RchiOBHm_Chr1g0341911

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000294
Physical Location & Seq
Reverse (-)
33817428 .. 33820811
3384 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56859

Sequence Viewer

Length: 1869 bp
ATGATAACAAAGAATATATATGAGAAAGACTTCATTCCATCATTAGTCAACTCTTTCCAAGAGATCACACATCGGAGTGTTTCATACAAGAGTTCCAATATTGCTTCCTCCTCATCAAATGAAGAAATCATTGAAGAGCTCCAAAAGCTGACGAGATTGAAGATTAAGGTATTTGTGGTGCATGTGTCACATTTGCTTGCACCACGCCTTTTCTTAATTGCAAATAAGTTAGGGATGAGGAGTGAAGGGTATGCTTGGATTGTGACTTCGAGTAGCATGAATTTATTGCAAGCCATGAATTTATCTGTTATCGAGTCAATGCAAGGAGTGCTGGGTTTCAAGTCGTCTATTCCAGCATCAATAAACCTTCACAGTCTTACAACAAGATTGAGGAGGAAGTTTTACATGGAGGATCCAAATATGGAAGCGATTCGGGAGTTGAGTGCAGATGGGATCTGGGCATATGATGCAACTTGGGCTCTAGGAAAAGCAGTTGAAAAAGCAAGGCTTAAAAATTCTACAACTAGATCCTCCAAAGATGGAGTTGTGCTTCTTAATGAGATGTTACAGACTAGATTTAAAGGTTTAAGTGTGAGATTCGGGTTCAAGGAACTTGTTCGTGTCGAGCATGATCTTGAAATCAACACAACTCATGTCACTGGCTTTTCTATAGATGTATTTAAAGCTGCAATTGGAGCTTTGCCGTATGAAGTGCAATACGAGTTTATTCCATTTGAGGATGCCAATGGAAATTCTGCAGGGACTTATAATGATCTTGTTTACCAGGTTTATCTCAAGAAATTCGATGCTGTTGTTGGAGATGTTACTATCACAGAGAACAGATCTCAGTATGTTGATTTTACAATCCCATATACTGACTTAGGTGTGGGAATGTTGGTACCAAATGCCAAGGAAAACATGTGGTTTTTCTTTAAACCACTTTCAAAATATCTTTGGATAACAACTGCTGCTTTCTTTATCCTTACTGGATTTGTTGTCTGGATAATTGAGCATCCTACTAATGAAAACTTCCGAGGCACAGCAGCAGAACAAATTGGAACAGTATTCTGGTTCTCCTTCTTTTCTCTTGGGTTCACTTATACGGAGAAGTTGTCAAATAATTTGGCAAAGTTTGTTGTGATCATATGGGTGTTTTTAGTGCTTATATTGACGTCGACTTACACTGCAACTCTAGCATCAATGATGACAGTCAAACAGATACAGTTAAACTCAAGGGGAAACTATATAGGTTACCAATCGGGTTCCTTAGGAGTTATAGTGAACTTGAATTTCAAAGGGATTAAGCCATATCGTTCAAGTGAGGAGTATTTTGTTGCTTTATCAAAAGGAAGCAAGCATAATGGTGTTTCTGGGGTTATTGACGAGGTTCTATACATCAACATCTTCCTCCCAAACTATTCTGCTGACTACTCGATGATTAAAACCAAGTCTATCACCAATGGTTTTGCCTTTGTTTTCCCTAAAGGTTCGAAATTGGTTCAAGATGTGTCAAGGCAAATTGAACGTCTGAGACAGGAAGAAAAGCTTATAGAGATGGAGAAGACCTGGTTTCTTAGAAAAACAACTCTCATGTCTGATGAGGATATTAATAACAAAGATCCCAATACGATTGACCTCTACGACATCCGCGGTCTATTCGTTATTAGTGGCGCTTCTTTAGCGATTGCTCTTTTCTTATTCATAGTTGTATCCCATAGATTTAGAAATCTGATTAGAGGACTAGTGCAGTTGATTGGAAGACAACTACAGCGTTTAAGGATGTTTGTCTCCAACAAAGTATGCAGTAGAACTGAACAAAACTGCTGCATGTCACTTCCTATGCAATTGTACATATACACTGTCCGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

622

Amino Acids

