Rmu_sc0018911.1_g000004

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0018911.1
Physical Location & Seq
Forward (+)
21334 .. 27950
6617 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0018911.1_g000004.1.cds

Sequence Viewer

Length: 3522 bp
atgcattatgataataatccgctaactgtggaagaagttcgtgtcggtgtgattctggatatgcaatcaagggaaggaaagattgtacttggctgcatttcgacggctctgtcggatttttatcatctgcataataattacagcacaagagtagtactccacaatagagactccagtggaaaacatctgcatgctctatcagctgctcttgatcttttgaataacatcaaagtggaagcaataattggtgcacaaacaagaatggaagcaaacctattagcggatttaggagaagatgttgaagtccctatattgtctctatctcaacctagtctagctcctctgaccaacaaaaatcccttctttgttgaggtcacacaggatgaaactttgcaggttacagggatcactgctcttattgaaatgttcatttggagaaatgttatccttctatatgagaggacaaatcatgcaagtgacataattccatctttgatcaattccttccaagagaaaaatgtctatattgcatatataagttccatttctacctcctcaacaactgaacaaatcattgaagagcttcaaaagctaaaggcattagacgatacagtatttgtggtgcatatctcacattttcttgtgcctcggctttttatggatgcaaagaagctaggaatgatgagtgaagggtatgcttggattctgacatcaacaagcttgaatttcttgaattctatggattctgctgtgattgaatcaatgcaaggagtgctggggttgaagtcgcatattccaacttcaaggagcctccataatcttactcctagattgaggagaaaattgtatattgaggagtcccatatggaagtactagaattgagtgctgatgcaatctgggcatatgatgcaacttgggttctagcagaagcagttgagaggtcatggattaaaatttctacaagactaaaccgaaaggatttaaaagatattgaatcctctaagcctggaagtgtgcttcttgaagagttactgcaaagtagggttaaagggttaagtggtgaaattcagtatccaaagcagaagctaattgcagacaaacttgatatagtaaatgtgataggaaagggggagagaagaattggagttttgacttttgaagaagaaaacacaaaagaatcacagccccttaaaaacaaaagaaatttactttccaccagtgatctggaaactgtcatatggcctggaggatcatcaaccattacgaaaggttccaagaagaaattgagtgaaacaaaattaagagttggtgttcccccaaagagagggttcgaggaacttgtgcatgtgaaacatgacttccaaaccaataaaacaaatttcacaggcttctgtatagatgtgtttgaaaccacaataagaggattgccctatacagtacaatatgagtttattccatttgaggatgctaatggacttttggctgggatgtacgacgatcttgtctaccaggtttatctccagaaatacgatgctgctgttggagatataacaatcacatcaaacagatcgttatatgttgattttacagtaccatattctgacttaggcgtgggaacgctagtagcaaatgaaaaggaaaacatgtggattttcttaagacctttttcaacagacctttggatgacaagtgctggtttctttatgctgactggttttgttgtgtgggtaattgagcgtcctacaaacaaagaattccagggctcaccatcacagcaaattgaaacaatattctggttctccttttcaacccttgtctttgctcatagggaaaagttgttgaacaattcagcaaagtttgtggtgatcatatggttttttgtagttcttatattgacttctagttacactgcaactttaacaacaatgatgacagttaaacaaatgcaattgaacgccagagggaactacataggttaccagggtggttcatcattggttaccgcacatgctgtagagaacttgaatttcaaaggggctaaaccatatagttcagttgaagcatatgctgatgctttgtctagaggaagcaagcatggtggtgtttctgctattgttgacgaggtaccatacattaaggtcttccttgcaaagtattctgagggctactctatgattaaaaccgagtctactaccaatggttttggctttgctttccctaaaggctcgaaattggcacatgacatgtcaatccaagttgaaaaattgagagaagaaggaaagcttttagagatggaaaaggcctggtttcattataatgggaatcacatgtttgaggacacagcaagtcctcccaatactcttaatcttagcagctttcgtggtttattccttgttagtggggtttcttcagcttttgctctatttttgttcacaatttctccactcagagagaaatggcaacttgtgaagaaatgcagatatcttattcaggatcaacatcatcactgcaccgctgctttggaatatgatcaaattttagaaggccttcattccatcttgaaggtctatggttcatcagaagaccatcctgggttcaaaacttttctctctctccgtccggcggcgcgtccggtgacgctgtcgtcggacgggaattgttggccctttgggctgttggtatgtggtttgcaccttcgatctgatcgctggtgtgcaaaggagatggaggggaagatcaaggctgccggcgtgtggtcttgttctcactggccggggttgggtgcggagagggctggaacggcgcttggactgccatggatgcagggtcggcggcttgatggggtagcacgggctaggaggctgactagaggtgatgaggtcgtggcggcggggcttggcttggataggattatcccgacctgggttgggctgtcggtgtacgatctggggaaggtgacggtggaatggggtggtgtctctctatggcgtgccggggagggcggaaggatgatgacggtggtcccgagtcggtggcggagaggcattatgggtggtccggcggtggtcgtagtgggatcaggccgctgttggctggcggctcttgaccttcttgactccatggttggggagttcagatgcaggtggtggtgtgcaggcggtggtgtttgcaggtggtggtgggtgtggcggcctgctgagagtttttggtacaatcttcccttcaccggtcaagaggtcgttcctgttctagagttcggtcaacagcggtggcgaatatgtctggctatagacaaccatccttggccgtctagtgggtccttcctgtctgtgatcgaatcgaaggcgatggcgatttggagtagtggtggatggatggtgttgacaagaaggaggactctggtgggagagtttagtgtcgacacaagtaagttgtctagtttagagttcttactggctcgacgagaggtgagctgtcaaggagtcactgctcctgcgtttttgtctgtcccacagttgtag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

1173

Amino Acids

131.52

Weight (kDa)

7.16

Isoelectric Point (pI)

42.01

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2316
AarI CACCTGC 2 cut(s) 3132, 3162
AasI GACNNNNNNGTC 3 cut(s) 109, 1502, 2644
Acc36I ACCTGC 3 cut(s) 385, 3132, 3162
Acc65I GGTACC 1 cut(s) 2125
AccB1I GGYRCC 1 cut(s) 2125
AccI GTMKAC 3 cut(s) 1506, 2189, 3420
AccII CGCG 1 cut(s) 2629
AclWI GGATC 4 cut(s) 413, 1258, 2502, 3085
AcoI YGGCCR 2 cut(s) 2771, 3305
AcsI RAATTY 9 cut(s) 724, 733, 954, 1065, 1204, 1378, 1754, 2026, 2535
AcuI CTGAAG 1 cut(s) 2394
AfaI GTAC 9 cut(s) 87, 156, 873, 1440, 1493, 1593, 2127, 2942, 3212
AflII CTTAAG 1 cut(s) 1657
AflIII ACRYGT 3 cut(s) 1644, 2244, 2328
AgeI ACCGGT 1 cut(s) 3227
AjnI CCWGG 8 cut(s) 1006, 1243, 1509, 1758, 1980, 2303, 2590, 2921
AjuI GAANNNNNNNTTGG 2 cut(s) 228, 260
