Rorug05G0353800

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000005
OG0000294
Physical Location & Seq
Forward (+)
44167898 .. 44173846
5949 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug05G0353800.1

Sequence Viewer

Length: 1683 bp
ATGCTGTTTAGCGGTGCCAAGATTTACAAGTTTGATTGTGTTGATATTACGGTGTTGAAGAATAGTAAATTTCGTGGCGGTTCCCCTGAGTTTCGAGACAAGCTCAGAAAGTATGCTATTGAAGTTGGGTTCAGCTTTGTGTTTATTAGAAATGATTGGGATAGAATTCATGTGGTTTGTTCCAATTGCGGAACCAAAGGATGTGAGTGGAATGTCCGTGGTTATGTATTGCCTGCAAATGGATGCTTTATTATTGGTGAGTTGGACAATGTCTACTTTTGCAAAGGTGTTCTTCGGAAGCAAAAACATAAGCTTTTGGGATCGAAAATTGTCAAGACATGTATTGAAGAGGACATTAGCTATAACTTGTCATTAAAGCCGAGGGAAATTATCAGCAAGTTCAAGTCAGCTTATAGGTTTGATATATCGTACAAGGTTGCTTGGAAAATAAAGCAGAAGGCTAGGGAAATGATTTATGGTTCTGAGGCTGATTCATTTAACATGCTAACTTGGTATAGGGAAGCTGTGTTTGATACTAACCCGGGATCTTCTTTTGTTTTGGAAGTTGATCCATTGAGTAATCGATTTCAGAGGCTTTTCCTAGCTTATGCAGGCTGCATTCAAGGCTATGAATTCTGTCTTCCTGTGTTGTATGTCGATGCCACTTTTGGGAAGAGTGTCTACAAGGGGCAGATTCTTTGTGCAACCGGAAAGAATGGAAATCATGGTGTTGGACTGTTGAGTTCTTTTGATAAGATATTTCCTGGTAATCCTCATCTTTTCTGTTACAAGCACTTGGCGCATAACCTTATGAGTAAATACAACGGTAAAAGATCTTCTGTTTTGAAAGATGATGTTAAAAAGAAGTTTTTTGAGTTAGCATATTCATGTACTGAAAAGGAATATTGTTTAGAGTTGAGAGAAGTTGGTGGCGCTGATATTATAGATCCATTTCTTGCTGATATGCCTCTTGAAAATTGGTGCCGCGCATTTTTCCCTGGATGCCGTTATGGAATTATGGCTAATAGTATAGCTGAATCTTTTAATGCTTGGTTTTCTATTGAGAGTGAGATGCCAGTTTACACTATGTTTGATCAGACTCGGATTAAGGTGATGCAGATGATGGGTGAAAGGAGAGACGAGGCTCAGGTTTCGACATCACAACTTACTCCTGTTATGGAGGGTCGTTTGAAAGAAGGTATGGAGAAAGCTTGGCGTTTCAATGTGCATTACTCCGATACAAATATTTATGAGGTTAGATCAAAGTATTCTTATGTTGTGGACCTTGAAACTCCTTCATGCTCGTGTAAAAAATGGCAGATTAACTGCTTCCCTTGCTACCACGGTCTCGCTGCAATTCAAGCTGCCTCAATGGATGTTTATGCTTTTATTGATAAGCATTTTCATGTTGATTATTACAAGAAGTGCTATGATTTTCCAATTTATCCAATATCTAATGTTGACATGGCTTCTTCGGAATCTGCAAGCAATGACTTCATACTTCCTCCGAACACAAAGAGGCCACCTGGGAGGCCTAGGCTCAAGAGGCAGCATAGAGTTCATGTGAACAAAGCGTTTTTTCTCATTGTCGATGATAAGCAGTGTGTAGTGCTGGCTGTAGCAATGGTGGATCGGGATAAGCACCTTGGGGTAGCTGAAGTTACTCCACAGTTGTTCAATTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

560

Amino Acids

64.38

Weight (kDa)

8.77

Isoelectric Point (pI)

