Rh5CG452600

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
OG0000294
Physical Location & Seq
Forward (+)
63057517 .. 63061255
3739 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG452600.1

Sequence Viewer

Length: 1632 bp
ATGTCAGCTGCTCTTAGTCTGTTGGATAACATCAAAGTGGAAGCAATAATTGGTGCACGAACTAAAACAGAGGCAAACCTTTTGGCAGAACTAGGAGAAGCGGTTCAACTCCCCGTCATGTCTTTTTCTCCTTCCTTCACTGACAATAAATATGCCTTCTTTGTTGAGATCATGAGCGCTAATCAAGCTGCTGAAGTTAAGGGAATCAGTGCCCTTGTTGATGTTTTCAAATGGAGGGATATTATCCTTCTATATGATAACAAAGAATATGAGAGAGACTTCATTCCATCATTAGTCAACTCCTTCCAAGAGATCACACATGGGAGTATCGACTGCAAAAGTTCAAATATTGCTTCCTCATCATCAAATGAAGAAATCATGGAAGAGCTCCAAAAGCTGATGAAACTGAAGATTAAGGTATTTGTGGTGCAGGTGTCACATTTGCTTGCACCTCGCCTTTTCTTATGTGCAAATAAGTTGGGGATGATGATTGAAGGGTATACTTGGATTATGACATCAACTAGCATGAATTTCTTAAATTCCATGGATTTGTCTGTTATTGAGTCAATGCAAGGAGTGCTGGGGTTCAGATCTTCTATTCCAGCATCATTGAGCCTTCATAGTCTTACTTCAAGATTAAGGAGAAAGTTTCAACTGGAGGATCCCACTATGGAAGCAATTCGAGAGTTAAGCGCAGAAGGAATCTGGGCGTATGATGCAACTTGGGCTCTAGCAGAAGCAGTTGAAAGAGCAAGGCCTAAAAATTCTACCACTAGATCCTCCAAAGGAGTTGTGGTTCTCAGAGAGATAATGCAAAGTAGATTTAATGGTTTAAGTGGTGAAATTCATTATCTAAATGGGAAATTGATTTCATCAGAACCATTTGAGATAGTTAATGTTATAGGAGAAGGGGAGATCAAAAGCATTGGATTTTGGCCTTGCAAAGAGGAACAAAAAACCAGAAAAGGGTCACCCAGCAGCACCTTAATTACTAATGATTGGAAAATTTTAGTTTCAACTATTGATATCGGAAAAATCATATGGCCTGGAGGATCCAAGAGGGAATCATCAATACATAAAATTAGAAAACTAAGAATTGGTGTTCCAGTGAGAATCGGGTTCAAGGAACTTGTTCGTATCGAGCGTGATCTTGAAATCAATAAAACTCATGTCACTGGCTTCTCTATAGATGTATTCAAAGCTGCAATAGGAGCTTTGTCTTATGAAGAGGATGTGGATTACGAGTTTATTCCATTTGAGGATGCCAATGGAAACCCTGCTGGTAGTTACAATGATCTTGTGCACCAGGTTTATCTTGAGAAATACGATGCTGCTGTTGGAGATATCACGATCACGTCAAACAGATCTCAATATGTTGATTTTACACTGCCATATACCGATTTTGGTTTGGGATTGTTGGTACGAAATGAAAAGAACATGCGGATTTTCTTCAAACCACTTTCCCCATATCTCTGGATTACAAGTGCTGCTTTCTTTGTCCTAACCGGCTGTGTTGTTTGGATAATTGAGGGTCCTACTAACGAAGAATTCCAAGGCACAGCAGAGGAGCAAATTGGAACAGTAATGTGGTTCTCCTTCTCAACTCTTGTGTTTGCTCTTGGTAAGCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

543

Amino Acids

60.9

Weight (kDa)

5.53

Isoelectric Point (pI)

