Rh1BG137800

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1B
OG0000294
Physical Location & Seq
Forward (+)
22984012 .. 22999537
15526 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1BG137800.1

Sequence Viewer

Length: 2655 bp
ATGGCTCAAATGTATGGAATTTCACTCCTCTGCATATTATTTTGCTTCCTGGGTCTCCTGTGTGCTGAAGTTGATGAAAAAGTGCATTACAGCAGTCCTAGTGTTGCGGACGAGGTTGACGTTGGTGTGATTCTTGATATGGGATCAAGGGAAGCAAAACTTGTTCTCAGTTGCATTTCAATGGCCCTGTCTGATTTCTACAACCTGCACAACAACTACAGCACAAGAGTAGTTCTCCACAGTAGGGATTCCCATGGAAAAGCTCTACATGCTCTATCAGCTGCTGTTAGTCTTTTGGATAACATCAAAGTGGAATCAATAATTAGTGCAGAACCAAGAATGGAAGCAGACTTATTGGAAGAATTAGGAGGAGTTGAAGTCCCAGTATTGTCTCTGTCTCAACCAATTGCTTCTCCTCCTCTGACTCATAGATATCCCTTCTTCATTGAGATGAGACAGGATGAAACTTCTCAGGTTATGGGAATTGTTTCCCTTATTAAAACGTACAAATGGAAGGATGTTATCCTTCTATATGAGAGCACAAAATATGCATACAACATCATTCCATCTTTGATTAGTTCTTTCCAGGAGAAAAATATCTATGTTTCATATAAGAGTTCCATATCTGCCTCCTCAACAAATCAACAAATCATTGAGGAGCTCCATAAGCTCATGACATTGAAGACTAGGATAATTGTGGTGCATATGTCCCATGTGCTCATGCCTCGCCTATTCTTAAATGCAAAAAAGTTAGGAATGATGAGAGAAGGGTATGCCTGGATTATGACATCAACTAGTATGAATTTCTTGCAATCTATGAACTTATCTGTCATTGAGTCTATGCAGGGAGTGCTGGGTTTCAAGTCTTATATTCCGGCTTCAACCAACCTCCACAGACTTACTTCCAGAATCAGGAGAAAATTTTATATTGAGGAGCCTGATATGGAACTAGGTAGGGAGTTGAGTGCAGATGGAATCTGGGCATATGATGCAACTTGGGCTCTATCAGAAGCAGTTGAGAGGACAAGAATCAAAAGTTCTACTACTGGATCCTCCAAGCATGGAGCTGAGCTTCTTAGAGAGATTCTACAAACTAGATTTGAAGGTTTAAGTGGTGAAGTTCGATATCCAAATGGGAACTTGATTTCAAATGGATTCGAGATAGTGAACGTAATCGGAACAGGGGTGAGAAGAGTTGGATTTTGGCCTTATGAAGAAGAAAAAATCACGAAAGAGTCACTCCCACTTAGTAACAGGAGGAATGCCATTTCCACAAACCATCTGGAAACAATCATATGGCCTGGAGGATCATCAACCATCTCGAGAAGTTCCAAGAGGCGACTGAGTGGAATTAAACTAAAAGTTGGGGTTCCAGTAAAAATAGGGTTCAAGGAACTTGTGCGTGTGGAGCATGATCAACAAACCAATAGAACTCATGTTACAGGCTTCTGTATAGACGTATTCGAAGCTGCAATTAGAGGACTGCCTTATAAAGTACATTATGAGTTTATTCCATTTGAGAATTCCTCGGTAGTTGGGGGGTATGACGATCTGGTTTACAAGGTTTATCTACAGACATATGATGCTGTTGCTGGAGATATAACGATCACACCGAATAGATCTTTGTATGTTGATTTTACAATACCATTTACTGACATGGGGGTGGGAATGTTAGTACGGAATGAAAAGGAAAACATGTGGGTTTTCTTGGAACCTCTGTCAGCAAATCTTTGGATGACAAGTGGTGGTTTTTTTATCCTAACGGGTTTTGTTGTGTGGATAATTGAGCGTCCTGTCAACCAAGAGTTCCAGGGATCAACATCACAGCAACTTGGAACAATATTCTGGTTCTCCTTCTCAACCCTTGTGTTTTCTCATAGGGAAAAGTTGTTGAACAACTTGGCCAAGTTTGTCACGATCGTCTGGGTTTTTGTAGTGCTTATATTGACATCCAGTTATACTGCAACTTTAGCATCAATGCTGACAGTTAAACAGATCAATTTAAACTCAAGAAGTAACTATATAGCTGACCTTGTAAGTTTTGGAGGGCCGAGGCATAAGTTGTATCGTACAGTTGAACAATTTGCTGATGCTTTATCAAGAGGAAGTAAGCATGGTGGTGTTTCTGCTATCATTGAAGAAATTCCATACCTCAAAATCTTCCTAGCAAAGTATCCTGCTGACTACTCCATGATTAAACCCAAGTTAACTACCAATGGTTTTGGCTTTGTTTTTCCTAAAGGTTCTAAATTGGTCCATGACATGTCGAGGCAAATTGAAATTTTAAGAGAAGAAGGAAAGCTTTTAGAGATGGAAAAGGCCTGGTTTCAGATCTCAGATGACGCGAGTAGTCCTAATCCTGGGCACGAGCACGACGACCTGCCCCGACTCTCCCTCGATTCGGACAAACCAAACCTGAATCCGAACCCGAACCCAATGTTCTCCCTCCACCGCAAGACGGCGCTGGCCAAAACGGCAGTCAAGATTCAGGAAATCGAGCAGAGAGCGGTGGCGGATCAGGCGGCGAGGGTGGGATGGAACTCGAGCAACCCTAGAATGAACTCGTCGAGGAAAATAGTGTTCCAAAGCTTAGAGCGTAGCTCGAGCAGTCCAAGCAGCTTCAATGGTGGGTATTGCGTTTTTCATGATTTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan Lig_chan-Glu_bd SBP_bac_3

Protein Analysis

884

Amino Acids

99.57

Weight (kDa)

8.0

Isoelectric Point (pI)

40.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 39 - 384 2.7e-08 Periplasmic binding protein
ANF_receptor PF01094 56 - 393 2.5e-64 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 471 - 562 2e-08 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 477 - 777 1.1e-11 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 575 - 668 2.7e-27 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1491
Acc36I ACCTGC 2 cut(s) 213, 2388
AccBSI CCGCTC 1 cut(s) 2507
AccII CGCG 1 cut(s) 2345
AciI CCGC 5 cut(s) 107, 2452, 2507, 2513, 2522
AclWI GGATC 6 cut(s) 151, 1044, 1057, 1315, 1822, 2523
AcoI YGGCCR 2 cut(s) 1902, 2466
AcsI RAATTY 6 cut(s) 18, 802, 920, 1522, 2142, 2280
AcuI CTGAAG 1 cut(s) 87
AfaI GTAC 4 cut(s) 506, 1497, 1677, 2071
AfiI CCNNNNNNNGG 5 cut(s) 244, 912, 2360, 2401, 2458
AflIII ACRYGT 2 cut(s) 1695, 2262
AhlI ACTAGT 1 cut(s) 794
AjnI CCWGG 7 cut(s) 48, 585, 776, 1300, 1809, 2321, 2359
Alw21I GWGCWC 4 cut(s) 542, 663, 720, 2373
Alw26I GTCTC 4 cut(s) 59, 396, 402, 448
AlwI GGATC 6 cut(s) 151, 1044, 1057, 1315, 1822, 2523
AlwNI CAGNNNCTG 1 cut(s) 284
Ama87I CYCGRG 3 cut(s) 1321, 2542, 2602
AoxI GGCC 7 cut(s) 183, 1205, 1298, 1902, 2048, 2319, 2466
ApeKI GCWGC 3 cut(s) 281, 1469, 2616
ApoI RAATTY 6 cut(s) 18, 802, 920, 1522, 2142, 2280
ArsI GACNNNNNNTTYG 2 cut(s) 2463, 2495
Asp700I GAANNNNTTC 2 cut(s) 487, 2142
AspLEI GCGC 1 cut(s) 2464
AspS9I GGNCC 3 cut(s) 184, 2048, 2254
AsuHPI GGTGA 2 cut(s) 1127, 1198
AsuII TTCGAA 1 cut(s) 1464
AvaI CYCGRG 3 cut(s) 1321, 2542, 2602
AvaII GGWCC 1 cut(s) 2254
BaeGI GKGCMC 1 cut(s) 2367
BalI TGGCCA 2 cut(s) 1904, 2468
BamHI GGATCC 1 cut(s) 1049
BanII GRGCYC 2 cut(s) 663, 1003
BauI CACGAG 1 cut(s) 2366
BbsI GAAGAC 1 cut(s) 689
Bbv12I GWGCWC 4 cut(s) 542, 663, 720, 2373
BbvI GCAGC 3 cut(s) 268, 1456, 2628
BccI CCATC 6 cut(s) 574, 965, 1287, 1325, 2305, 2529
BceAI ACGGC 2 cut(s) 2475, 2490
BciT130I CCWGG 7 cut(s) 50, 587, 778, 1302, 1811, 2323, 2361
BciVI GTATCC 1 cut(s) 2184
BclI TGATCA 1 cut(s) 1414
BcoDI GTCTC 4 cut(s) 59, 396, 402, 448
BcuI ACTAGT 1 cut(s) 794
BfaI CTAG 8 cut(s) 99, 687, 795, 950, 1095, 2165, 2553, 2653
BfmI CTRYAG 2 cut(s) 217, 1571
BfoI RGCGCY 1 cut(s) 2465
BfuAI ACCTGC 2 cut(s) 213, 2388
BfuI GTATCC 1 cut(s) 2184
BglI GCCNNNNNGGC 1 cut(s) 2474
BglII AGATCT 2 cut(s) 1619, 2331
BisI GCNGC 4 cut(s) 282, 1470, 2523, 2617
BlpI GCTNAGC 1 cut(s) 1068
BlsI GCNGC 4 cut(s) 283, 1471, 2524, 2618
Bme1390I CCNGG 7 cut(s) 50, 587, 778, 1302, 1811, 2323, 2361
Bme18I GGWCC 1 cut(s) 2254
BmeT110I CYCGRG 3 cut(s) 1321, 2542, 2602
BmgT120I GGNCC 3 cut(s) 184, 2048, 2254
BmiI GGNNCC 4 cut(s) 936, 1051, 1371, 1713
BmrFI CCNGG 7 cut(s) 50, 587, 778, 1302, 1811, 2323, 2361
BmrI ACTGGG 1 cut(s) 377
BmsI GCATC 4 cut(s) 979, 1573, 1982, 2080
BmuI ACTGGG 1 cut(s) 377
BpiI GAAGAC 1 cut(s) 689
BplI GAGNNNNNCTC 6 cut(s) 219, 251, 1511, 1543, 2585, 2617
BpmI CTGGAG 2 cut(s) 1323, 1614
Bpu1102I GCTNAGC 1 cut(s) 1068
Bpu14I TTCGAA 1 cut(s) 1464
BpuEI CTTGAG 1 cut(s) 1993
BsaBI GATNNNNATC 1 cut(s) 1819
BsaI GGTCTC 1 cut(s) 59
BsaJI CCNNGG 6 cut(s) 49, 253, 1527, 1810, 2051, 2360
BsaXI ACNNNNNCTCC 2 cut(s) 363, 393
Bsc4I CCNNNNNNNGG 5 cut(s) 244, 912, 2360, 2401, 2458
Bse1I ACTGG 4 cut(s) 383, 1051, 1373, 1953
Bse8I GATNNNNATC 1 cut(s) 1819
BseBI CCWGG 7 cut(s) 50, 587, 778, 1302, 1811, 2323, 2361
BseDI CCNNGG 6 cut(s) 49, 253, 1527, 1810, 2051, 2360
BseGI GGATG 5 cut(s) 466, 523, 1740, 1949, 2540
BseJI GATNNNNATC 1 cut(s) 1819
BseLI CCNNNNNNNGG 5 cut(s) 244, 912, 2360, 2401, 2458
BseMII CTCAG 5 cut(s) 181, 485, 1059, 1334, 2349
BseNI ACTGG 4 cut(s) 383, 1051, 1373, 1953
BseRI GAGGAG 7 cut(s) 17, 384, 405, 408, 622, 671, 947
BseSI GKGCMC 1 cut(s) 2367
BseXI GCAGC 3 cut(s) 268, 1456, 2628
BseYI CCCAGC 1 cut(s) 853
BsgI GTGCAG 3 cut(s) 191, 348, 987
