RchiOBHm_Chr1g0341761

Glutamate-gated receptor that probably acts as non- selective cation channel

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
Physical Location & Seq
Reverse (-)
33560757 .. 33564071
3315 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56844

Sequence Viewer

Length: 2580 bp
ATGTGTATCCTCCTCTCTCAACTGAATGCAGCTCTTAATCTATTGGATAAAATCAAAGTAGAAGCTATAATTGGTGCACAAACAAGTATGGAAGCAAGCCTTTTGGCAGAGCTGGGAGAAGCAACTAAGGTCCCTGTAATGTCTCTTTCTCAACCTAGTCATTCTCTTCCATCTAACAAATATTCCTTCTTTGTTGAGATCACACTGGATGAAACTTCTGAAGTTATGGGAATCACTGCTCTTGTTGAAGCTCTCAAATGCAGGGATATTGTTCTTCTATACGAGAACACCAAATATGGGAGAGACATGATTCCATCTTTGATCAATTCCTTCCAACAGAAAAATATCAATATTTCTTATAGAAGTTTCATTGCTCCCACCTCAACAAATGAACAAATCACTGAAGAGCTCCGAAAGCTAAAGGCATTAAACAGTAAAACAATTGTATTGCATGTGTCGCATTTGATCGTACCTCGTATTTTTCTAAATGCAAAGAAGTTAAGAATGATGAGTGAAGATTATGATTGGATTATGACATCAATGAGCATGAATTTCTTACATTCTATCAACTTATCTGTGACTGAGTTAATGCAAGGAGTGGTGGGTTTGAGGTCTTATGTTCCAGCATCAACCACTCTCCACAATCTTACTTCAAGATTAAGGCCGAAATTTTATAAGGAAGAAGAGAAACCCCATGTGGAAGTAAGGGAGTTAAATGCAGATGGAATCCGGGCTTATGATGCAACTTGGGCTCTAGCAGAAGCAGTTGAGAGGTCAAGGAAAAAGTTCTCTACAACTAGGAAACAAAATATTCGACTTAACCCGAGGCATTTGATTGAGAGTAGGTCCTCCAAACATGGTGTTGTGCTTCTTAGAGAGATATTGCAAAGTAGATTAAAAGGTCTACGTGGTGAGATTAAGTACATAAATGGAAGACTATTTTCAGGTGCATTCGAGATAGTAAATGTGATAGGAGAAGGGGAGATCAAAAGGGTTGGACTTTGGCCTTGCGAGAAAAGAAGCATCGAAGAGTGGCACTTGTTCAATAATAGAAGAAGTTTACTTTCCACCCATGATCTTGAAACAAACAAATTTTTTGAAGAATCACCGAGCATCATGAAAGGTTCCAAGAAGCAATTGATGAGTAGTGAAAAAAAACTGAGAATTGGGGTTCCAGTAAAAGTAGGGTTTAAGGAATTTGTGCGTATGGAACATGATATTGAAACCAATACAACTCATATCACTGGCTTCTCGATAGACGTGTTCAAAGCAGCAATCAGAGGTTTACCATACAAAGTGCATTATGAGTTTATTCCATTTGAGGATTCCCACGGAAATATGGCCGGGACTTATAACGATCTGGTCCAGCAAGTTTATCTCAAGAAATACGATGCTGTTGTTGGAGATACGACAATCTCAGCGAACAGATCTTTATATGTGGATTTTACAATACCGTATACTGACTTGGGTGTGGGAGTGTTGGTAAGAAAAGATGAGGAAAACATGTGGGTTTTCTTGAAACCTCTTTCAGCAGATCTTTGGATAACAAGTGCTGCTTTCTTTATCCTGACGGGATTAGTTGTGTGGATAATTGAGCGCCCTATTAACCAAGAATTTCAAGGCTCTCTATCGCAGCAAATAGGAACGATATTCTGGTTCTCCTTCTCAACCCTTGTTTTTGCTCATAGTAAGCACTTAATTACATTTCTTCTAATTATCCTAATAGTTTTTCCTACTCAGCAATACTCATCATCTATATTTATTTTTTACCGGTTTAATCTCCTGCCCAACCCTGGTTCATGGTCAACATTGCTACTTGTTGCAGGGGAGAAGTTGTTAAACAACTTGACAAAGTTTGTAGTGATCATATGGGTGTTTGTAGTGCTTATACTGAGCTCCAGTTACACTGCAAATCTAGCTTCAATGATGACCATGAAACAGATACAAATGAACTCAAAAGTGAACTATATAGTTTATCAAATCAGTTCATTCACCAAACTAGGCTTCATAGACTTTACTTGCAAAGGACTCAAGAAATTTGATCAGACAGAAGAAGCATATGTTGATGCTTTATCAAGAGGCAGTAAGCATGGTGGTGTTTCTGCTATCATTGACGAGATTCCTTACATCAAGATCTTCCTAGCAAAGTATTCCTCCAAGTACTCCATGATTAAAACCAAGTCTACTACCAATGGTTTTGGCTTTGTTTTCCCTAAAGGTTCCAAATTGGTCCATGATATTTCAAGGCAAATTGAAATTTTGAGAGAAGAAGGAAAGCTTGTACAGATGGAAGAGGATTGGTTTCATAGTATAAAAACTGATCTCATGTTTGATGACACAACAAGTGATCCCAATCCACTCAATCTCCACAGCTTCCGGGGTTTATTCCTCGTCAGTGGCGTTTCCTCAGTTGTTGCACTTATCTTGTTCACAATTTTCTTGGTGAAAGAGAAATGGCATGTCGTGAAGACATTCAAAGTTGGATATGTGATCCGAGCACAACTGCAGCATGTAAGAAAATTGCTGTCCACAAAAGTATCCGATGAGAATCATCAAAACTGCATTACAAGTGCTAGCTAG

