RchiOBHm_Chr1g0342001

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000294
Physical Location & Seq
Reverse (-)
33865591 .. 33869728
4138 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56866

Sequence Viewer

Length: 2673 bp
ATGGAGTTTCAAGAGTTGAGGCAAACAGTCATCCTGGCCTTTGTGACTTTCTGTTGCCTCATTGGTCACTTGTGTGCTGATATTGAAAAAACAAACAGTGATACTAGTCCTGTTGTTGTTGAAGATCAGGTTCATGTCGGTGTCATTCTCGATATGGGATCAAGGGAAGGAAAGATTATTCTCAGCTGCATATCAATGGCCCTCTCTGATTTTTACCATCTGCATGATAACTACAGTACAAGAGTAGTTCTCCACAGTAAGGATTCCAAAGGTGAACCTCTGCCTGCTCTGTCAGCTGCCCTTGGTCTTTTGGAAAACATCAAAGTGGAATCAATAATTGGTGCACAGACAAGAGCAGAAGCAAACCTTTTGGCAGAATTAGGAGAAGCGGCCAAACTGCCTGTAATGTCTCTTTCTCGTCCTCTGACTGACAATAAATATCCTTTCCTCGTTGAGATTATGCGCAGTGATCAAGCTGCTGAAGTTAGGGGAATCAGTGCACTTATTGAAGTATTCAAATGGAGGGATGTTATAATTTTATATGATAACAAAGAATATGAGAAAGACTTCATTCCATCATTAGTCAACTCTTTCCAAGAGATCACACATCGGAGTGTTTCATACAAGAGTTCCAATATTGCTTCCTCCTCATCAAATGAAGAAATCATTGAAGAGCTCCAAAAGCTGACGAGATTGAAGATTAAGGTATTTGTGGTGCATGTGTCACATTTGCTTGCACCACGCCTTTTCTTAATTGCAAATAAGTTAGGGATGATGAGTGAAGGGTATGCTTGGATTGTGACTTCGAGTAGCATGAATTTATTGCAAGCCATGAATTTATCTGTTATCGAGTCAATGCAAGGAGTGCTGGGTTTCAAGTCGTCTATTCCAGCATCAATAAACCTTCACAGTCTTACAACAAGATTGAGGAGGAAGTTTTACATGGAGGATCCAAATATGGAAGCGATTCGGGAGTTGAGTGCAGATGGGATCTGGGCATATGATGCAACTTGGGCTCTAGCAGAAGCAGTTGAAAGAGCAAGGCTTAAAAATTCTACAACTAGATCCTCCAAAGATGGAGCTGTGCTTCTTAATGAGATGTTGCAGACTAGATTTAAAGGTTTAAGTGGTGAAATTCAATATGTGAATGGGAAACTGATTCCATCAGAACCATTTGGGATAGTTAATGTTATTGGAAAAGGTGAGATCAAAAGGATTGGATTTTGGCCTTGCAAAGAAGAAGTAAAATCCAGAAAAGGGTCACCCTATCAGCAGCTTATTCATAGTAGGAGAAATTTAGCTTCTACAATTGATCTTGAAAGAGTCATCTGGCCTGGAGGATCCAAAAGGGAATTGAGTAGTAGTGAAACAATTAAACTAAGAATTGGTGTTCCAGTGAGATTCGGGTTCAAGGAACTTGTTCGTGTTGAGCATGATCTTGAAACCAACACAACTCATGTCACTGGCTTTTCTATAGATGTATTTAAAGCTGCAATTGGAGCTTTGCCGTATGAAGTGCAATACGAGTTTATTCCATTTGAGGATGCCAATGGAAATTCTGCAGGGACTTATAATGATCTTGTTTACCAGGTTTATCTCAAGAAATTCGATGCTGTTGTTGGAGATGTTACTATCACAGAGAACAGATCTCAGTATGTTGATTTTACAATCCCATATACTGACTTAGGTGTGGGAATGTTGGTACCAAATGCCAAGGAAAACATGTGGATTTTCTTTAAACCACTTTCAAAATATCTTTGGATAACAACTGCTGCTTTCTTTATCCTTACTGGCTTTGTTGTCTGGATAATTGAGCATCCTACTAATGAAAACTTCCGAGGCACAGCAGCAGAACAAATTGGAACAGTATTCTGGTTCACCTTCTCTTCTCTTGGGTTCACTTATACGGAGAAGTTGTCAAATAATTTGGCAAAGTTTGTAGTGATCATATGGGTGTTTTTAGTGCTTATATTGTCGTCGACTTACACTGCAACTCTAGCATCAATGATGACAGTCAAACAGATACAGTTAAACTCAAGGGGAAACTATATAGGTTACCAATCGGGTTCCTTAGGAGTTATAGTGAACTTGAATTTCAAAGGGATTAAGCCATATCGTTCAAGTGAGGAGTATTTTGTTGCTTTATCAAAAGGAAGCAAGCATAATGGTGTTTCTGGGGTTATTGACGAGGTTCCATACATCAACATCTTCCTCGCAAACTATTCTGCTGACTACTCGATGATTAAAACCAAGTCTATCACCAATGGTTTTGCCTTTGTTTTCCCTAAAGGTTCGAAACTGGTTCAAGATGTGTCAAGGAAAATTGAACGTCTGAGACAGGAAGAAAAGCTTATAGAGATGGAGAAGACCTGGTTTCTTCGAAAAACAACTCTCATGTCTGATGAGGATATTAATAACAAAGATCCCAATACGATTGACCTCTACGACATCCGCGGTCTATTCGTTATTAGTGGCGCTTCTTTAGCGATTGCTCTTTTCTTATTCATAGTTGTATCCCATAGATTTAGAAATCTGATTAGAGGACTAGTGCAGTTGATTGGAAGACAACTACAGCGTTTAAGGATGTTTGTCTCCAACAAAGTATGCAGTAGAACTGAACAAAACTGCTGCATGTCACTTCCTATGCAATTGTACATATACACTGTCCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

890

Amino Acids

100.42

Weight (kDa)

8.46

Isoelectric Point (pI)

37.1

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 44 - 396 2.2e-10 Periplasmic binding protein
ANF_receptor PF01094 63 - 388 1.2e-56 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 478 - 570 6.9e-11 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 483 - 793 4.3e-13 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 585 - 826 6.9e-25 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 533, 1572
Acc16I TGCGCA 1 cut(s) 464
Acc65I GGTACC 1 cut(s) 1702
AccB1I GGYRCC 1 cut(s) 1702
AccI GTMKAC 1 cut(s) 1979
AccII CGCG 1 cut(s) 2454
AciI CCGC 3 cut(s) 389, 2452, 2454
AclWI GGATC 8 cut(s) 166, 944, 957, 998, 1059, 1335, 1348, 2417
AcoI YGGCCR 1 cut(s) 390
AcsI RAATTY 8 cut(s) 817, 835, 1051, 1134, 1294, 1555, 1604, 2092
AcuI CTGAAG 1 cut(s) 501
AfaI GTAC 3 cut(s) 238, 1704, 2654
AfiI CCNNNNNNNGG 2 cut(s) 259, 1257
AflIII ACRYGT 1 cut(s) 1722
AhlI ACTAGT 2 cut(s) 104, 2545
AjnI CCWGG 4 cut(s) 33, 1333, 1587, 2369
AjuI GAANNNNNNNTTGG 2 cut(s) 321, 353
AleI CACNNNNGTG 1 cut(s) 72
Alw21I GWGCWC 3 cut(s) 346, 502, 678
Alw26I GTCTC 3 cut(s) 414, 2329, 2596
Alw44I GTGCAC 2 cut(s) 342, 498
AlwI GGATC 8 cut(s) 166, 944, 957, 998, 1059, 1335, 1348, 2417
AoxI GGCC 5 cut(s) 36, 198, 390, 1226, 1331
ApaLI GTGCAC 2 cut(s) 342, 498
ApeKI GCWGC 8 cut(s) 186, 296, 476, 1273, 1490, 1772, 1847, 2628