Alw21I GWGCWC 1 cut(s) 253
Alw26I GTCTC 3 cut(s) 162, 321, 2983
Alw44I GTGCAC 1 cut(s) 249
AlwI GGATC 4 cut(s) 413, 1258, 2502, 3085
Ama87I CYCGRG 1 cut(s) 3025
AoxI GGCC 8 cut(s) 1241, 2301, 2545, 2663, 2771, 3082, 3191, 3305
ApaLI GTGCAC 1 cut(s) 249
ApeKI GCWGC 6 cut(s) 93, 203, 1535, 2373, 2516, 2744
ApoI RAATTY 9 cut(s) 724, 733, 954, 1065, 1204, 1378, 1754, 2026, 2535
AsiGI ACCGGT 1 cut(s) 3227
Asp700I GAANNNNTTC 3 cut(s) 36, 582, 2547
Asp718I GGTACC 1 cut(s) 2125
AspLEI GCGC 2 cut(s) 2629, 2806
AspS9I GGNCC 4 cut(s) 2664, 3022, 3056, 3318
AsuC2I CCSGG 2 cut(s) 2775, 2995
AsuHPI GGTGA 8 cut(s) 1073, 1758, 1876, 2647, 2885, 2968, 3217, 3481
AvaI CYCGRG 1 cut(s) 3025
AvaII GGWCC 3 cut(s) 3022, 3056, 3318
BaeGI GKGCMC 1 cut(s) 253
BanI GGYRCC 1 cut(s) 2125
BanII GRGCYC 1 cut(s) 1766
BbsI GAAGAC 2 cut(s) 2134, 2589
Bbv12I GWGCWC 1 cut(s) 253
BbvI GCAGC 6 cut(s) 80, 190, 1522, 2385, 2503, 2731
BceAI ACGGC 3 cut(s) 120, 2817, 3292
BciT130I CCWGG 8 cut(s) 1008, 1245, 1511, 1760, 1982, 2305, 2592, 2923
BciVI GTATCC 1 cut(s) 1083
BclI TGATCA 3 cut(s) 495, 1866, 2530
BcnI CCSGG 2 cut(s) 2775, 2995
BcoDI GTCTC 3 cut(s) 162, 321, 2983
BfmI CTRYAG 2 cut(s) 2013, 3288
BfoI RGCGCY 1 cut(s) 2807
BfrI CTTAAG 1 cut(s) 1657
BfuAI ACCTGC 3 cut(s) 385, 3132, 3162
BfuI GTATCC 1 cut(s) 1083
BglI GCCNNNNNGGC 1 cut(s) 2671
BmcAI AGTACT 2 cut(s) 156, 873
Bme18I GGWCC 3 cut(s) 3022, 3056, 3318
BmeT110I CYCGRG 1 cut(s) 3025
BmgT120I GGNCC 4 cut(s) 2664, 3022, 3056, 3318
BmiI GGNNCC 5 cut(s) 809, 1273, 2127, 3024, 3319
BmsI GCATC 8 cut(s) 652, 880, 898, 1456, 1522, 2062, 2811, 3128
BoxI GACNNNNGTC 1 cut(s) 3020
BpiI GAAGAC 2 cut(s) 2134, 2589
BplI GAGNNNNNCTC 4 cut(s) 141, 173, 2153, 2185
BpmI CTGGAG 3 cut(s) 157, 1266, 1505
BpuMI CCSGG 2 cut(s) 2775, 2995
BsaBI GATNNNNATC 3 cut(s) 15, 120, 2499
BsaWI WCCGGW 2 cut(s) 2632, 3227
BsaXI ACNNNNNCTCC 6 cut(s) 282, 312, 2425, 2455, 3352, 3382
Bse118I RCCGGY 2 cut(s) 2747, 3227
Bse1I ACTGG 5 cut(s) 174, 1218, 1717, 2774, 3459
Bse8I GATNNNNATC 3 cut(s) 15, 120, 2499
BseBI CCWGG 8 cut(s) 1008, 1245, 1511, 1760, 1982, 2305, 2592, 2923
BseJI GATNNNNATC 3 cut(s) 15, 120, 2499
BseMII CTCAG 3 cut(s) 2151, 2461, 3189
BseNI ACTGG 5 cut(s) 174, 1218, 1717, 2774, 3459
BseRI GAGGAG 4 cut(s) 330, 544, 850, 869
BseSI GKGCMC 1 cut(s) 253
