Rmu_sc0002161.1_g000003

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002161.1
OG0000294
Physical Location & Seq
Reverse (-)
13696 .. 21131
7436 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002161.1_g000003.1.cds

Sequence Viewer

Length: 3276 bp
atggagtttcaagggttgaggcaaacagtgatcctggcctttgtgaccttctgttgcctcattggtcagctgtgtgctgatattgaaaaaacaaataatgttattaatcctattgttgttgaagatcacgttcacgtcggtgttattctcgatatgggatcaagagaaggaaagattattctcagctgcatatcaatggccctctctgatttttatcatctgcatgataactacagcacaaaagtagttctccacagtaaggattccaaaggtgaacgtctgcctgctctgtcagctgcccttggtcttttggaaaacatcagagtggaatcaataattggtgcacaaacaagagcggaagcaaaccttttggcagaattaggagaagcggccaaactgcctgtaatgtctctttctcgtcctctgactgacaataaatatcctttccttgttgagattatgcgcagtgatcaagctgctgaagttaggggaatcagtgcgcttattgaagtattcaaatggagggacgttataattttatatgataacaaagaatatgagaaagacttcattccatcattatccaactctttccaagagatcacacatcggagtgtttcatacaagagttccaatattgcttcctcctcatcaaatgaagaaatcattgaagaactccaaaagctgacgagattgaagattaataaggtatttgtggtgcatgtgtcacatttgcttgcaccacgccttttcttaattgcaaataagttagggatgatgagtgaagggtatgcttggattgtgacttcgagtagcatgaatttattgcaagccatgaatttatctgttatcgagtcaatgcaaggagtgctgggtttcaagtcgtctattccagcatcaataaaccttcacagtcttacaacaagattgaggaggaagttttacatggaggatccaaatatggaagtgattcgggagttgagtgcagatgggatctgggcatatgatgcaacttgggctctagcagaagcagttgaaagagcaaggcttaaaaattctactagatcctccaaagatggagctgtgcttcttaatgagatgttgcagactagatttaaaggtttaagtggtgaaattcaatatgtgaatgggaaactgattccatcagaaccatttgagatagttaatgttattggaaaaggtgagatcaaaaggattggattttggccttgcaaagaagaagtaaaatccggaaaagggtcatcctatcagcagcttattcatagtaggagaaatttagcttctacaattgatcttgaaagagtcatctggcctggaggatccaaaagggaattgagtagtagtgaaacaattaaactaagaattggtgttccagtgagattcgggttcaaggaacttgttcgtgtcgagcatgatcttgaaaccaacacaactcatgtcactggcttttctatagatgtatttaaagctgcaattggagctttgccgtatgaagtgcaatacgagtttattccatttgaggatgccaatggaaattctgcagggacttataatgatcttgtttaccaggtttatctcaagaaattcgatgctgttgttggagatgttactatcacagagaacagatctcagtatgttgattttacaatcccatatactgacttaggtgtgggaatgttggtaccaaatgccaaggaaaacatgtggattttctttaaaccactttcaaaatatctttggataacaactgctgctttctttatccttactggatttgttgtctggataattgagcatcctactaatgaaaacttccgaggcacagcagcagaacaaattggaacagtattctggttctccttctcttctcttgggttcacttatacggagaagttgtcaaataatttggcaaagtttgtagtgatcatatgggtgtttttagtgcttatattgacgtcgacttacactgcaactctagcatcaatgatgacagtcaaacagatacagttaaactcaaggggaaactatataggttaccaatcgggttccttaggagttatagtgaacttgaatttcaaagggcttaagccatatcgttcaagtgaggagtattttgttgctttatcaaaaggaagcaagcataatggtgtttctggggttattgacgaggttccatacatcaacatcttcctcgcaaactattctgctgactactcgatgattaaaaccaagtctatcaccaatggttttgcctttgttttccctaaaggttcgaaattggttcaagatgtgtcaaggcaaattgaacgtctgagacaggaagaaaagcttatagagatggagaagatctggtttcttagaaaaacaactctcatgtctgatgaggatattaataataaagatcccaatacgattgacctctacgacatccgcggagatgagcaggaccggtccacgtcatcggaagtccggtggtggactagtggttgtcatcgaaacacgggcagaagcacaacatctctcaccggaagattccgattccggtttcaaatggtttcaccttcgacagccaaagatcgaaaacggcgccgcctcgaatcgactgacatcatcaatgtggttgtcgtcgaaacacgggcagaagcacaacatctctcaccggaagattccgattccggtttcagatggtttcgccttcgacagccaaagatcgaaaacgatgccgcctcgaatcgactgacatcatcaatgtcgattatcctccagtgctcgacgcagagtctccggcgatgttctcatcgagcagtagcccaccaagtctcatcatcaatgtcgattatcctccagtgctcgacgcaggttgtggcagagaagaaagatgattgggtgcccaaagcatcttcctcgagcattccttcgtctgaaactccttcagagtctccggcgatgttctcatcgagcagtagcccaccaagtccgacgccggcaggtttgtcgcctgaggacgacggttttcaaccgtcgtataccgatcattgggtcgacggtttgcaactaacttcgtcgtctgatggatcggcggatctgtcgacaagctgtcaacatactacacaaaaggcttcacacgacggtttaaaactgtcgtctgatattttgcatttctgtggtctatcgaggcgtcgtctgttggaacgtcgtcagacgacggttttcaaccgtcatataccgatcattgggtcgacggtttgcaactaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

1091

Amino Acids

122.43

Weight (kDa)

7.6

Isoelectric Point (pI)

47.4

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 533, 1572
AatII GACGTC 1 cut(s) 1979
Acc16I TGCGCA 1 cut(s) 464
Acc36I ACCTGC 2 cut(s) 2869, 2999
Acc65I GGTACC 1 cut(s) 1702
AccB1I GGYRCC 3 cut(s) 1702, 2607, 2908
AccBSI CCGCTC 1 cut(s) 356
AccI GTMKAC 5 cut(s) 1979, 3047, 3063, 3110, 3260
AccII CGCG 1 cut(s) 2454
AccIII TCCGGA 1 cut(s) 1250
AciI CCGC 7 cut(s) 356, 389, 2452, 2454, 2611, 2745, 3101
AcoI YGGCCR 1 cut(s) 390
AcsI RAATTY 8 cut(s) 820, 838, 1054, 1134, 1294, 1555, 1604, 2092
AcuI CTGAAG 2 cut(s) 501, 2937
AcyI GRCGYC 4 cut(s) 1976, 2608, 3002, 3199
AfaI GTAC 1 cut(s) 1704
AfiI CCNNNNNNNGG 4 cut(s) 259, 1257, 3057, 3254
AflII CTTAAG 1 cut(s) 2105
AflIII ACRYGT 1 cut(s) 1722
AgeI ACCGGT 1 cut(s) 2469
