Rh5AG414400

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5A
OG0000294
Physical Location & Seq
Forward (+)
71576557 .. 71581111
4555 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5AG414400.1

Sequence Viewer

Length: 1809 bp
ATGAATGTGGAAGATCAAGTTCATATTGGTGTGATTCTAGACATGGGATCACTGGAAGGAAAGATTGTTCTCAGCTGTATTTCAATGGCCCTATCTGATTTTTACCATCTGCATAATAACTACAGCACAAGAGTAATTCTCCACAATAAGGATTCCAAAGGCAAACCTCTACCTGCTATGTCAGCTGCTCTTAGTCTGTTGGATAACATCAAAGTGGAAGCAATAATTGGTGCACGAACTAAAACAGAGGCAAACCTTTTGGCAGAACTAGGAGAAGCGGTTCAACTCCCCGTCATGTCTTTTTCTCCTTCCTTCACTGACAATAAATATGCCTTCTTTGTTGAGATCATGCGCGCTGATCAAGCTGCTGAAGTTAAGGGAATCAGTGCCCTTGTTGATGTTTTCAAATGGAGGGATATTATCCTTCTATATGATAACAAAGAATATGAGAGAGACTTCATTCCATCATTAGTCAACTCCTTCCAAGAGATCACACATGGGAGTATCGACTGCAAAAGTTCAAATATTGCTTCCTCATCATCAAATGAAGAAATCATGGAAGAGCTCCAAAAGCTGATGAAACTGAAGATTAAGGTATTTGTGGTGCAGGTGTCACATTTGCTTGCACCTCGCCTTTTCTTATGTGCAAATAAGTTGGGGATGATGATTGAAGGGTATACTTGGATTGTGACATCAACTAGCATGAATTTCTTAAATTCCATGGATTTGTCTGTTATTGAGTCAATACAAGGAGTGCTGGGTTTCAGATCTTCTATTCCAGCATCATTGAGCCTTCATAGTCTTACTTCAAGATTGAGGAGAAAGTTTCAACTGGAGGATCCCAATATGGAAGCAATTCGAGAGTTAAGCGCAGAAGGAATCTGGGCGTATGATGCAACTTGGGCTCTAGCAGAAGCAGTTGAAAGAGCAAGGCCTAAAAATTCTACCACTAGATCCTCCAAAGGAGTTGTGGTTCTCAGAGAGATAATGCAAAGTAGATTTAATGGTTTAAGTGGTGAAATTCATTATCTAAATGGGAAATTGATTTCATCAGAACCATTTGAGATAGTTAATGTTATAGGAGAAGGGGAGATCAAAAGGATTGGATTTTGGCCTTGCAAAGAGGAACAAAAAACCAGAAAAGGGTCACCCAGCAGCACCTTAATTACTAATGATTGGAAAATTTTAGTTTCAACTATTGATATAGGAAAAATCATATGGCCTGGAGGATCCAAGAGGGAATCATCAATACTTAAAATTAGAAAACTAAGAATTGGTGTTCCAGTGAGAATCGGGTTCAAGGAACTTGTTCGTATCGAGCATGATCTTGAAATCAATAAAACTCATGTCACTGGCTTCTCAATAGATGTATTCAAAGCTGCAATAGGAGCTTTGTCTTATGAAGAGGATGTGGATTACGAGTTTATTCCATTTGAGGATGCCAATGGAAACCCTGCTGGTAGTTACAATGATCTTGTGCACCAGGTTTATCTTGAGAAATACGATGCTGCTGTTGGAGATATCACGATCACATCAAACAGATCTCAATATGTTGATTTTACACTGCCATATACCGATTTTGGTTTGGGATTGTTGGTACGAAATGAAAAGAACATGTGGATTTTCTTCAAACCACTTTCCCCATATCTCTGGATTACAAGTGCTGCTTTCTTTGTCCTAACCGGCTGTGTTGTTTGGATAATTGAGGGTCCTACTAACGAAGAATTCCAAGGCACAGCAGAGGAGCAAATTGGAACAGTAATGTGGTTCTCCTTCTCAACTCTTGTGTTTGCTCTTGGTAAGCACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