Bsh1236I CGCG 1 cut(s) 2345
Bsh1285I CGRYCG 1 cut(s) 1920
BshFI GGCC 7 cut(s) 185, 1207, 1300, 1904, 2050, 2321, 2468
BsiEI CGRYCG 1 cut(s) 1920
BsiHKAI GWGCWC 4 cut(s) 542, 663, 720, 2373
BsiHKCI CYCGRG 3 cut(s) 1321, 2542, 2602
BsiSI CCGG 1 cut(s) 875
BslFI GGGAC 2 cut(s) 365, 694
BslI CCNNNNNNNGG 5 cut(s) 244, 912, 2360, 2401, 2458
BsmAI GTCTC 4 cut(s) 59, 396, 402, 448
BsmFI GGGAC 2 cut(s) 365, 694
BsmI GAATGC 1 cut(s) 1267
BsnI GGCC 7 cut(s) 185, 1207, 1300, 1904, 2050, 2321, 2468
Bso31I GGTCTC 1 cut(s) 59
BsoBI CYCGRG 3 cut(s) 1321, 2542, 2602
Bsp119I TTCGAA 1 cut(s) 1464
Bsp1286I GDGCHC 6 cut(s) 542, 663, 720, 1003, 2367, 2373
Bsp1720I GCTNAGC 1 cut(s) 1068
Bsp19I CCATGG 1 cut(s) 253
BspACI CCGC 5 cut(s) 107, 2452, 2507, 2513, 2522
BspANI GGCC 7 cut(s) 185, 1207, 1300, 1904, 2050, 2321, 2468
BspCNI CTCAG 5 cut(s) 180, 484, 1060, 1335, 2348
BspFNI CGCG 1 cut(s) 2345
BspHI TCATGA 2 cut(s) 672, 2644
BspLI GGNNCC 4 cut(s) 936, 1051, 1371, 1713
BspMI ACCTGC 2 cut(s) 213, 2388
BspPI GGATC 6 cut(s) 151, 1044, 1057, 1315, 1822, 2523
BspT104I TTCGAA 1 cut(s) 1464
BspTNI GGTCTC 1 cut(s) 59
BsrBI CCGCTC 1 cut(s) 2507
BsrI ACTGG 4 cut(s) 383, 1051, 1373, 1953
BssECI CCNNGG 6 cut(s) 49, 253, 1527, 1810, 2051, 2360
BssSI CACGAG 1 cut(s) 2366
BssT1I CCWWGG 1 cut(s) 253
Bst2BI CACGAG 1 cut(s) 2366
Bst2UI CCWGG 7 cut(s) 50, 587, 778, 1302, 1811, 2323, 2361
Bst4CI ACNGT 3 cut(s) 242, 1987, 2074
Bst6I CTCTTC 1 cut(s) 1186
BstAPI GCANNNNNTGC 2 cut(s) 850, 989
BstBI TTCGAA 1 cut(s) 1464
BstC8I GCNNGC 1 cut(s) 2466
BstDEI CTNAG 8 cut(s) 167, 471, 1068, 1076, 1247, 1343, 2335, 2590
BstDSI CCRYGG 1 cut(s) 253
BstF5I GGATG 5 cut(s) 466, 523, 1740, 1949, 2540
BstFNI CGCG 1 cut(s) 2345
BstH2I RGCGCY 1 cut(s) 2465
BstHHI GCGC 1 cut(s) 2464
BstMAI GTCTC 4 cut(s) 59, 396, 402, 448
BstMCI CGRYCG 1 cut(s) 1920
BstNI CCWGG 7 cut(s) 50, 587, 778, 1302, 1811, 2323, 2361
BstNSI RCATGY 3 cut(s) 272, 1699, 2266
BstSCI CCNGG 7 cut(s) 48, 585, 776, 1300, 1809, 2321, 2359
BstSFI CTRYAG 2 cut(s) 217, 1571
BstSLI GKGCMC 1 cut(s) 2367
BstUI CGCG 1 cut(s) 2345
BstV1I GCAGC 3 cut(s) 268, 1456, 2628
BstV2I GAAGAC 1 cut(s) 689
BstX2I RGATCY 3 cut(s) 1049, 1619, 2331
BstYI RGATCY 3 cut(s) 1049, 1619, 2331
BsuI GTATCC 1 cut(s) 2184
BsuRI GGCC 7 cut(s) 185, 1207, 1300, 1904, 2050, 2321, 2468