AhdI GACNNNNNGTC 2 cut(s) 2799, 3117
AhlI ACTAGT 1 cut(s) 2501
AjiI CACGTC 2 cut(s) 136, 2478
AjnI CCWGG 3 cut(s) 33, 1333, 1587
AjuI GAANNNNNNNTTGG 2 cut(s) 321, 353
AleI CACNNNNGTG 1 cut(s) 138
Alw21I GWGCWC 3 cut(s) 346, 2792, 2873
Alw26I GTCTC 5 cut(s) 414, 2329, 2807, 2845, 2964
Alw44I GTGCAC 1 cut(s) 342
Ama87I CYCGRG 1 cut(s) 2926
Aor13HI TCCGGA 1 cut(s) 1250
AoxI GGCC 5 cut(s) 36, 198, 390, 1226, 1331
ApaLI GTGCAC 1 cut(s) 342
ApeKI GCWGC 7 cut(s) 186, 296, 476, 1273, 1490, 1772, 1847
ApoI RAATTY 8 cut(s) 820, 838, 1054, 1134, 1294, 1555, 1604, 2092
ArsI GACNNNNNNTTYG 2 cut(s) 2314, 2346
AseI ATTAAT 3 cut(s) 105, 702, 2412
AsiGI ACCGGT 1 cut(s) 2469
Asp700I GAANNNNTTC 3 cut(s) 566, 969, 1419
Asp718I GGTACC 1 cut(s) 1702
AspLEI GCGC 3 cut(s) 465, 502, 2610
AspS9I GGNCC 3 cut(s) 199, 2467, 2472
AsuHPI GGTGA 7 cut(s) 284, 1142, 1214, 2251, 2536, 2571, 2670
AsuII TTCGAA 1 cut(s) 2294
AvaI CYCGRG 1 cut(s) 2926
AvaII GGWCC 2 cut(s) 2467, 2472
AxyI CCTNAGG 2 cut(s) 2071, 3021
BaeGI GKGCMC 2 cut(s) 346, 2913
BamHI GGATCC 2 cut(s) 952, 1340
BanI GGYRCC 3 cut(s) 1702, 2607, 2908
BanII GRGCYC 1 cut(s) 1021
Bbv12I GWGCWC 3 cut(s) 346, 2792, 2873
BbvI GCAGC 7 cut(s) 173, 283, 463, 1285, 1477, 1759, 1859
BccI CCATC 7 cut(s) 583, 983, 1070, 1171, 2353, 2700, 3086
BceAI ACGGC 2 cut(s) 1492, 2621
BcgI CGANNNNNNTGC 6 cut(s) 2723, 2757, 2907, 2941, 2997, 3031
BciT130I CCWGG 3 cut(s) 35, 1335, 1589
BclI TGATCA 2 cut(s) 469, 1944
BcoDI GTCTC 5 cut(s) 414, 2329, 2807, 2845, 2964
BcuI ACTAGT 1 cut(s) 2501
BfaI CTAG 5 cut(s) 1022, 1062, 1110, 1997, 2502
BfmI CTRYAG 3 cut(s) 232, 1473, 1560
BfoI RGCGCY 1 cut(s) 2611
BfrI CTTAAG 1 cut(s) 2105
BfuAI ACCTGC 2 cut(s) 2869, 2999
BglII AGATCT 2 cut(s) 1646, 2367
Bme1390I CCNGG 3 cut(s) 35, 1335, 1589
Bme18I GGWCC 2 cut(s) 2467, 2472
BmeRI GACNNNNNGTC 2 cut(s) 2799, 3117
BmeT110I CYCGRG 1 cut(s) 2926
BmgBI CACGTC 2 cut(s) 136, 2478
BmgT120I GGNCC 3 cut(s) 199, 2467, 2472
BmiI GGNNCC 7 cut(s) 954, 1342, 1704, 2068, 2193, 2609, 2910
BmrFI CCNGG 3 cut(s) 35, 1335, 1589
BmsI GCATC 8 cut(s) 905, 997, 1534, 1600, 1825, 2009, 2731, 2927
BpmI CTGGAG 3 cut(s) 1356, 2768, 2849
Bpu14I TTCGAA 1 cut(s) 2294
BpuEI CTTGAG 2 cut(s) 1583, 2020