Protein Analysis

859

Amino Acids

97.87

Weight (kDa)

9.19

Isoelectric Point (pI)

37.44

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 7 - 325 1.5e-53 Receptor family ligand binding region
Peripla_BP_6 PF13458 9 - 267 3.7e-13 Periplasmic binding protein
Lig_chan-Glu_bd PF10613 404 - 498 3.9e-11 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 409 - 769 6.9e-14 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 511 - 567 3.2e-08 Ligand-gated ion channel
Lig_chan PF00060 601 - 801 5.5e-14 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 675, 1353
AccI GTMKAC 3 cut(s) 904, 1457, 2183
AclWI GGATC 2 cut(s) 2342, 2485
AcoI YGGCCR 1 cut(s) 1341
AcsI RAATTY 7 cut(s) 550, 668, 1091, 1196, 1613, 2036, 2256
AcuI CTGAAG 2 cut(s) 240, 423
AfaI GTAC 4 cut(s) 471, 923, 2162, 2283
AfiI CCNNNNNNNGG 2 cut(s) 297, 1793
AflIII ACRYGT 2 cut(s) 1260, 1503
AgeI ACCGGT 1 cut(s) 1770
AjiI CACGTC 1 cut(s) 1261
AjnI CCWGG 1 cut(s) 1792
AjuI GAANNNNNNNTTGG 4 cut(s) 54, 86, 1988, 2020
Alw21I GWGCWC 4 cut(s) 79, 411, 1898, 2500
Alw26I GTCTC 2 cut(s) 147, 297
Alw44I GTGCAC 1 cut(s) 75
AlwI GGATC 2 cut(s) 2342, 2485
Ama87I CYCGRG 1 cut(s) 823
AoxI GGCC 3 cut(s) 662, 1004, 1341
ApaLI GTGCAC 1 cut(s) 75
ApeKI GCWGC 5 cut(s) 29, 1271, 1553, 1633, 2506
ApoI RAATTY 7 cut(s) 550, 668, 1091, 1196, 1613, 2036, 2256
AsiGI ACCGGT 1 cut(s) 1770
Asp700I GAANNNNTTC 2 cut(s) 785, 2471
AspLEI GCGC 1 cut(s) 1599
AspS9I GGNCC 4 cut(s) 130, 846, 1363, 2230
AsuC2I CCSGG 3 cut(s) 731, 1345, 2378
AsuHPI GGTGA 4 cut(s) 923, 1098, 1984, 2455
AsuNHI GCTAGC 1 cut(s) 2573
AvaI CYCGRG 1 cut(s) 823
AvaII GGWCC 4 cut(s) 130, 846, 1363, 2230
BaeGI GKGCMC 1 cut(s) 79
BaeI ACNNNNGTAYC 2 cut(s) 2520, 2553
BanII GRGCYC 3 cut(s) 411, 754, 1898
BbsI GAAGAC 2 cut(s) 940, 2474
Bbv12I GWGCWC 4 cut(s) 79, 411, 1898, 2500
BbvI GCAGC 5 cut(s) 41, 1283, 1540, 1645, 2518
BccI CCATC 4 cut(s) 178, 322, 716, 2281
BciT130I CCWGG 1 cut(s) 1794
BciVI GTATCC 2 cut(s) 17, 2548
BclI TGATCA 3 cut(s) 321, 1863, 2041
BcnI CCSGG 3 cut(s) 731, 1345, 2378
BcoDI GTCTC 2 cut(s) 147, 297
BfaI CTAG 8 cut(s) 156, 755, 798, 1916, 2000, 2141, 2574, 2578
BfmI CTRYAG 1 cut(s) 2504
BfoI RGCGCY 1 cut(s) 1600
BfuI GTATCC 2 cut(s) 17, 2548
BglII AGATCT 3 cut(s) 1427, 1534, 2133