38.65

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 2 - 301 2.2e-46 Receptor family ligand binding region
Peripla_BP_6 PF13458 2 - 282 4.3e-07 Periplasmic binding protein
Lig_chan-Glu_bd PF10613 384 - 477 7.7e-11 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 389 - 479 5.3e-07 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 491 - 539 1.6e-06 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 421
Acc36I ACCTGC 1 cut(s) 421
AccI GTMKAC 1 cut(s) 500
AciI CCGC 2 cut(s) 101, 1441
AclWI GGATC 5 cut(s) 656, 669, 771, 1047, 1060
AcsI RAATTY 6 cut(s) 529, 538, 763, 843, 1005, 1547
AcuI CTGAAG 2 cut(s) 213, 428
AfaI GTAC 1 cut(s) 1422
AfeI AGCGCT 1 cut(s) 178
AfiI CCNNNNNNNGG 1 cut(s) 966
AjiI CACGTC 1 cut(s) 1356
AjnI CCWGG 2 cut(s) 1045, 1305
AjuI GAANNNNNNNTTGG 2 cut(s) 33, 65
AloI GAACNNNNNNTCC 4 cut(s) 87, 119, 780, 812
AluBI AGCT 6 cut(s) 8, 188, 388, 397, 1202, 1214
AluI AGCT 6 cut(s) 8, 188, 388, 397, 1202, 1214
Alw21I GWGCWC 3 cut(s) 58, 390, 1305
Alw26I GTCTC 1 cut(s) 270
Alw44I GTGCAC 2 cut(s) 54, 1301
AlwI GGATC 5 cut(s) 656, 669, 771, 1047, 1060
Aor51HI AGCGCT 1 cut(s) 178
AoxI GGCC 3 cut(s) 755, 935, 1043
ApaLI GTGCAC 2 cut(s) 54, 1301
ApeKI GCWGC 6 cut(s) 8, 188, 978, 1202, 1331, 1487
ApoI RAATTY 6 cut(s) 529, 538, 763, 843, 1005, 1547
Asp700I GAANNNNTTC 3 cut(s) 102, 678, 1131
AspLEI GCGC 2 cut(s) 179, 695
AspS9I GGNCC 1 cut(s) 1532
AsuHPI GGTGA 2 cut(s) 851, 963
AvaII GGWCC 1 cut(s) 1532
BaeGI GKGCMC 3 cut(s) 58, 214, 1305
BamHI GGATCC 2 cut(s) 661, 1052
BanII GRGCYC 2 cut(s) 390, 730
Bbv12I GWGCWC 3 cut(s) 58, 390, 1305
BbvI GCAGC 5 cut(s) 175, 990, 1189, 1318, 1474
BccI CCATC 1 cut(s) 295
BciT130I CCWGG 2 cut(s) 1047, 1307
BcoDI GTCTC 1 cut(s) 270
BfaI CTAG 4 cut(s) 92, 522, 731, 774
BfmI CTRYAG 1 cut(s) 1185
BfoI RGCGCY 1 cut(s) 180
BfuAI ACCTGC 1 cut(s) 421
BglII AGATCT 2 cut(s) 590, 1364
BisI GCNGC 6 cut(s) 9, 189, 979, 1203, 1332, 1488
BlsI GCNGC 6 cut(s) 10, 190, 980, 1204, 1333, 1489
Bme1390I CCNGG 2 cut(s) 1047, 1307
Bme18I GGWCC 1 cut(s) 1532
BmgBI CACGTC 1 cut(s) 1356
