RLG00000029650

Glutamate receptor

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
Physical Location & Seq
Forward (+)
42125169 .. 42129423
4255 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029650

Sequence Viewer

Length: 2427 bp
ATGGAGTTTCAAGGGAAGAAGCAAACCATTTTCTGCCTATCCTTTGTGACGTTATGCCTCCTGGGTGACATTTTTGCTCAAAGTAATGAGGAATTAATGCATTATGATAATAATCCGCTAACTGTGGAAGAGGTTCATGTCGGTGTGATTCTGGATATGCAATCAAGGGAAGGAAAGATTGTACTCGGCTGCATTTCGACGGCTCTGTCGGACTTTTATCATCTGCATAATAATTACAGCACAAGAGTGGTACTCCACAGTAGAGACTCCAGTGGAAAACATCTGCATACTCTATCAGCTGCTCTTGATCTTTTGAATAACAACAAAGTGGAAGCAATAATTGGTGCACAAACAAGAATGGAAGCAAACCTATTGGCGGATTTAGGAGAAGATGTTGGAGTCCCTATATTGTCTCTATCTCAACCTAGTCTAGCTCTTCCTCTGACTGACAAAAATCCCTTCTTTGTTGAGGTCACACAGGATGAAACTTTGCAGGTTACAGGGATCACTGCTCTTATTGAAATGTTCACATGGAGAAATGTTGTCCTTCTATATGAGAGGACAAATCATGCAAGTGACATAATTCCATCTTTGATCAATTCCTTCCAAGAGAAAAATGTCTATATTGCATATATAAGTTCCATTTCTGTTTCCTCAACGACTGAACAAATCATTAAAGAGCTTCAAAAGCTAAAGGCATTAGACAATACAGTATTTGTGGTGCATATCTCACATTTTCTTATACCTCGGCTTTTTATGGATGCAAAGAAGCTAGGAATGATGAGTGAAGGGTATGCTTGGATTCTGACATCAACAAGCTTGAATTTCTTGAATTCTATGGATTCTGCTGTGATTGAATCAATGCAAGGAGTGCTGGGGTTGAAGTCGCATATTCCAACTTCAAGGAGCCTCCATAATCTTACTTCTAGATTGAGGAGAAAATTGTACATCGAGGAGTCCCATATGGAAGTACTGGAATTAAGTGCTGATGCAATCTGGGCATATGATGCAACTTGGGTCCTAGCAGAAGCACTTGAGAGGTCACGGATTAAAATTTCTACAAGACTAAATCGAAAGGATTTAAACGATATTAAATCCTCTAAGCCTGGAAGTGTGCTTCGTGAAGAAATACTGCAAAGTAGGGTTAAAGGATTAAGTGGTGAAATTCAGTATCCAAAGCAGAAGCTAATTGCAGACAAACTTGAGATAGTAAATGTGATAGGGAAGGGGGAGAGAAGAATTGGAATTTTGACTTTTGAAGAAGAAAAAACAAAAGAATCACAATCCCTTAAAAGCAAAAGAAATTTACTTTCCACCAGTGATTTGGAAACTGTCATATGGCCTGGAGGATCATCAACCATTACGAAAGGTTCCAAGAGGAAATTGAGTGAAACAAAATTGAGAGTTGGTGTTCCCGCAAAGACAGGGTTCGAGGAACTTGTGCATATGAAACATGACTTCCAAACCAATAAAACATATTTCACAGGCTTCTGTATAGATGTGTTTGAAACTGCAATAAGAGGATTGCCCTACAAAGTACAATATGAGTTTATTCCATTTGAGGATGCTAATGGGACATACAACGATCTTGTTTACCAGGTTTATCTCCAGAAGTTGATGAACAATTCAGCAAAGTTTGTAGTGGTCATATGGGTTTTTGTAGTTCTTATATTGACTTCTAGTTACACAGCAACTTTAGCATCAATGATGACGGTTAAACAAATGCAATTAAATGCCAGAGAGAACTACATAGGTTACCAGGTTCATTCACTGATCACTACACAAGTTATAGAGAACTTGAATTTCAGAGGGGCTAAACCATATGAATCAGTTGAAGCATATGCTGATGCTTTATCAAGAGGGAGTAAGCATGGTGGTGTCTCTGCTATTATTGATGAGGTACCATACATTAAGGTCTTCCTTGGAAAGTATTCTGAGGGCTACTCCATGATTAAACCCGAGTCTGCTACCAATGGTTTTGGCTTTGCTTTCCCTAAAGGCTCGAAATTGGCACATGACATGTCAGTGCAAATTGAAAAATTGAGAGAAGAAGGAAAGCTTTTAGAGATGGAAAAGGCCTGGTTTCATTATAATGGCAATCACATGTTTGAGGACACAACAAGCCGTCCCAATAGTCTTAATCTCAGCAGCTTTCGTGGTTTATTCCTTGTTACTGGGGTTTCTTCAGCTTTTGCTCTTTTTTTGTTCACAATTTCCCCACTCAGAGAGAAGTGGCAACTTGTGAAGAAATGCAGATATCTTGTTCAGGCCGTTAAGGCAGTAACCTTGACAGCTGTTCATCAGGATTTAGGATCAACAACATCACTGCACCGCTGCTTTGGAATGTCATCAAATTTCAAAGGCCTTCATTTCATCTTGAAGGTCAATATATGGTTGCCCGGAAGACCCTCATGGTATTATGTGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.

