FvH4_7g07820

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000294
Physical Location & Seq
Forward (+)
7718938 .. 7722010
3073 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g07820.t1

Sequence Viewer

Length: 1902 bp
ATGGCTCAAATATTTGGAATTTCACTCTGCATATTATTTTGCTTCCCGGTTCTCTTGTGTTCTGAAGTTGATAAAAAAGAGCATTACAACAGTCCTAGTGTTGTGGACAAGGTTGACGTTGGTGTGATTCTTGAAATGGGATCAAGGGAAGCAAAACTTCTTCTCAGCTGCATTTCAATGGCACTGTCTGATTTCTACAATCTGCACAACGACTACAGCACAAGAGTTGTTCTCCACAGTAGCGATTCACATGGAAAAGCTCTACATTCTCTATCAGCTGCTCTTAGTCTGTTGGATAACATCAAAGTGGAAGCAATAATTAGTGCAGAACCAAGAATGCAAGCAGACCTATTGGAAGAATTGGGAGTTGAAGTCCCAGTATTGTCTCTGTCTCAACCTATTCTATCTCCTCCTCTGACTCATAGATATCCCTTCTTCATTGAGATCACACAGGATGAAACTTCTCAGGTTATGGGAATTGCTTCCCTTATTGAAATGTACAAATGGAAGGATGTTATCATTTTATATGAGAGCACAAAATATGCATGCAACATCATTTCATCTTTTACTAGTTCCTTTCAGGAGAAAAATATCTATGTTTCCTATAAGAGTTCCATATCTGCCTCGTCAACAAATCAACAAATCCTTGAGGAGCTCCAGAAGCTCATGACATTGAAGACTAGGGTAATTGTGGTGCATATGTCCCATGTGCTCATGCCTCGATTATTCTTAAATGCAAAAAAGTTAGGAATGATGAGAGAATGGTATGCCTGGATTACGACATCAGCTGGTATGAATTTCTTGCAATCGATGGATATATCTGTCATTGATTCTATGCAAGGAGTGGTGGGTTTCAAGTCTTATATTCCAGCTTCAACCAACCTCAACAAATTTACTTCCAGAATCAGGAGAAAGTTTTACAGTGAGGAGCCTGATATGGAACTAGTTAGGGAGTTGAGTGCAGATGGAATCTGGGCATATGATGCAACTTGGGCTCTAGCAGATGCAGTTGAGAGGACAAGAATCAAAAGTTCTACTACTGGATCCTCCAAGCATGGAGTTGTGCTTCTTGGAGAGATTTTGCAAACTAGATTGAAAGGTTTAAGTGGTGAAGTTCGATATCCAAATGGGAACTTGGAATCAAGTGGATTTGAGATAGTGAACATAATGGGAAGTGGGATGAGAAGAGTTGGATTTTGGCCCGATGAACAAGGAAAAATCACACAAGAGTCACCTCCACTCAGTAACAAGAGAAATGCACTTCCAACTAACCATCTGGAAACAATCATATGGCCGGGAGGATCATCAACCATCATGAAACATTCCAAGAGGCGACTGAGTGGAATTAAACTAAGAGTTGGGGTTCCAGTAAAAAAAGGGTTCAAGGAACTTGTGCGTGTGGAGCATGATGAACAAACCAATAGAACTCATGTCACGGGATTTTGTATAGACGTATTCGAAACTGCAATTAGAGGATTGCCATATAAAGTACATTATGAGTTTATTCCATTCGTTAATGCCAATGGACAGTCAGCTGGGAGTTACAATGATCTTGTTTACAACGTTTATCTAAAGACATATGATGCTGTTGCTGGAGATACGACGATCACATCAAATAGGTCTTTGTATGTTGATTTTACAGTACCATTTACTGACGTGGGGTTGGGAATATTAGTACCAAATGAAAAGGAAAACATGTGGGTTTTCCTGGAACCTCTGTCAGGAAATCTTTGGATAGCAACTGCTGGTTTTTTTATCCTCACGGGTTTCGTTGTGTGGTTAATTGAGCGTCCTGTGAACCAAGAATTCCAGGGATCAACATCACAGCAACTTGGAACAATATTCTGGTTCTCCTTTTCAACCCTTGTGTTTTCTCATAGTAAGTGCTCTAGCTCTATTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan Lig_chan-Glu_bd SBP_bac_3

