RLG00000029136

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Reverse (-)
33575255 .. 33579370
4116 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029136

Sequence Viewer

Length: 2478 bp
ATGGAGTTTCAAGGGTTAAGGCAAACAGTCATCCTGGCCTTTGTGACTTTCTGTTGCCTCATTGGTCACTTGTGTGCTGATATTGAAAAAACAAATAGTGATACTAGTCCTATTGTTGTTGAAGATCAGGTTCATGTCGGTGTCATTCTCGATATGGGATCAAGGGAAGGAAAGATTATTCTCAGCTGCATATCAATGGCCCTCTCTGATTTTTACCATCTGCATGATAACTACAGTACAAGAGTAGTTCTTCACAGTAAGGATTCCAAAGGTGAACCTCTGCCTGCTCTGTCAGCTGCCCTTGGTCTTTTGGAAAACATCAAAGTGGAATCACTAATTGGTGCACAAACAAGAGCGGAAGCAAACCTTTTGGCAGAATTAGGAGAAGCGGCTAAACTCCCTGTAATGTCTCTTTCTCCTCCTCTGACCAACAATAACTATCCTTTCTTTGTTGAGATCATGCGCGGTGATCAAATTGCTGAAGTTAGGGGAATCAGTGCGCTTATTGAAGTATTCAAATGGAGGGATGTTATACTTTTACATGATAATAAAGAATATGAGAAAGACTTCATTCCATCATTAGTCAACTCTTTCCAAGAGATCACACATGGGAGTGTTTCATACAAGAATTCCAATATTGCTTCCTCCTCATCAAATGAAGAAATCATTGAAGAGCTCCAAAAGCTGATGAGATTGAAGATTAAGGTATTTGTGGTGCATGTGTCACATATGCTTGCACCACGCCTTTTCTTAATAGCAAATAAGTTAGGGATGATGAGTGAAGGGTATGCTTGGATTGTGACTTCGAGTAGCATGAATTTATTGCAATCCATGAATCTATCTGTTATCGAGTCAATGCAAGGAGTGCTGGGGTTCAAGTCTTTTATTCCAGCATCAATGAGCCTTCACAGTCTTACTGCAAGACTGAGGACGAAGTTTTACCTGGAGGATCCCAATATGGAAGCAATTCGGGAGTTAAGTGCAGATGGGATCTGGGCATATGATACGACTTGGGCTCTAGCAGAAGCAGTTCAAAGAGCAAGGCTTAAAAATTCTACCACTAGATCCTCCAAAGATGGAGCTCTGCTTCTTAGAGAGATATTGCAGACTAGATTAAAAGGTTTAAGTGGTGAAATTCAATATGTAAATGGGAAATTGATTCCATCAAAACCATTTGAGATAGTTAATGTTATTGGAAAAGGTGAGATAAAAAGGATTGGATTTTGGCCTTGCAAAGAAGAAGTAAAATCCGGAAAATGGTTAACCCATCAGCAGCTTATTCATAGTAGGAGAAATTTAGCTTCTACAATTGATCTTGAAAGAATCATCTGGCCGGGAGGATCCAAGAGGGACTTGAGCAGTAGTGAAACACTTAAACTAAAAATTGGTGTTCCAGTGAGATATGGGTTCAAGGAACTTGTTCGTGTCGAGCATGATCTTGAAACCAATGCAACTCATGTCACTGGCTTCTCAATAGATGTATTCAAAGCTGCAGTAGGAGCTTTGCCGTATGAAGTGCAGTACGAGTTTATTCCATTTGAGGATGCCAATGGAAATCCTGCGGGGACTTATAATGATCTTGTTTACCAGGTTTATCTCAAGGGGATAAATTATTTTTTGGCCATTACAAATGATCTCTTTAATTGCTCACTAATTTATTTTGCAATATTTAGTATATCTGTAGGTGTATTATATATGCTGACACTGAGATCGGAGAAGTTATCAAATAATTTGACAAAGTTTGTAGTGATCATATGGGTGTTTGTAGTGCTTATATTGACGTCGACTTACACTGCAACTTTAGCATCAATGATGACTGTGAAACAGATACAGTTAAACTCAAGAGGAAACAATATAGGTTACCAATCGGGTTCCTTAGGGGTTATAGTGAACTTGAATTTCAAAGGGCTTAAGCCATATCGTTCAAGTGAGGAGTATTTTGTTGCTTTATCAAAAGGAAGCAAGCATAATGGTGTTTCTGGGGTTATTGACGAGGTTCCATACATCAACATCTTCCTCGCAAACTATTCTGCTGAGTACTCGATGATTAAAACCAAGTCTATCACCAATGGTTTTGCCTTTGTTTTCCCAAAAGGTTCGAAATTGTTTCATGATTTGTCAAGGCAAATCGAACGTCTGAGACAGGAAGAAAAGCTTATAGAGATGGAGAAGACCTGGTCTCTTAGAAAAACAACTCTCACGTCTGATGAGGATATTAATAAGAAAGATCCCAATACGATTGACCTCTACGACTTCCGCGGTCTATTCCTTATTAGTGGCGCTTCTTTAGCTTTTGCTCTTTTCTTATTCATAGTTGTATCCCATAGATTTAGAAATTTGATTAGAGGACTAGTGCAGCTGATTAGAAGACAACTACAGCGTTTAAGGATGTTCCTCTCCAACATAGTATGCAGTAGAACTGAACAAAACTGCTGCATGTCACTTCCTATGCAATTATACATATATTCTGTCCGTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

826

Amino Acids

92.99

Weight (kDa)

8.73

Isoelectric Point (pI)

36.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 44 - 382 2.2e-08 Periplasmic binding protein
ANF_receptor PF01094 63 - 399 7.8e-55 Receptor family ligand binding region
Lig_chan PF00060 553 - 761 5.1e-14 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1572
AatII GACGTC 1 cut(s) 1784
AccBSI CCGCTC 1 cut(s) 356
AccI GTMKAC 1 cut(s) 1784
AccII CGCG 2 cut(s) 465, 2259
AccIII TCCGGA 1 cut(s) 1250
AciI CCGC 6 cut(s) 356, 389, 465, 1562, 2257, 2259
AclWI GGATC 8 cut(s) 166, 944, 957, 998, 1059, 1335, 1348, 2222
AcoI YGGCCR 2 cut(s) 1331, 1620
AcsI RAATTY 7 cut(s) 628, 817, 1051, 1134, 1294, 1897, 2335
AcuI CTGAAG 1 cut(s) 501
AcyI GRCGYC 1 cut(s) 1781
AfaI GTAC 3 cut(s) 238, 1523, 2039
AfiI CCNNNNNNNGG 1 cut(s) 1257
AflII CTTAAG 1 cut(s) 1910
AhlI ACTAGT 2 cut(s) 104, 2350
AjiI CACGTC 1 cut(s) 2202
AjnI CCWGG 4 cut(s) 33, 942, 1587, 2174
AjuI GAANNNNNNNTTGG 2 cut(s) 321, 353
AleI CACNNNNGTG 1 cut(s) 72
Alw21I GWGCWC 3 cut(s) 346, 678, 1084
Alw26I GTCTC 3 cut(s) 414, 2134, 2184
Alw44I GTGCAC 1 cut(s) 342
AlwI GGATC 8 cut(s) 166, 944, 957, 998, 1059, 1335, 1348, 2222
Aor13HI TCCGGA 1 cut(s) 1250
AoxI GGCC 5 cut(s) 36, 198, 1226, 1331, 1620
ApaLI GTGCAC 1 cut(s) 342
ApeKI GCWGC 6 cut(s) 186, 296, 1273, 1490, 2356, 2433
ApoI RAATTY 7 cut(s) 628, 817, 1051, 1134, 1294, 1897, 2335
ArsI GACNNNNNNTTYG 2 cut(s) 2119, 2151
AseI ATTAAT 1 cut(s) 2217
Asp700I GAANNNNTTC 4 cut(s) 566, 966, 1029, 1419
AspLEI GCGC 3 cut(s) 465, 502, 2282
AspS9I GGNCC 1 cut(s) 199
AsuC2I CCSGG 1 cut(s) 1335
AsuHPI GGTGA 5 cut(s) 284, 479, 1142, 1214, 2056
AsuII TTCGAA 1 cut(s) 2099
AxyI CCTNAGG 1 cut(s) 1876
BaeGI GKGCMC 1 cut(s) 346
