Rw1G014130

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000294
Physical Location & Seq
Reverse (-)
31500683 .. 31504831
4149 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G014130.1

Sequence Viewer

Length: 2136 bp
ATGGAGTTTCAAGGGAAGCAGCAAACCATTTTCTGCCTATCCCTTGTGACCTTTTGCCTCCTCGGTGACATTTTTGCTCAAAGTAACGAAGAATTAAGGCATTATGATAATAATCCGCTAACTGTGGAAGAGGTTCATGTCGGTGTGATTCTGGATATGCAATCAAGCGAAGGAAAGATTGTAATCGGCTGCATTTCGACGGCTCTATCAGATTTTTATCATCTGCATAATAATTACAGCACAAGAGTGGTACTCCACAGCAGAGACTCCAGTGGAAAACATCTGCATGCTCTATCAGCTGCTCTTGATCTTTTGAATAACATCAAAGTGGAAGCAATAATTGGTGCACAAACAAGAATGGAAGCAAACCTATTAGCGGATTTAGGAGAAGATGTTGAAGTCCCTATATTTTCTCTATCTCAACCTAGTCTAGCTCCTCTGCCCGACAAAAATCCCTTCTTTGTTGAGGTCACACAGGATGAAACTGTGCAGGTTACAGGGATCACTGCTCTTATTGAAATGGTCATATGGAGAAATGTTATCCTTCTATATGAGAGGACAAATCATGAAAGTGACATAATTCCATCTTTGATCAATTCCTTCCAAGAGAAAAATATCGATATTACATATATAAGTTCCATTTCTGCCTCCTCAACAACTGAACAAATCATTGAAGAGCTTCAAATCCTAAAGGCATTAGACAATACAGTATTTGTGGTGCATATCTCAAATTTTCTTGTGCCTCGGCTTTTTATGAATGCAAAGAAGCTAGGAATGATGAGAGTGCTGGGGTTGAAGTCGTATATTCCAACTTCAAGGAGCCTCCACAATCTTACTTCTAGATTGAGGAGAAAATTGTACATTGAGGAGTCTCATATGGAAGTACTAGACCCATCACTTTCTTTTACCCATCATCTCTCATCTCCAGATCTTGTTGCCTGGATTTCTTCTATTCCATTTCAAATCGGTACCATGGCTTGTGCTGATGCAATCTGGGCATATGATGCAACTTGGGTCCTAGCAGAAGCAGTTGAGAGGTCACAGATTAAAATTTCTACAAGACTAAACCGAAAGGATTTAAAAGATATTGAATCCTCTAAGCCTGGAAGTGTGCTTCTTGAAGAGTTACTGCAAAGTAGGGTTAAAGGGTTAAGTGGTGAAATTCAGTATCCAAAGCAGAAACTAATTGCAGACAAACTTGAGATAGTAAAATTTTTGACTTTTGAAGATGAAAAAACAAAAGAATCACAGTCCCTTAAAAACAAAAGAAATTTACTTTCCACCAGATCATCAACCATTACGAAAGGTTCCAAGAAGAAATTGAGTGAAACAAAATTAAGAGTTGGTGTCCCCCCAAAGAGAGGGTTCGAGGAACTTGTGCATGTGAAACATGACTTCCAAACCAACAAAACATATTTCACAGGTTTCTGTATAGATGTGTTTGAAACTGCAATAAGAGGATTGCCCTATAAAGTACAATATGAGTTTATTCCATTTGAGGATGCTAATGGACTTTTGGCTGGGACATACAACGATCTTGTTTACCAGATTCATCTTCAGAAATATGATGTTGTTGTTGGAGATACGACAATCACATCAAACCGATCGTTATATGTTGATTTTACAGTACCATATCCTGACTTGGGCATGGGAACGCTGGTAGCAAATGAAAAGGAAAACATGTGGATTTTCTTAAGACCTCTTTCAACAGACCTTTGGATGACAAAGTTGTTAAACAATTCAGCAAAGTTTGTAGTGATCGCATGGTTTTTTGTAGTTCTTATATTGACTTCTAGTTACACTGCAACTTTAACATCAATGATGACAGTTAAACAAATGCAATTGAACGCCAGAGGGAACTACAACTTGAATTTCAAAGGGGCTGAACCATATAGTTCAGTTGAAGCATATGCTGATGCTTTGTCAAGAGGAAGCAAGCATGGTGGTGTTTCTGCTATTGTTGACGAGGTACCATACATTAAGGTCTTCCTTGCAAAGTATTCTGAGGGCTACTCTATGATTAAAACCGAGTCTACTACCAATGGTTTTGGCTTTGTTTTCCCCAAAGGTTCGCAATTGGTCCACGACATGTCAAAGCAAATTGAAACTTTGAGAGAAGAAGGCAAGCTACCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan Lig_chan-Glu_bd SBP_bac_3