602

Amino Acids

67.52

Weight (kDa)

5.62

Isoelectric Point (pI)

39.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 7 - 341 2.4e-10 Periplasmic binding protein
ANF_receptor PF01094 25 - 360 1.6e-52 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 443 - 536 9.1e-11 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 448 - 539 4.7e-07 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 550 - 598 1.9e-06 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 598
Acc36I ACCTGC 2 cut(s) 181, 598
AccI GTMKAC 1 cut(s) 677
AccII CGCG 1 cut(s) 354
AciI CCGC 1 cut(s) 278
AclWI GGATC 6 cut(s) 55, 833, 846, 948, 1224, 1237
AcsI RAATTY 6 cut(s) 706, 715, 940, 1020, 1182, 1724
AcuI CTGAAG 2 cut(s) 390, 605
AfaI GTAC 1 cut(s) 1599
AfiI CCNNNNNNNGG 2 cut(s) 148, 1143
AflIII ACRYGT 1 cut(s) 1614
AjnI CCWGG 2 cut(s) 1222, 1482
AjuI GAANNNNNNNTTGG 2 cut(s) 210, 242
AloI GAACNNNNNNTCC 6 cut(s) 51, 83, 264, 296, 957, 989
AluBI AGCT 7 cut(s) 75, 185, 365, 565, 574, 1379, 1391
AluI AGCT 7 cut(s) 75, 185, 365, 565, 574, 1379, 1391
Alw21I GWGCWC 3 cut(s) 235, 567, 1482
Alw26I GTCTC 1 cut(s) 447
Alw44I GTGCAC 2 cut(s) 231, 1478
AlwI GGATC 6 cut(s) 55, 833, 846, 948, 1224, 1237
AoxI GGCC 4 cut(s) 87, 932, 1112, 1220
ApaLI GTGCAC 2 cut(s) 231, 1478
ApeKI GCWGC 6 cut(s) 185, 365, 1155, 1379, 1508, 1664
ApoI RAATTY 6 cut(s) 706, 715, 940, 1020, 1182, 1724
Asp700I GAANNNNTTC 3 cut(s) 279, 855, 1308
AspLEI GCGC 3 cut(s) 354, 356, 872
AspS9I GGNCC 2 cut(s) 88, 1709
AsuHPI GGTGA 2 cut(s) 1028, 1140
AvaII GGWCC 1 cut(s) 1709
BaeGI GKGCMC 3 cut(s) 235, 391, 1482
BamHI GGATCC 2 cut(s) 838, 1229
BanII GRGCYC 2 cut(s) 567, 907
Bbv12I GWGCWC 3 cut(s) 235, 567, 1482
BbvI GCAGC 6 cut(s) 172, 352, 1167, 1366, 1495, 1651
BccI CCATC 2 cut(s) 114, 472
BciT130I CCWGG 2 cut(s) 1224, 1484
BclI TGATCA 1 cut(s) 358
BcoDI GTCTC 1 cut(s) 447
BfaI CTAG 5 cut(s) 38, 269, 699, 908, 951
BfmI CTRYAG 1 cut(s) 121
BfuAI ACCTGC 2 cut(s) 181, 598
BglII AGATCT 2 cut(s) 767, 1541
BisI GCNGC 6 cut(s) 186, 366, 1156, 1380, 1509, 1665
