Rroxscaffold_4G00312490

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000294
Physical Location & Seq
Reverse (-)
35492745 .. 35497021
4277 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00312490.1

Sequence Viewer

Length: 2208 bp
ATGTCTCAACCTATTATTCCTTCTCCTCCTCTGACTCATAGATATCCCTTCTTCATTGAGATCAGACAGGATGAAACTTCTCAGGTTATGGGAATTGTTTCCCTTATTAAAACATATAAATGGAAGGATGTTATCCTTCTTTATGAGAGCACAAAATATGCATACAACATCATTCCATCTTTGATTAGTTCTTTCCAAGAGAAAAATGTCTATATTTCATTTAAGAGTTCCATATCTGCCTCCTCAACAAATCAACAAATCATTGAGGAGCTCCACAAGCTCATGATGTTGAAGACTAGGATAATTGTGGTGCATATTTCCCATGTGCTCATGCCTCGCCTATTCTTAAATGCAAAAAGGTTAGGAATGATGAGAGAAGGGTATGCCTGGATTGTGACATCAACTAGTATGAATTTCTTGCAATCCCTGGACTTATCTGTCATTGAGTCTATGCAAGGAGTTCTGGGTTTCAAGTCTTATATTCCGGCTTCAACCAACCTCCACAAACTTACTTCCAGAATCAGGAGAAAATTTTACATTGAGGAGCCTGATATGGAACTAGGTAGGGAGTTAAGTGCAGATGGAATCTGGGCATATGATGCAACTTGGGCTCTATCAGAAGCAGTTGAGAGGACAAAAATCAAAAGTTCTACTACTGGATCCTCCAAGCATGGAGTTGACCTTTTTAGAGAGATTCTGCAAACTAGATTTAAAGGTTTAAGTGGTGAAGTTAGATATCCAAATGGGAGCTTGATTTCAAGTGGATTTGAGATAGTGAACGTAATCGGAACAGGGGTCAGAAGAGTTGGATTTTGGCCTAATGAAGAAGAAAAAATCACGAAAGAGTCACTCCCACTTAGTAACAGAAGGAATGCACTTTCCACAAACCATCTGGAAACAATCATATGGCCTGGAGGATCATCAACCATCGTGAGAAGTTCCAAGAGGCGACTGAGTGGAATTAAACTGAAAGTTGGGGTTCCAGTAAAAATAGGGTTCAAGGAACTTGTGCGTGTAGAGCATGATCAACAAACCAATAGAACTCATGTTACAGGCTTCTGTATAGACGTATTCGAAGCTGCAATTAGAGGATTGCCTTATAAAGTACATTATGAGTATATTCCATTTGAGGATTCCGAGTTAGTTGGGGGGTACAACGATCTAGTTTACAAGGTTTATCTACAGTTCTTGTTTGATTTGAGCATTTACTTACGACAAATTGGGATGTATATAAACCAGACATATGATGCTGTTGCTGGAGATATAACGATCACACCGAATAGATCTTTGTATGTTGATTTTACAATACCATTTACTGACATGGGTGTGGGAATCTTAGTACGGAATGAAAAGGAAAACATGTGGGTTTTCTTGGAACCTCTGTCAGCAAATCTTTGGATGACTAGTGGTGGTTTTTTTTGGATCGAGCTCCTCTGCATTGACTATATCTGTGAAACTATAGAACTGAATTTGTCTAGTGTTGCAGGGGAAAAGTTATTGAACAACTTGGCCAAGTTTGTCACGATCATCTGGGTTTTTGTAGTGCTTATTTTGACATCCAGTTATACTGCAACTTTAGCATCAATGCTGACAGTAAAACAGATAAATTTAAACTCAAGAGGTAACAATATAGCTGACCTTGTGGTTTTTGGAGGGCCGAAGCATAAGTTGTACTATCATACAGTTGAACAATTTGCTGATTCTTTATCAAGAGGAAGTAAGCATGGTGGTGTTTCTGCTATCATCGAAGAGATTCCATACCTCAAAATCTTCCTAGCAAAGTATCCTGCTGACTACTCCATGATTAAACCCAAGTTATTAACTACCAATGGTTTTGGCTTTGTTTTTCCTAAAGGTTCTAAATTGGTCCGTGACATGTCGAGGCAAATTGAAATTTTAAGAGAAGAAGGAAAGCTTTTAGAGATGGAAAAGGCCTGGTTTCAGATCTCAGATGCAGTGAATAGTCCTAATCCCGGTACTCTTAACCTCAGCAGCTTTCTAGGTTTATTCCTTGTTAGTGGCGTTTCTTCAGCTGCTGCTCTTATACTATTCTTCATTTTGTCCCTCAAAGATAGATGGCATGTCCTAAAGATAAGCAAAGCTAGATCCCTGGGTAGAGGACAGCTGATGCAACTTATAAGAATGTCCCTTTCTAACAAAGTATCCAATGCAGATGAACACATCAATACACAGATAGTGGATTCATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan Lig_chan-Glu_bd SBP_bac_3