29.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DBD_Tnp_Mut PF03108 30 - 85 7e-08 MuDR family transposase
SWIM PF04434 425 - 455 2.3e-07 SWIM zinc finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 14, 981
AccI GTMKAC 2 cut(s) 273, 681
AccII CGCG 1 cut(s) 987
AciI CCGC 4 cut(s) 12, 78, 189, 985
AclWI GGATC 5 cut(s) 328, 553, 563, 941, 1638
AcsI RAATTY 3 cut(s) 68, 165, 632
AcuI CTGAAG 1 cut(s) 1677
AfaI GTAC 2 cut(s) 431, 892
AfiI CCNNNNNNNGG 2 cut(s) 239, 669
AflIII ACRYGT 1 cut(s) 338
AjnI CCWGG 3 cut(s) 763, 997, 1525
Alw26I GTCTC 3 cut(s) 90, 1131, 1352
AlwI GGATC 5 cut(s) 328, 553, 563, 941, 1638
Ama87I CYCGRG 1 cut(s) 541
AoxI GGCC 2 cut(s) 1520, 1532
ApeKI GCWGC 4 cut(s) 615, 1352, 1364, 1549
ApoI RAATTY 3 cut(s) 68, 165, 632
AspA2I CCTAGG 1 cut(s) 1535
AspLEI GCGC 3 cut(s) 802, 935, 989
AspS9I GGNCC 1 cut(s) 1282
AsuC2I CCSGG 2 cut(s) 542, 543
AsuHPI GGTGA 3 cut(s) 269, 1123, 1139
AvaI CYCGRG 1 cut(s) 541
AvaII GGWCC 1 cut(s) 1282
AvrII CCTAGG 1 cut(s) 1535
BanI GGYRCC 2 cut(s) 14, 981
BarI GAAGNNNNNNTAC 4 cut(s) 665, 697, 820, 852
BauI CACGAG 1 cut(s) 1303
BbsI GAAGAC 1 cut(s) 632
BbvI GCAGC 4 cut(s) 602, 1339, 1351, 1561
BccI CCATC 1 cut(s) 1117
BceAI ACGGC 1 cut(s) 990
BciT130I CCWGG 3 cut(s) 765, 999, 1527
BclI TGATCA 1 cut(s) 1093
BcnI CCSGG 2 cut(s) 542, 543
BcoDI GTCTC 3 cut(s) 90, 1131, 1352
BfaI CTAG 3 cut(s) 462, 602, 1536
BfmI CTRYAG 1 cut(s) 1617
BfoI RGCGCY 1 cut(s) 936
BglII AGATCT 1 cut(s) 833
BisI GCNGC 5 cut(s) 616, 985, 1353, 1365, 1550
BlnI CCTAGG 1 cut(s) 1535
BlsI GCNGC 5 cut(s) 617, 986, 1354, 1366, 1551
Bme1390I CCNGG 5 cut(s) 542, 543, 765, 999, 1527
Bme18I GGWCC 1 cut(s) 1282
BmeT110I CYCGRG 1 cut(s) 541
BmgT120I GGNCC 1 cut(s) 1282
BmiI GGNNCC 4 cut(s) 16, 82, 193, 983
BmrFI CCNGG 5 cut(s) 542, 543, 765, 999, 1527
BmsI GCATC 5 cut(s) 233, 649, 992, 1062, 1104
BpiI GAAGAC 1 cut(s) 632
BplI GAGNNNNNCTC 2 cut(s) 87, 119
Bpu10I CCTNAGC 1 cut(s) 1146
BpuEI CTTGAG 1 cut(s) 1526
BpuMI CCSGG 2 cut(s) 542, 543
Bsa29I ATCGAT 1 cut(s) 583
BsaI GGTCTC 1 cut(s) 1352