Protein Analysis

634

Amino Acids

70.97

Weight (kDa)

6.45

Isoelectric Point (pI)

41.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 56 - 390 2e-59 Receptor family ligand binding region
Peripla_BP_6 PF13458 74 - 344 7.1e-07 Periplasmic binding protein
Lig_chan-Glu_bd PF10613 469 - 561 1.4e-09 Ligated ion channel L-glutamate- and glycine-binding site
Lig_chan PF00060 576 - 625 5.1e-09 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclI AACGTT 1 cut(s) 1563
AclWI GGATC 5 cut(s) 148, 1038, 1051, 1309, 1822
AcoI YGGCCR 1 cut(s) 1292
AcsI RAATTY 4 cut(s) 18, 796, 890, 1805
AcuI CTGAAG 1 cut(s) 84
AfaI GTAC 4 cut(s) 500, 1491, 1644, 1677
AfiI CCNNNNNNNGG 2 cut(s) 906, 1721
AflIII ACRYGT 1 cut(s) 1695
AhlI ACTAGT 2 cut(s) 569, 943
AjiI CACGTC 1 cut(s) 1657
AjnI CCWGG 3 cut(s) 770, 1707, 1809
AluBI AGCT 9 cut(s) 168, 260, 278, 655, 664, 788, 872, 1535, 1893
AluI AGCT 9 cut(s) 168, 260, 278, 655, 664, 788, 872, 1535, 1893
Alw21I GWGCWC 4 cut(s) 536, 657, 714, 1889
Alw26I GTCTC 2 cut(s) 390, 396
AlwI GGATC 5 cut(s) 148, 1038, 1051, 1309, 1822
AoxI GGCC 2 cut(s) 1199, 1292
ApeKI GCWGC 2 cut(s) 168, 278
ApoI RAATTY 4 cut(s) 18, 796, 890, 1805
Asp700I GAANNNNTTC 1 cut(s) 481
AspS9I GGNCC 1 cut(s) 1200
AsuC2I CCSGG 2 cut(s) 47, 1296
AsuHPI GGTGA 2 cut(s) 1121, 1224
AsuII TTCGAA 1 cut(s) 1458
BamHI GGATCC 1 cut(s) 1043
BanII GRGCYC 2 cut(s) 657, 997
BbsI GAAGAC 1 cut(s) 683
Bbv12I GWGCWC 4 cut(s) 536, 657, 714, 1889
BbvI GCAGC 2 cut(s) 155, 265
BccI CCATC 4 cut(s) 805, 959, 1281, 1319
BciT130I CCWGG 3 cut(s) 772, 1709, 1811
BcnI CCSGG 2 cut(s) 47, 1296
BcoDI GTCTC 2 cut(s) 390, 396
BcuI ACTAGT 2 cut(s) 569, 943
BfaI CTAG 7 cut(s) 96, 570, 681, 944, 998, 1089, 1890
BfmI CTRYAG 1 cut(s) 214
BisI GCNGC 2 cut(s) 169, 279
BlsI GCNGC 2 cut(s) 170, 280
Bme1390I CCNGG 5 cut(s) 47, 772, 1296, 1709, 1811
BmgBI CACGTC 1 cut(s) 1657
BmgT120I GGNCC 1 cut(s) 1200
BmiI GGNNCC 4 cut(s) 930, 1045, 1365, 1713
BmrFI CCNGG 5 cut(s) 47, 772, 1296, 1709, 1811
BmrI ACTGGG 1 cut(s) 371
BmsI GCATC 3 cut(s) 973, 994, 1573
BmuI ACTGGG 1 cut(s) 371