BalI TGGCCA 1 cut(s) 1622
BamHI GGATCC 2 cut(s) 949, 1340
BanII GRGCYC 3 cut(s) 678, 1018, 1084
BbsI GAAGAC 2 cut(s) 2177, 2374
Bbv12I GWGCWC 3 cut(s) 346, 678, 1084
BbvI GCAGC 6 cut(s) 173, 283, 1285, 1477, 2368, 2420
BccI CCATC 7 cut(s) 225, 583, 980, 1070, 1171, 1275, 2158
BceAI ACGGC 1 cut(s) 1492
BciT130I CCWGG 4 cut(s) 35, 944, 1589, 2176
BciVI GTATCC 1 cut(s) 2329
BclI TGATCA 2 cut(s) 469, 1749
BcnI CCSGG 1 cut(s) 1335
BcoDI GTCTC 3 cut(s) 414, 2134, 2184
BcuI ACTAGT 2 cut(s) 104, 2350
BfaI CTAG 5 cut(s) 105, 1019, 1062, 1110, 2351
BfmI CTRYAG 4 cut(s) 232, 1491, 1680, 2375
BfoI RGCGCY 1 cut(s) 2283
BfrI CTTAAG 1 cut(s) 1910
BfuI GTATCC 1 cut(s) 2329
BisI GCNGC 7 cut(s) 187, 297, 390, 1274, 1491, 2357, 2434
BlsI GCNGC 7 cut(s) 188, 298, 391, 1275, 1492, 2358, 2435
BmcAI AGTACT 1 cut(s) 2039
Bme1390I CCNGG 5 cut(s) 35, 944, 1335, 1589, 2176
BmgBI CACGTC 1 cut(s) 2202
BmgT120I GGNCC 1 cut(s) 199
BmiI GGNNCC 4 cut(s) 951, 1342, 1873, 1998
BmrFI CCNGG 5 cut(s) 35, 944, 1335, 1589, 2176
BmsI GCATC 3 cut(s) 902, 1534, 1814
BpiI GAAGAC 2 cut(s) 2177, 2374
BpmI CTGGAG 1 cut(s) 965
Bpu14I TTCGAA 1 cut(s) 2099
BpuEI CTTGAG 3 cut(s) 1375, 1583, 1825
BpuMI CCSGG 1 cut(s) 1335
BsaHI GRCGYC 1 cut(s) 1781
BsaI GGTCTC 1 cut(s) 2184
BsaJI CCNNGG 2 cut(s) 301, 2257
BsaWI WCCGGW 1 cut(s) 1250
Bsc4I CCNNNNNNNGG 1 cut(s) 1257
Bse1I ACTGG 2 cut(s) 1394, 1468
Bse21I CCTNAGG 1 cut(s) 1876
BseAI TCCGGA 1 cut(s) 1250
BseBI CCWGG 4 cut(s) 35, 944, 1589, 2176
BseDI CCNNGG 2 cut(s) 301, 2257
BseGI GGATG 5 cut(s) 30, 532, 777, 1549, 2394
BseLI CCNNNNNNNGG 1 cut(s) 1257
BseMII CTCAG 5 cut(s) 196, 917, 1697, 2025, 2129
BseNI ACTGG 2 cut(s) 1394, 1468
BseRI GAGGAG 4 cut(s) 408, 411, 637, 1946
BseSI GKGCMC 1 cut(s) 346
BseXI GCAGC 6 cut(s) 173, 283, 1285, 1477, 2368, 2420
BseYI CCCAGC 1 cut(s) 868
BsgI GTGCAG 3 cut(s) 1002, 1538, 2375
Bsh1236I CGCG 2 cut(s) 465, 2259
BshFI GGCC 5 cut(s) 38, 200, 1228, 1333, 1622
BsiHKAI GWGCWC 3 cut(s) 346, 678, 1084
BsiSI CCGG 2 cut(s) 1251, 1334
BslFI GGGAC 2 cut(s) 1364, 1579
BslI CCNNNNNNNGG 1 cut(s) 1257
BsmAI GTCTC 3 cut(s) 414, 2134, 2184
BsmFI GGGAC 2 cut(s) 1364, 1579
BsnI GGCC 5 cut(s) 38, 200, 1228, 1333, 1622
Bso31I GGTCTC 1 cut(s) 2184
Bsp119I TTCGAA 1 cut(s) 2099