BseXI GCAGC 6 cut(s) 80, 190, 1522, 2385, 2503, 2731
BseYI CCCAGC 2 cut(s) 775, 1484
BsgI GTGCAG 2 cut(s) 2494, 3174
Bsh1236I CGCG 1 cut(s) 2629
BshFI GGCC 8 cut(s) 1243, 2303, 2547, 2665, 2773, 3084, 3193, 3307
BshNI GGYRCC 1 cut(s) 2125
BshTI ACCGGT 1 cut(s) 3227
BsiHKAI GWGCWC 1 cut(s) 253
BsiHKCI CYCGRG 1 cut(s) 3025
BsiSI CCGG 7 cut(s) 2621, 2633, 2748, 2774, 2994, 3059, 3228
BslFI GGGAC 4 cut(s) 290, 844, 3008, 3494
BsmAI GTCTC 3 cut(s) 162, 321, 2983
BsmFI GGGAC 4 cut(s) 290, 844, 3008, 3494
BsnI GGCC 8 cut(s) 1243, 2303, 2547, 2665, 2773, 3084, 3193, 3307
BsoBI CYCGRG 1 cut(s) 3025
Bsp1286I GDGCHC 2 cut(s) 253, 1766
Bsp19I CCATGG 2 cut(s) 2816, 3120
BspANI GGCC 8 cut(s) 1243, 2303, 2547, 2665, 2773, 3084, 3193, 3307
BspCNI CTCAG 3 cut(s) 2152, 2460, 3190
BspFNI CGCG 1 cut(s) 2629
BspLI GGNNCC 5 cut(s) 809, 1273, 2127, 3024, 3319
BspMI ACCTGC 3 cut(s) 385, 3132, 3162
BspPI GGATC 4 cut(s) 413, 1258, 2502, 3085
BspQI GCTCTTC 1 cut(s) 573
BspT107I GGYRCC 1 cut(s) 2125
BspTI CTTAAG 1 cut(s) 1657
BsrFI RCCGGY 2 cut(s) 2747, 3227
BsrI ACTGG 5 cut(s) 174, 1218, 1717, 2774, 3459
BssAI RCCGGY 2 cut(s) 2747, 3227
BssT1I CCWWGG 3 cut(s) 2816, 3120, 3302
Bst2UI CCWGG 8 cut(s) 1008, 1245, 1511, 1760, 1982, 2305, 2592, 2923
Bst4CI ACNGT 9 cut(s) 28, 613, 1234, 1438, 1591, 1936, 2962, 3019, 3516
Bst6I CTCTTC 2 cut(s) 573, 1020
BstAFI CTTAAG 1 cut(s) 1657
BstAPI GCANNNNNTGC 2 cut(s) 772, 908
BstC8I GCNNGC 7 cut(s) 192, 2093, 2749, 2991, 3096, 3157, 3195
BstDEI CTNAG 6 cut(s) 1002, 1606, 2160, 2369, 2447, 3198
BstDSI CCRYGG 2 cut(s) 2816, 3120
BstEII GGTNACC 2 cut(s) 1976, 1999
BstFNI CGCG 1 cut(s) 2629
BstH2I RGCGCY 1 cut(s) 2807
BstHHI GCGC 2 cut(s) 2629, 2806
BstMAI GTCTC 3 cut(s) 162, 321, 2983
BstNI CCWGG 8 cut(s) 1008, 1245, 1511, 1760, 1982, 2305, 2592, 2923
BstNSI RCATGY 6 cut(s) 194, 1349, 1648, 2012, 2248, 2332
BstPAI GACNNNNGTC 1 cut(s) 3020
BstPI GGTNACC 2 cut(s) 1976, 1999
BstSFI CTRYAG 2 cut(s) 2013, 3288
BstSLI GKGCMC 1 cut(s) 253
BstUI CGCG 1 cut(s) 2629
BstV1I GCAGC 6 cut(s) 80, 190, 1522, 2385, 2503, 2731
BstV2I GAAGAC 2 cut(s) 2134, 2589
BstXI CCANNNNNNTGG 1 cut(s) 1225
BsuI GTATCC 1 cut(s) 1083
BsuRI GGCC 8 cut(s) 1243, 2303, 2547, 2665, 2773, 3084, 3193, 3307
BtgI CCRYGG 2 cut(s) 2816, 3120
BtgZI GCGATG 1 cut(s) 3362
BtsI GCAGTG 4 cut(s) 408, 1908, 2506, 3486