BmgT120I GGNCC 1 cut(s) 1532
BmiI GGNNCC 3 cut(s) 663, 1054, 1533
BmrFI CCNGG 2 cut(s) 1047, 1307
BmsI GCATC 4 cut(s) 614, 706, 1252, 1318
BpmI CTGGAG 2 cut(s) 677, 1068
BpuEI CTTGAG 1 cut(s) 1337
BsaJI CCNNGG 2 cut(s) 543, 1552
BsaXI ACNNNNNCTCC 4 cut(s) 87, 117, 780, 810
Bsc4I CCNNNNNNNGG 1 cut(s) 966
Bse118I RCCGGY 1 cut(s) 1505
Bse1I ACTGG 3 cut(s) 660, 1106, 1180
BseBI CCWGG 2 cut(s) 1047, 1307
BseDI CCNNGG 2 cut(s) 543, 1552
BseGI GGATG 3 cut(s) 489, 1237, 1267
BseLI CCNNNNNNNGG 1 cut(s) 966
BseMII CTCAG 1 cut(s) 814
BseNI ACTGG 3 cut(s) 660, 1106, 1180
BseRI GAGGAG 1 cut(s) 1580
BseSI GKGCMC 3 cut(s) 58, 214, 1305
BseXI GCAGC 5 cut(s) 175, 990, 1189, 1318, 1474
BseYI CCCAGC 2 cut(s) 580, 974
BsgI GTGCAG 1 cut(s) 449
BshFI GGCC 3 cut(s) 757, 937, 1045
BsiHKAI GWGCWC 3 cut(s) 58, 390, 1305
BsiSI CCGG 1 cut(s) 1506
BslI CCNNNNNNNGG 1 cut(s) 966
BsmAI GTCTC 1 cut(s) 270
BsnI GGCC 3 cut(s) 757, 937, 1045
Bsp1286I GDGCHC 5 cut(s) 58, 214, 390, 730, 1305
Bsp19I CCATGG 1 cut(s) 543
BspACI CCGC 2 cut(s) 101, 1441
BspANI GGCC 3 cut(s) 757, 937, 1045
BspCNI CTCAG 1 cut(s) 813
BspHI TCATGA 1 cut(s) 171
BspLI GGNNCC 3 cut(s) 663, 1054, 1533
BspMI ACCTGC 1 cut(s) 421
BspPI GGATC 5 cut(s) 656, 669, 771, 1047, 1060
BspQI GCTCTTC 1 cut(s) 378
BsrFI RCCGGY 1 cut(s) 1505
BsrI ACTGG 3 cut(s) 660, 1106, 1180
BssAI RCCGGY 1 cut(s) 1505
BssECI CCNNGG 2 cut(s) 543, 1552
BssNAI GTATAC 1 cut(s) 501
BssT1I CCWWGG 2 cut(s) 543, 1552
Bst1107I GTATAC 1 cut(s) 501
Bst2UI CCWGG 2 cut(s) 1047, 1307
Bst4CI ACNGT 1 cut(s) 1582
Bst6I CTCTTC 2 cut(s) 378, 1221
BstAPI GCANNNNNTGC 1 cut(s) 577
BstC8I GCNNGC 1 cut(s) 447
BstDEI CTNAG 3 cut(s) 14, 800, 1091
BstDSI CCRYGG 1 cut(s) 543
BstEII GGTNACC 1 cut(s) 969
BstF5I GGATG 3 cut(s) 489, 1237, 1267
BstH2I RGCGCY 1 cut(s) 180
BstHHI GCGC 2 cut(s) 179, 695
BstMAI GTCTC 1 cut(s) 270
BstMWI GCNNNNNNNGC 6 cut(s) 185, 394, 577, 716, 725, 1211
BstNI CCWGG 2 cut(s) 1047, 1307
BstNSI RCATGY 1 cut(s) 1441
BstPI GGTNACC 1 cut(s) 969
BstSCI CCNGG 2 cut(s) 1045, 1305
BstSFI CTRYAG 1 cut(s) 1185
BstSLI GKGCMC 3 cut(s) 58, 214, 1305
