 6 cut(s) 207, 565, 962, 1052, 1153, 2107
BceAI ACGGC 1 cut(s) 1474
BcgI CGANNNNNNTGC 4 cut(s) 752, 786, 2294, 2328
BciT130I CCWGG 4 cut(s) 1327, 1571, 2005, 2125
BclI TGATCA 3 cut(s) 669, 1593, 1698
BcnI CCSGG 1 cut(s) 1317
BcoDI GTCTC 4 cut(s) 396, 540, 1625, 2083
BfaI CTAG 5 cut(s) 792, 1001, 1044, 2108, 2274
BfmI CTRYAG 5 cut(s) 214, 235, 651, 1455, 1542
BfrI CTTAAG 1 cut(s) 70
BisI GCNGC 8 cut(s) 169, 279, 372, 459, 1253, 1473, 1857, 2306
BlsI GCNGC 8 cut(s) 170, 280, 373, 460, 1254, 1474, 1858, 2307
Bme1390I CCNGG 5 cut(s) 1317, 1327, 1571, 2005, 2125
BmeT110I CYCGRG 1 cut(s) 1789
BmgT120I GGNCC 2 cut(s) 181, 1314
BmiI GGNNCC 3 cut(s) 933, 1324, 1947
BmrFI CCNGG 5 cut(s) 1317, 1327, 1571, 2005, 2125
BmsI GCATC 5 cut(s) 884, 976, 1516, 1763, 1882
BpiI GAAGAC 1 cut(s) 855
BplI GAGNNNNNCTC 2 cut(s) 1772, 1804
Bpu14I TTCGAA 1 cut(s) 2048
BpuEI CTTGAG 1 cut(s) 1565
BpuMI CCSGG 1 cut(s) 1317
BsaI GGTCTC 1 cut(s) 1625
BsaJI CCNNGG 1 cut(s) 2004
BsaWI WCCGGW 1 cut(s) 1232
BsaXI ACNNNNNCTCC 2 cut(s) 1821, 1851
Bsc4I CCNNNNNNNGG 1 cut(s) 1239
Bse1I ACTGG 2 cut(s) 1376, 1450
BseAI TCCGGA 1 cut(s) 1232
BseBI CCWGG 4 cut(s) 1327, 1571, 2005, 2125
BseDI CCNNGG 1 cut(s) 2004
BseGI GGATG 5 cut(s) 30, 513, 514, 759, 1531
BseLI CCNNNNNNNGG 1 cut(s) 1239
BseMII CTCAG 3 cut(s) 178, 2078, 2361
BseNI ACTGG 2 cut(s) 1376, 1450
BseRI GAGGAG 3 cut(s) 619, 925, 1613
BseSI GKGCMC 1 cut(s) 328
BseXI GCAGC 6 cut(s) 155, 265, 1264, 1459, 1868, 2317
BseYI CCCAGC 2 cut(s) 850, 1248
BsgI GTGCAG 1 cut(s) 984
BshFI GGCC 4 cut(s) 182, 374, 1210, 1315
BsiHKAI GWGCWC 2 cut(s) 328, 660
BsiHKCI CYCGRG 1 cut(s) 1789
BsiSI CCGG 2 cut(s) 1233, 1317
BslFI GGGAC 2 cut(s) 1561, 2242
BslI CCNNNNNNNGG 1 cut(s) 1239
BsmAI GTCTC 4 cut(s) 396, 540, 1625, 2083
BsmFI GGGAC 2 cut(s) 1561, 2242
BsmI GAATGC 1 cut(s) 742
BsnI GGCC 4 cut(s) 182, 374, 1210, 1315
Bso31I GGTCTC 1 cut(s) 1625
BsoBI CYCGRG 1 cut(s) 1789
Bsp119I TTCGAA 1 cut(s) 2048
Bsp1286I GDGCHC 3 cut(s) 328, 660, 1000
Bsp13I TCCGGA 1 cut(s) 1232
Bsp1407I TGTACA 1 cut(s) 2407
BspACI CCGC 2 cut(s) 371, 458
BspANI GGCC 4 cut(s) 182, 374, 1210, 1315
BspCNI CTCAG 3 cut(s) 177, 2079, 2362
BspEI TCCGGA 1 cut(s) 1232
BspHI TCATGA 1 cut(s) 780
BspLI GGNNCC 3 cut(s) 933, 1324, 1947
BspMAI CTGCAG 2 cut(s) 655, 1546