BlsI GCNGC 6 cut(s) 187, 367, 1157, 1381, 1510, 1666
Bme1390I CCNGG 2 cut(s) 1224, 1484
Bme18I GGWCC 1 cut(s) 1709
BmgT120I GGNCC 2 cut(s) 88, 1709
BmiI GGNNCC 3 cut(s) 840, 1231, 1710
BmrFI CCNGG 2 cut(s) 1224, 1484
BmsI GCATC 4 cut(s) 791, 883, 1429, 1495
BplI GAGNNNNNCTC 2 cut(s) 123, 155
BpmI CTGGAG 2 cut(s) 854, 1245
BpuEI CTTGAG 1 cut(s) 1514
BsaJI CCNNGG 2 cut(s) 720, 1729
BsaXI ACNNNNNCTCC 4 cut(s) 264, 294, 957, 987
Bsc4I CCNNNNNNNGG 2 cut(s) 148, 1143
Bse118I RCCGGY 1 cut(s) 1682
Bse1I ACTGG 4 cut(s) 57, 837, 1283, 1357
BseBI CCWGG 2 cut(s) 1224, 1484
BseDI CCNNGG 2 cut(s) 720, 1729
BseGI GGATG 3 cut(s) 666, 1414, 1444
BseLI CCNNNNNNNGG 2 cut(s) 148, 1143
BseMII CTCAG 2 cut(s) 85, 991
BseNI ACTGG 4 cut(s) 57, 837, 1283, 1357
BsePI GCGCGC 1 cut(s) 352
BseRI GAGGAG 2 cut(s) 832, 1757
BseSI GKGCMC 3 cut(s) 235, 391, 1482
BseXI GCAGC 6 cut(s) 172, 352, 1167, 1366, 1495, 1651
BseYI CCCAGC 2 cut(s) 757, 1151
BsgI GTGCAG 1 cut(s) 626
Bsh1236I CGCG 1 cut(s) 354
BshFI GGCC 4 cut(s) 89, 934, 1114, 1222
BsiHKAI GWGCWC 3 cut(s) 235, 567, 1482
BsiSI CCGG 1 cut(s) 1683
BslI CCNNNNNNNGG 2 cut(s) 148, 1143
BsmAI GTCTC 1 cut(s) 447
BsnI GGCC 4 cut(s) 89, 934, 1114, 1222
Bsp1286I GDGCHC 5 cut(s) 235, 391, 567, 907, 1482
Bsp19I CCATGG 1 cut(s) 720
BspACI CCGC 1 cut(s) 278
BspANI GGCC 4 cut(s) 89, 934, 1114, 1222
BspCNI CTCAG 2 cut(s) 84, 990
BspFNI CGCG 1 cut(s) 354
BspLI GGNNCC 3 cut(s) 840, 1231, 1710
BspMI ACCTGC 2 cut(s) 181, 598
BspPI GGATC 6 cut(s) 55, 833, 846, 948, 1224, 1237
BspQI GCTCTTC 1 cut(s) 555
BsrFI RCCGGY 1 cut(s) 1682
BsrI ACTGG 4 cut(s) 57, 837, 1283, 1357
BssAI RCCGGY 1 cut(s) 1682
BssECI CCNNGG 2 cut(s) 720, 1729
BssHII GCGCGC 1 cut(s) 352
BssNAI GTATAC 1 cut(s) 678
BssT1I CCWWGG 2 cut(s) 720, 1729
Bst1107I GTATAC 1 cut(s) 678
Bst2UI CCWGG 2 cut(s) 1224, 1484
Bst4CI ACNGT 1 cut(s) 1759
Bst6I CTCTTC 2 cut(s) 555, 1398
BstC8I GCNNGC 2 cut(s) 354, 624
BstDEI CTNAG 4 cut(s) 71, 191, 977, 1268
BstDSI CCRYGG 1 cut(s) 720
BstEII GGTNACC 1 cut(s) 1146
BstF5I GGATG 3 cut(s) 666, 1414, 1444
BstFNI CGCG 1 cut(s) 354
BstHHI GCGC 3 cut(s) 354, 356, 872