BpiI GAAGAC 1 cut(s) 683
BplI GAGNNNNNCTC 2 cut(s) 216, 248
BpmI CTGGAG 2 cut(s) 641, 1614
Bpu14I TTCGAA 1 cut(s) 1458
BpuEI CTTGAG 1 cut(s) 668
BpuMI CCSGG 2 cut(s) 47, 1296
Bsa29I ATCGAT 1 cut(s) 809
BsaBI GATNNNNATC 1 cut(s) 1819
BsaJI CCNNGG 1 cut(s) 1810
BsaXI ACNNNNNCTCC 2 cut(s) 357, 387
Bsc4I CCNNNNNNNGG 2 cut(s) 906, 1721
Bse1I ACTGG 3 cut(s) 377, 1045, 1367
Bse8I GATNNNNATC 1 cut(s) 1819
BseBI CCWGG 3 cut(s) 772, 1709, 1811
BseCI ATCGAT 1 cut(s) 809
BseDI CCNNGG 1 cut(s) 1810
BseGI GGATG 3 cut(s) 460, 517, 1185
BseJI GATNNNNATC 1 cut(s) 1819
BseLI CCNNNNNNNGG 2 cut(s) 906, 1721
BseMII CTCAG 4 cut(s) 178, 479, 1255, 1328
BseNI ACTGG 3 cut(s) 377, 1045, 1367
BseRI GAGGAG 4 cut(s) 399, 402, 665, 941
BseXI GCAGC 2 cut(s) 155, 265
BseYI CCCAGC 1 cut(s) 1535
BsgI GTGCAG 3 cut(s) 188, 345, 981
BshFI GGCC 2 cut(s) 1201, 1294
BshVI ATCGAT 1 cut(s) 809
BsiHKAI GWGCWC 4 cut(s) 536, 657, 714, 1889
BsiSI CCGG 2 cut(s) 47, 1295
BslFI GGGAC 2 cut(s) 359, 688
BslI CCNNNNNNNGG 2 cut(s) 906, 1721
BsmAI GTCTC 2 cut(s) 390, 396
BsmFI GGGAC 2 cut(s) 359, 688
BsmI GAATGC 1 cut(s) 342
BsnI GGCC 2 cut(s) 1201, 1294
Bsp119I TTCGAA 1 cut(s) 1458
Bsp1286I GDGCHC 5 cut(s) 536, 657, 714, 997, 1889
Bsp1407I TGTACA 1 cut(s) 498
Bsp143I GATC 7 cut(s) 140, 444, 1043, 1301, 1549, 1605, 1814
BspANI GGCC 2 cut(s) 1201, 1294
BspCNI CTCAG 4 cut(s) 177, 478, 1254, 1329
BspDI ATCGAT 1 cut(s) 809
BspHI TCATGA 2 cut(s) 666, 1314
BspLI GGNNCC 4 cut(s) 930, 1045, 1365, 1713
BspPI GGATC 5 cut(s) 148, 1038, 1051, 1309, 1822
BspT104I TTCGAA 1 cut(s) 1458
BsrGI TGTACA 1 cut(s) 498
BsrI ACTGG 3 cut(s) 377, 1045, 1367
BssECI CCNNGG 1 cut(s) 1810
BssMI GATC 7 cut(s) 140, 444, 1043, 1301, 1549, 1605, 1814
Bst2UI CCWGG 3 cut(s) 772, 1709, 1811
Bst4CI ACNGT 6 cut(s) 92, 186, 239, 923, 1530, 1642
Bst6I CTCTTC 1 cut(s) 1180
BstAPI GCANNNNNTGC 1 cut(s) 983
BstAUI TGTACA 1 cut(s) 498
BstBI TTCGAA 1 cut(s) 1458
BstC8I GCNNGC 2 cut(s) 342, 547
BstDEI CTNAG 6 cut(s) 164, 284, 465, 1241, 1337, 1352
BstENI CCTNNNNNAGG 1 cut(s) 1719
BstF5I GGATG 3 cut(s) 460, 517, 1185