BstV1I GCAGC 5 cut(s) 175, 990, 1189, 1318, 1474
BstX2I RGATCY 5 cut(s) 590, 661, 776, 1052, 1364
BstXI CCANNNNNNTGG 1 cut(s) 1473
BstYI RGATCY 5 cut(s) 590, 661, 776, 1052, 1364
BstZ17I GTATAC 1 cut(s) 501
BsuRI GGCC 3 cut(s) 757, 937, 1045
BtgI CCRYGG 1 cut(s) 543
BtrI CACGTC 1 cut(s) 1356
BtsCI GGATG 3 cut(s) 489, 1237, 1267
BtsI GCAGTG 1 cut(s) 1385
BtsIMutI CAGTG 5 cut(s) 138, 214, 1113, 1173, 1385
BveI ACCTGC 1 cut(s) 421
Cac8I GCNNGC 1 cut(s) 447
CciI TCATGA 1 cut(s) 171
CfoI GCGC 2 cut(s) 179, 695
Cfr10I RCCGGY 1 cut(s) 1505
Cfr13I GGNCC 1 cut(s) 1532
CsiI ACCWGGT 1 cut(s) 1305
Csp6I GTAC 1 cut(s) 1421
CviAII CATG 8 cut(s) 118, 172, 320, 379, 526, 544, 1169, 1438
CviQI GTAC 1 cut(s) 1421
DdeI CTNAG 3 cut(s) 14, 800, 1091
Eam1104I CTCTTC 2 cut(s) 378, 1221
EarI CTCTTC 2 cut(s) 378, 1221
Ecl136II GAGCTC 1 cut(s) 388
Eco130I CCWWGG 2 cut(s) 543, 1552
Eco147I AGGCCT 1 cut(s) 757
Eco24I GRGCYC 2 cut(s) 390, 730
Eco32I GATATC 2 cut(s) 1027, 1345
Eco47I GGWCC 1 cut(s) 1532
Eco47III AGCGCT 1 cut(s) 178
Eco53kI GAGCTC 1 cut(s) 388
Eco57I CTGAAG 2 cut(s) 213, 428
Eco91I GGTNACC 1 cut(s) 969
EcoICRI GAGCTC 1 cut(s) 388
EcoO109I RGGNCCY 1 cut(s) 1532
EcoO65I GGTNACC 1 cut(s) 969
EcoRI GAATTC 1 cut(s) 1547
EcoRII CCWGG 2 cut(s) 1045, 1305
EcoRV GATATC 2 cut(s) 1027, 1345
EcoT14I CCWWGG 2 cut(s) 543, 1552
EcoT38I GRGCYC 2 cut(s) 390, 730
ErhI CCWWGG 2 cut(s) 543, 1552
FaeI CATG 8 cut(s) 121, 175, 323, 382, 529, 547, 1172, 1441
FalI AAGNNNNNCTT 2 cut(s) 1474, 1506
FatI CATG 8 cut(s) 117, 171, 319, 378, 525, 543, 1168, 1437
FauNDI CATATG 1 cut(s) 1040
FblI GTMKAC 1 cut(s) 500
Fnu4HI GCNGC 6 cut(s) 9, 189, 979, 1203, 1332, 1488
FokI GGATG 3 cut(s) 496, 1244, 1274
FriOI GRGCYC 2 cut(s) 390, 730
Fsp4HI GCNGC 6 cut(s) 9, 189, 979, 1203, 1332, 1488
FspBI CTAG 4 cut(s) 92, 522, 731, 774
GlaI GCGC 2 cut(s) 178, 694
GluI GCNGC 6 cut(s) 9, 189, 979, 1203, 1332, 1488
GsaI CCCAGC 2 cut(s) 584, 978
GsuI CTGGAG 2 cut(s) 677, 1068
HaeII RGCGCY 1 cut(s) 180
HaeIII GGCC 3 cut(s) 757, 937, 1045
HapII CCGG 1 cut(s) 1506
HhaI GCGC 2 cut(s) 179, 695