BsaBI GATNNNNATC 1 cut(s) 213
BsaHI GRCGYC 4 cut(s) 1976, 2608, 3002, 3199
BsaJI CCNNGG 4 cut(s) 301, 1713, 1837, 2452
BsaWI WCCGGW 7 cut(s) 1250, 2469, 2490, 2546, 2562, 2680, 2696
BsaXI ACNNNNNCTCC 4 cut(s) 1901, 1931, 2067, 2097
Bsc4I CCNNNNNNNGG 4 cut(s) 259, 1257, 3057, 3254
Bse118I RCCGGY 2 cut(s) 2469, 3004
Bse1I ACTGG 5 cut(s) 1394, 1468, 1795, 2785, 2866
Bse21I CCTNAGG 2 cut(s) 2071, 3021
Bse8I GATNNNNATC 1 cut(s) 213
BseAI TCCGGA 1 cut(s) 1250
BseBI CCWGG 3 cut(s) 35, 1335, 1589
BseDI CCNNGG 4 cut(s) 301, 1713, 1837, 2452
BseGI GGATG 5 cut(s) 780, 1262, 1549, 1816, 2448
BseJI GATNNNNATC 1 cut(s) 213
BseLI CCNNNNNNNGG 4 cut(s) 259, 1257, 3057, 3254
BseMII CTCAG 4 cut(s) 196, 1664, 2324, 3012
BseNI ACTGG 5 cut(s) 1394, 1468, 1795, 2785, 2866
BseRI GAGGAG 3 cut(s) 637, 946, 2141
BseSI GKGCMC 2 cut(s) 346, 2913
BseXI GCAGC 7 cut(s) 173, 283, 463, 1285, 1477, 1759, 1859
BseYI CCCAGC 1 cut(s) 871
BsgI GTGCAG 1 cut(s) 1005
Bsh1236I CGCG 1 cut(s) 2454
BshFI GGCC 5 cut(s) 38, 200, 392, 1228, 1333
BshNI GGYRCC 3 cut(s) 1702, 2607, 2908
BshTI ACCGGT 1 cut(s) 2469
BsiHKAI GWGCWC 3 cut(s) 346, 2792, 2873
BsiHKCI CYCGRG 1 cut(s) 2926
BslFI GGGAC 2 cut(s) 539, 1579
BslI CCNNNNNNNGG 4 cut(s) 259, 1257, 3057, 3254
BsmAI GTCTC 5 cut(s) 414, 2329, 2807, 2845, 2964
BsmFI GGGAC 2 cut(s) 539, 1579
BsmI GAATGC 1 cut(s) 2931
BsnI GGCC 5 cut(s) 38, 200, 392, 1228, 1333
BsoBI CYCGRG 1 cut(s) 2926
Bsp119I TTCGAA 1 cut(s) 2294
Bsp1286I GDGCHC 5 cut(s) 346, 1021, 2792, 2873, 2913
Bsp13I TCCGGA 1 cut(s) 1250
BspACI CCGC 7 cut(s) 356, 389, 2452, 2454, 2611, 2745, 3101
BspANI GGCC 5 cut(s) 38, 200, 392, 1228, 1333
BspCNI CTCAG 4 cut(s) 195, 1663, 2325, 3013
BspEI TCCGGA 1 cut(s) 1250
BspFNI CGCG 1 cut(s) 2454
BspLI GGNNCC 7 cut(s) 954, 1342, 1704, 2068, 2193, 2609, 2910
BspMAI CTGCAG 1 cut(s) 1564
BspMI ACCTGC 2 cut(s) 2869, 2999
BspT104I TTCGAA 1 cut(s) 2294
BspT107I GGYRCC 3 cut(s) 1702, 2607, 2908
BspTI CTTAAG 1 cut(s) 2105
BsrBI CCGCTC 1 cut(s) 356
BsrFI RCCGGY 2 cut(s) 2469, 3004
BsrI ACTGG 5 cut(s) 1394, 1468, 1795, 2785, 2866
BssAI RCCGGY 2 cut(s) 2469, 3004
BssECI CCNNGG 4 cut(s) 301, 1713, 1837, 2452
BssNAI GTATAC 1 cut(s) 3048
BssNI GRCGYC 4 cut(s) 1976, 2608, 3002, 3199