Protein Analysis

711

Amino Acids

80.1

Weight (kDa)

6.1

Isoelectric Point (pI)

41.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 66 - 403 1.4e-43 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 464 - 556 6.4e-10 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 466 - 710 4.5e-09 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 574 - 623 2.3e-11 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 481
Acc65I GGTACC 2 cut(s) 968, 1969
AccB1I GGYRCC 2 cut(s) 968, 1969
AccI GTMKAC 1 cut(s) 2033
AciI CCGC 2 cut(s) 116, 377
AclWI GGATC 1 cut(s) 509
AcsI RAATTY 6 cut(s) 730, 1050, 1161, 1211, 1270, 1870
AcuI CTGAAG 1 cut(s) 1541
AfaI GTAC 7 cut(s) 252, 860, 885, 970, 1476, 1629, 1971
AfiI CCNNNNNNNGG 3 cut(s) 376, 1361, 1643
AflII CTTAAG 1 cut(s) 1693
AflIII ACRYGT 2 cut(s) 1680, 2088
AjnI CCWGG 2 cut(s) 938, 1102
AjuI GAANNNNNNNTTGG 2 cut(s) 324, 356
AleI CACNNNNGTG 1 cut(s) 245
AluBI AGCT 5 cut(s) 299, 434, 679, 769, 2128
AluI AGCT 5 cut(s) 299, 434, 679, 769, 2128
Alw21I GWGCWC 1 cut(s) 349
Alw26I GTCTC 2 cut(s) 258, 876
Alw44I GTGCAC 1 cut(s) 345
AlwI GGATC 1 cut(s) 509
ApaLI GTGCAC 1 cut(s) 345
ApeKI GCWGC 3 cut(s) 19, 189, 299
ApoI RAATTY 6 cut(s) 730, 1050, 1161, 1211, 1270, 1870
Asp700I GAANNNNTTC 2 cut(s) 132, 678
Asp718I GGTACC 2 cut(s) 968, 1969
AspS9I GGNCC 2 cut(s) 1015, 2080
AsuHPI GGTGA 2 cut(s) 77, 1169
AvaII GGWCC 2 cut(s) 1015, 2080
BaeGI GKGCMC 1 cut(s) 349
BanI GGYRCC 2 cut(s) 968, 1969
BarI GAAGNNNNNNTAC 1 cut(s) 2112
BbsI GAAGAC 1 cut(s) 1978
Bbv12I GWGCWC 1 cut(s) 349
BbvI GCAGC 3 cut(s) 31, 176, 286
BccI CCATC 3 cut(s) 592, 901, 918
BceAI ACGGC 1 cut(s) 216
BciT130I CCWGG 2 cut(s) 940, 1104
BciVI GTATCC 1 cut(s) 1179
BclI TGATCA 1 cut(s) 591
BcoDI GTCTC 2 cut(s) 258, 876
BfaI CTAG 7 cut(s) 426, 431, 770, 840, 887, 1019, 1794
BfrI CTTAAG 1 cut(s) 1693
BfuAI ACCTGC 1 cut(s) 481
BfuI GTATCC 1 cut(s) 1179
BglII AGATCT 1 cut(s) 928
BisI GCNGC 3 cut(s) 20, 190, 300
BlsI GCNGC 3 cut(s) 21, 191, 301
BmcAI AGTACT 1 cut(s) 885
Bme1390I CCNGG 2 cut(s) 940, 1104
Bme18I GGWCC 2 cut(s) 1015, 2080