BstMAI GTCTC 1 cut(s) 447
BstMWI GCNNNNNNNGC 6 cut(s) 182, 362, 571, 893, 902, 1388
BstNI CCWGG 2 cut(s) 1224, 1484
BstNSI RCATGY 1 cut(s) 1618
BstPI GGTNACC 1 cut(s) 1146
BstSCI CCNGG 2 cut(s) 1222, 1482
BstSFI CTRYAG 1 cut(s) 121
BstSLI GKGCMC 3 cut(s) 235, 391, 1482
BstUI CGCG 1 cut(s) 354
BstV1I GCAGC 6 cut(s) 172, 352, 1167, 1366, 1495, 1651
BstX2I RGATCY 5 cut(s) 767, 838, 953, 1229, 1541
BstXI CCANNNNNNTGG 1 cut(s) 1650
BstYI RGATCY 5 cut(s) 767, 838, 953, 1229, 1541
BstZ17I GTATAC 1 cut(s) 678
BsuRI GGCC 4 cut(s) 89, 934, 1114, 1222
BtgI CCRYGG 1 cut(s) 720
BtsCI GGATG 3 cut(s) 666, 1414, 1444
BtsI GCAGTG 1 cut(s) 1562
BtsIMutI CAGTG 6 cut(s) 50, 315, 391, 1290, 1350, 1562
BveI ACCTGC 2 cut(s) 181, 598
Cac8I GCNNGC 2 cut(s) 354, 624
CfoI GCGC 3 cut(s) 354, 356, 872
Cfr10I RCCGGY 1 cut(s) 1682
Cfr13I GGNCC 2 cut(s) 88, 1709
CsiI ACCWGGT 1 cut(s) 1482
Csp6I GTAC 1 cut(s) 1598
CviQI GTAC 1 cut(s) 1598
DdeI CTNAG 4 cut(s) 71, 191, 977, 1268
Eam1104I CTCTTC 2 cut(s) 555, 1398
EarI CTCTTC 2 cut(s) 555, 1398
Ecl136II GAGCTC 1 cut(s) 565
Eco130I CCWWGG 2 cut(s) 720, 1729
Eco147I AGGCCT 1 cut(s) 934
Eco24I GRGCYC 2 cut(s) 567, 907
Eco32I GATATC 1 cut(s) 1522
Eco47I GGWCC 1 cut(s) 1709
Eco53kI GAGCTC 1 cut(s) 565
Eco57I CTGAAG 2 cut(s) 390, 605
Eco91I GGTNACC 1 cut(s) 1146
EcoICRI GAGCTC 1 cut(s) 565
EcoO109I RGGNCCY 1 cut(s) 1709
EcoO65I GGTNACC 1 cut(s) 1146
EcoRI GAATTC 1 cut(s) 1724
EcoRII CCWGG 2 cut(s) 1222, 1482
EcoRV GATATC 1 cut(s) 1522
EcoT14I CCWWGG 2 cut(s) 720, 1729
EcoT38I GRGCYC 2 cut(s) 567, 907
ErhI CCWWGG 2 cut(s) 720, 1729
FalI AAGNNNNNCTT 2 cut(s) 1651, 1683
FauNDI CATATG 1 cut(s) 1217
FbaI TGATCA 1 cut(s) 358
FblI GTMKAC 1 cut(s) 677
Fnu4HI GCNGC 6 cut(s) 186, 366, 1156, 1380, 1509, 1665
FokI GGATG 3 cut(s) 673, 1421, 1451
FriOI GRGCYC 2 cut(s) 567, 907
Fsp4HI GCNGC 6 cut(s) 186, 366, 1156, 1380, 1509, 1665
FspBI CTAG 5 cut(s) 38, 269, 699, 908, 951
GlaI GCGC 3 cut(s) 353, 355, 871
GluI GCNGC 6 cut(s) 186, 366, 1156, 1380, 1509, 1665
GsaI CCCAGC 2 cut(s) 761, 1155
GsuI CTGGAG 2 cut(s) 854, 1245