BssT1I CCWWGG 2 cut(s) 301, 1713
Bst1107I GTATAC 1 cut(s) 3048
Bst2UI CCWGG 3 cut(s) 35, 1335, 1589
Bst6I CTCTTC 1 cut(s) 1891
BstACI GRCGYC 4 cut(s) 1976, 2608, 3002, 3199
BstAFI CTTAAG 1 cut(s) 2105
BstAPI GCANNNNNTGC 2 cut(s) 868, 1007
BstBI TTCGAA 1 cut(s) 2294
BstC8I GCNNGC 5 cut(s) 285, 738, 831, 2159, 3006
BstDEI CTNAG 8 cut(s) 182, 1379, 1650, 1684, 2071, 2333, 2378, 3021
BstDSI CCRYGG 1 cut(s) 2452
BstEII GGTNACC 1 cut(s) 2054
BstF5I GGATG 5 cut(s) 780, 1262, 1549, 1816, 2448
BstFNI CGCG 1 cut(s) 2454
BstH2I RGCGCY 1 cut(s) 2611
BstHHI GCGC 3 cut(s) 465, 502, 2610
BstMAI GTCTC 5 cut(s) 414, 2329, 2807, 2845, 2964
BstMWI GCNNNNNNNGC 6 cut(s) 293, 868, 1007, 1016, 1499, 1997
BstNI CCWGG 3 cut(s) 35, 1335, 1589
BstNSI RCATGY 2 cut(s) 725, 1726
BstPI GGTNACC 1 cut(s) 2054
BstSCI CCNGG 3 cut(s) 33, 1333, 1587
BstSFI CTRYAG 3 cut(s) 232, 1473, 1560
BstSLI GKGCMC 2 cut(s) 346, 2913
BstUI CGCG 1 cut(s) 2454
BstV1I GCAGC 7 cut(s) 173, 283, 463, 1285, 1477, 1759, 1859
BstX2I RGATCY 8 cut(s) 952, 993, 1064, 1340, 1646, 2367, 2422, 3103
BstYI RGATCY 8 cut(s) 952, 993, 1064, 1340, 1646, 2367, 2422, 3103
BstZ17I GTATAC 1 cut(s) 3048
Bsu36I CCTNAGG 2 cut(s) 2071, 3021
BsuRI GGCC 5 cut(s) 38, 200, 392, 1228, 1333
BtgI CCRYGG 1 cut(s) 2452
BtgZI GCGATG 2 cut(s) 2824, 2981
BtrI CACGTC 2 cut(s) 136, 2478
BtsCI GGATG 5 cut(s) 780, 1262, 1549, 1816, 2448
BtsI GCAGTG 2 cut(s) 472, 1986
BtsIMutI CAGTG 8 cut(s) 33, 472, 502, 1401, 1461, 1986, 2792, 2873
BveI ACCTGC 2 cut(s) 2869, 2999
Cac8I GCNNGC 5 cut(s) 285, 738, 831, 2159, 3006
CfoI GCGC 3 cut(s) 465, 502, 2610
Cfr10I RCCGGY 2 cut(s) 2469, 3004
Cfr13I GGNCC 3 cut(s) 199, 2467, 2472
Cfr42I CCGCGG 1 cut(s) 2455
CseI GACGC 4 cut(s) 2803, 2884, 3010, 3188
CsiI ACCWGGT 1 cut(s) 1587
Csp6I GTAC 1 cut(s) 1703
CspAI ACCGGT 1 cut(s) 2469
CviAII CATG 9 cut(s) 224, 722, 817, 835, 946, 1433, 1457, 1723, 2395
CviQI GTAC 1 cut(s) 1703
DdeI CTNAG 8 cut(s) 182, 1379, 1650, 1684, 2071, 2333, 2378, 3021
DinI GGCGCC 1 cut(s) 2609
DraI TTTAAA 4 cut(s) 1117, 1486, 1738, 3156
DriI GACNNNNNGTC 2 cut(s) 2799, 3117
EaeI YGGCCR 1 cut(s) 390
Eam1104I CTCTTC 1 cut(s) 1891
Eam1105I GACNNNNNGTC 2 cut(s) 2799, 3117
EarI CTCTTC 1 cut(s) 1891