BisI GCNGC 5 cut(s) 30, 1272, 1554, 1634, 2507
BlsI GCNGC 5 cut(s) 31, 1273, 1555, 1635, 2508
BmcAI AGTACT 1 cut(s) 2162
Bme1390I CCNGG 4 cut(s) 731, 1345, 1794, 2378
Bme18I GGWCC 4 cut(s) 130, 846, 1363, 2230
BmeT110I CYCGRG 1 cut(s) 823
BmgBI CACGTC 1 cut(s) 1261
BmgT120I GGNCC 4 cut(s) 130, 846, 1363, 2230
BmiI GGNNCC 4 cut(s) 132, 1126, 1173, 2221
BmrFI CCNGG 4 cut(s) 731, 1345, 1794, 2378
BmsI GCATC 6 cut(s) 635, 730, 1032, 1122, 1381, 2056
BmtI GCTAGC 1 cut(s) 2577
BpiI GAAGAC 2 cut(s) 940, 2474
BpmI CTGGAG 1 cut(s) 1882
BpuEI CTTGAG 2 cut(s) 1364, 2015
BpuMI CCSGG 3 cut(s) 731, 1345, 2378
BsaAI YACGTR 1 cut(s) 908
BsaBI GATNNNNATC 2 cut(s) 2352, 2547
BsaJI CCNNGG 4 cut(s) 824, 1330, 1792, 2377
BsaWI WCCGGW 1 cut(s) 1770
BsaXI ACNNNNNCTCC 6 cut(s) 1467, 1497, 1820, 1850, 2349, 2379
Bsc4I CCNNNNNNNGG 2 cut(s) 297, 1793
Bse118I RCCGGY 1 cut(s) 1770
Bse1I ACTGG 4 cut(s) 210, 1175, 1249, 1899
Bse3DI GCAATG 2 cut(s) 369, 1808
Bse8I GATNNNNATC 2 cut(s) 2352, 2547
BseBI CCWGG 1 cut(s) 1794
BseDI CCNNGG 4 cut(s) 824, 1330, 1792, 2377
BseGI GGATG 1 cut(s) 214
BseJI GATNNNNATC 2 cut(s) 2352, 2547
BseLI CCNNNNNNNGG 2 cut(s) 297, 1793
BseMI GCAATG 2 cut(s) 369, 1808
BseMII CTCAG 6 cut(s) 573, 1151, 1431, 1751, 1883, 2421
BseNI ACTGG 4 cut(s) 210, 1175, 1249, 1899
BseSI GKGCMC 1 cut(s) 79
BseXI GCAGC 5 cut(s) 41, 1283, 1540, 1645, 2518
BseYI CCCAGC 1 cut(s) 112
BshFI GGCC 3 cut(s) 664, 1006, 1343
BshTI ACCGGT 1 cut(s) 1770
BsiHKAI GWGCWC 4 cut(s) 79, 411, 1898, 2500
BsiHKCI CYCGRG 1 cut(s) 823
BsiSI CCGG 4 cut(s) 730, 1344, 1771, 2377
BslFI GGGAC 2 cut(s) 116, 1360
BslI CCNNNNNNNGG 2 cut(s) 297, 1793
BsmAI GTCTC 2 cut(s) 147, 297
BsmFI GGGAC 2 cut(s) 116, 1360
BsmI GAATGC 2 cut(s) 31, 950
BsnI GGCC 3 cut(s) 664, 1006, 1343
BsoBI CYCGRG 1 cut(s) 823
Bsp1286I GDGCHC 5 cut(s) 79, 411, 754, 1898, 2500
Bsp1407I TGTACA 1 cut(s) 2281
BspANI GGCC 3 cut(s) 664, 1006, 1343
BspCNI CTCAG 6 cut(s) 574, 1152, 1430, 1750, 1884, 2420
BspHI TCATGA 1 cut(s) 1116
BspLI GGNNCC 4 cut(s) 132, 1126, 1173, 2221
BspMAI CTGCAG 1 cut(s) 2508
BspOI GCTAGC 1 cut(s) 2577
BspPI GGATC 2 cut(s) 2342, 2485
BspQI GCTCTTC 1 cut(s) 399
BsrDI GCAATG 2 cut(s) 369, 1808
BsrFI RCCGGY 1 cut(s) 1770
BsrGI TGTACA 1 cut(s) 2281
BsrI ACTGG 4 cut(s) 210, 1175, 1249, 1899