BmgT120I GGNCC 2 cut(s) 1015, 2080
BmiI GGNNCC 5 cut(s) 821, 970, 1016, 1309, 1971
BmrFI CCNGG 2 cut(s) 940, 1104
BmsI GCATC 4 cut(s) 976, 994, 1492, 1906
BpiI GAAGAC 1 cut(s) 1978
BplI GAGNNNNNCTC 4 cut(s) 237, 269, 1997, 2029
BpmI CTGGAG 2 cut(s) 253, 909
BpuEI CTTGAG 1 cut(s) 1220
Bsa29I ATCGAT 1 cut(s) 618
BsaBI GATNNNNATC 3 cut(s) 111, 182, 216
BsaJI CCNNGG 3 cut(s) 61, 743, 972
BsaXI ACNNNNNCTCC 2 cut(s) 378, 408
Bsc4I CCNNNNNNNGG 3 cut(s) 376, 1361, 1643
Bse1I ACTGG 1 cut(s) 270
Bse8I GATNNNNATC 3 cut(s) 111, 182, 216
BseBI CCWGG 2 cut(s) 940, 1104
BseCI ATCGAT 1 cut(s) 618
BseDI CCNNGG 3 cut(s) 61, 743, 972
BseGI GGATG 3 cut(s) 484, 1507, 1725
BseJI GATNNNNATC 3 cut(s) 111, 182, 216
BseLI CCNNNNNNNGG 3 cut(s) 376, 1361, 1643
BseMII CTCAG 1 cut(s) 1995
BseNI ACTGG 1 cut(s) 270
BseRI GAGGAG 5 cut(s) 50, 426, 640, 862, 881
BseSI GKGCMC 1 cut(s) 349
BseXI GCAGC 3 cut(s) 31, 176, 286
BseYI CCCAGC 2 cut(s) 787, 1520
BsgI GTGCAG 1 cut(s) 509
Bsh1285I CGRYCG 1 cut(s) 1607
BshNI GGYRCC 2 cut(s) 968, 1969
BshVI ATCGAT 1 cut(s) 618
BsiEI CGRYCG 1 cut(s) 1607
BsiHKAI GWGCWC 1 cut(s) 349
BslFI GGGAC 4 cut(s) 386, 1237, 1334, 1537
BslI CCNNNNNNNGG 3 cut(s) 376, 1361, 1643
BsmAI GTCTC 2 cut(s) 258, 876
BsmFI GGGAC 4 cut(s) 386, 1237, 1334, 1537
BsmI GAATGC 1 cut(s) 763
Bsp1286I GDGCHC 1 cut(s) 349
Bsp1407I TGTACA 1 cut(s) 858
Bsp143I GATC 8 cut(s) 307, 501, 591, 928, 1286, 1534, 1604, 1758
Bsp19I CCATGG 1 cut(s) 972
BspACI CCGC 2 cut(s) 116, 377
BspCNI CTCAG 1 cut(s) 1996
BspDI ATCGAT 1 cut(s) 618
BspHI TCATGA 1 cut(s) 565
BspLI GGNNCC 5 cut(s) 821, 970, 1016, 1309, 1971
BspMI ACCTGC 1 cut(s) 481
BspPI GGATC 1 cut(s) 509
BspQI GCTCTTC 1 cut(s) 669
BspT107I GGYRCC 2 cut(s) 968, 1969
BspTI CTTAAG 1 cut(s) 1693
BsrGI TGTACA 1 cut(s) 858
BsrI ACTGG 1 cut(s) 270
BssECI CCNNGG 3 cut(s) 61, 743, 972
BssMI GATC 8 cut(s) 307, 501, 591, 928, 1286, 1534, 1604, 1758
BssT1I CCWWGG 1 cut(s) 972
Bst2UI CCWGG 2 cut(s) 940, 1104
Bst4CI ACNGT 6 cut(s) 124, 487, 709, 1251, 1627, 1828
Bst6I CTCTTC 3 cut(s) 123, 669, 1116
BstAFI CTTAAG 1 cut(s) 1693