HaeIII GGCC 4 cut(s) 89, 934, 1114, 1222
HapII CCGG 1 cut(s) 1683
HhaI GCGC 3 cut(s) 354, 356, 872
Hin6I GCGC 3 cut(s) 352, 354, 870
HinP1I GCGC 3 cut(s) 352, 354, 870
HincII GTYRAC 1 cut(s) 475
HindII GTYRAC 1 cut(s) 475
HinfI GANTC 7 cut(s) 34, 152, 381, 740, 879, 1241, 1290
HpaII CCGG 1 cut(s) 1683
HphI GGTGA 2 cut(s) 1028, 1140
Hpy166II GTNNAC 4 cut(s) 233, 475, 678, 1480
Hpy188I TCNGA 4 cut(s) 97, 767, 980, 1054
Hpy188III TCNNGA 7 cut(s) 38, 810, 860, 1328, 1493, 1525, 1651
Hpy8I GTNNAC 4 cut(s) 233, 475, 678, 1480
HpyCH4III ACNGT 1 cut(s) 1759
HpyF10VI GCNNNNNNNGC 6 cut(s) 182, 362, 571, 893, 902, 1388
HpyF3I CTNAG 4 cut(s) 71, 191, 977, 1268
HspAI GCGC 3 cut(s) 352, 354, 870
Ksp22I TGATCA 1 cut(s) 358
LguI GCTCTTC 1 cut(s) 555
LmnI GCTCC 3 cut(s) 570, 1388, 1744
Lsp1109I GCAGC 6 cut(s) 172, 352, 1167, 1366, 1495, 1651
LweI GCATC 4 cut(s) 791, 883, 1429, 1495
MabI ACCWGGT 1 cut(s) 1482
MaeI CTAG 5 cut(s) 38, 269, 699, 908, 951
MaeIII GTNAC 5 cut(s) 612, 688, 1146, 1348, 1463
MboII GAAGA 8 cut(s) 23, 560, 572, 598, 762, 1415, 1618, 1733
MflI RGATCY 5 cut(s) 767, 838, 953, 1229, 1541
MhlI GDGCHC 5 cut(s) 235, 391, 567, 907, 1482
MlyI GAGTC 1 cut(s) 749
MmeI TCCRAC 2 cut(s) 180, 1495
MroXI GAANNNNTTC 3 cut(s) 279, 855, 1308
MseI TTAA 9 cut(s) 375, 591, 713, 866, 1002, 1010, 1071, 1163, 1254
MslI CAYNNNNRTG 2 cut(s) 27, 212
MspA1I CMGCKG 2 cut(s) 75, 185
MspI CCGG 1 cut(s) 1683
MspR9I CCNGG 2 cut(s) 1224, 1484
MvaI CCWGG 2 cut(s) 1224, 1484
MvnI CGCG 1 cut(s) 354
MwoI GCNNNNNNNGC 6 cut(s) 182, 362, 571, 893, 902, 1388
NcoI CCATGG 1 cut(s) 720
NdeI CATATG 1 cut(s) 1217
NlaIV GGNNCC 3 cut(s) 840, 1231, 1710
NmuCI GTSAC 4 cut(s) 612, 688, 1146, 1348
NspI RCATGY 1 cut(s) 1618
PaqCI CACCTGC 1 cut(s) 598
PauI GCGCGC 1 cut(s) 352
PceI AGGCCT 1 cut(s) 934
PciI ACATGT 1 cut(s) 1614
PciSI GCTCTTC 1 cut(s) 555
PdmI GAANNNNTTC 3 cut(s) 279, 855, 1308
PfeI GAWTC 6 cut(s) 34, 152, 381, 879, 1241, 1290
PkrI GCNGC 6 cut(s) 187, 367, 1157, 1381, 1510, 1666
PleI GAGTC 1 cut(s) 748
PpsI GAGTC 1 cut(s) 748
PpuMI RGGWCCY 1 cut(s) 1709
PscI ACATGT 1 cut(s) 1614