Protein Analysis

809

Amino Acids

91.12

Weight (kDa)

8.39

Isoelectric Point (pI)

36.59

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 45 - 349 2.3e-09 Periplasmic binding protein
ANF_receptor PF01094 64 - 408 7.9e-60 Receptor family ligand binding region
Lig_chan PF00060 536 - 727 1.6e-14 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2091
AasI GACNNNNNNGTC 1 cut(s) 205
Acc36I ACCTGC 1 cut(s) 484
Acc65I GGTACC 1 cut(s) 1900
AccB1I GGYRCC 1 cut(s) 1900
AciI CCGC 4 cut(s) 116, 377, 1416, 2332
AclWI GGATC 3 cut(s) 512, 1357, 2320
AcsI RAATTY 8 cut(s) 823, 832, 1053, 1164, 1245, 1303, 1801, 2353
AcuI CTGAAG 1 cut(s) 2169
AfaI GTAC 6 cut(s) 183, 252, 947, 972, 1539, 1902
AfiI CCNNNNNNNGG 1 cut(s) 376
AflIII ACRYGT 2 cut(s) 2019, 2103
AjnI CCWGG 6 cut(s) 60, 1105, 1342, 1596, 1758, 2078
AjuI GAANNNNNNNTTGG 2 cut(s) 324, 356
AleI CACNNNNGTG 1 cut(s) 245
Alw21I GWGCWC 1 cut(s) 349
Alw26I GTCTC 3 cut(s) 258, 417, 1885
Alw44I GTGCAC 1 cut(s) 345
AlwI GGATC 3 cut(s) 512, 1357, 2320
Ama87I CYCGRG 1 cut(s) 1958
AoxI GGCC 4 cut(s) 1340, 2076, 2268, 2362
ApaLI GTGCAC 1 cut(s) 345
ApeKI GCWGC 4 cut(s) 189, 299, 2148, 2334
ApoI RAATTY 8 cut(s) 823, 832, 1053, 1164, 1245, 1303, 1801, 2353
AseI ATTAAT 1 cut(s) 95
Asp700I GAANNNNTTC 2 cut(s) 132, 1930
Asp718I GGTACC 1 cut(s) 1900
AspS9I GGNCC 1 cut(s) 1018
AsuC2I CCSGG 1 cut(s) 2400
AsuHPI GGTGA 2 cut(s) 77, 1172
AvaI CYCGRG 1 cut(s) 1958
AvaII GGWCC 1 cut(s) 1018
BaeGI GKGCMC 1 cut(s) 349
BanI GGYRCC 1 cut(s) 1900
BbsI GAAGAC 2 cut(s) 1909, 2410
Bbv12I GWGCWC 1 cut(s) 349
BbvI GCAGC 4 cut(s) 176, 286, 2160, 2321
BccI CCATC 2 cut(s) 595, 2062
BceAI ACGGC 3 cut(s) 216, 2109, 2255
BciT130I CCWGG 6 cut(s) 62, 1107, 1344, 1598, 1760, 2080
BciVI GTATCC 1 cut(s) 1182
BclI TGATCA 2 cut(s) 594, 1773
BcnI CCSGG 1 cut(s) 2400
BcoDI GTCTC 3 cut(s) 258, 417, 1885
BfaI CTAG 6 cut(s) 426, 431, 773, 927, 1022, 1680
BfuAI ACCTGC 1 cut(s) 484
BfuI GTATCC 1 cut(s) 1182
BglI GCCNNNNNGGC 1 cut(s) 2276
BisI GCNGC 4 cut(s) 190, 300, 2149, 2335
BlsI GCNGC 4 cut(s) 191, 301, 2150, 2336
BmcAI AGTACT 1 cut(s) 972
Bme1390I CCNGG 7 cut(s) 62, 1107, 1344, 1598, 1760, 2080, 2400
Bme18I GGWCC 1 cut(s) 1018
BmeT110I CYCGRG 1 cut(s) 1958
BmgT120I GGNCC 1 cut(s) 1018