Hin1II CATG 8 cut(s) 121, 175, 323, 382, 529, 547, 1172, 1441
Hin6I GCGC 2 cut(s) 177, 693
HinP1I GCGC 2 cut(s) 177, 693
HincII GTYRAC 1 cut(s) 298
HindII GTYRAC 1 cut(s) 298
HinfI GANTC 5 cut(s) 204, 563, 702, 1064, 1113
HpaII CCGG 1 cut(s) 1506
HphI GGTGA 2 cut(s) 851, 963
Hpy166II GTNNAC 4 cut(s) 56, 298, 501, 1303
Hpy188I TCNGA 4 cut(s) 590, 803, 877, 1031
Hpy188III TCNNGA 7 cut(s) 172, 633, 683, 1151, 1316, 1348, 1474
Hpy8I GTNNAC 4 cut(s) 56, 298, 501, 1303
HpyCH4III ACNGT 1 cut(s) 1582
HpyCH4IV ACGT 1 cut(s) 1355
HpyF10VI GCNNNNNNNGC 6 cut(s) 185, 394, 577, 716, 725, 1211
HpyF3I CTNAG 3 cut(s) 14, 800, 1091
HpySE526I ACGT 1 cut(s) 1355
Hsp92II CATG 8 cut(s) 121, 175, 323, 382, 529, 547, 1172, 1441
HspAI GCGC 2 cut(s) 177, 693
LguI GCTCTTC 1 cut(s) 378
LmnI GCTCC 3 cut(s) 393, 1211, 1567
Lsp1109I GCAGC 5 cut(s) 175, 990, 1189, 1318, 1474
LweI GCATC 4 cut(s) 614, 706, 1252, 1318
MabI ACCWGGT 1 cut(s) 1305
MaeI CTAG 4 cut(s) 92, 522, 731, 774
MaeII ACGT 1 cut(s) 1355
MaeIII GTNAC 4 cut(s) 435, 969, 1171, 1286
MboII GAAGA 7 cut(s) 383, 395, 421, 585, 1238, 1441, 1556
MflI RGATCY 5 cut(s) 590, 661, 776, 1052, 1364
MhlI GDGCHC 5 cut(s) 58, 214, 390, 730, 1305
MlyI GAGTC 1 cut(s) 572
MmeI TCCRAC 1 cut(s) 1318
MroXI GAANNNNTTC 3 cut(s) 102, 678, 1131
MseI TTAA 9 cut(s) 198, 414, 536, 638, 689, 825, 833, 894, 986
MslI CAYNNNNRTG 1 cut(s) 35
MspA1I CMGCKG 1 cut(s) 8
MspI CCGG 1 cut(s) 1506
MspR9I CCNGG 2 cut(s) 1047, 1307
MvaI CCWGG 2 cut(s) 1047, 1307
MwoI GCNNNNNNNGC 6 cut(s) 185, 394, 577, 716, 725, 1211
NcoI CCATGG 1 cut(s) 543
NdeI CATATG 1 cut(s) 1040
NlaIII CATG 8 cut(s) 121, 175, 323, 382, 529, 547, 1172, 1441
NlaIV GGNNCC 3 cut(s) 663, 1054, 1533
NmuCI GTSAC 3 cut(s) 435, 969, 1171
NspI RCATGY 1 cut(s) 1441
PagI TCATGA 1 cut(s) 171
PaqCI CACCTGC 1 cut(s) 421
PceI AGGCCT 1 cut(s) 757
PciSI GCTCTTC 1 cut(s) 378
PcsI WCGNNNNNNNCGW 1 cut(s) 1141
PdmI GAANNNNTTC 3 cut(s) 102, 678, 1131
PfeI GAWTC 4 cut(s) 204, 702, 1064, 1113
PkrI GCNGC 6 cut(s) 10, 190, 980, 1204, 1333, 1489
PleI GAGTC 1 cut(s) 571