70.85

Weight (kDa)

9.18

Isoelectric Point (pI)

32.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 7 - 214 4.4e-27 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 211 - 302 9.4e-11 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 217 - 525 2.5e-13 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 317 - 558 3.3e-24 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 768
AatII GACGTC 1 cut(s) 1175
Acc65I GGTACC 1 cut(s) 898
AccB1I GGYRCC 1 cut(s) 898
AccI GTMKAC 1 cut(s) 1175
AccII CGCG 1 cut(s) 1650
AciI CCGC 2 cut(s) 1648, 1650
AclWI GGATC 5 cut(s) 407, 420, 461, 522, 1613
AcsI RAATTY 6 cut(s) 280, 298, 514, 751, 800, 1288
AcyI GRCGYC 1 cut(s) 1172
AfaI GTAC 2 cut(s) 900, 1850
AflIII ACRYGT 1 cut(s) 918
AhlI ACTAGT 1 cut(s) 1741
AjnI CCWGG 2 cut(s) 783, 1565
AluBI AGCT 5 cut(s) 139, 148, 686, 698, 1546
AluI AGCT 5 cut(s) 139, 148, 686, 698, 1546
Alw21I GWGCWC 1 cut(s) 141
Alw26I GTCTC 2 cut(s) 1525, 1792
AlwI GGATC 5 cut(s) 407, 420, 461, 522, 1613
ApeKI GCWGC 4 cut(s) 686, 968, 1043, 1824
ApoI RAATTY 6 cut(s) 280, 298, 514, 751, 800, 1288
ArsI GACNNNNNNTTYG 2 cut(s) 1510, 1542
AseI ATTAAT 1 cut(s) 1608
Asp700I GAANNNNTTC 3 cut(s) 29, 429, 615
Asp718I GGTACC 1 cut(s) 898
AspLEI GCGC 1 cut(s) 1673
AsuHPI GGTGA 1 cut(s) 1447
AsuII TTCGAA 1 cut(s) 1490
AxyI CCTNAGG 1 cut(s) 1267
BamHI GGATCC 1 cut(s) 412
BanI GGYRCC 1 cut(s) 898
BanII GRGCYC 2 cut(s) 141, 481
BbsI GAAGAC 2 cut(s) 1568, 1765
Bbv12I GWGCWC 1 cut(s) 141
BbvI GCAGC 4 cut(s) 673, 955, 1055, 1811
BccI CCATC 4 cut(s) 46, 443, 533, 1549
BceAI ACGGC 1 cut(s) 688
BciT130I CCWGG 2 cut(s) 785, 1567
BciVI GTATCC 1 cut(s) 1720
BclI TGATCA 1 cut(s) 1140
BcoDI GTCTC 2 cut(s) 1525, 1792
BcuI ACTAGT 1 cut(s) 1741
BfaI CTAG 5 cut(s) 482, 525, 573, 1193, 1742
BfmI CTRYAG 3 cut(s) 669, 756, 1766
BfoI RGCGCY 1 cut(s) 1674
BfuI GTATCC 1 cut(s) 1720
BglII AGATCT 1 cut(s) 842
BisI GCNGC 4 cut(s) 687, 969, 1044, 1825
BlsI GCNGC 4 cut(s) 688, 970, 1045, 1826
Bme1390I CCNGG 2 cut(s) 785, 1567
BmiI GGNNCC 3 cut(s) 414, 900, 1264
BmrFI CCNGG 2 cut(s) 785, 1567
BmsI GCATC 6 cut(s) 365, 457, 730, 796, 1021, 1205
BpiI GAAGAC 2 cut(s) 1568, 1765
Bpu14I TTCGAA 1 cut(s) 1490