BtgI CCRYGG 1 cut(s) 253
BtsCI GGATG 5 cut(s) 466, 523, 1740, 1949, 2540
BveI ACCTGC 2 cut(s) 213, 2388
Cac8I GCNNGC 1 cut(s) 2466
CaiI CAGNNNCTG 1 cut(s) 284
CciI TCATGA 2 cut(s) 672, 2644
CfoI GCGC 1 cut(s) 2464
Cfr13I GGNCC 3 cut(s) 184, 2048, 2254
CseI GACGC 2 cut(s) 1778, 2351
Csp6I GTAC 4 cut(s) 505, 1496, 1676, 2070
CviQI GTAC 4 cut(s) 505, 1496, 1676, 2070
DdeI CTNAG 8 cut(s) 167, 471, 1068, 1076, 1247, 1343, 2335, 2590
DraI TTTAAA 1 cut(s) 2004
EaeI YGGCCR 2 cut(s) 1902, 2466
Eam1104I CTCTTC 1 cut(s) 1186
EarI CTCTTC 1 cut(s) 1186
EciI GGCGGA 1 cut(s) 2528
Ecl136II GAGCTC 1 cut(s) 661
Eco130I CCWWGG 1 cut(s) 253
Eco147I AGGCCT 1 cut(s) 2321
Eco24I GRGCYC 2 cut(s) 663, 1003
Eco31I GGTCTC 1 cut(s) 59
Eco32I GATATC 2 cut(s) 434, 1127
Eco47I GGWCC 1 cut(s) 2254
Eco53kI GAGCTC 1 cut(s) 661
Eco57I CTGAAG 1 cut(s) 87
Eco88I CYCGRG 3 cut(s) 1321, 2542, 2602
EcoICRI GAGCTC 1 cut(s) 661
EcoRI GAATTC 1 cut(s) 1522
EcoRII CCWGG 7 cut(s) 48, 585, 776, 1300, 1809, 2321, 2359
EcoRV GATATC 2 cut(s) 434, 1127
EcoT14I CCWWGG 1 cut(s) 253
EcoT22I ATGCAT 1 cut(s) 553
EcoT38I GRGCYC 2 cut(s) 663, 1003
ErhI CCWWGG 1 cut(s) 253
FalI AAGNNNNNCTT 4 cut(s) 144, 176, 2286, 2318
FaqI GGGAC 2 cut(s) 365, 694
FauNDI CATATG 4 cut(s) 705, 985, 1295, 1579
FbaI TGATCA 1 cut(s) 1414
Fnu4HI GCNGC 4 cut(s) 282, 1470, 2523, 2617
FokI GGATG 5 cut(s) 473, 530, 1747, 1936, 2547
FriOI GRGCYC 2 cut(s) 663, 1003
Fsp4HI GCNGC 4 cut(s) 282, 1470, 2523, 2617
FspBI CTAG 8 cut(s) 99, 687, 795, 950, 1095, 2165, 2553, 2653
GlaI GCGC 1 cut(s) 2463
GluI GCNGC 4 cut(s) 282, 1470, 2523, 2617
GsaI CCCAGC 1 cut(s) 857
GsuI CTGGAG 2 cut(s) 1323, 1614
HaeII RGCGCY 1 cut(s) 2465
HaeIII GGCC 7 cut(s) 185, 1207, 1300, 1904, 2050, 2321, 2468
HapII CCGG 1 cut(s) 875
HgaI GACGC 2 cut(s) 1778, 2351
HhaI GCGC 1 cut(s) 2464
Hin6I GCGC 1 cut(s) 2462
HinP1I GCGC 1 cut(s) 2462
HincII GTYRAC 3 cut(s) 118, 1798, 2208
HindII GTYRAC 3 cut(s) 118, 1798, 2208
HindIII AAGCTT 2 cut(s) 2300, 2587
HpaI GTTAAC 1 cut(s) 2208
HpaII CCGG 1 cut(s) 875
HphI GGTGA 2 cut(s) 1127, 1198
Hpy166II GTNNAC 5 cut(s) 118, 1168, 1558, 1798, 2208
Hpy188I TCNGA 8 cut(s) 193, 423, 1009, 1178, 2331, 2338, 2404, 2424
Hpy8I GTNNAC 5 cut(s) 118, 1168, 1558, 1798, 2208
Hpy99I CGWCG 2 cut(s) 2378, 2569