ApoI RAATTY 8 cut(s) 817, 835, 1051, 1134, 1294, 1555, 1604, 2092
AseI ATTAAT 1 cut(s) 2412
Asp700I GAANNNNTTC 3 cut(s) 566, 966, 1419
Asp718I GGTACC 1 cut(s) 1702
AspLEI GCGC 2 cut(s) 465, 2477
AspS9I GGNCC 1 cut(s) 199
AsuHPI GGTGA 6 cut(s) 284, 1142, 1214, 1254, 1870, 2251
AsuII TTCGAA 2 cut(s) 2294, 2380
AxyI CCTNAGG 1 cut(s) 2071
BaeGI GKGCMC 2 cut(s) 346, 502
BamHI GGATCC 2 cut(s) 949, 1340
BanI GGYRCC 1 cut(s) 1702
BanII GRGCYC 2 cut(s) 678, 1018
BbsI GAAGAC 2 cut(s) 2372, 2569
Bbv12I GWGCWC 3 cut(s) 346, 502, 678
BbvI GCAGC 8 cut(s) 173, 283, 463, 1285, 1477, 1759, 1859, 2615
BccI CCATC 6 cut(s) 225, 583, 980, 1070, 1171, 2353
BceAI ACGGC 1 cut(s) 1492
BciT130I CCWGG 4 cut(s) 35, 1335, 1589, 2371
BciVI GTATCC 1 cut(s) 2524
BclI TGATCA 2 cut(s) 469, 1944
BcoDI GTCTC 3 cut(s) 414, 2329, 2596
BcuI ACTAGT 2 cut(s) 104, 2545
BfaI CTAG 6 cut(s) 105, 1019, 1062, 1110, 1997, 2546
BfmI CTRYAG 4 cut(s) 232, 1473, 1560, 2570
BfoI RGCGCY 1 cut(s) 2478
BfuI GTATCC 1 cut(s) 2524
BglII AGATCT 1 cut(s) 1646
BisI GCNGC 9 cut(s) 187, 297, 390, 477, 1274, 1491, 1773, 1848, 2629
BlsI GCNGC 9 cut(s) 188, 298, 391, 478, 1275, 1492, 1774, 1849, 2630
Bme1390I CCNGG 4 cut(s) 35, 1335, 1589, 2371
BmgT120I GGNCC 1 cut(s) 199
BmiI GGNNCC 5 cut(s) 951, 1342, 1704, 2068, 2193
BmrFI CCNGG 4 cut(s) 35, 1335, 1589, 2371
BmsI GCATC 6 cut(s) 902, 994, 1534, 1600, 1825, 2009
BpiI GAAGAC 2 cut(s) 2372, 2569
BplI GAGNNNNNCTC 2 cut(s) 234, 266
BpmI CTGGAG 1 cut(s) 1356
Bpu14I TTCGAA 2 cut(s) 2294, 2380
BpuEI CTTGAG 2 cut(s) 1583, 2020
BsaJI CCNNGG 4 cut(s) 301, 1713, 1837, 2452
BsaXI ACNNNNNCTCC 4 cut(s) 1901, 1931, 2067, 2097
Bsc4I CCNNNNNNNGG 2 cut(s) 259, 1257
Bse1I ACTGG 4 cut(s) 1394, 1468, 1795, 2304
Bse21I CCTNAGG 1 cut(s) 2071
BseBI CCWGG 4 cut(s) 35, 1335, 1589, 2371
BseDI CCNNGG 4 cut(s) 301, 1713, 1837, 2452
BseGI GGATG 7 cut(s) 30, 532, 777, 1549, 1816, 2448, 2589
BseLI CCNNNNNNNGG 2 cut(s) 259, 1257
BseMII CTCAG 3 cut(s) 196, 1664, 2324
BseNI ACTGG 4 cut(s) 1394, 1468, 1795, 2304
BseRI GAGGAG 3 cut(s) 637, 943, 2141
BseSI GKGCMC 2 cut(s) 346, 502
BseXI GCAGC 8 cut(s) 173, 283, 463, 1285, 1477, 1759, 1859, 2615
BseYI CCCAGC 1 cut(s) 868
BsgI GTGCAG 2 cut(s) 1002, 2570
Bsh1236I CGCG 1 cut(s) 2454