BsaJI CCNNGG 8 cut(s) 217, 380, 541, 997, 1342, 1526, 1535, 1645
BsaWI WCCGGW 1 cut(s) 707
Bsc4I CCNNNNNNNGG 2 cut(s) 239, 669
Bse1I ACTGG 1 cut(s) 1076
Bse3DI GCAATG 2 cut(s) 1495, 1629
BseBI CCWGG 3 cut(s) 765, 999, 1527
BseCI ATCGAT 1 cut(s) 583
BseDI CCNNGG 8 cut(s) 217, 380, 541, 997, 1342, 1526, 1535, 1645
BseGI GGATG 4 cut(s) 206, 248, 1007, 1381
BseLI CCNNNNNNNGG 2 cut(s) 239, 669
BseMI GCAATG 2 cut(s) 1495, 1629
BseMII CTCAG 4 cut(s) 78, 118, 474, 1160
BseNI ACTGG 1 cut(s) 1076
BseXI GCAGC 4 cut(s) 602, 1339, 1351, 1561
Bsh1236I CGCG 1 cut(s) 987
BshFI GGCC 2 cut(s) 1522, 1534
BshNI GGYRCC 2 cut(s) 14, 981
BshVI ATCGAT 1 cut(s) 583
BsiHKCI CYCGRG 1 cut(s) 541
BsiSI CCGG 2 cut(s) 542, 708
BslI CCNNNNNNNGG 2 cut(s) 239, 669
BsmAI GTCTC 3 cut(s) 90, 1131, 1352
BsmBI CGTCTC 1 cut(s) 1131
BsmI GAATGC 1 cut(s) 618
BsnI GGCC 2 cut(s) 1522, 1534
Bso31I GGTCTC 1 cut(s) 1352
BsoBI CYCGRG 1 cut(s) 541
Bsp143I GATC 8 cut(s) 320, 545, 568, 833, 946, 1093, 1259, 1630
BspACI CCGC 4 cut(s) 12, 78, 189, 985
BspANI GGCC 2 cut(s) 1522, 1534
BspCNI CTCAG 4 cut(s) 79, 117, 475, 1159
BspDI ATCGAT 1 cut(s) 583
BspFNI CGCG 1 cut(s) 987
BspLI GGNNCC 4 cut(s) 16, 82, 193, 983
BspPI GGATC 5 cut(s) 328, 553, 563, 941, 1638
BspT107I GGYRCC 2 cut(s) 14, 981
BspTNI GGTCTC 1 cut(s) 1352
BsrDI GCAATG 2 cut(s) 1495, 1629
BsrI ACTGG 1 cut(s) 1076
BssECI CCNNGG 8 cut(s) 217, 380, 541, 997, 1342, 1526, 1535, 1645
BssMI GATC 8 cut(s) 320, 545, 568, 833, 946, 1093, 1259, 1630
BssSI CACGAG 1 cut(s) 1303
BssT1I CCWWGG 2 cut(s) 1535, 1645
Bst2BI CACGAG 1 cut(s) 1303
Bst2UI CCWGG 3 cut(s) 765, 999, 1527
Bst4CI ACNGT 5 cut(s) 52, 738, 827, 1346, 1671
Bst6I CTCTTC 2 cut(s) 342, 668
BstC8I GCNNGC 4 cut(s) 234, 613, 1486, 1614
BstDEI CTNAG 4 cut(s) 87, 104, 483, 1146
BstDSI CCRYGG 2 cut(s) 217, 1342
BstF5I GGATG 4 cut(s) 206, 248, 1007, 1381
BstFNI CGCG 1 cut(s) 987
BstH2I RGCGCY 1 cut(s) 936
BstHHI GCGC 3 cut(s) 802, 935, 989
BstKTI GATC 8 cut(s) 323, 548, 571, 836, 949, 1096, 1262, 1633
BstMAI GTCTC 3 cut(s) 90, 1131, 1352
BstMBI GATC 8 cut(s) 320, 545, 568, 833, 946, 1093, 1259, 1630