BpuEI CTTGAG 2 cut(s) 779, 1216
BsaHI GRCGYC 1 cut(s) 1172
BsaJI CCNNGG 3 cut(s) 909, 1033, 1648
BsaXI ACNNNNNCTCC 4 cut(s) 1097, 1127, 1263, 1293
Bse1I ACTGG 2 cut(s) 664, 991
Bse21I CCTNAGG 1 cut(s) 1267
BseBI CCWGG 2 cut(s) 785, 1567
BseDI CCNNGG 3 cut(s) 909, 1033, 1648
BseGI GGATG 5 cut(s) 240, 745, 1012, 1644, 1785
BseMII CTCAG 2 cut(s) 860, 1520
BseNI ACTGG 2 cut(s) 664, 991
BseRI GAGGAG 4 cut(s) 100, 253, 406, 1337
BseXI GCAGC 4 cut(s) 673, 955, 1055, 1811
BseYI CCCAGC 1 cut(s) 331
BsgI GTGCAG 2 cut(s) 465, 1766
Bsh1236I CGCG 1 cut(s) 1650
BshNI GGYRCC 1 cut(s) 898
BsiHKAI GWGCWC 1 cut(s) 141
BslFI GGGAC 1 cut(s) 775
BsmAI GTCTC 2 cut(s) 1525, 1792
BsmFI GGGAC 1 cut(s) 775
Bsp119I TTCGAA 1 cut(s) 1490
Bsp1286I GDGCHC 2 cut(s) 141, 481
Bsp1407I TGTACA 1 cut(s) 1848
Bsp143I GATC 9 cut(s) 63, 412, 453, 527, 631, 772, 842, 1140, 1618
BspACI CCGC 2 cut(s) 1648, 1650
BspCNI CTCAG 2 cut(s) 859, 1521
BspFNI CGCG 1 cut(s) 1650
BspLI GGNNCC 3 cut(s) 414, 900, 1264
BspMAI CTGCAG 1 cut(s) 760
BspPI GGATC 5 cut(s) 407, 420, 461, 522, 1613
BspQI GCTCTTC 1 cut(s) 129
BspT104I TTCGAA 1 cut(s) 1490
BspT107I GGYRCC 1 cut(s) 898
BsrGI TGTACA 1 cut(s) 1848
BsrI ACTGG 2 cut(s) 664, 991
BssECI CCNNGG 3 cut(s) 909, 1033, 1648
BssMI GATC 9 cut(s) 63, 412, 453, 527, 631, 772, 842, 1140, 1618
BssNI GRCGYC 1 cut(s) 1172
BssT1I CCWWGG 1 cut(s) 909
Bst2UI CCWGG 2 cut(s) 785, 1567
Bst4CI ACNGT 5 cut(s) 374, 1063, 1210, 1224, 1861
Bst6I CTCTTC 1 cut(s) 129
BstACI GRCGYC 1 cut(s) 1172
BstAPI GCANNNNNTGC 2 cut(s) 328, 467
BstAUI TGTACA 1 cut(s) 1848
BstBI TTCGAA 1 cut(s) 1490
BstC8I GCNNGC 3 cut(s) 198, 291, 1355
BstDEI CTNAG 5 cut(s) 846, 880, 1267, 1529, 1574
BstDSI CCRYGG 1 cut(s) 1648
BstEII GGTNACC 1 cut(s) 1250
BstF5I GGATG 5 cut(s) 240, 745, 1012, 1644, 1785
BstFNI CGCG 1 cut(s) 1650
BstH2I RGCGCY 1 cut(s) 1674
BstHHI GCGC 1 cut(s) 1673
BstKTI GATC 9 cut(s) 66, 415, 456, 530, 634, 775, 845, 1143, 1621
BstMAI GTCTC 2 cut(s) 1525, 1792
BstMBI GATC 9 cut(s) 63, 412, 453, 527, 631, 772, 842, 1140, 1618
BstMWI GCNNNNNNNGC 7 cut(s) 145, 328, 467, 476, 695, 1193, 1679
BstNI CCWGG 2 cut(s) 785, 1567
BstNSI RCATGY 3 cut(s) 185, 922, 1831
BstPI GGTNACC 1 cut(s) 1250