Psp124BI GAGCTC 1 cut(s) 567
Psp5II RGGWCCY 1 cut(s) 1709
Psp6I CCWGG 2 cut(s) 1222, 1482
PspEI GGTNACC 1 cut(s) 1146
PspFI CCCAGC 2 cut(s) 757, 1151
PspGI CCWGG 2 cut(s) 1222, 1482
PspN4I GGNNCC 3 cut(s) 840, 1231, 1710
PspPI GGNCC 2 cut(s) 88, 1709
PspPPI RGGWCCY 1 cut(s) 1709
PsuI RGATCY 5 cut(s) 767, 838, 953, 1229, 1541
PteI GCGCGC 1 cut(s) 352
PvuII CAGCTG 2 cut(s) 75, 185
RsaI GTAC 1 cut(s) 1599
RsaNI GTAC 1 cut(s) 1598
RseI CAYNNNNRTG 2 cut(s) 27, 212
SacI GAGCTC 1 cut(s) 567
SapI GCTCTTC 1 cut(s) 555
SaqAI TTAA 9 cut(s) 375, 591, 713, 866, 1002, 1010, 1071, 1163, 1254
SatI GCNGC 6 cut(s) 186, 366, 1156, 1380, 1509, 1665
Sau96I GGNCC 2 cut(s) 88, 1709
SchI GAGTC 1 cut(s) 749
ScrFI CCNGG 2 cut(s) 1224, 1484
SduI GDGCHC 5 cut(s) 235, 391, 567, 907, 1482
SexAI ACCWGGT 1 cut(s) 1482
SfaNI GCATC 4 cut(s) 791, 883, 1429, 1495
SfcI CTRYAG 1 cut(s) 121
SinI GGWCC 1 cut(s) 1709
SmiMI CAYNNNNRTG 2 cut(s) 27, 212
SmlI CTYRAG 1 cut(s) 1493
SmoI CTYRAG 1 cut(s) 1493
SseBI AGGCCT 1 cut(s) 934
SsiI CCGC 1 cut(s) 278
SspI AATATT 1 cut(s) 526
SspMI CTAG 5 cut(s) 38, 269, 699, 908, 951
SstI GAGCTC 1 cut(s) 567
StuI AGGCCT 1 cut(s) 934
StyD4I CCNGG 2 cut(s) 1222, 1482
StyI CCWWGG 2 cut(s) 720, 1729
TaaI ACNGT 1 cut(s) 1759
TaqI TCGA 3 cut(s) 507, 859, 1317
TfiI GAWTC 6 cut(s) 34, 152, 381, 879, 1241, 1290
Tru1I TTAA 9 cut(s) 375, 591, 713, 866, 1002, 1010, 1071, 1163, 1254
Tru9I TTAA 9 cut(s) 375, 591, 713, 866, 1002, 1010, 1071, 1163, 1254
TscAI CASTG 6 cut(s) 57, 322, 391, 1290, 1357, 1569
TseFI GTSAC 4 cut(s) 612, 688, 1146, 1348
TseI GCWGC 6 cut(s) 185, 365, 1155, 1379, 1508, 1664
Tsp45I GTSAC 4 cut(s) 612, 688, 1146, 1348
TspRI CASTG 6 cut(s) 57, 322, 391, 1290, 1357, 1569
VneI GTGCAC 2 cut(s) 231, 1478
VpaK11BI GGWCC 1 cut(s) 1709
XapI RAATTY 6 cut(s) 706, 715, 940, 1020, 1182, 1724
XbaI TCTAGA 1 cut(s) 37
XceI RCATGY 1 cut(s) 1618
XcmI CCANNNNNNNNNTGG 1 cut(s) 967
XmiI GTMKAC 1 cut(s) 677
XmnI GAANNNNTTC 3 cut(s) 279, 855, 1308
XspI CTAG 5 cut(s) 38, 269, 699, 908, 951
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.