BshFI GGCC 5 cut(s) 38, 200, 392, 1228, 1333
BshNI GGYRCC 1 cut(s) 1702
BsiHKAI GWGCWC 3 cut(s) 346, 502, 678
BslFI GGGAC 1 cut(s) 1579
BslI CCNNNNNNNGG 2 cut(s) 259, 1257
BsmAI GTCTC 3 cut(s) 414, 2329, 2596
BsmFI GGGAC 1 cut(s) 1579
BsnI GGCC 5 cut(s) 38, 200, 392, 1228, 1333
Bsp119I TTCGAA 2 cut(s) 2294, 2380
Bsp1286I GDGCHC 4 cut(s) 346, 502, 678, 1018
Bsp1407I TGTACA 1 cut(s) 2652
BspACI CCGC 3 cut(s) 389, 2452, 2454
BspANI GGCC 5 cut(s) 38, 200, 392, 1228, 1333
BspCNI CTCAG 3 cut(s) 195, 1663, 2325
BspFNI CGCG 1 cut(s) 2454
BspLI GGNNCC 5 cut(s) 951, 1342, 1704, 2068, 2193
BspMAI CTGCAG 1 cut(s) 1564
BspPI GGATC 8 cut(s) 166, 944, 957, 998, 1059, 1335, 1348, 2417
BspQI GCTCTTC 1 cut(s) 666
BspT104I TTCGAA 2 cut(s) 2294, 2380
BspT107I GGYRCC 1 cut(s) 1702
BsrGI TGTACA 1 cut(s) 2652
BsrI ACTGG 4 cut(s) 1394, 1468, 1795, 2304
BssECI CCNNGG 4 cut(s) 301, 1713, 1837, 2452
BssT1I CCWWGG 2 cut(s) 301, 1713
Bst2UI CCWGG 4 cut(s) 35, 1335, 1589, 2371
Bst4CI ACNGT 9 cut(s) 28, 98, 236, 257, 911, 1867, 2014, 2028, 2665
Bst6I CTCTTC 2 cut(s) 666, 1891
BstAPI GCANNNNNTGC 2 cut(s) 865, 1004
BstAUI TGTACA 1 cut(s) 2652
BstBI TTCGAA 2 cut(s) 2294, 2380
BstC8I GCNNGC 4 cut(s) 285, 735, 828, 2159
BstDEI CTNAG 6 cut(s) 182, 1379, 1650, 1684, 2071, 2333
BstDSI CCRYGG 1 cut(s) 2452
BstEII GGTNACC 2 cut(s) 1260, 2054
BstF5I GGATG 7 cut(s) 30, 532, 777, 1549, 1816, 2448, 2589
BstFNI CGCG 1 cut(s) 2454
BstH2I RGCGCY 1 cut(s) 2478
BstHHI GCGC 2 cut(s) 465, 2477
BstMAI GTCTC 3 cut(s) 414, 2329, 2596
BstMWI GCNNNNNNNGC 8 cut(s) 293, 682, 865, 1004, 1013, 1499, 1997, 2483
BstNI CCWGG 4 cut(s) 35, 1335, 1589, 2371
BstNSI RCATGY 3 cut(s) 722, 1726, 2635
BstPI GGTNACC 2 cut(s) 1260, 2054
BstSCI CCNGG 4 cut(s) 33, 1333, 1587, 2369
BstSFI CTRYAG 4 cut(s) 232, 1473, 1560, 2570
BstSLI GKGCMC 2 cut(s) 346, 502
BstUI CGCG 1 cut(s) 2454
BstV1I GCAGC 8 cut(s) 173, 283, 463, 1285, 1477, 1759, 1859, 2615
BstV2I GAAGAC 2 cut(s) 2372, 2569
BstX2I RGATCY 6 cut(s) 949, 990, 1064, 1340, 1646, 2422
BstYI RGATCY 6 cut(s) 949, 990, 1064, 1340, 1646, 2422
Bsu36I CCTNAGG 1 cut(s) 2071
BsuI GTATCC 1 cut(s) 2524
BsuRI GGCC 5 cut(s) 38, 200, 392, 1228, 1333
BtgI CCRYGG 1 cut(s) 2452