Protein Analysis

735

Amino Acids

83.17

Weight (kDa)

9.11

Isoelectric Point (pI)

41.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ANF_receptor PF01094 13 - 263 1.3e-52 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 342 - 450 1.9e-07 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 411 - 648 1.8e-10 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 496 - 675 6.4e-12 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1101, 2138
AasI GACNNNNNNGTC 1 cut(s) 437
AclWI GGATC 5 cut(s) 654, 667, 925, 1430, 2100
AcoI YGGCCR 1 cut(s) 1509
AcsI RAATTY 5 cut(s) 412, 530, 1468, 1606, 1893
AcuI CTGAAG 1 cut(s) 2013
AfaI GTAC 5 cut(s) 1107, 1154, 1341, 1673, 1978
AfiI CCNNNNNNNGG 2 cut(s) 522, 1973
AflIII ACRYGT 2 cut(s) 1359, 1875
AgsI TTSAA 8 cut(s) 292, 472, 492, 759, 1000, 1501, 1688, 1892
AhlI ACTAGT 2 cut(s) 404, 1403
AjnI CCWGG 5 cut(s) 386, 426, 910, 1934, 2109
Alw21I GWGCWC 4 cut(s) 152, 273, 330, 1431
Alw26I GTCTC 1 cut(s) 9
AlwI GGATC 5 cut(s) 654, 667, 925, 1430, 2100
AlwNI CAGNNNCTG 1 cut(s) 2036
AoxI GGCC 5 cut(s) 815, 908, 1509, 1655, 1932
ApeKI GCWGC 4 cut(s) 1079, 1992, 2033, 2036
ApoI RAATTY 5 cut(s) 412, 530, 1468, 1606, 1893
Asp700I GAANNNNTTC 2 cut(s) 97, 1752
AspS9I GGNCC 2 cut(s) 1655, 1867
AsuC2I CCSGG 1 cut(s) 1974
AsuHPI GGTGA 1 cut(s) 737
AsuII TTCGAA 1 cut(s) 1074
AvaII GGWCC 1 cut(s) 1867
BalI TGGCCA 1 cut(s) 1511
BamHI GGATCC 1 cut(s) 659
BanII GRGCYC 3 cut(s) 273, 613, 1431
BbsI GAAGAC 1 cut(s) 299
Bbv12I GWGCWC 4 cut(s) 152, 273, 330, 1431
BbvCI CCTCAGC 1 cut(s) 1988
BbvI GCAGC 4 cut(s) 1066, 2004, 2020, 2023
BccI CCATC 6 cut(s) 184, 575, 897, 935, 1918, 2070
BciT130I CCWGG 5 cut(s) 388, 428, 912, 1936, 2111
BciVI GTATCC 2 cut(s) 1794, 2173
BclI TGATCA 1 cut(s) 1024
BcnI CCSGG 1 cut(s) 1974
BcoDI GTCTC 1 cut(s) 9
BcuI ACTAGT 2 cut(s) 404, 1403
BfmI CTRYAG 2 cut(s) 1181, 1458
BfuI GTATCC 2 cut(s) 1794, 2173
BglII AGATCT 2 cut(s) 1283, 1944
BisI GCNGC 4 cut(s) 1080, 1993, 2034, 2037
BlsI GCNGC 4 cut(s) 1081, 1994, 2035, 2038
Bme1390I CCNGG 6 cut(s) 388, 428, 912, 1936, 1974, 2111
Bme18I GGWCC 1 cut(s) 1867
BmgT120I GGNCC 2 cut(s) 1655, 1867
BmiI GGNNCC 4 cut(s) 546, 661, 981, 1377
BmrFI CCNGG 6 cut(s) 388, 428, 912, 1936, 1974, 2111
BmsI GCATC 5 cut(s) 589, 1237, 1589, 1942, 2118
BpiI GAAGAC 1 cut(s) 299
BpmI CTGGAG 2 cut(s) 933, 1278
Bpu10I CCTNAGC 1 cut(s) 1988
Bpu14I TTCGAA 1 cut(s) 1074