BstMWI GCNNNNNNNGC 5 cut(s) 624, 799, 1335, 1361, 1546
BstNI CCWGG 3 cut(s) 765, 999, 1527
BstNSI RCATGY 2 cut(s) 342, 505
BstSCI CCNGG 5 cut(s) 540, 541, 763, 997, 1525
BstSFI CTRYAG 1 cut(s) 1617
BstUI CGCG 1 cut(s) 987
BstV1I GCAGC 4 cut(s) 602, 1339, 1351, 1561
BstV2I GAAGAC 1 cut(s) 632
BstX2I RGATCY 3 cut(s) 545, 833, 946
BstYI RGATCY 3 cut(s) 545, 833, 946
Bsu15I ATCGAT 1 cut(s) 583
BsuRI GGCC 2 cut(s) 1522, 1534
BsuTUI ATCGAT 1 cut(s) 583
BtgI CCRYGG 2 cut(s) 217, 1342
BtsCI GGATG 4 cut(s) 206, 248, 1007, 1381
BtsI GCAGTG 1 cut(s) 1607
BtsIMutI CAGTG 1 cut(s) 1607
Cac8I GCNNGC 4 cut(s) 234, 613, 1486, 1614
CfoI GCGC 3 cut(s) 802, 935, 989
Cfr13I GGNCC 1 cut(s) 1282
Cfr9I CCCGGG 1 cut(s) 541
ClaI ATCGAT 1 cut(s) 583
Csp6I GTAC 2 cut(s) 430, 891
CviAII CATG 9 cut(s) 170, 339, 502, 725, 888, 1299, 1406, 1465, 1562
CviQI GTAC 2 cut(s) 430, 891
DdeI CTNAG 4 cut(s) 87, 104, 483, 1146
DpnI GATC 8 cut(s) 322, 547, 570, 835, 948, 1095, 1261, 1632
DpnII GATC 8 cut(s) 320, 545, 568, 833, 946, 1093, 1259, 1630
Eam1104I CTCTTC 2 cut(s) 342, 668
EarI CTCTTC 2 cut(s) 342, 668
Eco130I CCWWGG 2 cut(s) 1535, 1645
Eco147I AGGCCT 1 cut(s) 1534
Eco31I GGTCTC 1 cut(s) 1352
Eco47I GGWCC 1 cut(s) 1282
Eco57I CTGAAG 1 cut(s) 1677
Eco88I CYCGRG 1 cut(s) 541
EcoRI GAATTC 2 cut(s) 165, 632
EcoRII CCWGG 3 cut(s) 763, 997, 1525
EcoT14I CCWWGG 2 cut(s) 1535, 1645
ErhI CCWWGG 2 cut(s) 1535, 1645
Esp3I CGTCTC 1 cut(s) 1131
FaeI CATG 9 cut(s) 173, 342, 505, 728, 891, 1302, 1409, 1468, 1565
FalI AAGNNNNNCTT 2 cut(s) 276, 308
FatI CATG 9 cut(s) 169, 338, 501, 724, 887, 1298, 1405, 1464, 1561
FbaI TGATCA 1 cut(s) 1093
FblI GTMKAC 2 cut(s) 273, 681
Fnu4HI GCNGC 5 cut(s) 616, 985, 1353, 1365, 1550
FokI GGATG 4 cut(s) 213, 255, 1014, 1388
Fsp4HI GCNGC 5 cut(s) 616, 985, 1353, 1365, 1550
FspBI CTAG 3 cut(s) 462, 602, 1536
GlaI GCGC 3 cut(s) 801, 934, 988
GluI GCNGC 5 cut(s) 616, 985, 1353, 1365, 1550
HaeII RGCGCY 1 cut(s) 936
HaeIII GGCC 2 cut(s) 1522, 1534
HapII CCGG 2 cut(s) 542, 708
HhaI GCGC 3 cut(s) 802, 935, 989