BtsCI GGATG 7 cut(s) 30, 532, 777, 1549, 1816, 2448, 2589
BtsI GCAGTG 2 cut(s) 472, 1986
BtsIMutI CAGTG 7 cut(s) 103, 472, 502, 1401, 1461, 1986, 2661
Cac8I GCNNGC 4 cut(s) 285, 735, 828, 2159
CfoI GCGC 2 cut(s) 465, 2477
Cfr13I GGNCC 1 cut(s) 199
Cfr42I CCGCGG 1 cut(s) 2455
CsiI ACCWGGT 2 cut(s) 1587, 2369
Csp6I GTAC 3 cut(s) 237, 1703, 2653
CviQI GTAC 3 cut(s) 237, 1703, 2653
DdeI CTNAG 6 cut(s) 182, 1379, 1650, 1684, 2071, 2333
DraI TTTAAA 3 cut(s) 1117, 1486, 1738
EaeI YGGCCR 1 cut(s) 390
Eam1104I CTCTTC 2 cut(s) 666, 1891
EarI CTCTTC 2 cut(s) 666, 1891
Ecl136II GAGCTC 1 cut(s) 676
Eco130I CCWWGG 2 cut(s) 301, 1713
Eco24I GRGCYC 2 cut(s) 678, 1018
Eco53kI GAGCTC 1 cut(s) 676
Eco57I CTGAAG 1 cut(s) 501
Eco81I CCTNAGG 1 cut(s) 2071
Eco91I GGTNACC 2 cut(s) 1260, 2054
EcoICRI GAGCTC 1 cut(s) 676
EcoO65I GGTNACC 2 cut(s) 1260, 2054
EcoRII CCWGG 4 cut(s) 33, 1333, 1587, 2369
EcoT14I CCWWGG 2 cut(s) 301, 1713
EcoT38I GRGCYC 2 cut(s) 678, 1018
ErhI CCWWGG 2 cut(s) 301, 1713
FalI AAGNNNNNCTT 4 cut(s) 351, 383, 2334, 2366
FaqI GGGAC 1 cut(s) 1579
FauNDI CATATG 2 cut(s) 1000, 1949
FbaI TGATCA 2 cut(s) 469, 1944
FblI GTMKAC 1 cut(s) 1979
Fnu4HI GCNGC 9 cut(s) 187, 297, 390, 477, 1274, 1491, 1773, 1848, 2629
FokI GGATG 7 cut(s) 17, 539, 784, 1556, 1803, 2435, 2596
FriOI GRGCYC 2 cut(s) 678, 1018
Fsp4HI GCNGC 9 cut(s) 187, 297, 390, 477, 1274, 1491, 1773, 1848, 2629
FspBI CTAG 6 cut(s) 105, 1019, 1062, 1110, 1997, 2546
FspI TGCGCA 1 cut(s) 464
GlaI GCGC 2 cut(s) 464, 2476
GluI GCNGC 9 cut(s) 187, 297, 390, 477, 1274, 1491, 1773, 1848, 2629
GsaI CCCAGC 1 cut(s) 872
GsuI CTGGAG 1 cut(s) 1356
HaeII RGCGCY 1 cut(s) 2478
HaeIII GGCC 5 cut(s) 38, 200, 392, 1228, 1333
HhaI GCGC 2 cut(s) 465, 2477
Hin6I GCGC 2 cut(s) 463, 2475
HinP1I GCGC 2 cut(s) 463, 2475
HincII GTYRAC 2 cut(s) 586, 1980
HindII GTYRAC 2 cut(s) 586, 1980
HindIII AAGCTT 1 cut(s) 2348
HinfI GANTC 8 cut(s) 263, 329, 492, 851, 967, 1159, 1323, 1401
HphI GGTGA 6 cut(s) 284, 1142, 1214, 1254, 1870, 2251
Hpy166II GTNNAC 9 cut(s) 275, 344, 500, 586, 1585, 1878, 1899, 1980, 2086
Hpy188I TCNGA 9 cut(s) 208, 426, 612, 1168, 1838, 2334, 2401, 2535, 2669
Hpy188III TCNNGA 9 cut(s) 11, 149, 971, 1251, 1316, 1439, 1600, 1804, 2306