Bsp1286I GDGCHC 4 cut(s) 346, 678, 1018, 1084
Bsp13I TCCGGA 1 cut(s) 1250
BspACI CCGC 6 cut(s) 356, 389, 465, 1562, 2257, 2259
BspANI GGCC 5 cut(s) 38, 200, 1228, 1333, 1622
BspCNI CTCAG 5 cut(s) 195, 918, 1698, 2026, 2130
BspEI TCCGGA 1 cut(s) 1250
BspFNI CGCG 2 cut(s) 465, 2259
BspHI TCATGA 1 cut(s) 2110
BspLI GGNNCC 4 cut(s) 951, 1342, 1873, 1998
BspMAI CTGCAG 1 cut(s) 1495
BspPI GGATC 8 cut(s) 166, 944, 957, 998, 1059, 1335, 1348, 2222
BspQI GCTCTTC 1 cut(s) 666
BspT104I TTCGAA 1 cut(s) 2099
BspTI CTTAAG 1 cut(s) 1910
BspTNI GGTCTC 1 cut(s) 2184
BsrBI CCGCTC 1 cut(s) 356
BsrI ACTGG 2 cut(s) 1394, 1468
BssECI CCNNGG 2 cut(s) 301, 2257
BssNI GRCGYC 1 cut(s) 1781
BssT1I CCWWGG 1 cut(s) 301
Bst2UI CCWGG 4 cut(s) 35, 944, 1589, 2176
Bst4CI ACNGT 6 cut(s) 28, 236, 257, 911, 1819, 1833
Bst6I CTCTTC 1 cut(s) 666
BstACI GRCGYC 1 cut(s) 1781
BstAFI CTTAAG 1 cut(s) 1910
BstAPI GCANNNNNTGC 1 cut(s) 865
BstBI TTCGAA 1 cut(s) 2099
BstC8I GCNNGC 3 cut(s) 285, 735, 1964
BstDEI CTNAG 8 cut(s) 182, 926, 1091, 1706, 1876, 2034, 2138, 2183
BstDSI CCRYGG 1 cut(s) 2257
BstEII GGTNACC 1 cut(s) 1859
BstF5I GGATG 5 cut(s) 30, 532, 777, 1549, 2394
BstFNI CGCG 2 cut(s) 465, 2259
BstH2I RGCGCY 1 cut(s) 2283
BstHHI GCGC 3 cut(s) 465, 502, 2282
BstMAI GTCTC 3 cut(s) 414, 2134, 2184
BstMWI GCNNNNNNNGC 6 cut(s) 293, 682, 865, 1499, 1802, 2288
BstNI CCWGG 4 cut(s) 35, 944, 1589, 2176
BstNSI RCATGY 2 cut(s) 722, 2440
BstPI GGTNACC 1 cut(s) 1859
BstSCI CCNGG 5 cut(s) 33, 942, 1333, 1587, 2174
BstSFI CTRYAG 4 cut(s) 232, 1491, 1680, 2375
BstSLI GKGCMC 1 cut(s) 346
BstUI CGCG 2 cut(s) 465, 2259
BstV1I GCAGC 6 cut(s) 173, 283, 1285, 1477, 2368, 2420
BstV2I GAAGAC 2 cut(s) 2177, 2374
BstX2I RGATCY 5 cut(s) 949, 990, 1064, 1340, 2227
BstYI RGATCY 5 cut(s) 949, 990, 1064, 1340, 2227
Bsu36I CCTNAGG 1 cut(s) 1876
BsuI GTATCC 1 cut(s) 2329
BsuRI GGCC 5 cut(s) 38, 200, 1228, 1333, 1622
BtgI CCRYGG 1 cut(s) 2257
BtrI CACGTC 1 cut(s) 2202
BtsCI GGATG 5 cut(s) 30, 532, 777, 1549, 2394
BtsI GCAGTG 1 cut(s) 1791
BtsIMutI CAGTG 5 cut(s) 502, 1401, 1461, 1703, 1791
Cac8I GCNNGC 3 cut(s) 285, 735, 1964
CciI TCATGA 1 cut(s) 2110
CfoI GCGC 3 cut(s) 465, 502, 2282
Cfr13I GGNCC 1 cut(s) 199
Cfr42I CCGCGG 1 cut(s) 2260
CsiI ACCWGGT 2 cut(s) 1587, 2174