BstSCI CCNGG 2 cut(s) 783, 1565
BstSFI CTRYAG 3 cut(s) 669, 756, 1766
BstUI CGCG 1 cut(s) 1650
BstV1I GCAGC 4 cut(s) 673, 955, 1055, 1811
BstV2I GAAGAC 2 cut(s) 1568, 1765
BstX2I RGATCY 5 cut(s) 412, 453, 527, 842, 1618
BstYI RGATCY 5 cut(s) 412, 453, 527, 842, 1618
Bsu36I CCTNAGG 1 cut(s) 1267
BsuI GTATCC 1 cut(s) 1720
BtgI CCRYGG 1 cut(s) 1648
BtsCI GGATG 5 cut(s) 240, 745, 1012, 1644, 1785
BtsI GCAGTG 1 cut(s) 1182
BtsIMutI CAGTG 3 cut(s) 657, 1182, 1857
Cac8I GCNNGC 3 cut(s) 198, 291, 1355
CfoI GCGC 1 cut(s) 1673
Cfr42I CCGCGG 1 cut(s) 1651
CsiI ACCWGGT 2 cut(s) 783, 1565
Csp6I GTAC 2 cut(s) 899, 1849
CviAII CATG 9 cut(s) 182, 277, 295, 406, 629, 653, 919, 1591, 1828
CviQI GTAC 2 cut(s) 899, 1849
DdeI CTNAG 5 cut(s) 846, 880, 1267, 1529, 1574
DpnI GATC 9 cut(s) 65, 414, 455, 529, 633, 774, 844, 1142, 1620
DpnII GATC 9 cut(s) 63, 412, 453, 527, 631, 772, 842, 1140, 1618
DraI TTTAAA 3 cut(s) 580, 682, 934
Eam1104I CTCTTC 1 cut(s) 129
EarI CTCTTC 1 cut(s) 129
Ecl136II GAGCTC 1 cut(s) 139
Eco130I CCWWGG 1 cut(s) 909
Eco24I GRGCYC 2 cut(s) 141, 481
Eco53kI GAGCTC 1 cut(s) 139
Eco81I CCTNAGG 1 cut(s) 1267
Eco91I GGTNACC 1 cut(s) 1250
EcoICRI GAGCTC 1 cut(s) 139
EcoO65I GGTNACC 1 cut(s) 1250
EcoRII CCWGG 2 cut(s) 783, 1565
EcoT14I CCWWGG 1 cut(s) 909
EcoT38I GRGCYC 2 cut(s) 141, 481
ErhI CCWWGG 1 cut(s) 909
FaeI CATG 9 cut(s) 185, 280, 298, 409, 632, 656, 922, 1594, 1831
FalI AAGNNNNNCTT 4 cut(s) 492, 524, 1530, 1562
FaqI GGGAC 1 cut(s) 775
FatI CATG 9 cut(s) 181, 276, 294, 405, 628, 652, 918, 1590, 1827
FauNDI CATATG 2 cut(s) 463, 1145
FbaI TGATCA 1 cut(s) 1140
FblI GTMKAC 1 cut(s) 1175
Fnu4HI GCNGC 4 cut(s) 687, 969, 1044, 1825
FokI GGATG 5 cut(s) 247, 752, 999, 1631, 1792
FriOI GRGCYC 2 cut(s) 141, 481
Fsp4HI GCNGC 4 cut(s) 687, 969, 1044, 1825
FspBI CTAG 5 cut(s) 482, 525, 573, 1193, 1742
GlaI GCGC 1 cut(s) 1672
GluI GCNGC 4 cut(s) 687, 969, 1044, 1825
GsaI CCCAGC 1 cut(s) 335
HaeII RGCGCY 1 cut(s) 1674
HhaI GCGC 1 cut(s) 1673
Hin1I GRCGYC 1 cut(s) 1172
Hin1II CATG 9 cut(s) 185, 280, 298, 409, 632, 656, 922, 1594, 1831
Hin6I GCGC 1 cut(s) 1671
HinP1I GCGC 1 cut(s) 1671
HincII GTYRAC 2 cut(s) 49, 1176
HindII GTYRAC 2 cut(s) 49, 1176