Hpy8I GTNNAC 9 cut(s) 275, 344, 500, 586, 1585, 1878, 1899, 1980, 2086
Hpy99I CGWCG 1 cut(s) 1981
HpyAV CCTTC 4 cut(s) 161, 776, 914, 1891
HpyCH4III ACNGT 9 cut(s) 28, 98, 236, 257, 911, 1867, 2014, 2028, 2665
HpyCH4IV ACGT 1 cut(s) 2329
HpyF10VI GCNNNNNNNGC 8 cut(s) 293, 682, 865, 1004, 1013, 1499, 1997, 2483
HpyF3I CTNAG 6 cut(s) 182, 1379, 1650, 1684, 2071, 2333
HpySE526I ACGT 1 cut(s) 2329
HspAI GCGC 2 cut(s) 463, 2475
KpnI GGTACC 1 cut(s) 1706
Ksp22I TGATCA 2 cut(s) 469, 1944
KspI CCGCGG 1 cut(s) 2455
LguI GCTCTTC 1 cut(s) 666
LmnI GCTCC 3 cut(s) 681, 1079, 1499
Lsp1109I GCAGC 8 cut(s) 173, 283, 463, 1285, 1477, 1759, 1859, 2615
LweI GCATC 6 cut(s) 902, 994, 1534, 1600, 1825, 2009
MabI ACCWGGT 2 cut(s) 1587, 2369
MaeI CTAG 6 cut(s) 105, 1019, 1062, 1110, 1997, 2546
MaeII ACGT 1 cut(s) 2329
MaeIII GTNAC 9 cut(s) 43, 65, 723, 799, 1260, 1459, 1627, 2054, 2634
MfeI CAATTG 3 cut(s) 1308, 1494, 2648
MflI RGATCY 6 cut(s) 949, 990, 1064, 1340, 1646, 2422
MhlI GDGCHC 4 cut(s) 346, 502, 678, 1018
MlyI GAGTC 2 cut(s) 860, 1332
MmeI TCCRAC 2 cut(s) 1600, 2619
MroXI GAANNNNTTC 3 cut(s) 566, 966, 1419
MslI CAYNNNNRTG 8 cut(s) 72, 138, 194, 222, 323, 612, 1952, 2166
MspA1I CMGCKG 3 cut(s) 186, 296, 2454
MspR9I CCNGG 4 cut(s) 35, 1335, 1589, 2371
MunI CAATTG 3 cut(s) 1308, 1494, 2648
MvaI CCWGG 4 cut(s) 35, 1335, 1589, 2371
MvnI CGCG 1 cut(s) 2454
MwoI GCNNNNNNNGC 8 cut(s) 293, 682, 865, 1004, 1013, 1499, 1997, 2483
NdeI CATATG 2 cut(s) 1000, 1949
NlaIV GGNNCC 5 cut(s) 951, 1342, 1704, 2068, 2193
NmuCI GTSAC 7 cut(s) 43, 65, 723, 799, 1260, 1459, 2634
NsbI TGCGCA 1 cut(s) 464
NspI RCATGY 3 cut(s) 722, 1726, 2635
NspV TTCGAA 2 cut(s) 2294, 2380
OliI CACNNNNGTG 1 cut(s) 72
PciI ACATGT 1 cut(s) 1722
PciSI GCTCTTC 1 cut(s) 666
PdmI GAANNNNTTC 3 cut(s) 566, 966, 1419
PfeI GAWTC 6 cut(s) 263, 329, 492, 967, 1159, 1401
PkrI GCNGC 9 cut(s) 188, 298, 391, 478, 1275, 1492, 1774, 1849, 2630
PleI GAGTC 2 cut(s) 859, 1331
PpsI GAGTC 2 cut(s) 859, 1331
PscI ACATGT 1 cut(s) 1722
PshBI ATTAAT 1 cut(s) 2412
PsiI TTATAA 2 cut(s) 533, 1572
Psp124BI GAGCTC 1 cut(s) 678
Psp6I CCWGG 4 cut(s) 33, 1333, 1587, 2369
PspEI GGTNACC 2 cut(s) 1260, 2054
PspFI CCCAGC 1 cut(s) 868