BtsIMutI CAGTG 7 cut(s) 181, 408, 1225, 1908, 2506, 2767, 3486
BveI ACCTGC 3 cut(s) 385, 3132, 3162
Cac8I GCNNGC 7 cut(s) 192, 2093, 2749, 2991, 3096, 3157, 3195
CfoI GCGC 2 cut(s) 2629, 2806
Cfr10I RCCGGY 2 cut(s) 2747, 3227
Cfr13I GGNCC 4 cut(s) 2664, 3022, 3056, 3318
CseI GACGC 3 cut(s) 1727, 2618, 2647
CsiI ACCWGGT 1 cut(s) 1509
Csp6I GTAC 9 cut(s) 86, 155, 872, 1439, 1492, 1592, 2126, 2941, 3211
CspAI ACCGGT 1 cut(s) 3227
CspCI CAANNNNNGTGG 6 cut(s) 1842, 1877, 2080, 2115, 3251, 3286
CviQI GTAC 9 cut(s) 86, 155, 872, 1439, 1492, 1592, 2126, 2941, 3211
DdeI CTNAG 6 cut(s) 1002, 1606, 2160, 2369, 2447, 3198
DraI TTTAAA 1 cut(s) 984
DrdI GACNNNNNNGTC 3 cut(s) 109, 1502, 2644
DseDI GACNNNNNNGTC 3 cut(s) 109, 1502, 2644
EaeI YGGCCR 2 cut(s) 2771, 3305
Eam1104I CTCTTC 2 cut(s) 573, 1020
EarI CTCTTC 2 cut(s) 573, 1020
EciI GGCGGA 2 cut(s) 3018, 3052
Eco130I CCWWGG 3 cut(s) 2816, 3120, 3302
Eco147I AGGCCT 2 cut(s) 2303, 2547
Eco24I GRGCYC 1 cut(s) 1766
Eco32I GATATC 1 cut(s) 2483
Eco47I GGWCC 3 cut(s) 3022, 3056, 3318
Eco57I CTGAAG 1 cut(s) 2394
Eco88I CYCGRG 1 cut(s) 3025
Eco91I GGTNACC 2 cut(s) 1976, 1999
EcoO109I RGGNCCY 1 cut(s) 3318
EcoO65I GGTNACC 2 cut(s) 1976, 1999
EcoRI GAATTC 2 cut(s) 733, 1754
EcoRII CCWGG 8 cut(s) 1006, 1243, 1509, 1758, 1980, 2303, 2590, 2921
EcoRV GATATC 1 cut(s) 2483
EcoT14I CCWWGG 3 cut(s) 2816, 3120, 3302
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 1766
ErhI CCWWGG 3 cut(s) 2816, 3120, 3302
FalI AAGNNNNNCTT 2 cut(s) 2268, 2300
FaqI GGGAC 4 cut(s) 290, 844, 3008, 3494
FauI CCCGC 1 cut(s) 2884
FauNDI CATATG 5 cut(s) 864, 904, 1238, 1871, 2065
FbaI TGATCA 3 cut(s) 495, 1866, 2530
FblI GTMKAC 3 cut(s) 1506, 2189, 3420
FriOI GRGCYC 1 cut(s) 1766
GlaI GCGC 2 cut(s) 2628, 2805
GsaI CCCAGC 2 cut(s) 779, 1488
GsuI CTGGAG 3 cut(s) 157, 1266, 1505
HaeII RGCGCY 1 cut(s) 2807
HaeIII GGCC 8 cut(s) 1243, 2303, 2547, 2665, 2773, 3084, 3193, 3307
HapII CCGG 7 cut(s) 2621, 2633, 2748, 2774, 2994, 3059, 3228
HgaI GACGC 3 cut(s) 1727, 2618, 2647
HhaI GCGC 2 cut(s) 2629, 2806
Hin6I GCGC 2 cut(s) 2627, 2804
HinP1I GCGC 2 cut(s) 2627, 2804
HincII GTYRAC 4 cut(s) 2119, 3263, 3384, 3421
HindII GTYRAC 4 cut(s) 2119, 3263, 3384, 3421
HindIII AAGCTT 2 cut(s) 718, 2282
HpaII CCGG 7 cut(s) 2621, 2633, 2748, 2774, 2994, 3059, 3228
HphI GGTGA 8 cut(s) 1073, 1758, 1876, 2647, 2885, 2968, 3217, 3481