PpsI GAGTC 1 cut(s) 571
PpuMI RGGWCCY 1 cut(s) 1532
Psp124BI GAGCTC 1 cut(s) 390
Psp5II RGGWCCY 1 cut(s) 1532
Psp6I CCWGG 2 cut(s) 1045, 1305
PspEI GGTNACC 1 cut(s) 969
PspFI CCCAGC 2 cut(s) 580, 974
PspGI CCWGG 2 cut(s) 1045, 1305
PspN4I GGNNCC 3 cut(s) 663, 1054, 1533
PspPI GGNCC 1 cut(s) 1532
PspPPI RGGWCCY 1 cut(s) 1532
PsuI RGATCY 5 cut(s) 590, 661, 776, 1052, 1364
PvuII CAGCTG 1 cut(s) 8
RsaI GTAC 1 cut(s) 1422
RsaNI GTAC 1 cut(s) 1421
RseI CAYNNNNRTG 1 cut(s) 35
SacI GAGCTC 1 cut(s) 390
SapI GCTCTTC 1 cut(s) 378
SaqAI TTAA 9 cut(s) 198, 414, 536, 638, 689, 825, 833, 894, 986
SatI GCNGC 6 cut(s) 9, 189, 979, 1203, 1332, 1488
Sau96I GGNCC 1 cut(s) 1532
SchI GAGTC 1 cut(s) 572
ScrFI CCNGG 2 cut(s) 1047, 1307
SduI GDGCHC 5 cut(s) 58, 214, 390, 730, 1305
SexAI ACCWGGT 1 cut(s) 1305
SfaNI GCATC 4 cut(s) 614, 706, 1252, 1318
SfcI CTRYAG 1 cut(s) 1185
SinI GGWCC 1 cut(s) 1532
SmiMI CAYNNNNRTG 1 cut(s) 35
SmlI CTYRAG 1 cut(s) 1316
SmoI CTYRAG 1 cut(s) 1316
SseBI AGGCCT 1 cut(s) 757
SsiI CCGC 2 cut(s) 101, 1441
SspI AATATT 1 cut(s) 349
SspMI CTAG 4 cut(s) 92, 522, 731, 774
SstI GAGCTC 1 cut(s) 390
StuI AGGCCT 1 cut(s) 757
StyD4I CCNGG 2 cut(s) 1045, 1305
StyI CCWWGG 2 cut(s) 543, 1552
TaaI ACNGT 1 cut(s) 1582
TaiI ACGT 1 cut(s) 1358
TaqI TCGA 3 cut(s) 330, 682, 1140
TfiI GAWTC 4 cut(s) 204, 702, 1064, 1113
Tru1I TTAA 9 cut(s) 198, 414, 536, 638, 689, 825, 833, 894, 986
Tru9I TTAA 9 cut(s) 198, 414, 536, 638, 689, 825, 833, 894, 986
TscAI CASTG 5 cut(s) 145, 214, 1113, 1180, 1392
TseFI GTSAC 3 cut(s) 435, 969, 1171
TseI GCWGC 6 cut(s) 8, 188, 978, 1202, 1331, 1487
Tsp45I GTSAC 3 cut(s) 435, 969, 1171
TspDTI ATGAA 9 cut(s) 271, 384, 416, 542, 608, 836, 861, 1239, 1443
TspRI CASTG 5 cut(s) 145, 214, 1113, 1180, 1392
VneI GTGCAC 2 cut(s) 54, 1301
VpaK11BI GGWCC 1 cut(s) 1532
XapI RAATTY 6 cut(s) 529, 538, 763, 843, 1005, 1547
XceI RCATGY 1 cut(s) 1441
XcmI CCANNNNNNNNNTGG 1 cut(s) 790
XmiI GTMKAC 1 cut(s) 500
XmnI GAANNNNTTC 3 cut(s) 102, 678, 1131
XspI CTAG 4 cut(s) 92, 522, 731, 774
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.