BmiI GGNNCC 4 cut(s) 908, 1019, 1372, 1902
BmrFI CCNGG 7 cut(s) 62, 1107, 1344, 1598, 1760, 2080, 2400
BmrI ACTGGG 1 cut(s) 2184
BmsI GCATC 6 cut(s) 751, 979, 997, 1555, 1709, 1837
BmuI ACTGGG 1 cut(s) 2184
BpiI GAAGAC 2 cut(s) 1909, 2410
BplI GAGNNNNNCTC 4 cut(s) 237, 269, 1928, 1960
BpmI CTGGAG 3 cut(s) 253, 1365, 1592
BpuEI CTTGAG 2 cut(s) 1055, 1223
BpuMI CCSGG 1 cut(s) 2400
BsaBI GATNNNNATC 1 cut(s) 111
BsaJI CCNNGG 3 cut(s) 61, 746, 1921
BsaXI ACNNNNNCTCC 2 cut(s) 378, 408
Bsc4I CCNNNNNNNGG 1 cut(s) 376
Bse1I ACTGG 4 cut(s) 270, 978, 1317, 2179
Bse8I GATNNNNATC 1 cut(s) 111
BseBI CCWGG 6 cut(s) 62, 1107, 1344, 1598, 1760, 2080
BseDI CCNNGG 3 cut(s) 61, 746, 1921
BseGI GGATG 3 cut(s) 487, 766, 1570
BseJI GATNNNNATC 1 cut(s) 111
BseLI CCNNNNNNNGG 1 cut(s) 376
BseMII CTCAG 3 cut(s) 1926, 2158, 2236
BseNI ACTGG 4 cut(s) 270, 978, 1317, 2179
BseRI GAGGAG 2 cut(s) 949, 968
BseSI GKGCMC 1 cut(s) 349
BseXI GCAGC 4 cut(s) 176, 286, 2160, 2321
BseYI CCCAGC 1 cut(s) 874
BsgI GTGCAG 1 cut(s) 2312
BshFI GGCC 4 cut(s) 1342, 2078, 2270, 2364
BshNI GGYRCC 1 cut(s) 1900
BsiHKAI GWGCWC 1 cut(s) 349
BsiHKCI CYCGRG 1 cut(s) 1958
BsiSI CCGG 1 cut(s) 2400
BslFI GGGAC 4 cut(s) 386, 943, 1588, 2112
BslI CCNNNNNNNGG 1 cut(s) 376
BsmAI GTCTC 3 cut(s) 258, 417, 1885
BsmFI GGGAC 4 cut(s) 386, 943, 1588, 2112
BsnI GGCC 4 cut(s) 1342, 2078, 2270, 2364
BsoBI CYCGRG 1 cut(s) 1958
Bsp1286I GDGCHC 1 cut(s) 349
Bsp1407I TGTACA 1 cut(s) 945
Bsp143I GATC 7 cut(s) 307, 504, 594, 1349, 1585, 1773, 2312
BspACI CCGC 4 cut(s) 116, 377, 1416, 2332
BspANI GGCC 4 cut(s) 1342, 2078, 2270, 2364
BspCNI CTCAG 3 cut(s) 1927, 2157, 2235
BspLI GGNNCC 4 cut(s) 908, 1019, 1372, 1902
BspMI ACCTGC 1 cut(s) 484
BspPI GGATC 3 cut(s) 512, 1357, 2320
BspQI GCTCTTC 1 cut(s) 441
BspT107I GGYRCC 1 cut(s) 1900
BsrGI TGTACA 1 cut(s) 945
BsrI ACTGG 4 cut(s) 270, 978, 1317, 2179
BssECI CCNNGG 3 cut(s) 61, 746, 1921
BssMI GATC 7 cut(s) 307, 504, 594, 1349, 1585, 1773, 2312
BssT1I CCWWGG 1 cut(s) 1921
Bst2UI CCWGG 6 cut(s) 62, 1107, 1344, 1598, 1760, 2080
Bst4CI ACNGT 5 cut(s) 124, 260, 712, 1333, 1714
Bst6I CTCTTC 2 cut(s) 123, 441
BstAPI GCANNNNNTGC 2 cut(s) 871, 1007
BstAUI TGTACA 1 cut(s) 945
BstDEI CTNAG 4 cut(s) 1101, 1935, 2144, 2222
BstEII GGTNACC 1 cut(s) 1754