BstKTI GATC 7 cut(s) 143, 447, 1046, 1304, 1552, 1608, 1817
BstMAI GTCTC 2 cut(s) 390, 396
BstMBI GATC 7 cut(s) 140, 444, 1043, 1301, 1549, 1605, 1814
BstMWI GCNNNNNNNGC 4 cut(s) 661, 983, 992, 1402
BstNI CCWGG 3 cut(s) 772, 1709, 1811
BstNSI RCATGY 2 cut(s) 549, 1699
BstSCI CCNGG 5 cut(s) 45, 770, 1294, 1707, 1809
BstSFI CTRYAG 1 cut(s) 214
BstV1I GCAGC 2 cut(s) 155, 265
BstV2I GAAGAC 1 cut(s) 683
BstX2I RGATCY 1 cut(s) 1043
BstYI RGATCY 1 cut(s) 1043
Bsu15I ATCGAT 1 cut(s) 809
BsuRI GGCC 2 cut(s) 1201, 1294
BsuTUI ATCGAT 1 cut(s) 809
BtrI CACGTC 1 cut(s) 1657
BtsCI GGATG 3 cut(s) 460, 517, 1185
BtsIMutI CAGTG 2 cut(s) 182, 928
Cac8I GCNNGC 2 cut(s) 342, 547
CciI TCATGA 2 cut(s) 666, 1314
Cfr13I GGNCC 1 cut(s) 1200
ClaI ATCGAT 1 cut(s) 809
CseI GACGC 1 cut(s) 1778
Csp6I GTAC 4 cut(s) 499, 1490, 1643, 1676
CviQI GTAC 4 cut(s) 499, 1490, 1643, 1676
DdeI CTNAG 6 cut(s) 164, 284, 465, 1241, 1337, 1352
DpnI GATC 7 cut(s) 142, 446, 1045, 1303, 1551, 1607, 1816
DpnII GATC 7 cut(s) 140, 444, 1043, 1301, 1549, 1605, 1814
EaeI YGGCCR 1 cut(s) 1292
Eam1104I CTCTTC 1 cut(s) 1180
EarI CTCTTC 1 cut(s) 1180
Ecl136II GAGCTC 1 cut(s) 655
Eco24I GRGCYC 2 cut(s) 657, 997
Eco32I GATATC 2 cut(s) 428, 1121
Eco53kI GAGCTC 1 cut(s) 655
Eco57I CTGAAG 1 cut(s) 84
EcoICRI GAGCTC 1 cut(s) 655
EcoNI CCTNNNNNAGG 1 cut(s) 1719
EcoRI GAATTC 1 cut(s) 1805
EcoRII CCWGG 3 cut(s) 770, 1707, 1809
EcoRV GATATC 2 cut(s) 428, 1121
EcoT22I ATGCAT 1 cut(s) 547
EcoT38I GRGCYC 2 cut(s) 657, 997
FalI AAGNNNNNCTT 2 cut(s) 141, 173
FaqI GGGAC 2 cut(s) 359, 688
FauNDI CATATG 4 cut(s) 699, 979, 1289, 1579
Fnu4HI GCNGC 2 cut(s) 169, 279
FokI GGATG 3 cut(s) 467, 524, 1192
FriOI GRGCYC 2 cut(s) 657, 997
Fsp4HI GCNGC 2 cut(s) 169, 279
FspBI CTAG 7 cut(s) 96, 570, 681, 944, 998, 1089, 1890
GluI GCNGC 2 cut(s) 169, 279
GsaI CCCAGC 1 cut(s) 1539
GsuI CTGGAG 2 cut(s) 641, 1614
HaeIII GGCC 2 cut(s) 1201, 1294
HapII CCGG 2 cut(s) 47, 1295
HgaI GACGC 1 cut(s) 1778
HincII GTYRAC 2 cut(s) 115, 630
HindII GTYRAC 2 cut(s) 115, 630
HinfI GANTC 9 cut(s) 127, 245, 418, 830, 903, 969, 1023, 1139, 1229