Csp6I GTAC 3 cut(s) 237, 1522, 2038
CviQI GTAC 3 cut(s) 237, 1522, 2038
DdeI CTNAG 8 cut(s) 182, 926, 1091, 1706, 1876, 2034, 2138, 2183
EaeI YGGCCR 2 cut(s) 1331, 1620
Eam1104I CTCTTC 1 cut(s) 666
EarI CTCTTC 1 cut(s) 666
Ecl136II GAGCTC 2 cut(s) 676, 1082
Eco130I CCWWGG 1 cut(s) 301
Eco24I GRGCYC 3 cut(s) 678, 1018, 1084
Eco31I GGTCTC 1 cut(s) 2184
Eco53kI GAGCTC 2 cut(s) 676, 1082
Eco57I CTGAAG 1 cut(s) 501
Eco81I CCTNAGG 1 cut(s) 1876
Eco91I GGTNACC 1 cut(s) 1859
EcoICRI GAGCTC 2 cut(s) 676, 1082
EcoO65I GGTNACC 1 cut(s) 1859
EcoRI GAATTC 1 cut(s) 628
EcoRII CCWGG 4 cut(s) 33, 942, 1587, 2174
EcoT14I CCWWGG 1 cut(s) 301
EcoT38I GRGCYC 3 cut(s) 678, 1018, 1084
ErhI CCWWGG 1 cut(s) 301
FalI AAGNNNNNCTT 6 cut(s) 351, 383, 1337, 1369, 2139, 2171
FaqI GGGAC 2 cut(s) 1364, 1579
FauI CCCGC 1 cut(s) 1555
FauNDI CATATG 3 cut(s) 729, 1000, 1754
FbaI TGATCA 2 cut(s) 469, 1749
FblI GTMKAC 1 cut(s) 1784
Fnu4HI GCNGC 7 cut(s) 187, 297, 390, 1274, 1491, 2357, 2434
FokI GGATG 5 cut(s) 17, 539, 784, 1556, 2401
FriOI GRGCYC 3 cut(s) 678, 1018, 1084
Fsp4HI GCNGC 7 cut(s) 187, 297, 390, 1274, 1491, 2357, 2434
FspBI CTAG 5 cut(s) 105, 1019, 1062, 1110, 2351
GlaI GCGC 3 cut(s) 464, 501, 2281
GluI GCNGC 7 cut(s) 187, 297, 390, 1274, 1491, 2357, 2434
GsaI CCCAGC 1 cut(s) 872
GsuI CTGGAG 1 cut(s) 965
HaeII RGCGCY 1 cut(s) 2283
HaeIII GGCC 5 cut(s) 38, 200, 1228, 1333, 1622
HapII CCGG 2 cut(s) 1251, 1334
HhaI GCGC 3 cut(s) 465, 502, 2282
Hin1I GRCGYC 1 cut(s) 1781
Hin6I GCGC 3 cut(s) 463, 500, 2280
HinP1I GCGC 3 cut(s) 463, 500, 2280
HincII GTYRAC 3 cut(s) 586, 1263, 1785
HindII GTYRAC 3 cut(s) 586, 1263, 1785
HindIII AAGCTT 1 cut(s) 2153
HinfI GANTC 7 cut(s) 263, 329, 492, 835, 851, 1159, 1323
HpaI GTTAAC 1 cut(s) 1263
HpaII CCGG 2 cut(s) 1251, 1334
HphI GGTGA 5 cut(s) 284, 479, 1142, 1214, 2056
Hpy166II GTNNAC 7 cut(s) 275, 344, 586, 1263, 1585, 1785, 1891
Hpy188I TCNGA 5 cut(s) 208, 426, 1714, 2139, 2206
Hpy188III TCNNGA 7 cut(s) 149, 971, 1251, 1316, 1439, 1842, 2111
Hpy8I GTNNAC 7 cut(s) 275, 344, 586, 1263, 1585, 1785, 1891
Hpy99I CGWCG 1 cut(s) 1786
HpyAV CCTTC 3 cut(s) 161, 776, 914
HpyCH4III ACNGT 6 cut(s) 28, 236, 257, 911, 1819, 1833
HpyCH4IV ACGT 3 cut(s) 1781, 2134, 2201