BspPI GGATC 6 cut(s) 785, 926, 939, 980, 1041, 2171
BspT104I TTCGAA 1 cut(s) 2048
BspTI CTTAAG 1 cut(s) 70
BspTNI GGTCTC 1 cut(s) 1625
BsrGI TGTACA 1 cut(s) 2407
BsrI ACTGG 2 cut(s) 1376, 1450
BssECI CCNNGG 1 cut(s) 2004
Bst2UI CCWGG 4 cut(s) 1327, 1571, 2005, 2125
Bst4CI ACNGT 3 cut(s) 239, 893, 1768
BstAFI CTTAAG 1 cut(s) 70
BstAPI GCANNNNNTGC 2 cut(s) 847, 986
BstAUI TGTACA 1 cut(s) 2407
BstBI TTCGAA 1 cut(s) 2048
BstC8I GCNNGC 4 cut(s) 24, 267, 447, 2384
BstDEI CTNAG 4 cut(s) 164, 1073, 2087, 2370
BstEII GGTNACC 1 cut(s) 1242
BstF5I GGATG 5 cut(s) 30, 513, 514, 759, 1531
BstMAI GTCTC 4 cut(s) 396, 540, 1625, 2083
BstMWI GCNNNNNNNGC 7 cut(s) 275, 455, 847, 986, 995, 1481, 1751
BstNI CCWGG 4 cut(s) 1327, 1571, 2005, 2125
BstNSI RCATGY 4 cut(s) 449, 704, 2386, 2414
BstPI GGTNACC 1 cut(s) 1242
BstSCI CCNGG 5 cut(s) 1315, 1325, 1569, 2003, 2123
BstSFI CTRYAG 5 cut(s) 214, 235, 651, 1455, 1542
BstSLI GKGCMC 1 cut(s) 328
BstV1I GCAGC 6 cut(s) 155, 265, 1264, 1459, 1868, 2317
BstV2I GAAGAC 1 cut(s) 855
BstX2I RGATCY 3 cut(s) 931, 972, 1046
BstYI RGATCY 3 cut(s) 931, 972, 1046
BsuRI GGCC 4 cut(s) 182, 374, 1210, 1315
BtsCI GGATG 5 cut(s) 30, 513, 514, 759, 1531
BtsI GCAGTG 1 cut(s) 648
BtsIMutI CAGTG 3 cut(s) 648, 1383, 1443
Cac8I GCNNGC 4 cut(s) 24, 267, 447, 2384
CciI TCATGA 1 cut(s) 780
Cfr13I GGNCC 2 cut(s) 181, 1314
CsiI ACCWGGT 2 cut(s) 1569, 2123
Csp6I GTAC 3 cut(s) 604, 1951, 2408
CspCI CAANNNNNGTGG 2 cut(s) 1900, 1935
CviQI GTAC 3 cut(s) 604, 1951, 2408
DdeI CTNAG 4 cut(s) 164, 1073, 2087, 2370
DraIII CACNNNGTG 1 cut(s) 2065
EaeI YGGCCR 1 cut(s) 372
Ecl136II GAGCTC 1 cut(s) 658
Eco24I GRGCYC 2 cut(s) 660, 1000
Eco31I GGTCTC 1 cut(s) 1625
Eco53kI GAGCTC 1 cut(s) 658
Eco57I CTGAAG 2 cut(s) 483, 698
Eco88I CYCGRG 1 cut(s) 1789
Eco91I GGTNACC 1 cut(s) 1242
EcoICRI GAGCTC 1 cut(s) 658
EcoO65I GGTNACC 1 cut(s) 1242
EcoRI GAATTC 1 cut(s) 1657
EcoRII CCWGG 4 cut(s) 1325, 1569, 2003, 2123
EcoT22I ATGCAT 1 cut(s) 447
EcoT38I GRGCYC 2 cut(s) 660, 1000
FalI AAGNNNNNCTT 4 cut(s) 333, 365, 2088, 2120
FaqI GGGAC 2 cut(s) 1561, 2242
FauNDI CATATG 3 cut(s) 982, 1310, 1703
FbaI TGATCA 3 cut(s) 669, 1593, 1698
Fnu4HI GCNGC 8 cut(s) 169, 279, 372, 459, 1253, 1473, 1857, 2306
FokI GGATG 5 cut(s) 17, 500, 521, 766, 1538
FriOI GRGCYC 2 cut(s) 660, 1000