PspGI CCWGG 4 cut(s) 33, 1333, 1587, 2369
PspN4I GGNNCC 5 cut(s) 951, 1342, 1704, 2068, 2193
PspPI GGNCC 1 cut(s) 199
PstI CTGCAG 1 cut(s) 1564
PsuI RGATCY 6 cut(s) 949, 990, 1064, 1340, 1646, 2422
PvuII CAGCTG 2 cut(s) 186, 296
RsaI GTAC 3 cut(s) 238, 1704, 2654
RsaNI GTAC 3 cut(s) 237, 1703, 2653
RseI CAYNNNNRTG 8 cut(s) 72, 138, 194, 222, 323, 612, 1952, 2166
SacI GAGCTC 1 cut(s) 678
SacII CCGCGG 1 cut(s) 2455
SalI GTCGAC 1 cut(s) 1978
SapI GCTCTTC 1 cut(s) 666
SatI GCNGC 9 cut(s) 187, 297, 390, 477, 1274, 1491, 1773, 1848, 2629
Sau96I GGNCC 1 cut(s) 199
SchI GAGTC 2 cut(s) 860, 1332
ScrFI CCNGG 4 cut(s) 35, 1335, 1589, 2371
SduI GDGCHC 4 cut(s) 346, 502, 678, 1018
SexAI ACCWGGT 2 cut(s) 1587, 2369
SfaNI GCATC 6 cut(s) 902, 994, 1534, 1600, 1825, 2009
SfcI CTRYAG 4 cut(s) 232, 1473, 1560, 2570
Sfr303I CCGCGG 1 cut(s) 2455
SfuI TTCGAA 2 cut(s) 2294, 2380
SgrBI CCGCGG 1 cut(s) 2455
SmiMI CAYNNNNRTG 8 cut(s) 72, 138, 194, 222, 323, 612, 1952, 2166
SmlI CTYRAG 2 cut(s) 1598, 2035
SmoI CTYRAG 2 cut(s) 1598, 2035
SpeI ACTAGT 2 cut(s) 104, 2545
SsiI CCGC 3 cut(s) 389, 2452, 2454
SspI AATATT 1 cut(s) 637
SspMI CTAG 6 cut(s) 105, 1019, 1062, 1110, 1997, 2546
SstI GAGCTC 1 cut(s) 678
StyD4I CCNGG 4 cut(s) 33, 1333, 1587, 2369
StyI CCWWGG 2 cut(s) 301, 1713
TaaI ACNGT 9 cut(s) 28, 98, 236, 257, 911, 1867, 2014, 2028, 2665
TaiI ACGT 1 cut(s) 2332
TaqI TCGA 8 cut(s) 150, 806, 849, 1608, 1979, 2237, 2294, 2380
TatI WGTACW 2 cut(s) 236, 2652
TauI GCSGC 1 cut(s) 392
TfiI GAWTC 6 cut(s) 263, 329, 492, 967, 1159, 1401
TscAI CASTG 7 cut(s) 103, 472, 502, 1401, 1468, 1993, 2668
TseFI GTSAC 7 cut(s) 43, 65, 723, 799, 1260, 1459, 2634
TseI GCWGC 8 cut(s) 186, 296, 476, 1273, 1490, 1772, 1847, 2628
Tsp45I GTSAC 7 cut(s) 43, 65, 723, 799, 1260, 1459, 2634
TspGWI ACGGA 1 cut(s) 1922
TspRI CASTG 7 cut(s) 103, 472, 502, 1401, 1468, 1993, 2668
VneI GTGCAC 2 cut(s) 342, 498
VspI ATTAAT 1 cut(s) 2412
XapI RAATTY 8 cut(s) 817, 835, 1051, 1134, 1294, 1555, 1604, 2092
XceI RCATGY 3 cut(s) 722, 1726, 2635
XmiI GTMKAC 1 cut(s) 1979
XmnI GAANNNNTTC 3 cut(s) 566, 966, 1419
XspI CTAG 6 cut(s) 105, 1019, 1062, 1110, 1997, 2546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.