HindIII AAGCTT 1 cut(s) 1544
HinfI GANTC 3 cut(s) 314, 430, 597
HphI GGTGA 1 cut(s) 1447
Hpy166II GTNNAC 5 cut(s) 49, 781, 1095, 1176, 1282
Hpy188I TCNGA 6 cut(s) 75, 1034, 1530, 1597, 1731, 1865
Hpy188III TCNNGA 5 cut(s) 434, 635, 796, 1000, 1502
Hpy8I GTNNAC 5 cut(s) 49, 781, 1095, 1176, 1282
Hpy99I CGWCG 1 cut(s) 1177
HpyAV CCTTC 3 cut(s) 239, 377, 1087
HpyCH4III ACNGT 5 cut(s) 374, 1063, 1210, 1224, 1861
HpyCH4IV ACGT 2 cut(s) 1172, 1525
HpyF10VI GCNNNNNNNGC 7 cut(s) 145, 328, 467, 476, 695, 1193, 1679
HpyF3I CTNAG 5 cut(s) 846, 880, 1267, 1529, 1574
HpySE526I ACGT 2 cut(s) 1172, 1525
Hsp92I GRCGYC 1 cut(s) 1172
Hsp92II CATG 9 cut(s) 185, 280, 298, 409, 632, 656, 922, 1594, 1831
HspAI GCGC 1 cut(s) 1671
KpnI GGTACC 1 cut(s) 902
Ksp22I TGATCA 1 cut(s) 1140
KspI CCGCGG 1 cut(s) 1651
Kzo9I GATC 9 cut(s) 63, 412, 453, 527, 631, 772, 842, 1140, 1618
LguI GCTCTTC 1 cut(s) 129
LmnI GCTCC 2 cut(s) 144, 695
Lsp1109I GCAGC 4 cut(s) 673, 955, 1055, 1811
LweI GCATC 6 cut(s) 365, 457, 730, 796, 1021, 1205
MabI ACCWGGT 2 cut(s) 783, 1565
MaeI CTAG 5 cut(s) 482, 525, 573, 1193, 1742
MaeII ACGT 2 cut(s) 1172, 1525
MaeIII GTNAC 7 cut(s) 186, 262, 564, 655, 823, 1250, 1830
MalI GATC 9 cut(s) 65, 414, 455, 529, 633, 774, 844, 1142, 1620
MboI GATC 9 cut(s) 63, 412, 453, 527, 631, 772, 842, 1140, 1618
MboII GAAGA 7 cut(s) 134, 146, 172, 1396, 1550, 1573, 1770
MfeI CAATTG 2 cut(s) 690, 1844
MflI RGATCY 5 cut(s) 412, 453, 527, 842, 1618
MhlI GDGCHC 2 cut(s) 141, 481
MlyI GAGTC 1 cut(s) 323
MmeI TCCRAC 2 cut(s) 796, 1815
MroXI GAANNNNTTC 3 cut(s) 29, 429, 615
MslI CAYNNNNRTG 3 cut(s) 75, 1148, 1362
MspA1I CMGCKG 1 cut(s) 1650
MspR9I CCNGG 2 cut(s) 785, 1567
MunI CAATTG 2 cut(s) 690, 1844
MvaI CCWGG 2 cut(s) 785, 1567
MvnI CGCG 1 cut(s) 1650
MwoI GCNNNNNNNGC 7 cut(s) 145, 328, 467, 476, 695, 1193, 1679
NdeI CATATG 2 cut(s) 463, 1145
NdeII GATC 9 cut(s) 63, 412, 453, 527, 631, 772, 842, 1140, 1618
NlaIII CATG 9 cut(s) 185, 280, 298, 409, 632, 656, 922, 1594, 1831
NlaIV GGNNCC 3 cut(s) 414, 900, 1264
NmuCI GTSAC 4 cut(s) 186, 262, 655, 1830
NspI RCATGY 3 cut(s) 185, 922, 1831
NspV TTCGAA 1 cut(s) 1490
PciI ACATGT 1 cut(s) 918
PciSI GCTCTTC 1 cut(s) 129