BssAI RCCGGY 1 cut(s) 1770
BssECI CCNNGG 4 cut(s) 824, 1330, 1792, 2377
BssNAI GTATAC 1 cut(s) 1458
Bst1107I GTATAC 1 cut(s) 1458
Bst2UI CCWGG 1 cut(s) 1794
Bst4CI ACNGT 2 cut(s) 434, 1455
Bst6I CTCTTC 5 cut(s) 171, 399, 678, 1023, 2286
BstAUI TGTACA 1 cut(s) 2281
BstBAI YACGTR 1 cut(s) 908
BstC8I GCNNGC 2 cut(s) 97, 2575
BstDEI CTNAG 8 cut(s) 126, 582, 872, 1160, 1417, 1737, 1892, 2407
BstDSI CCRYGG 1 cut(s) 1330
BstF5I GGATG 1 cut(s) 214
BstH2I RGCGCY 1 cut(s) 1600
BstHHI GCGC 1 cut(s) 1599
BstMAI GTCTC 2 cut(s) 147, 297
BstMWI GCNNNNNNNGC 5 cut(s) 415, 457, 740, 749, 1916
BstNI CCWGG 1 cut(s) 1794
BstNSI RCATGY 4 cut(s) 455, 1507, 2462, 2513
BstSCI CCNGG 4 cut(s) 729, 1343, 1792, 2376
BstSFI CTRYAG 1 cut(s) 2504
BstSLI GKGCMC 1 cut(s) 79
BstV1I GCAGC 5 cut(s) 41, 1283, 1540, 1645, 2518
BstV2I GAAGAC 2 cut(s) 940, 2474
BstX2I RGATCY 3 cut(s) 1427, 1534, 2133
BstYI RGATCY 3 cut(s) 1427, 1534, 2133
BstZ17I GTATAC 1 cut(s) 1458
BsuI GTATCC 2 cut(s) 17, 2548
BsuRI GGCC 3 cut(s) 664, 1006, 1343
BtgI CCRYGG 1 cut(s) 1330
BtrI CACGTC 1 cut(s) 1261
BtsCI GGATG 1 cut(s) 214
BtsI GCAGTG 2 cut(s) 234, 1905
BtsIMutI CAGTG 6 cut(s) 203, 234, 399, 1242, 1905, 2401
Cac8I GCNNGC 2 cut(s) 97, 2575
CciI TCATGA 1 cut(s) 1116
CfoI GCGC 1 cut(s) 1599
Cfr10I RCCGGY 1 cut(s) 1770
Cfr13I GGNCC 4 cut(s) 130, 846, 1363, 2230
Csp6I GTAC 4 cut(s) 470, 922, 2161, 2282
CspAI ACCGGT 1 cut(s) 1770
CviQI GTAC 4 cut(s) 470, 922, 2161, 2282
DdeI CTNAG 8 cut(s) 126, 582, 872, 1160, 1417, 1737, 1892, 2407
EaeI YGGCCR 1 cut(s) 1341
Eam1104I CTCTTC 5 cut(s) 171, 399, 678, 1023, 2286
EarI CTCTTC 5 cut(s) 171, 399, 678, 1023, 2286
Ecl136II GAGCTC 2 cut(s) 409, 1896
Eco24I GRGCYC 3 cut(s) 411, 754, 1898
Eco47I GGWCC 4 cut(s) 130, 846, 1363, 2230
Eco53kI GAGCTC 2 cut(s) 409, 1896
Eco57I CTGAAG 2 cut(s) 240, 423
Eco88I CYCGRG 1 cut(s) 823
EcoICRI GAGCTC 2 cut(s) 409, 1896
EcoO109I RGGNCCY 2 cut(s) 130, 846
EcoRII CCWGG 1 cut(s) 1792
EcoT38I GRGCYC 3 cut(s) 411, 754, 1898
FalI AAGNNNNNCTT 6 cut(s) 84, 116, 1540, 1572, 2262, 2294
FaqI GGGAC 2 cut(s) 116, 1360
FauNDI CATATG 2 cut(s) 1868, 2059
FbaI TGATCA 3 cut(s) 321, 1863, 2041
FblI GTMKAC 3 cut(s) 904, 1457, 2183
Fnu4HI GCNGC 5 cut(s) 30, 1272, 1554, 1634, 2507