Hin1II CATG 9 cut(s) 173, 342, 505, 728, 891, 1302, 1409, 1468, 1565
Hin6I GCGC 3 cut(s) 800, 933, 987
HinP1I GCGC 3 cut(s) 800, 933, 987
HincII GTYRAC 1 cut(s) 1462
HindII GTYRAC 1 cut(s) 1462
HindIII AAGCTT 2 cut(s) 311, 1209
HinfI GANTC 5 cut(s) 491, 694, 1037, 1099, 1478
HpaII CCGG 2 cut(s) 542, 708
HphI GGTGA 3 cut(s) 269, 1123, 1139
Hpy166II GTNNAC 6 cut(s) 274, 682, 1081, 1282, 1462, 1567
Hpy188I TCNGA 9 cut(s) 107, 297, 484, 591, 1098, 1104, 1237, 1477, 1509
Hpy188III TCNNGA 5 cut(s) 95, 334, 971, 1543, 1634
Hpy8I GTNNAC 6 cut(s) 274, 682, 1081, 1282, 1462, 1567
HpyAV CCTTC 3 cut(s) 451, 1190, 1305
HpyCH4III ACNGT 5 cut(s) 52, 738, 827, 1346, 1671
HpyCH4V TGCA 9 cut(s) 236, 282, 611, 618, 704, 1117, 1228, 1355, 1484
HpyF10VI GCNNNNNNNGC 5 cut(s) 624, 799, 1335, 1361, 1546
HpyF3I CTNAG 4 cut(s) 87, 104, 483, 1146
Hsp92II CATG 9 cut(s) 173, 342, 505, 728, 891, 1302, 1409, 1468, 1565
HspAI GCGC 3 cut(s) 800, 933, 987
Ksp22I TGATCA 1 cut(s) 1093
Kzo9I GATC 8 cut(s) 320, 545, 568, 833, 946, 1093, 1259, 1630
Lsp1109I GCAGC 4 cut(s) 602, 1339, 1351, 1561
LweI GCATC 5 cut(s) 233, 649, 992, 1062, 1104
MaeI CTAG 3 cut(s) 462, 602, 1536
MaeIII GTNAC 2 cut(s) 785, 1660
MalI GATC 8 cut(s) 322, 547, 570, 835, 948, 1095, 1261, 1632
MboI GATC 8 cut(s) 320, 545, 568, 833, 946, 1093, 1259, 1630
MboII GAAGA 8 cut(s) 70, 284, 359, 540, 632, 685, 828, 1464
MfeI CAATTG 1 cut(s) 184
MflI RGATCY 3 cut(s) 545, 833, 946
MlyI GAGTC 1 cut(s) 1093
MmeI TCCRAC 2 cut(s) 243, 712
MseI TTAA 6 cut(s) 374, 498, 858, 1044, 1107, 1323
MslI CAYNNNNRTG 3 cut(s) 886, 1303, 1404
MspI CCGG 2 cut(s) 542, 708
MspR9I CCNGG 5 cut(s) 542, 543, 765, 999, 1527
MunI CAATTG 1 cut(s) 184
Mva1269I GAATGC 1 cut(s) 618
MvaI CCWGG 3 cut(s) 765, 999, 1527
MvnI CGCG 1 cut(s) 987
MwoI GCNNNNNNNGC 5 cut(s) 624, 799, 1335, 1361, 1546
NciI CCSGG 2 cut(s) 542, 543
NdeII GATC 8 cut(s) 320, 545, 568, 833, 946, 1093, 1259, 1630
NlaIII CATG 9 cut(s) 173, 342, 505, 728, 891, 1302, 1409, 1468, 1565
NlaIV GGNNCC 4 cut(s) 16, 82, 193, 983
NmeAIII GCCGAG 1 cut(s) 405
NspI RCATGY 2 cut(s) 342, 505
PceI AGGCCT 1 cut(s) 1534