BstAPI GCANNNNNTGC 1 cut(s) 1004
BstAUI TGTACA 1 cut(s) 858
BstC8I GCNNGC 3 cut(s) 288, 1937, 2126
BstDEI CTNAG 2 cut(s) 1098, 2004
BstDSI CCRYGG 1 cut(s) 972
BstF5I GGATG 3 cut(s) 484, 1507, 1725
BstKTI GATC 8 cut(s) 310, 504, 594, 931, 1289, 1537, 1607, 1761
BstMAI GTCTC 2 cut(s) 258, 876
BstMBI GATC 8 cut(s) 307, 501, 591, 928, 1286, 1534, 1604, 1758
BstMCI CGRYCG 1 cut(s) 1607
BstMWI GCNNNNNNNGC 3 cut(s) 296, 995, 1004
BstNI CCWGG 2 cut(s) 940, 1104
BstNSI RCATGY 4 cut(s) 290, 1385, 1684, 2092
BstSCI CCNGG 2 cut(s) 938, 1102
BstSLI GKGCMC 1 cut(s) 349
BstV1I GCAGC 3 cut(s) 31, 176, 286
BstV2I GAAGAC 1 cut(s) 1978
BstX2I RGATCY 1 cut(s) 928
BstYI RGATCY 1 cut(s) 928
Bsu15I ATCGAT 1 cut(s) 618
BsuI GTATCC 1 cut(s) 1179
BsuTUI ATCGAT 1 cut(s) 618
BtgI CCRYGG 1 cut(s) 972
BtsCI GGATG 3 cut(s) 484, 1507, 1725
BtsI GCAGTG 2 cut(s) 504, 1800
BtsIMutI CAGTG 3 cut(s) 277, 504, 1800
BveI ACCTGC 1 cut(s) 481
Cac8I GCNNGC 3 cut(s) 288, 1937, 2126
CciI TCATGA 1 cut(s) 565
Cfr13I GGNCC 2 cut(s) 1015, 2080
ClaI ATCGAT 1 cut(s) 618
Csp6I GTAC 7 cut(s) 251, 859, 884, 969, 1475, 1628, 1970
CspCI CAANNNNNGTGG 2 cut(s) 1924, 1959
CviQI GTAC 7 cut(s) 251, 859, 884, 969, 1475, 1628, 1970
DdeI CTNAG 2 cut(s) 1098, 2004
DpnI GATC 8 cut(s) 309, 503, 593, 930, 1288, 1536, 1606, 1760
DpnII GATC 8 cut(s) 307, 501, 591, 928, 1286, 1534, 1604, 1758
DraI TTTAAA 1 cut(s) 1080
Eam1104I CTCTTC 3 cut(s) 123, 669, 1116
EarI CTCTTC 3 cut(s) 123, 669, 1116
Eco130I CCWWGG 1 cut(s) 972
Eco47I GGWCC 2 cut(s) 1015, 2080
Eco57I CTGAAG 1 cut(s) 1541
EcoO109I RGGNCCY 1 cut(s) 1015
EcoRII CCWGG 2 cut(s) 938, 1102
EcoT14I CCWWGG 1 cut(s) 972
ErhI CCWWGG 1 cut(s) 972
FaqI GGGAC 4 cut(s) 386, 1237, 1334, 1537
FauNDI CATATG 4 cut(s) 527, 876, 1000, 1909
FbaI TGATCA 1 cut(s) 591
FblI GTMKAC 1 cut(s) 2033
Fnu4HI GCNGC 3 cut(s) 20, 190, 300
FokI GGATG 3 cut(s) 491, 1514, 1732
Fsp4HI GCNGC 3 cut(s) 20, 190, 300
FspBI CTAG 7 cut(s) 426, 431, 770, 840, 887, 1019, 1794
GluI GCNGC 3 cut(s) 20, 190, 300
GsaI CCCAGC 2 cut(s) 791, 1524
GsuI CTGGAG 2 cut(s) 253, 909
HincII GTYRAC 1 cut(s) 1963