Fsp4HI GCNGC 8 cut(s) 169, 279, 372, 459, 1253, 1473, 1857, 2306
FspBI CTAG 5 cut(s) 792, 1001, 1044, 2108, 2274
GluI GCNGC 8 cut(s) 169, 279, 372, 459, 1253, 1473, 1857, 2306
GsaI CCCAGC 2 cut(s) 854, 1252
HaeIII GGCC 4 cut(s) 182, 374, 1210, 1315
HapII CCGG 2 cut(s) 1233, 1317
HindIII AAGCTT 1 cut(s) 2102
HpaII CCGG 2 cut(s) 1233, 1317
HphI GGTGA 7 cut(s) 139, 266, 1124, 1196, 1236, 1559, 2005
Hpy166II GTNNAC 5 cut(s) 257, 326, 1567, 1840, 2059
Hpy188I TCNGA 8 cut(s) 190, 408, 1039, 1150, 1663, 1876, 2088, 2155
Hpy8I GTNNAC 5 cut(s) 257, 326, 1567, 1840, 2059
HpyAV CCTTC 6 cut(s) 58, 359, 436, 758, 896, 2359
HpyCH4III ACNGT 3 cut(s) 239, 893, 1768
HpyCH4IV ACGT 2 cut(s) 2083, 2329
HpyF10VI GCNNNNNNNGC 7 cut(s) 275, 455, 847, 986, 995, 1481, 1751
HpyF3I CTNAG 4 cut(s) 164, 1073, 2087, 2370
HpySE526I ACGT 2 cut(s) 2083, 2329
Kpn2I TCCGGA 1 cut(s) 1232
Ksp22I TGATCA 3 cut(s) 669, 1593, 1698
LmnI GCTCC 4 cut(s) 663, 1061, 1481, 1633
Lsp1109I GCAGC 6 cut(s) 155, 265, 1264, 1459, 1868, 2317
LweI GCATC 5 cut(s) 884, 976, 1516, 1763, 1882
MabI ACCWGGT 2 cut(s) 1569, 2123
MaeI CTAG 5 cut(s) 792, 1001, 1044, 2108, 2274
MaeII ACGT 2 cut(s) 2083, 2329
MaeIII GTNAC 5 cut(s) 43, 65, 705, 1242, 1441
MfeI CAATTG 2 cut(s) 1290, 1814
MflI RGATCY 3 cut(s) 931, 972, 1046
MhlI GDGCHC 3 cut(s) 328, 660, 1000
MlyI GAGTC 1 cut(s) 842
Mph1103I ATGCAT 1 cut(s) 447
MroI TCCGGA 1 cut(s) 1232
MroXI GAANNNNTTC 3 cut(s) 948, 1401, 2103
MslI CAYNNNNRTG 5 cut(s) 72, 176, 450, 594, 1706
MspA1I CMGCKG 3 cut(s) 168, 278, 2308
MspCI CTTAAG 1 cut(s) 70
MspI CCGG 2 cut(s) 1233, 1317
MspR9I CCNGG 5 cut(s) 1317, 1327, 1571, 2005, 2125
MunI CAATTG 2 cut(s) 1290, 1814
Mva1269I GAATGC 1 cut(s) 742
MvaI CCWGG 4 cut(s) 1327, 1571, 2005, 2125
MwoI GCNNNNNNNGC 7 cut(s) 275, 455, 847, 986, 995, 1481, 1751
NciI CCSGG 1 cut(s) 1317
NdeI CATATG 3 cut(s) 982, 1310, 1703
NlaIV GGNNCC 3 cut(s) 933, 1324, 1947
NmuCI GTSAC 5 cut(s) 43, 65, 705, 1242, 1441
NsiI ATGCAT 1 cut(s) 447
NspI RCATGY 4 cut(s) 449, 704, 2386, 2414
NspV TTCGAA 1 cut(s) 2048
OliI CACNNNNGTG 1 cut(s) 72
PaeI GCATGC 2 cut(s) 449, 2386
PaeR7I CTCGAG 1 cut(s) 1789
PagI TCATGA 1 cut(s) 780
PctI GAATGC 1 cut(s) 742
PdmI GAANNNNTTC 3 cut(s) 948, 1401, 2103
PfoI TCCNGGA 1 cut(s) 1325