PciI ACATGT 1 cut(s) 338
PctI GAATGC 1 cut(s) 618
PfeI GAWTC 4 cut(s) 491, 694, 1037, 1478
PflFI GACNNNGTC 1 cut(s) 269
PkrI GCNGC 5 cut(s) 617, 986, 1354, 1366, 1551
PleI GAGTC 1 cut(s) 1093
PpsI GAGTC 1 cut(s) 1093
PscI ACATGT 1 cut(s) 338
Psp6I CCWGG 3 cut(s) 763, 997, 1525
PspGI CCWGG 3 cut(s) 763, 997, 1525
PspN4I GGNNCC 4 cut(s) 16, 82, 193, 983
PspPI GGNCC 1 cut(s) 1282
PsuI RGATCY 3 cut(s) 545, 833, 946
PsyI GACNNNGTC 1 cut(s) 269
RsaI GTAC 2 cut(s) 431, 892
RsaNI GTAC 2 cut(s) 430, 891
RseI CAYNNNNRTG 3 cut(s) 886, 1303, 1404
SaqAI TTAA 6 cut(s) 374, 498, 858, 1044, 1107, 1323
SatI GCNGC 5 cut(s) 616, 985, 1353, 1365, 1550
Sau3AI GATC 8 cut(s) 320, 545, 568, 833, 946, 1093, 1259, 1630
Sau96I GGNCC 1 cut(s) 1282
SchI GAGTC 1 cut(s) 1093
ScrFI CCNGG 5 cut(s) 542, 543, 765, 999, 1527
SfaNI GCATC 5 cut(s) 233, 649, 992, 1062, 1104
SfcI CTRYAG 1 cut(s) 1617
SinI GGWCC 1 cut(s) 1282
SmaI CCCGGG 1 cut(s) 543
SmiMI CAYNNNNRTG 3 cut(s) 886, 1303, 1404
SmlI CTYRAG 1 cut(s) 1541
SmoI CTYRAG 1 cut(s) 1541
SseBI AGGCCT 1 cut(s) 1534
SsiI CCGC 4 cut(s) 12, 78, 189, 985
SspI AATATT 2 cut(s) 905, 1246
SspMI CTAG 3 cut(s) 462, 602, 1536
StuI AGGCCT 1 cut(s) 1534
StyD4I CCNGG 5 cut(s) 540, 541, 763, 997, 1525
StyI CCWWGG 2 cut(s) 1535, 1645
TaaI ACNGT 5 cut(s) 52, 738, 827, 1346, 1671
TaqI TCGA 6 cut(s) 94, 323, 583, 657, 1154, 1590
TatI WGTACW 1 cut(s) 890
TauI GCSGC 1 cut(s) 987
TfiI GAWTC 4 cut(s) 491, 694, 1037, 1478
Tru1I TTAA 6 cut(s) 374, 498, 858, 1044, 1107, 1323
Tru9I TTAA 6 cut(s) 374, 498, 858, 1044, 1107, 1323
TscAI CASTG 1 cut(s) 1607
TseI GCWGC 4 cut(s) 615, 1352, 1364, 1549
TspDTI ATGAA 8 cut(s) 158, 483, 645, 876, 1287, 1394, 1486, 1550
TspGWI ACGGA 1 cut(s) 206
TspMI CCCGGG 1 cut(s) 541
TspRI CASTG 1 cut(s) 1607
Tth111I GACNNNGTC 1 cut(s) 269
VpaK11BI GGWCC 1 cut(s) 1282
XapI RAATTY 3 cut(s) 68, 165, 632
XceI RCATGY 2 cut(s) 342, 505
XmaI CCCGGG 1 cut(s) 541
XmaJI CCTAGG 1 cut(s) 1535
XmiI GTMKAC 2 cut(s) 273, 681
XspI CTAG 3 cut(s) 462, 602, 1536
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.