Hpy166II GTNNAC 9 cut(s) 251, 1507, 2119, 2190, 2433, 2941, 3263, 3384, 3421
Hpy8I GTNNAC 9 cut(s) 251, 1507, 2119, 2190, 2433, 2941, 3263, 3384, 3421
Hpy99I CGWCG 4 cut(s) 106, 1499, 2650, 3465
HpyCH4III ACNGT 9 cut(s) 28, 613, 1234, 1438, 1591, 1936, 2962, 3019, 3516
HpyF3I CTNAG 6 cut(s) 1002, 1606, 2160, 2369, 2447, 3198
HspAI GCGC 2 cut(s) 2627, 2804
KpnI GGTACC 1 cut(s) 2129
KroI GCCGGC 1 cut(s) 2747
KroNI GCCGGC 1 cut(s) 2749
Ksp22I TGATCA 3 cut(s) 495, 1866, 2530
LguI GCTCTTC 1 cut(s) 573
LmnI GCTCC 3 cut(s) 343, 807, 3496
Lsp1109I GCAGC 6 cut(s) 80, 190, 1522, 2385, 2503, 2731
LweI GCATC 8 cut(s) 652, 880, 898, 1456, 1522, 2062, 2811, 3128
MabI ACCWGGT 1 cut(s) 1509
MfeI CAATTG 1 cut(s) 1949
MhlI GDGCHC 2 cut(s) 253, 1766
MlyI GAGTC 7 cut(s) 164, 866, 2195, 3037, 3110, 3391, 3492
MmeI TCCRAC 4 cut(s) 93, 821, 1522, 2628
Mph1103I ATGCAT 1 cut(s) 6
MroNI GCCGGC 1 cut(s) 2747
MroXI GAANNNNTTC 3 cut(s) 36, 582, 2547
MslI CAYNNNNRTG 5 cut(s) 189, 230, 474, 2100, 2316
MspA1I CMGCKG 4 cut(s) 203, 2516, 3087, 3268
MspCI CTTAAG 1 cut(s) 1657
MspI CCGG 7 cut(s) 2621, 2633, 2748, 2774, 2994, 3059, 3228
MunI CAATTG 1 cut(s) 1949
MvaI CCWGG 8 cut(s) 1008, 1245, 1511, 1760, 1982, 2305, 2592, 2923
MvnI CGCG 1 cut(s) 2629
NaeI GCCGGC 1 cut(s) 2749
NciI CCSGG 2 cut(s) 2775, 2995
NcoI CCATGG 2 cut(s) 2816, 3120
NdeI CATATG 5 cut(s) 864, 904, 1238, 1871, 2065
NgoMIV GCCGGC 1 cut(s) 2747
NlaIV GGNNCC 5 cut(s) 809, 1273, 2127, 3024, 3319
NmeAIII GCCGAG 1 cut(s) 628
NmuCI GTSAC 5 cut(s) 373, 476, 2635, 2956, 3484
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 6 cut(s) 194, 1349, 1648, 2012, 2248, 2332
PaeI GCATGC 1 cut(s) 194
PaqCI CACCTGC 2 cut(s) 3132, 3162
PceI AGGCCT 2 cut(s) 2303, 2547
PciI ACATGT 3 cut(s) 1644, 2244, 2328
PciSI GCTCTTC 1 cut(s) 573
PcsI WCGNNNNNNNCGW 1 cut(s) 3023
PdiI GCCGGC 1 cut(s) 2749
PdmI GAANNNNTTC 3 cut(s) 36, 582, 2547
PfeI GAWTC 8 cut(s) 52, 703, 743, 758, 995, 1178, 2323, 3338
PflFI GACNNNGTC 1 cut(s) 2641
PinAI ACCGGT 1 cut(s) 3227
PleI GAGTC 7 cut(s) 164, 865, 2194, 3036, 3110, 3391, 3491
PpsI GAGTC 7 cut(s) 164, 865, 2194, 3036, 3110, 3391, 3491
PpuMI RGGWCCY 1 cut(s) 3318
PscI ACATGT 3 cut(s) 1644, 2244, 2328
PshAI GACNNNNGTC 1 cut(s) 3020
PsiI TTATAA 1 cut(s) 2316
Psp5II RGGWCCY 1 cut(s) 3318
Psp6I CCWGG 8 cut(s) 1006, 1243, 1509, 1758, 1980, 2303, 2590, 2921