BstF5I GGATG 3 cut(s) 487, 766, 1570
BstKTI GATC 7 cut(s) 310, 507, 597, 1352, 1588, 1776, 2315
BstMAI GTCTC 3 cut(s) 258, 417, 1885
BstMBI GATC 7 cut(s) 307, 504, 594, 1349, 1585, 1773, 2312
BstMWI GCNNNNNNNGC 6 cut(s) 688, 871, 998, 1007, 1697, 2276
BstNI CCWGG 6 cut(s) 62, 1107, 1344, 1598, 1760, 2080
BstNSI RCATGY 2 cut(s) 2023, 2107
BstPI GGTNACC 1 cut(s) 1754
BstSCI CCNGG 7 cut(s) 60, 1105, 1342, 1596, 1758, 2078, 2398
BstSLI GKGCMC 1 cut(s) 349
BstV1I GCAGC 4 cut(s) 176, 286, 2160, 2321
BstV2I GAAGAC 2 cut(s) 1909, 2410
BstXI CCANNNNNNTGG 1 cut(s) 1324
BsuI GTATCC 1 cut(s) 1182
BsuRI GGCC 4 cut(s) 1342, 2078, 2270, 2364
BtsCI GGATG 3 cut(s) 487, 766, 1570
BtsI GCAGTG 2 cut(s) 507, 2324
BtsIMutI CAGTG 6 cut(s) 277, 507, 1324, 1769, 2031, 2324
BveI ACCTGC 1 cut(s) 484
Cfr13I GGNCC 1 cut(s) 1018
CsiI ACCWGGT 2 cut(s) 1596, 1758
Csp6I GTAC 6 cut(s) 182, 251, 946, 971, 1538, 1901
CviQI GTAC 6 cut(s) 182, 251, 946, 971, 1538, 1901
DdeI CTNAG 4 cut(s) 1101, 1935, 2144, 2222
DpnI GATC 7 cut(s) 309, 506, 596, 1351, 1587, 1775, 2314
DpnII GATC 7 cut(s) 307, 504, 594, 1349, 1585, 1773, 2312
DraI TTTAAA 1 cut(s) 1083
DrdI GACNNNNNNGTC 1 cut(s) 205
DseDI GACNNNNNNGTC 1 cut(s) 205
Eam1104I CTCTTC 2 cut(s) 123, 441
EarI CTCTTC 2 cut(s) 123, 441
EciI GGCGGA 1 cut(s) 392
Eco130I CCWWGG 1 cut(s) 1921
Eco147I AGGCCT 2 cut(s) 2078, 2364
Eco32I GATATC 1 cut(s) 2258
Eco47I GGWCC 1 cut(s) 1018
Eco57I CTGAAG 1 cut(s) 2169
Eco88I CYCGRG 1 cut(s) 1958
Eco91I GGTNACC 1 cut(s) 1754
EcoO109I RGGNCCY 1 cut(s) 1018
EcoO65I GGTNACC 1 cut(s) 1754
EcoRI GAATTC 1 cut(s) 832
EcoRII CCWGG 6 cut(s) 60, 1105, 1342, 1596, 1758, 2078
EcoRV GATATC 1 cut(s) 2258
EcoT14I CCWWGG 1 cut(s) 1921
EcoT22I ATGCAT 1 cut(s) 102
ErhI CCWWGG 1 cut(s) 1921
FalI AAGNNNNNCTT 2 cut(s) 2043, 2075
FaqI GGGAC 4 cut(s) 386, 943, 1588, 2112
FauI CCCGC 1 cut(s) 1423
FauNDI CATATG 7 cut(s) 963, 1003, 1337, 1446, 1649, 1822, 1840
FbaI TGATCA 2 cut(s) 594, 1773
Fnu4HI GCNGC 4 cut(s) 190, 300, 2149, 2335
FokI GGATG 3 cut(s) 494, 773, 1577
Fsp4HI GCNGC 4 cut(s) 190, 300, 2149, 2335
FspBI CTAG 6 cut(s) 426, 431, 773, 927, 1022, 1680
GluI GCNGC 4 cut(s) 190, 300, 2149, 2335
GsaI CCCAGC 1 cut(s) 878
GsuI CTGGAG 3 cut(s) 253, 1365, 1592
HaeIII GGCC 4 cut(s) 1342, 2078, 2270, 2364