HindII GTYRAC 1 cut(s) 1963
HinfI GANTC 7 cut(s) 148, 266, 869, 1091, 1244, 1549, 2030
HphI GGTGA 2 cut(s) 77, 1169
Hpy166II GTNNAC 5 cut(s) 347, 1543, 1963, 2034, 2083
Hpy188I TCNGA 3 cut(s) 211, 1560, 2005
Hpy188III TCNNGA 8 cut(s) 152, 305, 566, 840, 926, 1118, 1637, 1926
Hpy8I GTNNAC 5 cut(s) 347, 1543, 1963, 2034, 2083
Hpy99I CGWCG 1 cut(s) 202
HpyAV CCTTC 5 cut(s) 164, 466, 554, 610, 2114
HpyCH4III ACNGT 6 cut(s) 124, 487, 709, 1251, 1627, 1828
HpyF10VI GCNNNNNNNGC 3 cut(s) 296, 995, 1004
HpyF3I CTNAG 2 cut(s) 1098, 2004
KpnI GGTACC 2 cut(s) 972, 1973
Ksp22I TGATCA 1 cut(s) 591
Kzo9I GATC 8 cut(s) 307, 501, 591, 928, 1286, 1534, 1604, 1758
LguI GCTCTTC 1 cut(s) 669
LmnI GCTCC 2 cut(s) 439, 819
Lsp1109I GCAGC 3 cut(s) 31, 176, 286
LweI GCATC 4 cut(s) 976, 994, 1492, 1906
MaeI CTAG 7 cut(s) 426, 431, 770, 840, 887, 1019, 1794
MaeIII GTNAC 9 cut(s) 46, 65, 83, 469, 493, 572, 1038, 1125, 1796
MalI GATC 8 cut(s) 309, 503, 593, 930, 1288, 1536, 1606, 1760
MboI GATC 8 cut(s) 307, 501, 591, 928, 1286, 1534, 1604, 1758
MfeI CAATTG 2 cut(s) 1841, 2075
MflI RGATCY 1 cut(s) 928
MhlI GDGCHC 1 cut(s) 349
MlyI GAGTC 3 cut(s) 260, 878, 2039
MmeI TCCRAC 2 cut(s) 833, 1558
MroXI GAANNNNTTC 2 cut(s) 132, 678
MslI CAYNNNNRTG 6 cut(s) 141, 245, 285, 326, 570, 1944
MspA1I CMGCKG 1 cut(s) 299
MspCI CTTAAG 1 cut(s) 1693
MspR9I CCNGG 2 cut(s) 940, 1104
MunI CAATTG 2 cut(s) 1841, 2075
Mva1269I GAATGC 1 cut(s) 763
MvaI CCWGG 2 cut(s) 940, 1104
MwoI GCNNNNNNNGC 3 cut(s) 296, 995, 1004
NcoI CCATGG 1 cut(s) 972
NdeI CATATG 4 cut(s) 527, 876, 1000, 1909
NdeII GATC 8 cut(s) 307, 501, 591, 928, 1286, 1534, 1604, 1758
NlaIV GGNNCC 5 cut(s) 821, 970, 1016, 1309, 1971
NmeAIII GCCGAG 1 cut(s) 724
NmuCI GTSAC 5 cut(s) 46, 65, 469, 572, 1038
NspI RCATGY 4 cut(s) 290, 1385, 1684, 2092
OliI CACNNNNGTG 1 cut(s) 245
PaeI GCATGC 1 cut(s) 290
PagI TCATGA 1 cut(s) 565
PciI ACATGT 2 cut(s) 1680, 2088
PciSI GCTCTTC 1 cut(s) 669
PctI GAATGC 1 cut(s) 763
PdmI GAANNNNTTC 2 cut(s) 132, 678
PfeI GAWTC 4 cut(s) 148, 1091, 1244, 1549
PkrI GCNGC 3 cut(s) 21, 191, 301
Ple19I CGATCG 1 cut(s) 1607