BpuEI CTTGAG 1 cut(s) 1600
BpuMI CCSGG 1 cut(s) 1974
BsaJI CCNNGG 3 cut(s) 426, 2109, 2110
Bsc4I CCNNNNNNNGG 2 cut(s) 522, 1973
Bse1I ACTGG 3 cut(s) 661, 983, 1560
BseBI CCWGG 5 cut(s) 388, 428, 912, 1936, 2111
BseDI CCNNGG 3 cut(s) 426, 2109, 2110
BseGI GGATG 5 cut(s) 76, 133, 1230, 1404, 1556
BseLI CCNNNNNNNGG 2 cut(s) 522, 1973
BseMII CTCAG 4 cut(s) 95, 944, 1962, 2002
BseNI ACTGG 3 cut(s) 661, 983, 1560
BseRI GAGGAG 6 cut(s) 15, 18, 232, 281, 557, 1421
BseXI GCAGC 4 cut(s) 1066, 2004, 2020, 2023
BsgI GTGCAG 1 cut(s) 597
BshFI GGCC 5 cut(s) 817, 910, 1511, 1657, 1934
BsiHKAI GWGCWC 4 cut(s) 152, 273, 330, 1431
BsiSI CCGG 2 cut(s) 485, 1974
BslFI GGGAC 2 cut(s) 2047, 2131
BslI CCNNNNNNNGG 2 cut(s) 522, 1973
BsmAI GTCTC 1 cut(s) 9
BsmFI GGGAC 2 cut(s) 2047, 2131
BsmI GAATGC 1 cut(s) 877
BsnI GGCC 5 cut(s) 817, 910, 1511, 1657, 1934
Bsp119I TTCGAA 1 cut(s) 1074
Bsp1286I GDGCHC 5 cut(s) 152, 273, 330, 613, 1431
BspANI GGCC 5 cut(s) 817, 910, 1511, 1657, 1934
BspCNI CTCAG 4 cut(s) 94, 945, 1961, 2001
BspHI TCATGA 1 cut(s) 282
BspLI GGNNCC 4 cut(s) 546, 661, 981, 1377
BspPI GGATC 5 cut(s) 654, 667, 925, 1430, 2100
BspT104I TTCGAA 1 cut(s) 1074
BsrI ACTGG 3 cut(s) 661, 983, 1560
BssECI CCNNGG 3 cut(s) 426, 2109, 2110
Bst2UI CCWGG 5 cut(s) 388, 428, 912, 1936, 2111
Bst4CI ACNGT 3 cut(s) 1185, 1594, 1684
Bst6I CTCTTC 2 cut(s) 796, 1743
BstAPI GCANNNNNTGC 1 cut(s) 599
BstBI TTCGAA 1 cut(s) 1074
BstDEI CTNAG 6 cut(s) 81, 857, 953, 1336, 1948, 1988
BstF5I GGATG 5 cut(s) 76, 133, 1230, 1404, 1556
BstMAI GTCTC 1 cut(s) 9
BstMWI GCNNNNNNNGC 5 cut(s) 277, 599, 608, 1018, 1577
BstNI CCWGG 5 cut(s) 388, 428, 912, 1936, 2111
BstNSI RCATGY 3 cut(s) 1363, 1879, 2084
BstSCI CCNGG 6 cut(s) 386, 426, 910, 1934, 1972, 2109
BstSFI CTRYAG 2 cut(s) 1181, 1458
BstV1I GCAGC 4 cut(s) 1066, 2004, 2020, 2023
BstV2I GAAGAC 1 cut(s) 299
BstX2I RGATCY 4 cut(s) 659, 1283, 1944, 2105
BstYI RGATCY 4 cut(s) 659, 1283, 1944, 2105
BsuI GTATCC 2 cut(s) 1794, 2173
BsuRI GGCC 5 cut(s) 817, 910, 1511, 1657, 1934
BtsCI GGATG 5 cut(s) 76, 133, 1230, 1404, 1556
BtsI GCAGTG 1 cut(s) 1962
BtsIMutI CAGTG 1 cut(s) 1962
CaiI CAGNNNCTG 1 cut(s) 2036
CciI TCATGA 1 cut(s) 282
Cfr13I GGNCC 2 cut(s) 1655, 1867
Csp6I GTAC 5 cut(s) 1106, 1153, 1340, 1672, 1977
CviQI GTAC 5 cut(s) 1106, 1153, 1340, 1672, 1977
DdeI CTNAG 6 cut(s) 81, 857, 953, 1336, 1948, 1988
DraI TTTAAA 2 cut(s) 712, 1611