EciI GGCGGA 1 cut(s) 3116
Eco130I CCWWGG 2 cut(s) 301, 1713
Eco24I GRGCYC 1 cut(s) 1021
Eco47I GGWCC 2 cut(s) 2467, 2472
Eco57I CTGAAG 2 cut(s) 501, 2937
Eco81I CCTNAGG 2 cut(s) 2071, 3021
Eco88I CYCGRG 1 cut(s) 2926
Eco91I GGTNACC 1 cut(s) 2054
EcoO65I GGTNACC 1 cut(s) 2054
EcoRII CCWGG 3 cut(s) 33, 1333, 1587
EcoT14I CCWWGG 2 cut(s) 301, 1713
EcoT38I GRGCYC 1 cut(s) 1021
EgeI GGCGCC 1 cut(s) 2609
EheI GGCGCC 1 cut(s) 2609
ErhI CCWWGG 2 cut(s) 301, 1713
FaeI CATG 9 cut(s) 227, 725, 820, 838, 949, 1436, 1460, 1726, 2398
FalI AAGNNNNNCTT 4 cut(s) 351, 383, 2334, 2366
FaqI GGGAC 2 cut(s) 539, 1579
FatI CATG 9 cut(s) 223, 721, 816, 834, 945, 1432, 1456, 1722, 2394
FauNDI CATATG 2 cut(s) 1003, 1949
FbaI TGATCA 2 cut(s) 469, 1944
FblI GTMKAC 5 cut(s) 1979, 3047, 3063, 3110, 3260
FokI GGATG 5 cut(s) 787, 1249, 1556, 1803, 2435
FriOI GRGCYC 1 cut(s) 1021
FspBI CTAG 5 cut(s) 1022, 1062, 1110, 1997, 2502
FspI TGCGCA 1 cut(s) 464
GlaI GCGC 3 cut(s) 464, 501, 2609
GsaI CCCAGC 1 cut(s) 875
GsuI CTGGAG 3 cut(s) 1356, 2768, 2849
HaeII RGCGCY 1 cut(s) 2611
HaeIII GGCC 5 cut(s) 38, 200, 392, 1228, 1333
HgaI GACGC 4 cut(s) 2803, 2884, 3010, 3188
HhaI GCGC 3 cut(s) 465, 502, 2610
Hin1I GRCGYC 4 cut(s) 1976, 2608, 3002, 3199
Hin1II CATG 9 cut(s) 227, 725, 820, 838, 949, 1436, 1460, 1726, 2398
Hin6I GCGC 3 cut(s) 463, 500, 2608
HinP1I GCGC 3 cut(s) 463, 500, 2608
HincII GTYRAC 5 cut(s) 1980, 3064, 3111, 3122, 3261
HindII GTYRAC 5 cut(s) 1980, 3064, 3111, 3122, 3261
HindIII AAGCTT 1 cut(s) 2348
HphI GGTGA 7 cut(s) 284, 1142, 1214, 2251, 2536, 2571, 2670
Hpy188III TCNNGA 9 cut(s) 149, 162, 974, 1251, 1316, 1439, 1600, 1804, 2306
HpyAV CCTTC 9 cut(s) 58, 161, 779, 917, 1891, 2592, 2726, 2946, 2961
HpyCH4IV ACGT 8 cut(s) 129, 135, 277, 528, 1976, 2329, 2477, 3214
HpyF10VI GCNNNNNNNGC 6 cut(s) 293, 868, 1007, 1016, 1499, 1997
HpyF3I CTNAG 8 cut(s) 182, 1379, 1650, 1684, 2071, 2333, 2378, 3021
HpySE526I ACGT 8 cut(s) 129, 135, 277, 528, 1976, 2329, 2477, 3214
Hsp92I GRCGYC 4 cut(s) 1976, 2608, 3002, 3199
Hsp92II CATG 9 cut(s) 227, 725, 820, 838, 949, 1436, 1460, 1726, 2398
HspAI GCGC 3 cut(s) 463, 500, 2608
KasI GGCGCC 1 cut(s) 2607
Kpn2I TCCGGA 1 cut(s) 1250
KpnI GGTACC 1 cut(s) 1706