PleI GAGTC 3 cut(s) 260, 877, 2038
PpsI GAGTC 3 cut(s) 260, 877, 2038
PpuMI RGGWCCY 1 cut(s) 1015
PscI ACATGT 2 cut(s) 1680, 2088
Psp5II RGGWCCY 1 cut(s) 1015
Psp6I CCWGG 2 cut(s) 938, 1102
PspFI CCCAGC 2 cut(s) 787, 1520
PspGI CCWGG 2 cut(s) 938, 1102
PspN4I GGNNCC 5 cut(s) 821, 970, 1016, 1309, 1971
PspPI GGNCC 2 cut(s) 1015, 2080
PspPPI RGGWCCY 1 cut(s) 1015
PsuI RGATCY 1 cut(s) 928
PvuI CGATCG 1 cut(s) 1607
PvuII CAGCTG 1 cut(s) 299
RsaI GTAC 7 cut(s) 252, 860, 885, 970, 1476, 1629, 1971
RsaNI GTAC 7 cut(s) 251, 859, 884, 969, 1475, 1628, 1970
RseI CAYNNNNRTG 6 cut(s) 141, 245, 285, 326, 570, 1944
SapI GCTCTTC 1 cut(s) 669
SatI GCNGC 3 cut(s) 20, 190, 300
Sau3AI GATC 8 cut(s) 307, 501, 591, 928, 1286, 1534, 1604, 1758
Sau96I GGNCC 2 cut(s) 1015, 2080
ScaI AGTACT 1 cut(s) 885
SchI GAGTC 3 cut(s) 260, 878, 2039
ScrFI CCNGG 2 cut(s) 940, 1104
SduI GDGCHC 1 cut(s) 349
SfaNI GCATC 4 cut(s) 976, 994, 1492, 1906
SinI GGWCC 2 cut(s) 1015, 2080
SmiMI CAYNNNNRTG 6 cut(s) 141, 245, 285, 326, 570, 1944
SmlI CTYRAG 2 cut(s) 1199, 1693
SmoI CTYRAG 2 cut(s) 1199, 1693
SphI GCATGC 1 cut(s) 290
SsiI CCGC 2 cut(s) 116, 377
SspMI CTAG 7 cut(s) 426, 431, 770, 840, 887, 1019, 1794
StyD4I CCNGG 2 cut(s) 938, 1102
StyI CCWWGG 1 cut(s) 972
TaaI ACNGT 6 cut(s) 124, 487, 709, 1251, 1627, 1828
TaqI TCGA 3 cut(s) 197, 618, 1368
TatI WGTACW 3 cut(s) 858, 883, 1474
TfiI GAWTC 4 cut(s) 148, 1091, 1244, 1549
TscAI CASTG 3 cut(s) 277, 511, 1807
TseFI GTSAC 5 cut(s) 46, 65, 469, 572, 1038
TseI GCWGC 3 cut(s) 19, 189, 299
Tsp45I GTSAC 5 cut(s) 46, 65, 469, 572, 1038
TspDTI ATGAA 7 cut(s) 125, 495, 582, 770, 1245, 1541, 1683
TspRI CASTG 3 cut(s) 277, 511, 1807
Vha464I CTTAAG 1 cut(s) 1693
VneI GTGCAC 1 cut(s) 345
VpaK11BI GGWCC 2 cut(s) 1015, 2080
XapI RAATTY 6 cut(s) 730, 1050, 1161, 1211, 1270, 1870
XbaI TCTAGA 1 cut(s) 839
XceI RCATGY 4 cut(s) 290, 1385, 1684, 2092
XmiI GTMKAC 1 cut(s) 2033
XmnI GAANNNNTTC 2 cut(s) 132, 678
XspI CTAG 7 cut(s) 426, 431, 770, 840, 887, 1019, 1794
ZrmI AGTACT 1 cut(s) 885
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.