HapII CCGG 1 cut(s) 2400
HindIII AAGCTT 2 cut(s) 817, 2057
HpaII CCGG 1 cut(s) 2400
HphI GGTGA 2 cut(s) 77, 1172
Hpy166II GTNNAC 4 cut(s) 347, 528, 1594, 2208
Hpy188I TCNGA 6 cut(s) 211, 444, 807, 1808, 1936, 2225
Hpy188III TCNNGA 9 cut(s) 152, 305, 829, 927, 1121, 1609, 1857, 2303, 2377
Hpy8I GTNNAC 4 cut(s) 347, 528, 1594, 2208
Hpy99I CGWCG 1 cut(s) 202
HpyAV CCTTC 9 cut(s) 164, 469, 557, 613, 782, 1219, 2045, 2374, 2375
HpyCH4III ACNGT 5 cut(s) 124, 260, 712, 1333, 1714
HpyCH4IV ACGT 1 cut(s) 50
HpyF10VI GCNNNNNNNGC 6 cut(s) 688, 871, 998, 1007, 1697, 2276
HpyF3I CTNAG 4 cut(s) 1101, 1935, 2144, 2222
HpySE526I ACGT 1 cut(s) 50
KpnI GGTACC 1 cut(s) 1904
Ksp22I TGATCA 2 cut(s) 594, 1773
Kzo9I GATC 7 cut(s) 307, 504, 594, 1349, 1585, 1773, 2312
LguI GCTCTTC 1 cut(s) 441
LmnI GCTCC 1 cut(s) 906
Lsp1109I GCAGC 4 cut(s) 176, 286, 2160, 2321
LweI GCATC 6 cut(s) 751, 979, 997, 1555, 1709, 1837
MabI ACCWGGT 2 cut(s) 1596, 1758
MaeI CTAG 6 cut(s) 426, 431, 773, 927, 1022, 1680
MaeII ACGT 1 cut(s) 50
MalI GATC 7 cut(s) 309, 506, 596, 1351, 1587, 1775, 2314
MboI GATC 7 cut(s) 307, 504, 594, 1349, 1585, 1773, 2312
MhlI GDGCHC 1 cut(s) 349
MlyI GAGTC 4 cut(s) 260, 408, 965, 1970
MmeI TCCRAC 3 cut(s) 189, 376, 920
Mph1103I ATGCAT 1 cut(s) 102
MroXI GAANNNNTTC 2 cut(s) 132, 1930
MslI CAYNNNNRTG 6 cut(s) 141, 245, 573, 1875, 2024, 2091
MspA1I CMGCKG 3 cut(s) 299, 2294, 2334
MspI CCGG 1 cut(s) 2400
MspR9I CCNGG 7 cut(s) 62, 1107, 1344, 1598, 1760, 2080, 2400
MvaI CCWGG 6 cut(s) 62, 1107, 1344, 1598, 1760, 2080
MwoI GCNNNNNNNGC 6 cut(s) 688, 871, 998, 1007, 1697, 2276
NciI CCSGG 1 cut(s) 2400
NdeI CATATG 7 cut(s) 963, 1003, 1337, 1446, 1649, 1822, 1840
NdeII GATC 7 cut(s) 307, 504, 594, 1349, 1585, 1773, 2312
NlaIV GGNNCC 4 cut(s) 908, 1019, 1372, 1902
NmeAIII GCCGAG 2 cut(s) 165, 727
NmuCI GTSAC 5 cut(s) 46, 65, 472, 575, 1041
NsiI ATGCAT 1 cut(s) 102
NspI RCATGY 2 cut(s) 2023, 2107
OliI CACNNNNGTG 1 cut(s) 245
PceI AGGCCT 2 cut(s) 2078, 2364
PciI ACATGT 2 cut(s) 2019, 2103
PciSI GCTCTTC 1 cut(s) 441
PdmI GAANNNNTTC 2 cut(s) 132, 1930
PfeI GAWTC 6 cut(s) 148, 802, 842, 857, 1277, 1826
PkrI GCNGC 4 cut(s) 191, 301, 2150, 2336
PleI GAGTC 4 cut(s) 260, 407, 964, 1969
PpsI GAGTC 4 cut(s) 260, 407, 964, 1969
PpuMI RGGWCCY 1 cut(s) 1018