HpyF10VI GCNNNNNNNGC 6 cut(s) 293, 682, 865, 1499, 1802, 2288
HpyF3I CTNAG 8 cut(s) 182, 926, 1091, 1706, 1876, 2034, 2138, 2183
HpySE526I ACGT 3 cut(s) 1781, 2134, 2201
Hsp92I GRCGYC 1 cut(s) 1781
HspAI GCGC 3 cut(s) 463, 500, 2280
Kpn2I TCCGGA 1 cut(s) 1250
Ksp22I TGATCA 2 cut(s) 469, 1749
KspAI GTTAAC 1 cut(s) 1263
KspI CCGCGG 1 cut(s) 2260
LguI GCTCTTC 1 cut(s) 666
LmnI GCTCC 3 cut(s) 681, 1079, 1499
Lsp1109I GCAGC 6 cut(s) 173, 283, 1285, 1477, 2368, 2420
LweI GCATC 3 cut(s) 902, 1534, 1814
MabI ACCWGGT 2 cut(s) 1587, 2174
MaeI CTAG 5 cut(s) 105, 1019, 1062, 1110, 2351
MaeII ACGT 3 cut(s) 1781, 2134, 2201
MaeIII GTNAC 7 cut(s) 43, 65, 723, 799, 1459, 1859, 2439
MbiI CCGCTC 1 cut(s) 356
MfeI CAATTG 1 cut(s) 1308
MflI RGATCY 5 cut(s) 949, 990, 1064, 1340, 2227
MhlI GDGCHC 4 cut(s) 346, 678, 1018, 1084
MlsI TGGCCA 1 cut(s) 1622
MluNI TGGCCA 1 cut(s) 1622
MlyI GAGTC 1 cut(s) 860
MmeI TCCRAC 1 cut(s) 2424
Mox20I TGGCCA 1 cut(s) 1622
MroI TCCGGA 1 cut(s) 1250
MroXI GAANNNNTTC 4 cut(s) 566, 966, 1029, 1419
MscI TGGCCA 1 cut(s) 1622
MslI CAYNNNNRTG 8 cut(s) 72, 138, 194, 222, 323, 612, 1757, 1971
Msp20I TGGCCA 1 cut(s) 1622
MspA1I CMGCKG 4 cut(s) 186, 296, 2259, 2359
MspCI CTTAAG 1 cut(s) 1910
MspI CCGG 2 cut(s) 1251, 1334
MspR9I CCNGG 5 cut(s) 35, 944, 1335, 1589, 2176
MunI CAATTG 1 cut(s) 1308
MvaI CCWGG 4 cut(s) 35, 944, 1589, 2176
MvnI CGCG 2 cut(s) 465, 2259
MwoI GCNNNNNNNGC 6 cut(s) 293, 682, 865, 1499, 1802, 2288
NciI CCSGG 1 cut(s) 1335
NdeI CATATG 3 cut(s) 729, 1000, 1754
NlaIV GGNNCC 4 cut(s) 951, 1342, 1873, 1998
NmuCI GTSAC 6 cut(s) 43, 65, 723, 799, 1459, 2439
NspI RCATGY 2 cut(s) 722, 2440
NspV TTCGAA 1 cut(s) 2099
OliI CACNNNNGTG 1 cut(s) 72
PagI TCATGA 1 cut(s) 2110
PciSI GCTCTTC 1 cut(s) 666
PdmI GAANNNNTTC 4 cut(s) 566, 966, 1029, 1419
PfeI GAWTC 6 cut(s) 263, 329, 492, 835, 1159, 1323
PflFI GACNNNGTC 1 cut(s) 2176
PkrI GCNGC 7 cut(s) 188, 298, 391, 1275, 1492, 2358, 2435
PleI GAGTC 1 cut(s) 859
PpsI GAGTC 1 cut(s) 859
PshBI ATTAAT 1 cut(s) 2217
PsiI TTATAA 1 cut(s) 1572
Psp124BI GAGCTC 2 cut(s) 678, 1084
Psp6I CCWGG 4 cut(s) 33, 942, 1587, 2174
PspEI GGTNACC 1 cut(s) 1859
PspFI CCCAGC 1 cut(s) 868
PspGI CCWGG 4 cut(s) 33, 942, 1587, 2174
PspN4I GGNNCC 4 cut(s) 951, 1342, 1873, 1998