PspEI GGTNACC 2 cut(s) 1976, 1999
PspFI CCCAGC 2 cut(s) 775, 1484
PspGI CCWGG 8 cut(s) 1006, 1243, 1509, 1758, 1980, 2303, 2590, 2921
PspN4I GGNNCC 5 cut(s) 809, 1273, 2127, 3024, 3319
PspPI GGNCC 4 cut(s) 2664, 3022, 3056, 3318
PspPPI RGGWCCY 1 cut(s) 3318
PsyI GACNNNGTC 1 cut(s) 2641
PvuII CAGCTG 1 cut(s) 203
RsaI GTAC 9 cut(s) 87, 156, 873, 1440, 1493, 1593, 2127, 2942, 3212
RsaNI GTAC 9 cut(s) 86, 155, 872, 1439, 1492, 1592, 2126, 2941, 3211
RseI CAYNNNNRTG 5 cut(s) 189, 230, 474, 2100, 2316
SalI GTCGAC 1 cut(s) 3419
SapI GCTCTTC 1 cut(s) 573
Sau96I GGNCC 4 cut(s) 2664, 3022, 3056, 3318
ScaI AGTACT 2 cut(s) 156, 873
SchI GAGTC 7 cut(s) 164, 866, 2195, 3037, 3110, 3391, 3492
SduI GDGCHC 2 cut(s) 253, 1766
SexAI ACCWGGT 1 cut(s) 1509
SfaNI GCATC 8 cut(s) 652, 880, 898, 1456, 1522, 2062, 2811, 3128
SfcI CTRYAG 2 cut(s) 2013, 3288
SinI GGWCC 3 cut(s) 3022, 3056, 3318
SmiMI CAYNNNNRTG 5 cut(s) 189, 230, 474, 2100, 2316
SmlI CTYRAG 1 cut(s) 1657
SmoI CTYRAG 1 cut(s) 1657
SphI GCATGC 1 cut(s) 194
SseBI AGGCCT 2 cut(s) 2303, 2547
SspI AATATT 1 cut(s) 1791
StuI AGGCCT 2 cut(s) 2303, 2547
StyI CCWWGG 3 cut(s) 2816, 3120, 3302
TaaI ACNGT 9 cut(s) 28, 613, 1234, 1438, 1591, 1936, 2962, 3019, 3516
TaqI TCGA 8 cut(s) 101, 1332, 2228, 2698, 3336, 3341, 3420, 3460
TaqII GACCGA 1 cut(s) 3248
TatI WGTACW 4 cut(s) 85, 154, 871, 1438
TauI GCSGC 6 cut(s) 2627, 2836, 2891, 3087, 3101, 3193
TfiI GAWTC 8 cut(s) 52, 703, 743, 758, 995, 1178, 2323, 3338
TscAI CASTG 7 cut(s) 181, 415, 1225, 1915, 2513, 2774, 3493
TseFI GTSAC 5 cut(s) 373, 476, 2635, 2956, 3484
TseI GCWGC 6 cut(s) 93, 203, 1535, 2373, 2516, 2744
Tsp45I GTSAC 5 cut(s) 373, 476, 2635, 2956, 3484
TspDTI ATGAA 7 cut(s) 399, 418, 1647, 1980, 2300, 2540, 2565
TspGWI ACGGA 1 cut(s) 2606
TspRI CASTG 7 cut(s) 181, 415, 1225, 1915, 2513, 2774, 3493
Tth111I GACNNNGTC 1 cut(s) 2641
Vha464I CTTAAG 1 cut(s) 1657
VneI GTGCAC 1 cut(s) 249
VpaK11BI GGWCC 3 cut(s) 3022, 3056, 3318
XapI RAATTY 9 cut(s) 724, 733, 954, 1065, 1204, 1378, 1754, 2026, 2535
XbaI TCTAGA 2 cut(s) 2081, 3250
XceI RCATGY 6 cut(s) 194, 1349, 1648, 2012, 2248, 2332
XcmI CCANNNNNNNNNTGG 1 cut(s) 1222
XmiI GTMKAC 3 cut(s) 1506, 2189, 3420
XmnI GAANNNNTTC 3 cut(s) 36, 582, 2547
ZrmI AGTACT 2 cut(s) 156, 873
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.