KroI GCCGGC 1 cut(s) 3004
KroNI GCCGGC 1 cut(s) 3006
Ksp22I TGATCA 2 cut(s) 469, 1944
KspI CCGCGG 1 cut(s) 2455
LmnI GCTCC 2 cut(s) 1079, 1499
Lsp1109I GCAGC 7 cut(s) 173, 283, 463, 1285, 1477, 1759, 1859
LweI GCATC 8 cut(s) 905, 997, 1534, 1600, 1825, 2009, 2731, 2927
MabI ACCWGGT 1 cut(s) 1587
MaeI CTAG 5 cut(s) 1022, 1062, 1110, 1997, 2502
MaeII ACGT 8 cut(s) 129, 135, 277, 528, 1976, 2329, 2477, 3214
MaeIII GTNAC 6 cut(s) 43, 726, 802, 1459, 1627, 2054
MbiI CCGCTC 1 cut(s) 356
MfeI CAATTG 2 cut(s) 1308, 1494
MflI RGATCY 8 cut(s) 952, 993, 1064, 1340, 1646, 2367, 2422, 3103
MhlI GDGCHC 5 cut(s) 346, 1021, 2792, 2873, 2913
Mly113I GGCGCC 1 cut(s) 2608
MlyI GAGTC 4 cut(s) 863, 1332, 2809, 2966
MmeI TCCRAC 4 cut(s) 609, 1600, 3023, 3189
MroI TCCGGA 1 cut(s) 1250
MroNI GCCGGC 1 cut(s) 3004
MroXI GAANNNNTTC 3 cut(s) 566, 969, 1419
MslI CAYNNNNRTG 9 cut(s) 138, 194, 222, 323, 612, 1952, 2166, 2636, 3183
MspA1I CMGCKG 4 cut(s) 70, 186, 296, 2454
MspCI CTTAAG 1 cut(s) 2105
MspR9I CCNGG 3 cut(s) 35, 1335, 1589
MunI CAATTG 2 cut(s) 1308, 1494
Mva1269I GAATGC 1 cut(s) 2931
MvaI CCWGG 3 cut(s) 35, 1335, 1589
MvnI CGCG 1 cut(s) 2454
MwoI GCNNNNNNNGC 6 cut(s) 293, 868, 1007, 1016, 1499, 1997
NaeI GCCGGC 1 cut(s) 3006
NarI GGCGCC 1 cut(s) 2608
NdeI CATATG 2 cut(s) 1003, 1949
NgoMIV GCCGGC 1 cut(s) 3004
NlaIII CATG 9 cut(s) 227, 725, 820, 838, 949, 1436, 1460, 1726, 2398
NlaIV GGNNCC 7 cut(s) 954, 1342, 1704, 2068, 2193, 2609, 2910
NmuCI GTSAC 4 cut(s) 43, 726, 802, 1459
NsbI TGCGCA 1 cut(s) 464
NspI RCATGY 2 cut(s) 725, 1726
NspV TTCGAA 1 cut(s) 2294
OliI CACNNNNGTG 1 cut(s) 138
PaeR7I CTCGAG 1 cut(s) 2926
PciI ACATGT 1 cut(s) 1722
PctI GAATGC 1 cut(s) 2931
PdiI GCCGGC 1 cut(s) 3006
PdmI GAANNNNTTC 3 cut(s) 566, 969, 1419
PinAI ACCGGT 1 cut(s) 2469
PleI GAGTC 4 cut(s) 862, 1331, 2808, 2965
PluTI GGCGCC 1 cut(s) 2611
PpsI GAGTC 4 cut(s) 862, 1331, 2808, 2965
PscI ACATGT 1 cut(s) 1722
PshBI ATTAAT 3 cut(s) 105, 702, 2412
PsiI TTATAA 2 cut(s) 533, 1572
Psp6I CCWGG 3 cut(s) 33, 1333, 1587
PspEI GGTNACC 1 cut(s) 2054
PspFI CCCAGC 1 cut(s) 871
PspGI CCWGG 3 cut(s) 33, 1333, 1587
PspN4I GGNNCC 7 cut(s) 954, 1342, 1704, 2068, 2193, 2609, 2910
PspPI GGNCC 3 cut(s) 199, 2467, 2472