DrdI GACNNNNNNGTC 1 cut(s) 437
DseDI GACNNNNNNGTC 1 cut(s) 437
EaeI YGGCCR 1 cut(s) 1509
Eam1104I CTCTTC 2 cut(s) 796, 1743
EarI CTCTTC 2 cut(s) 796, 1743
Ecl136II GAGCTC 2 cut(s) 271, 1429
Eco147I AGGCCT 1 cut(s) 1934
Eco24I GRGCYC 3 cut(s) 273, 613, 1431
Eco32I GATATC 2 cut(s) 44, 737
Eco47I GGWCC 1 cut(s) 1867
Eco53kI GAGCTC 2 cut(s) 271, 1429
Eco57I CTGAAG 1 cut(s) 2013
EcoICRI GAGCTC 2 cut(s) 271, 1429
EcoRII CCWGG 5 cut(s) 386, 426, 910, 1934, 2109
EcoRV GATATC 2 cut(s) 44, 737
EcoT22I ATGCAT 1 cut(s) 163
EcoT38I GRGCYC 3 cut(s) 273, 613, 1431
FalI AAGNNNNNCTT 2 cut(s) 1899, 1931
FaqI GGGAC 2 cut(s) 2047, 2131
FauNDI CATATG 3 cut(s) 595, 905, 1243
FbaI TGATCA 1 cut(s) 1024
Fnu4HI GCNGC 4 cut(s) 1080, 1993, 2034, 2037
FokI GGATG 5 cut(s) 83, 140, 1237, 1411, 1543
FriOI GRGCYC 3 cut(s) 273, 613, 1431
Fsp4HI GCNGC 4 cut(s) 1080, 1993, 2034, 2037
GluI GCNGC 4 cut(s) 1080, 1993, 2034, 2037
GsuI CTGGAG 2 cut(s) 933, 1278
HaeIII GGCC 5 cut(s) 817, 910, 1511, 1657, 1934
HapII CCGG 2 cut(s) 485, 1974
HincII GTYRAC 1 cut(s) 679
HindII GTYRAC 1 cut(s) 679
HindIII AAGCTT 1 cut(s) 1913
HpaII CCGG 2 cut(s) 485, 1974
HphI GGTGA 1 cut(s) 737
Hpy166II GTNNAC 3 cut(s) 679, 778, 1168
Hpy188I TCNGA 8 cut(s) 33, 65, 619, 788, 800, 1138, 1944, 1951
Hpy188III TCNNGA 9 cut(s) 283, 516, 523, 838, 893, 931, 1522, 1617, 1710
Hpy8I GTNNAC 3 cut(s) 679, 778, 1168
HpyAV CCTTC 7 cut(s) 30, 58, 118, 146, 371, 861, 1901
HpyCH4III ACNGT 3 cut(s) 1185, 1594, 1684
HpyCH4IV ACGT 2 cut(s) 780, 1068
HpyF10VI GCNNNNNNNGC 5 cut(s) 277, 599, 608, 1018, 1577
HpyF3I CTNAG 6 cut(s) 81, 857, 953, 1336, 1948, 1988
HpySE526I ACGT 2 cut(s) 780, 1068
Ksp22I TGATCA 1 cut(s) 1024
LmnI GCTCC 5 cut(s) 268, 276, 544, 747, 1434
Lsp1109I GCAGC 4 cut(s) 1066, 2004, 2020, 2023
LweI GCATC 5 cut(s) 589, 1237, 1589, 1942, 2118
MaeII ACGT 2 cut(s) 780, 1068
MaeIII GTNAC 7 cut(s) 394, 846, 860, 1048, 1519, 1622, 1871
MflI RGATCY 4 cut(s) 659, 1283, 1944, 2105
MhlI GDGCHC 5 cut(s) 152, 273, 330, 613, 1431
MlsI TGGCCA 1 cut(s) 1511
MluNI TGGCCA 1 cut(s) 1511
MlyI GAGTC 3 cut(s) 28, 455, 854
MmeI TCCRAC 1 cut(s) 787
Mox20I TGGCCA 1 cut(s) 1511
Mph1103I ATGCAT 1 cut(s) 163
MroXI GAANNNNTTC 2 cut(s) 97, 1752
MscI TGGCCA 1 cut(s) 1511
MslI CAYNNNNRTG 3 cut(s) 118, 1325, 1728
Msp20I TGGCCA 1 cut(s) 1511
MspA1I CMGCKG 2 cut(s) 2033, 2125
MspI CCGG 2 cut(s) 485, 1974
MspR9I CCNGG 6 cut(s) 388, 428, 912, 1936, 1974, 2111