FokI GGATG 1 cut(s) 221
FriOI GRGCYC 3 cut(s) 411, 754, 1898
Fsp4HI GCNGC 5 cut(s) 30, 1272, 1554, 1634, 2507
FspBI CTAG 8 cut(s) 156, 755, 798, 1916, 2000, 2141, 2574, 2578
GlaI GCGC 1 cut(s) 1598
GluI GCNGC 5 cut(s) 30, 1272, 1554, 1634, 2507
GsaI CCCAGC 1 cut(s) 116
GsuI CTGGAG 1 cut(s) 1882
HaeII RGCGCY 1 cut(s) 1600
HaeIII GGCC 3 cut(s) 664, 1006, 1343
HapII CCGG 4 cut(s) 730, 1344, 1771, 2377
HhaI GCGC 1 cut(s) 1599
Hin6I GCGC 1 cut(s) 1597
HinP1I GCGC 1 cut(s) 1597
HincII GTYRAC 1 cut(s) 1806
HindII GTYRAC 1 cut(s) 1806
HindIII AAGCTT 1 cut(s) 2276
HinfI GANTC 8 cut(s) 231, 310, 726, 1103, 1325, 2028, 2119, 2548
HpaII CCGG 4 cut(s) 730, 1344, 1771, 2377
HphI GGTGA 4 cut(s) 923, 1098, 1984, 2455
Hpy188I TCNGA 6 cut(s) 220, 413, 1280, 2046, 2495, 2542
HpyAV CCTTC 5 cut(s) 196, 340, 971, 1672, 2264
HpyCH4III ACNGT 2 cut(s) 434, 1455
HpyCH4IV ACGT 2 cut(s) 907, 1260
HpyF10VI GCNNNNNNNGC 5 cut(s) 415, 457, 740, 749, 1916
HpyF3I CTNAG 8 cut(s) 126, 582, 872, 1160, 1417, 1737, 1892, 2407
HpySE526I ACGT 2 cut(s) 907, 1260
HspAI GCGC 1 cut(s) 1597
Ksp22I TGATCA 3 cut(s) 321, 1863, 2041
LguI GCTCTTC 1 cut(s) 399
LmnI GCTCC 3 cut(s) 379, 414, 1901
Lsp1109I GCAGC 5 cut(s) 41, 1283, 1540, 1645, 2518
LweI GCATC 6 cut(s) 635, 730, 1032, 1122, 1381, 2056
MaeI CTAG 8 cut(s) 156, 755, 798, 1916, 2000, 2141, 2574, 2578
MaeII ACGT 2 cut(s) 907, 1260
MaeIII GTNAC 2 cut(s) 577, 1901
MfeI CAATTG 2 cut(s) 441, 1136
MflI RGATCY 3 cut(s) 1427, 1534, 2133
MhlI GDGCHC 5 cut(s) 79, 411, 754, 1898, 2500
MlyI GAGTC 1 cut(s) 2022
MmeI TCCRAC 4 cut(s) 358, 976, 1381, 2461
MroXI GAANNNNTTC 2 cut(s) 785, 2471
MslI CAYNNNNRTG 2 cut(s) 1871, 2094
MspI CCGG 4 cut(s) 730, 1344, 1771, 2377
MspR9I CCNGG 4 cut(s) 731, 1345, 1794, 2378
MunI CAATTG 2 cut(s) 441, 1136
Mva1269I GAATGC 2 cut(s) 31, 950
MvaI CCWGG 1 cut(s) 1794
MwoI GCNNNNNNNGC 5 cut(s) 415, 457, 740, 749, 1916
NciI CCSGG 3 cut(s) 731, 1345, 2378
NdeI CATATG 2 cut(s) 1868, 2059
NheI GCTAGC 1 cut(s) 2573
NlaIV GGNNCC 4 cut(s) 132, 1126, 1173, 2221
NmuCI GTSAC 1 cut(s) 577
NspI RCATGY 4 cut(s) 455, 1507, 2462, 2513
PagI TCATGA 1 cut(s) 1116
PciI ACATGT 1 cut(s) 1503
PciSI GCTCTTC 1 cut(s) 399
PcsI WCGNNNNNNNCGW 1 cut(s) 2397
PctI GAATGC 2 cut(s) 31, 950
PdmI GAANNNNTTC 2 cut(s) 785, 2471