HpyAV CCTTC 7 cut(s) 448, 508, 536, 761, 1097, 1864, 2288
HpyCH4III ACNGT 3 cut(s) 242, 1987, 2074
HpyCH4IV ACGT 4 cut(s) 120, 503, 1170, 1458
HpyF3I CTNAG 8 cut(s) 167, 471, 1068, 1076, 1247, 1343, 2335, 2590
HpySE526I ACGT 4 cut(s) 120, 503, 1170, 1458
HspAI GCGC 1 cut(s) 2462
Ksp22I TGATCA 1 cut(s) 1414
KspAI GTTAAC 1 cut(s) 2208
LmnI GCTCC 5 cut(s) 658, 666, 934, 1064, 1408
Lsp1109I GCAGC 3 cut(s) 268, 1456, 2628
LweI GCATC 4 cut(s) 979, 1573, 1982, 2080
MaeI CTAG 8 cut(s) 99, 687, 795, 950, 1095, 2165, 2553, 2653
MaeII ACGT 4 cut(s) 120, 503, 1170, 1458
MaeIII GTNAC 5 cut(s) 1236, 1250, 1438, 1912, 2015
MbiI CCGCTC 1 cut(s) 2507
MboII GAAGA 9 cut(s) 371, 433, 694, 1203, 1226, 1229, 2150, 2152, 2303
MfeI CAATTG 1 cut(s) 405
MflI RGATCY 3 cut(s) 1049, 1619, 2331
MhlI GDGCHC 6 cut(s) 542, 663, 720, 1003, 2367, 2373
MlsI TGGCCA 2 cut(s) 1904, 2468
MluNI TGGCCA 2 cut(s) 1904, 2468
MlyI GAGTC 4 cut(s) 418, 845, 1244, 2382
MmeI TCCRAC 1 cut(s) 1177
Mox20I TGGCCA 2 cut(s) 1904, 2468
Mph1103I ATGCAT 1 cut(s) 553
MroXI GAANNNNTTC 2 cut(s) 487, 2142
MscI TGGCCA 2 cut(s) 1904, 2468
MseI TTAA 9 cut(s) 498, 737, 1109, 1353, 1989, 2003, 2196, 2207, 2285
MslI CAYNNNNRTG 5 cut(s) 179, 308, 449, 1661, 2118
Msp20I TGGCCA 2 cut(s) 1904, 2468
MspA1I CMGCKG 1 cut(s) 281
MspI CCGG 1 cut(s) 875
MspR9I CCNGG 7 cut(s) 50, 587, 778, 1302, 1811, 2323, 2361
MunI CAATTG 1 cut(s) 405
Mva1269I GAATGC 1 cut(s) 1267
MvaI CCWGG 7 cut(s) 50, 587, 778, 1302, 1811, 2323, 2361
MvnI CGCG 1 cut(s) 2345
NcoI CCATGG 1 cut(s) 253
NdeI CATATG 4 cut(s) 705, 985, 1295, 1579
NlaIV GGNNCC 4 cut(s) 936, 1051, 1371, 1713
NmeAIII GCCGAG 1 cut(s) 2076
NmuCI GTSAC 2 cut(s) 1236, 1912
NsiI ATGCAT 1 cut(s) 553
NspI RCATGY 3 cut(s) 272, 1699, 2266
NspV TTCGAA 1 cut(s) 1464
PaeR7I CTCGAG 3 cut(s) 1321, 2542, 2602
PagI TCATGA 2 cut(s) 672, 2644
PceI AGGCCT 1 cut(s) 2321
PciI ACATGT 2 cut(s) 1695, 2262
PcsI WCGNNNNNNNCGW 3 cut(s) 117, 1610, 2373
PctI GAATGC 1 cut(s) 1267
PdmI GAANNNNTTC 2 cut(s) 487, 2142
PfoI TCCNGGA 1 cut(s) 585
PkrI GCNGC 4 cut(s) 283, 1471, 2524, 2618
Ple19I CGATCG 1 cut(s) 1920
PleI GAGTC 4 cut(s) 418, 844, 1243, 2382
PpsI GAGTC 4 cut(s) 418, 844, 1243, 2382
PscI ACATGT 2 cut(s) 1695, 2262
PsiI TTATAA 1 cut(s) 1491
Psp124BI GAGCTC 1 cut(s) 663
Psp6I CCWGG 7 cut(s) 48, 585, 776, 1300, 1809, 2321, 2359