PkrI GCNGC 8 cut(s) 170, 280, 373, 460, 1254, 1474, 1858, 2307
PleI GAGTC 1 cut(s) 841
PpsI GAGTC 1 cut(s) 841
PsiI TTATAA 1 cut(s) 1554
Psp124BI GAGCTC 1 cut(s) 660
Psp1406I AACGTT 1 cut(s) 2329
Psp6I CCWGG 4 cut(s) 1325, 1569, 2003, 2123
PspEI GGTNACC 1 cut(s) 1242
PspFI CCCAGC 2 cut(s) 850, 1248
PspGI CCWGG 4 cut(s) 1325, 1569, 2003, 2123
PspN4I GGNNCC 3 cut(s) 933, 1324, 1947
PspPI GGNCC 2 cut(s) 181, 1314
PstI CTGCAG 2 cut(s) 655, 1546
PsuI RGATCY 3 cut(s) 931, 972, 1046
PvuII CAGCTG 3 cut(s) 168, 278, 2308
RsaI GTAC 3 cut(s) 605, 1952, 2409
RsaNI GTAC 3 cut(s) 604, 1951, 2408
RseI CAYNNNNRTG 5 cut(s) 72, 176, 450, 594, 1706
SacI GAGCTC 1 cut(s) 660
SatI GCNGC 8 cut(s) 169, 279, 372, 459, 1253, 1473, 1857, 2306
Sau96I GGNCC 2 cut(s) 181, 1314
SbfI CCTGCAGG 1 cut(s) 1546
SchI GAGTC 1 cut(s) 842
ScrFI CCNGG 5 cut(s) 1317, 1327, 1571, 2005, 2125
SdaI CCTGCAGG 1 cut(s) 1546
SduI GDGCHC 3 cut(s) 328, 660, 1000
SexAI ACCWGGT 2 cut(s) 1569, 2123
SfaNI GCATC 5 cut(s) 884, 976, 1516, 1763, 1882
SfcI CTRYAG 5 cut(s) 214, 235, 651, 1455, 1542
Sfr274I CTCGAG 1 cut(s) 1789
SfuI TTCGAA 1 cut(s) 2048
SlaI CTCGAG 1 cut(s) 1789
SmiMI CAYNNNNRTG 5 cut(s) 72, 176, 450, 594, 1706
SmlI CTYRAG 3 cut(s) 70, 1580, 1789
SmoI CTYRAG 3 cut(s) 70, 1580, 1789
SphI GCATGC 2 cut(s) 449, 2386
Sse8387I CCTGCAGG 1 cut(s) 1546
SsiI CCGC 2 cut(s) 371, 458
SspI AATATT 1 cut(s) 619
SspMI CTAG 5 cut(s) 792, 1001, 1044, 2108, 2274
SstI GAGCTC 1 cut(s) 660
StyD4I CCNGG 5 cut(s) 1315, 1325, 1569, 2003, 2123
TaaI ACNGT 3 cut(s) 239, 893, 1768
TaiI ACGT 2 cut(s) 2086, 2332
TaqI TCGA 6 cut(s) 10, 135, 1410, 1790, 1991, 2048
TatI WGTACW 1 cut(s) 2407
TauI GCSGC 2 cut(s) 374, 461
TscAI CASTG 3 cut(s) 655, 1383, 1450
TseFI GTSAC 5 cut(s) 43, 65, 705, 1242, 1441
TseI GCWGC 6 cut(s) 168, 278, 1252, 1472, 1856, 2305
Tsp45I GTSAC 5 cut(s) 43, 65, 705, 1242, 1441
TspGWI ACGGA 1 cut(s) 1938
TspRI CASTG 3 cut(s) 655, 1383, 1450
Vha464I CTTAAG 1 cut(s) 70
VneI GTGCAC 1 cut(s) 324
XapI RAATTY 8 cut(s) 799, 817, 1033, 1116, 1276, 1601, 1657, 1846
XbaI TCTAGA 1 cut(s) 2107
XceI RCATGY 4 cut(s) 449, 704, 2386, 2414
XhoI CTCGAG 1 cut(s) 1789
XmnI GAANNNNTTC 3 cut(s) 948, 1401, 2103
XspI CTAG 5 cut(s) 792, 1001, 1044, 2108, 2274
Zsp2I ATGCAT 1 cut(s) 447
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.