PfeI GAWTC 7 cut(s) 231, 310, 726, 1103, 1325, 2119, 2548
PinAI ACCGGT 1 cut(s) 1770
PkrI GCNGC 5 cut(s) 31, 1273, 1555, 1635, 2508
PleI GAGTC 1 cut(s) 2022
PpsI GAGTC 1 cut(s) 2022
Ppu21I YACGTR 1 cut(s) 908
PpuMI RGGWCCY 2 cut(s) 130, 846
PscI ACATGT 1 cut(s) 1503
PsiI TTATAA 2 cut(s) 675, 1353
Psp124BI GAGCTC 2 cut(s) 411, 1898
Psp5II RGGWCCY 2 cut(s) 130, 846
Psp6I CCWGG 1 cut(s) 1792
PspFI CCCAGC 1 cut(s) 112
PspGI CCWGG 1 cut(s) 1792
PspN4I GGNNCC 4 cut(s) 132, 1126, 1173, 2221
PspPI GGNCC 4 cut(s) 130, 846, 1363, 2230
PspPPI RGGWCCY 2 cut(s) 130, 846
PstI CTGCAG 1 cut(s) 2508
PsuI RGATCY 3 cut(s) 1427, 1534, 2133
RsaI GTAC 4 cut(s) 471, 923, 2162, 2283
RsaNI GTAC 4 cut(s) 470, 922, 2161, 2282
RseI CAYNNNNRTG 2 cut(s) 1871, 2094
SacI GAGCTC 2 cut(s) 411, 1898
SapI GCTCTTC 1 cut(s) 399
SatI GCNGC 5 cut(s) 30, 1272, 1554, 1634, 2507
Sau96I GGNCC 4 cut(s) 130, 846, 1363, 2230
ScaI AGTACT 1 cut(s) 2162
SchI GAGTC 1 cut(s) 2022
ScrFI CCNGG 4 cut(s) 731, 1345, 1794, 2378
SduI GDGCHC 5 cut(s) 79, 411, 754, 1898, 2500
SfaNI GCATC 6 cut(s) 635, 730, 1032, 1122, 1381, 2056
SfcI CTRYAG 1 cut(s) 2504
SinI GGWCC 4 cut(s) 130, 846, 1363, 2230
SmiMI CAYNNNNRTG 2 cut(s) 1871, 2094
SmlI CTYRAG 2 cut(s) 1379, 2030
SmoI CTYRAG 2 cut(s) 1379, 2030
SspI AATATT 3 cut(s) 182, 352, 811
SspMI CTAG 8 cut(s) 156, 755, 798, 1916, 2000, 2141, 2574, 2578
SstI GAGCTC 2 cut(s) 411, 1898
StyD4I CCNGG 4 cut(s) 729, 1343, 1792, 2376
TaaI ACNGT 2 cut(s) 434, 1455
TaiI ACGT 2 cut(s) 910, 1263
TaqI TCGA 4 cut(s) 814, 954, 1026, 1253
TatI WGTACW 3 cut(s) 921, 2160, 2281
TfiI GAWTC 7 cut(s) 231, 310, 726, 1103, 1325, 2119, 2548
TscAI CASTG 6 cut(s) 210, 241, 406, 1249, 1912, 2401
TseFI GTSAC 1 cut(s) 577
TseI GCWGC 5 cut(s) 29, 1271, 1553, 1633, 2506
Tsp45I GTSAC 1 cut(s) 577
TspGWI ACGGA 1 cut(s) 1347
TspRI CASTG 6 cut(s) 210, 241, 406, 1249, 1912, 2401
VneI GTGCAC 1 cut(s) 75
VpaK11BI GGWCC 4 cut(s) 130, 846, 1363, 2230
XapI RAATTY 7 cut(s) 550, 668, 1091, 1196, 1613, 2036, 2256
XceI RCATGY 4 cut(s) 455, 1507, 2462, 2513
XmiI GTMKAC 3 cut(s) 904, 1457, 2183
XmnI GAANNNNTTC 2 cut(s) 785, 2471
XspI CTAG 8 cut(s) 156, 755, 798, 1916, 2000, 2141, 2574, 2578
ZrmI AGTACT 1 cut(s) 2162
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.