HpaII CCGG 2 cut(s) 47, 1295
HphI GGTGA 2 cut(s) 1121, 1224
Hpy166II GTNNAC 6 cut(s) 106, 115, 630, 1162, 1558, 1798
Hpy188I TCNGA 3 cut(s) 64, 190, 417
Hpy188III TCNNGA 9 cut(s) 131, 581, 658, 667, 900, 907, 1277, 1315, 1722
Hpy8I GTNNAC 6 cut(s) 106, 115, 630, 1162, 1558, 1798
Hpy99I CGWCG 1 cut(s) 1606
HpyAV CCTTC 2 cut(s) 442, 502
HpyCH4III ACNGT 6 cut(s) 92, 186, 239, 923, 1530, 1642
HpyCH4IV ACGT 4 cut(s) 117, 1452, 1563, 1656
HpyF10VI GCNNNNNNNGC 4 cut(s) 661, 983, 992, 1402
HpyF3I CTNAG 6 cut(s) 164, 284, 465, 1241, 1337, 1352
HpySE526I ACGT 4 cut(s) 117, 1452, 1563, 1656
Kzo9I GATC 7 cut(s) 140, 444, 1043, 1301, 1549, 1605, 1814
LmnI GCTCC 4 cut(s) 652, 660, 928, 1402
Lsp1109I GCAGC 2 cut(s) 155, 265
LweI GCATC 3 cut(s) 973, 994, 1573
MaeI CTAG 7 cut(s) 96, 570, 681, 944, 998, 1089, 1890
MaeII ACGT 4 cut(s) 117, 1452, 1563, 1656
MaeIII GTNAC 4 cut(s) 1230, 1244, 1432, 1541
MalI GATC 7 cut(s) 142, 446, 1045, 1303, 1551, 1607, 1816
MboI GATC 7 cut(s) 140, 444, 1043, 1301, 1549, 1605, 1814
MboII GAAGA 5 cut(s) 152, 368, 427, 688, 1197
MflI RGATCY 1 cut(s) 1043
MhlI GDGCHC 5 cut(s) 536, 657, 714, 997, 1889
MlyI GAGTC 2 cut(s) 412, 1238
MmeI TCCRAC 3 cut(s) 273, 1171, 1289
Mph1103I ATGCAT 1 cut(s) 547
MroXI GAANNNNTTC 1 cut(s) 481
MseI TTAA 5 cut(s) 731, 1103, 1347, 1515, 1781
MslI CAYNNNNRTG 2 cut(s) 176, 305
MspA1I CMGCKG 4 cut(s) 168, 278, 788, 1535
MspI CCGG 2 cut(s) 47, 1295
MspR9I CCNGG 5 cut(s) 47, 772, 1296, 1709, 1811
Mva1269I GAATGC 1 cut(s) 342
MvaI CCWGG 3 cut(s) 772, 1709, 1811
MwoI GCNNNNNNNGC 4 cut(s) 661, 983, 992, 1402
NciI CCSGG 2 cut(s) 47, 1296
NdeI CATATG 4 cut(s) 699, 979, 1289, 1579
NdeII GATC 7 cut(s) 140, 444, 1043, 1301, 1549, 1605, 1814
NlaIV GGNNCC 4 cut(s) 930, 1045, 1365, 1713
NmuCI GTSAC 2 cut(s) 1230, 1432
NsiI ATGCAT 1 cut(s) 547
NspI RCATGY 2 cut(s) 549, 1699
NspV TTCGAA 1 cut(s) 1458
PaeI GCATGC 1 cut(s) 549
PagI TCATGA 2 cut(s) 666, 1314
PciI ACATGT 1 cut(s) 1695
PctI GAATGC 1 cut(s) 342
PdmI GAANNNNTTC 1 cut(s) 481
PfeI GAWTC 7 cut(s) 127, 245, 830, 903, 969, 1023, 1139