PspFI CCCAGC 1 cut(s) 853
PspGI CCWGG 7 cut(s) 48, 585, 776, 1300, 1809, 2321, 2359
PspN4I GGNNCC 4 cut(s) 936, 1051, 1371, 1713
PspPI GGNCC 3 cut(s) 184, 2048, 2254
PspXI VCTCGAGB 2 cut(s) 2542, 2602
PsrI GAACNNNNNNTAC 2 cut(s) 1423, 1455
PstNI CAGNNNCTG 1 cut(s) 284
PsuI RGATCY 3 cut(s) 1049, 1619, 2331
PvuI CGATCG 1 cut(s) 1920
PvuII CAGCTG 1 cut(s) 281
RsaI GTAC 4 cut(s) 506, 1497, 1677, 2071
RsaNI GTAC 4 cut(s) 505, 1496, 1676, 2070
RseI CAYNNNNRTG 5 cut(s) 179, 308, 449, 1661, 2118
SacI GAGCTC 1 cut(s) 663
SaqAI TTAA 9 cut(s) 498, 737, 1109, 1353, 1989, 2003, 2196, 2207, 2285
SatI GCNGC 4 cut(s) 282, 1470, 2523, 2617
Sau96I GGNCC 3 cut(s) 184, 2048, 2254
SchI GAGTC 4 cut(s) 418, 845, 1244, 2382
ScrFI CCNGG 7 cut(s) 50, 587, 778, 1302, 1811, 2323, 2361
SduI GDGCHC 6 cut(s) 542, 663, 720, 1003, 2367, 2373
SfaNI GCATC 4 cut(s) 979, 1573, 1982, 2080
SfcI CTRYAG 2 cut(s) 217, 1571
Sfr274I CTCGAG 3 cut(s) 1321, 2542, 2602
SfuI TTCGAA 1 cut(s) 1464
SinI GGWCC 1 cut(s) 2254
SlaI CTCGAG 3 cut(s) 1321, 2542, 2602
SmiMI CAYNNNNRTG 5 cut(s) 179, 308, 449, 1661, 2118
SmlI CTYRAG 4 cut(s) 1321, 2008, 2542, 2602
SmoI CTYRAG 4 cut(s) 1321, 2008, 2542, 2602
SpeI ACTAGT 1 cut(s) 794
SseBI AGGCCT 1 cut(s) 2321
SsiI CCGC 5 cut(s) 107, 2452, 2507, 2513, 2522
SspI AATATT 1 cut(s) 1842
SspMI CTAG 8 cut(s) 99, 687, 795, 950, 1095, 2165, 2553, 2653
SstI GAGCTC 1 cut(s) 663
StuI AGGCCT 1 cut(s) 2321
StyD4I CCNGG 7 cut(s) 48, 585, 776, 1300, 1809, 2321, 2359
StyI CCWWGG 1 cut(s) 253
TaaI ACNGT 3 cut(s) 242, 1987, 2074
TaiI ACGT 4 cut(s) 123, 506, 1173, 1461
TatI WGTACW 1 cut(s) 1495
TauI GCSGC 1 cut(s) 2525
Tru1I TTAA 9 cut(s) 498, 737, 1109, 1353, 1989, 2003, 2196, 2207, 2285
Tru9I TTAA 9 cut(s) 498, 737, 1109, 1353, 1989, 2003, 2196, 2207, 2285
TseFI GTSAC 2 cut(s) 1236, 1912
TseI GCWGC 3 cut(s) 281, 1469, 2616
Tsp45I GTSAC 2 cut(s) 1236, 1912
TspGWI ACGGA 1 cut(s) 1693
VpaK11BI GGWCC 1 cut(s) 2254
XapI RAATTY 6 cut(s) 18, 802, 920, 1522, 2142, 2280
XceI RCATGY 3 cut(s) 272, 1699, 2266
XcmI CCANNNNNNNNNTGG 1 cut(s) 1279
XhoI CTCGAG 3 cut(s) 1321, 2542, 2602
XmnI GAANNNNTTC 2 cut(s) 487, 2142
XspI CTAG 8 cut(s) 99, 687, 795, 950, 1095, 2165, 2553, 2653
Zsp2I ATGCAT 1 cut(s) 553
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.