PspPI GGNCC 1 cut(s) 199
PstI CTGCAG 1 cut(s) 1495
PsuI RGATCY 5 cut(s) 949, 990, 1064, 1340, 2227
PsyI GACNNNGTC 1 cut(s) 2176
PvuII CAGCTG 3 cut(s) 186, 296, 2359
RsaI GTAC 3 cut(s) 238, 1523, 2039
RsaNI GTAC 3 cut(s) 237, 1522, 2038
RseI CAYNNNNRTG 8 cut(s) 72, 138, 194, 222, 323, 612, 1757, 1971
SacI GAGCTC 2 cut(s) 678, 1084
SacII CCGCGG 1 cut(s) 2260
SalI GTCGAC 1 cut(s) 1783
SapI GCTCTTC 1 cut(s) 666
SatI GCNGC 7 cut(s) 187, 297, 390, 1274, 1491, 2357, 2434
Sau96I GGNCC 1 cut(s) 199
ScaI AGTACT 1 cut(s) 2039
SchI GAGTC 1 cut(s) 860
ScrFI CCNGG 5 cut(s) 35, 944, 1335, 1589, 2176
SduI GDGCHC 4 cut(s) 346, 678, 1018, 1084
SexAI ACCWGGT 2 cut(s) 1587, 2174
SfaNI GCATC 3 cut(s) 902, 1534, 1814
SfcI CTRYAG 4 cut(s) 232, 1491, 1680, 2375
Sfr303I CCGCGG 1 cut(s) 2260
SfuI TTCGAA 1 cut(s) 2099
SgrBI CCGCGG 1 cut(s) 2260
SmiMI CAYNNNNRTG 8 cut(s) 72, 138, 194, 222, 323, 612, 1757, 1971
SmlI CTYRAG 4 cut(s) 1354, 1598, 1840, 1910
SmoI CTYRAG 4 cut(s) 1354, 1598, 1840, 1910
SpeI ACTAGT 2 cut(s) 104, 2350
SsiI CCGC 6 cut(s) 356, 389, 465, 1562, 2257, 2259
SspI AATATT 2 cut(s) 637, 1668
SspMI CTAG 5 cut(s) 105, 1019, 1062, 1110, 2351
SstI GAGCTC 2 cut(s) 678, 1084
StyD4I CCNGG 5 cut(s) 33, 942, 1333, 1587, 2174
StyI CCWWGG 1 cut(s) 301
TaaI ACNGT 6 cut(s) 28, 236, 257, 911, 1819, 1833
TaiI ACGT 3 cut(s) 1784, 2137, 2204
TaqI TCGA 8 cut(s) 150, 806, 849, 1428, 1784, 2042, 2099, 2130
TatI WGTACW 2 cut(s) 236, 2037
TauI GCSGC 1 cut(s) 392
TfiI GAWTC 6 cut(s) 263, 329, 492, 835, 1159, 1323
TscAI CASTG 5 cut(s) 502, 1401, 1468, 1710, 1798
TseFI GTSAC 6 cut(s) 43, 65, 723, 799, 1459, 2439
TseI GCWGC 6 cut(s) 186, 296, 1273, 1490, 2356, 2433
Tsp45I GTSAC 6 cut(s) 43, 65, 723, 799, 1459, 2439
TspGWI ACGGA 1 cut(s) 2462
TspRI CASTG 5 cut(s) 502, 1401, 1468, 1710, 1798
Tth111I GACNNNGTC 1 cut(s) 2176
Vha464I CTTAAG 1 cut(s) 1910
VneI GTGCAC 1 cut(s) 342
VspI ATTAAT 1 cut(s) 2217
XapI RAATTY 7 cut(s) 628, 817, 1051, 1134, 1294, 1897, 2335
XceI RCATGY 2 cut(s) 722, 2440
XmiI GTMKAC 1 cut(s) 1784
XmnI GAANNNNTTC 4 cut(s) 566, 966, 1029, 1419
XspI CTAG 5 cut(s) 105, 1019, 1062, 1110, 2351
ZraI GACGTC 1 cut(s) 1782
ZrmI AGTACT 1 cut(s) 2039
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.