PfoI TCCNGGA 1 cut(s) 1707
PkrI GCNGC 2 cut(s) 170, 280
PleI GAGTC 2 cut(s) 412, 1237
PpsI GAGTC 2 cut(s) 412, 1237
PscI ACATGT 1 cut(s) 1695
Psp124BI GAGCTC 1 cut(s) 657
Psp1406I AACGTT 1 cut(s) 1563
Psp6I CCWGG 3 cut(s) 770, 1707, 1809
PspFI CCCAGC 1 cut(s) 1535
PspGI CCWGG 3 cut(s) 770, 1707, 1809
PspN4I GGNNCC 4 cut(s) 930, 1045, 1365, 1713
PspPI GGNCC 1 cut(s) 1200
PsuI RGATCY 1 cut(s) 1043
PvuII CAGCTG 4 cut(s) 168, 278, 788, 1535
RsaI GTAC 4 cut(s) 500, 1491, 1644, 1677
RsaNI GTAC 4 cut(s) 499, 1490, 1643, 1676
RseI CAYNNNNRTG 2 cut(s) 176, 305
SacI GAGCTC 1 cut(s) 657
SaqAI TTAA 5 cut(s) 731, 1103, 1347, 1515, 1781
SatI GCNGC 2 cut(s) 169, 279
Sau3AI GATC 7 cut(s) 140, 444, 1043, 1301, 1549, 1605, 1814
Sau96I GGNCC 1 cut(s) 1200
SchI GAGTC 2 cut(s) 412, 1238
ScrFI CCNGG 5 cut(s) 47, 772, 1296, 1709, 1811
SduI GDGCHC 5 cut(s) 536, 657, 714, 997, 1889
SfaNI GCATC 3 cut(s) 973, 994, 1573
SfcI CTRYAG 1 cut(s) 214
SfuI TTCGAA 1 cut(s) 1458
SmiMI CAYNNNNRTG 2 cut(s) 176, 305
SmlI CTYRAG 1 cut(s) 647
SmoI CTYRAG 1 cut(s) 647
SpeI ACTAGT 2 cut(s) 569, 943
SphI GCATGC 1 cut(s) 549
SspI AATATT 3 cut(s) 12, 1671, 1842
SspMI CTAG 7 cut(s) 96, 570, 681, 944, 998, 1089, 1890
SstI GAGCTC 1 cut(s) 657
StyD4I CCNGG 5 cut(s) 45, 770, 1294, 1707, 1809
TaaI ACNGT 6 cut(s) 92, 186, 239, 923, 1530, 1642
TaiI ACGT 4 cut(s) 120, 1455, 1566, 1659
TaqI TCGA 4 cut(s) 721, 809, 1117, 1458
TatI WGTACW 2 cut(s) 498, 1489
TfiI GAWTC 7 cut(s) 127, 245, 830, 903, 969, 1023, 1139
Tru1I TTAA 5 cut(s) 731, 1103, 1347, 1515, 1781
Tru9I TTAA 5 cut(s) 731, 1103, 1347, 1515, 1781
TscAI CASTG 2 cut(s) 189, 928
TseFI GTSAC 2 cut(s) 1230, 1432
TseI GCWGC 2 cut(s) 168, 278
Tsp45I GTSAC 2 cut(s) 1230, 1432
TspDTI ATGAA 8 cut(s) 427, 471, 549, 809, 1221, 1331, 1425, 1698
TspRI CASTG 2 cut(s) 189, 928
XagI CCTNNNNNAGG 1 cut(s) 1719
XapI RAATTY 4 cut(s) 18, 796, 890, 1805
XceI RCATGY 2 cut(s) 549, 1699
XmnI GAANNNNTTC 1 cut(s) 481
XspI CTAG 7 cut(s) 96, 570, 681, 944, 998, 1089, 1890
Zsp2I ATGCAT 1 cut(s) 547
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.