PspXI VCTCGAGB 1 cut(s) 2926
PstI CTGCAG 1 cut(s) 1564
PsuI RGATCY 8 cut(s) 952, 993, 1064, 1340, 1646, 2367, 2422, 3103
PvuII CAGCTG 3 cut(s) 70, 186, 296
RsaI GTAC 1 cut(s) 1704
RsaNI GTAC 1 cut(s) 1703
RseI CAYNNNNRTG 9 cut(s) 138, 194, 222, 323, 612, 1952, 2166, 2636, 3183
SacII CCGCGG 1 cut(s) 2455
SalI GTCGAC 4 cut(s) 1978, 3062, 3109, 3259
Sau96I GGNCC 3 cut(s) 199, 2467, 2472
SchI GAGTC 4 cut(s) 863, 1332, 2809, 2966
ScrFI CCNGG 3 cut(s) 35, 1335, 1589
SduI GDGCHC 5 cut(s) 346, 1021, 2792, 2873, 2913
SexAI ACCWGGT 1 cut(s) 1587
SfaNI GCATC 8 cut(s) 905, 997, 1534, 1600, 1825, 2009, 2731, 2927
SfcI CTRYAG 3 cut(s) 232, 1473, 1560
SfoI GGCGCC 1 cut(s) 2609
Sfr274I CTCGAG 1 cut(s) 2926
Sfr303I CCGCGG 1 cut(s) 2455
SfuI TTCGAA 1 cut(s) 2294
SgrBI CCGCGG 1 cut(s) 2455
SinI GGWCC 2 cut(s) 2467, 2472
SlaI CTCGAG 1 cut(s) 2926
SmiMI CAYNNNNRTG 9 cut(s) 138, 194, 222, 323, 612, 1952, 2166, 2636, 3183
SmlI CTYRAG 4 cut(s) 1598, 2035, 2105, 2926
SmoI CTYRAG 4 cut(s) 1598, 2035, 2105, 2926
SpeI ACTAGT 1 cut(s) 2501
SsiI CCGC 7 cut(s) 356, 389, 2452, 2454, 2611, 2745, 3101
SspDI GGCGCC 1 cut(s) 2607
SspI AATATT 1 cut(s) 637
SspMI CTAG 5 cut(s) 1022, 1062, 1110, 1997, 2502
StyD4I CCNGG 3 cut(s) 33, 1333, 1587
StyI CCWWGG 2 cut(s) 301, 1713
TaiI ACGT 8 cut(s) 132, 138, 280, 531, 1979, 2332, 2480, 3217
TauI GCSGC 3 cut(s) 392, 2613, 2747
TscAI CASTG 8 cut(s) 33, 472, 502, 1401, 1468, 1993, 2792, 2873
TseFI GTSAC 4 cut(s) 43, 726, 802, 1459
TseI GCWGC 7 cut(s) 186, 296, 476, 1273, 1490, 1772, 1847
Tsp45I GTSAC 4 cut(s) 43, 726, 802, 1459
TspDTI ATGAA 8 cut(s) 559, 609, 672, 833, 851, 1271, 1527, 1842
TspGWI ACGGA 1 cut(s) 1922
TspRI CASTG 8 cut(s) 33, 472, 502, 1401, 1468, 1993, 2792, 2873
Vha464I CTTAAG 1 cut(s) 2105
VneI GTGCAC 1 cut(s) 342
VpaK11BI GGWCC 2 cut(s) 2467, 2472
VspI ATTAAT 3 cut(s) 105, 702, 2412
XapI RAATTY 8 cut(s) 820, 838, 1054, 1134, 1294, 1555, 1604, 2092
XceI RCATGY 2 cut(s) 725, 1726
XhoI CTCGAG 1 cut(s) 2926
XmiI GTMKAC 5 cut(s) 1979, 3047, 3063, 3110, 3260
XmnI GAANNNNTTC 3 cut(s) 566, 969, 1419
XspI CTAG 5 cut(s) 1022, 1062, 1110, 1997, 2502
ZraI GACGTC 1 cut(s) 1977
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.