PscI ACATGT 2 cut(s) 2019, 2103
PshBI ATTAAT 1 cut(s) 95
PsiI TTATAA 1 cut(s) 2091
Psp5II RGGWCCY 1 cut(s) 1018
Psp6I CCWGG 6 cut(s) 60, 1105, 1342, 1596, 1758, 2078
PspEI GGTNACC 1 cut(s) 1754
PspFI CCCAGC 1 cut(s) 874
PspGI CCWGG 6 cut(s) 60, 1105, 1342, 1596, 1758, 2078
PspN4I GGNNCC 4 cut(s) 908, 1019, 1372, 1902
PspPI GGNCC 1 cut(s) 1018
PspPPI RGGWCCY 1 cut(s) 1018
PvuII CAGCTG 2 cut(s) 299, 2294
RsaI GTAC 6 cut(s) 183, 252, 947, 972, 1539, 1902
RsaNI GTAC 6 cut(s) 182, 251, 946, 971, 1538, 1901
RseI CAYNNNNRTG 6 cut(s) 141, 245, 573, 1875, 2024, 2091
SapI GCTCTTC 1 cut(s) 441
SatI GCNGC 4 cut(s) 190, 300, 2149, 2335
Sau3AI GATC 7 cut(s) 307, 504, 594, 1349, 1585, 1773, 2312
Sau96I GGNCC 1 cut(s) 1018
ScaI AGTACT 1 cut(s) 972
SchI GAGTC 4 cut(s) 260, 408, 965, 1970
ScrFI CCNGG 7 cut(s) 62, 1107, 1344, 1598, 1760, 2080, 2400
SduI GDGCHC 1 cut(s) 349
SexAI ACCWGGT 2 cut(s) 1596, 1758
SfaNI GCATC 6 cut(s) 751, 979, 997, 1555, 1709, 1837
SinI GGWCC 1 cut(s) 1018
SmiMI CAYNNNNRTG 6 cut(s) 141, 245, 573, 1875, 2024, 2091
SmlI CTYRAG 2 cut(s) 1034, 1202
SmoI CTYRAG 2 cut(s) 1034, 1202
SseBI AGGCCT 2 cut(s) 2078, 2364
SsiI CCGC 4 cut(s) 116, 377, 1416, 2332
SspMI CTAG 6 cut(s) 426, 431, 773, 927, 1022, 1680
StuI AGGCCT 2 cut(s) 2078, 2364
StyD4I CCNGG 7 cut(s) 60, 1105, 1342, 1596, 1758, 2078, 2398
StyI CCWWGG 1 cut(s) 1921
TaaI ACNGT 5 cut(s) 124, 260, 712, 1333, 1714
TaiI ACGT 1 cut(s) 53
TaqI TCGA 5 cut(s) 197, 951, 1072, 1431, 2003
TatI WGTACW 4 cut(s) 181, 945, 970, 1537
TfiI GAWTC 6 cut(s) 148, 802, 842, 857, 1277, 1826
TscAI CASTG 6 cut(s) 277, 514, 1324, 1776, 2031, 2331
TseFI GTSAC 5 cut(s) 46, 65, 472, 575, 1041
TseI GCWGC 4 cut(s) 189, 299, 2148, 2334
Tsp45I GTSAC 5 cut(s) 46, 65, 472, 575, 1041
TspGWI ACGGA 1 cut(s) 1060
TspRI CASTG 6 cut(s) 277, 514, 1324, 1776, 2031, 2331
VneI GTGCAC 1 cut(s) 345
VpaK11BI GGWCC 1 cut(s) 1018
VspI ATTAAT 1 cut(s) 95
XapI RAATTY 8 cut(s) 823, 832, 1053, 1164, 1245, 1303, 1801, 2353
XbaI TCTAGA 1 cut(s) 926
XceI RCATGY 2 cut(s) 2023, 2107
XcmI CCANNNNNNNNNTGG 1 cut(s) 1321
XmnI GAANNNNTTC 2 cut(s) 132, 1930
XspI CTAG 6 cut(s) 426, 431, 773, 927, 1022, 1680
ZrmI AGTACT 1 cut(s) 972
Zsp2I ATGCAT 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.