PdmI GAANNNNTTC 3 cut(s) 29, 429, 615
PfeI GAWTC 2 cut(s) 430, 597
PkrI GCNGC 4 cut(s) 688, 970, 1045, 1826
PleI GAGTC 1 cut(s) 322
PpsI GAGTC 1 cut(s) 322
PscI ACATGT 1 cut(s) 918
PshBI ATTAAT 1 cut(s) 1608
PsiI TTATAA 1 cut(s) 768
Psp124BI GAGCTC 1 cut(s) 141
Psp6I CCWGG 2 cut(s) 783, 1565
PspEI GGTNACC 1 cut(s) 1250
PspFI CCCAGC 1 cut(s) 331
PspGI CCWGG 2 cut(s) 783, 1565
PspN4I GGNNCC 3 cut(s) 414, 900, 1264
PstI CTGCAG 1 cut(s) 760
PsuI RGATCY 5 cut(s) 412, 453, 527, 842, 1618
RsaI GTAC 2 cut(s) 900, 1850
RsaNI GTAC 2 cut(s) 899, 1849
RseI CAYNNNNRTG 3 cut(s) 75, 1148, 1362
SacI GAGCTC 1 cut(s) 141
SacII CCGCGG 1 cut(s) 1651
SalI GTCGAC 1 cut(s) 1174
SapI GCTCTTC 1 cut(s) 129
SatI GCNGC 4 cut(s) 687, 969, 1044, 1825
Sau3AI GATC 9 cut(s) 63, 412, 453, 527, 631, 772, 842, 1140, 1618
SchI GAGTC 1 cut(s) 323
ScrFI CCNGG 2 cut(s) 785, 1567
SduI GDGCHC 2 cut(s) 141, 481
SexAI ACCWGGT 2 cut(s) 783, 1565
SfaNI GCATC 6 cut(s) 365, 457, 730, 796, 1021, 1205
SfcI CTRYAG 3 cut(s) 669, 756, 1766
Sfr303I CCGCGG 1 cut(s) 1651
SfuI TTCGAA 1 cut(s) 1490
SgrBI CCGCGG 1 cut(s) 1651
SmiMI CAYNNNNRTG 3 cut(s) 75, 1148, 1362
SmlI CTYRAG 2 cut(s) 794, 1231
SmoI CTYRAG 2 cut(s) 794, 1231
SpeI ACTAGT 1 cut(s) 1741
SsiI CCGC 2 cut(s) 1648, 1650
SspI AATATT 1 cut(s) 100
SspMI CTAG 5 cut(s) 482, 525, 573, 1193, 1742
SstI GAGCTC 1 cut(s) 141
StyD4I CCNGG 2 cut(s) 783, 1565
StyI CCWWGG 1 cut(s) 909
TaaI ACNGT 5 cut(s) 374, 1063, 1210, 1224, 1861
TaiI ACGT 2 cut(s) 1175, 1528
TaqI TCGA 7 cut(s) 269, 312, 624, 804, 1175, 1433, 1490
TatI WGTACW 1 cut(s) 1848
TfiI GAWTC 2 cut(s) 430, 597
TscAI CASTG 3 cut(s) 664, 1189, 1864
TseFI GTSAC 4 cut(s) 186, 262, 655, 1830
TseI GCWGC 4 cut(s) 686, 968, 1043, 1824
Tsp45I GTSAC 4 cut(s) 186, 262, 655, 1830
TspDTI ATGAA 8 cut(s) 22, 72, 135, 293, 311, 723, 1038, 1690
TspGWI ACGGA 1 cut(s) 1118
TspRI CASTG 3 cut(s) 664, 1189, 1864
VspI ATTAAT 1 cut(s) 1608
XapI RAATTY 6 cut(s) 280, 298, 514, 751, 800, 1288
XceI RCATGY 3 cut(s) 185, 922, 1831
XmiI GTMKAC 1 cut(s) 1175
XmnI GAANNNNTTC 3 cut(s) 29, 429, 615
XspI CTAG 5 cut(s) 482, 525, 573, 1193, 1742
ZraI GACGTC 1 cut(s) 1173
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.