Mva1269I GAATGC 1 cut(s) 877
MvaI CCWGG 5 cut(s) 388, 428, 912, 1936, 2111
MwoI GCNNNNNNNGC 5 cut(s) 277, 599, 608, 1018, 1577
NciI CCSGG 1 cut(s) 1974
NdeI CATATG 3 cut(s) 595, 905, 1243
NlaIV GGNNCC 4 cut(s) 546, 661, 981, 1377
NmuCI GTSAC 4 cut(s) 394, 846, 1519, 1871
NsiI ATGCAT 1 cut(s) 163
NspI RCATGY 3 cut(s) 1363, 1879, 2084
NspV TTCGAA 1 cut(s) 1074
PagI TCATGA 1 cut(s) 282
PasI CCCWGGG 1 cut(s) 2110
PceI AGGCCT 1 cut(s) 1934
PciI ACATGT 2 cut(s) 1359, 1875
PcsI WCGNNNNNNNCGW 1 cut(s) 1274
PctI GAATGC 1 cut(s) 877
PdmI GAANNNNTTC 2 cut(s) 97, 1752
PfeI GAWTC 8 cut(s) 519, 585, 694, 1133, 1332, 1700, 1753, 2201
PkrI GCNGC 4 cut(s) 1081, 1994, 2035, 2038
PleI GAGTC 3 cut(s) 28, 454, 853
PpsI GAGTC 3 cut(s) 28, 454, 853
PscI ACATGT 2 cut(s) 1359, 1875
PsiI TTATAA 2 cut(s) 1101, 2138
Psp124BI GAGCTC 2 cut(s) 273, 1431
Psp6I CCWGG 5 cut(s) 386, 426, 910, 1934, 2109
PspGI CCWGG 5 cut(s) 386, 426, 910, 1934, 2109
PspN4I GGNNCC 4 cut(s) 546, 661, 981, 1377
PspPI GGNCC 2 cut(s) 1655, 1867
PsrI GAACNNNNNNTAC 2 cut(s) 1033, 1065
PstNI CAGNNNCTG 1 cut(s) 2036
PsuI RGATCY 4 cut(s) 659, 1283, 1944, 2105
PvuII CAGCTG 2 cut(s) 2033, 2125
RsaI GTAC 5 cut(s) 1107, 1154, 1341, 1673, 1978
RsaNI GTAC 5 cut(s) 1106, 1153, 1340, 1672, 1977
RseI CAYNNNNRTG 3 cut(s) 118, 1325, 1728
SacI GAGCTC 2 cut(s) 273, 1431
SatI GCNGC 4 cut(s) 1080, 1993, 2034, 2037
Sau96I GGNCC 2 cut(s) 1655, 1867
SchI GAGTC 3 cut(s) 28, 455, 854
ScrFI CCNGG 6 cut(s) 388, 428, 912, 1936, 1974, 2111
SduI GDGCHC 5 cut(s) 152, 273, 330, 613, 1431
SfaNI GCATC 5 cut(s) 589, 1237, 1589, 1942, 2118
SfcI CTRYAG 2 cut(s) 1181, 1458
SfuI TTCGAA 1 cut(s) 1074
SinI GGWCC 1 cut(s) 1867
SmiMI CAYNNNNRTG 3 cut(s) 118, 1325, 1728
SmlI CTYRAG 1 cut(s) 1615
SmoI CTYRAG 1 cut(s) 1615
SpeI ACTAGT 2 cut(s) 404, 1403
SseBI AGGCCT 1 cut(s) 1934
SstI GAGCTC 2 cut(s) 273, 1431
StuI AGGCCT 1 cut(s) 1934
StyD4I CCNGG 6 cut(s) 386, 426, 910, 1934, 1972, 2109
TaaI ACNGT 3 cut(s) 1185, 1594, 1684
TaiI ACGT 2 cut(s) 783, 1071
TaqI TCGA 4 cut(s) 1074, 1425, 1746, 1880
TatI WGTACW 2 cut(s) 1105, 1671
TfiI GAWTC 8 cut(s) 519, 585, 694, 1133, 1332, 1700, 1753, 2201
TscAI CASTG 1 cut(s) 1962
TseFI GTSAC 4 cut(s) 394, 846, 1519, 1871
TseI GCWGC 4 cut(s) 1079, 1992, 2033, 2036
Tsp45I GTSAC 4 cut(s) 394, 846, 1519, 1871
TspDTI ATGAA 9 cut(s) 43, 87, 207, 425, 837, 1362, 2044, 2190, 2193
TspGWI ACGGA 2 cut(s) 1357, 1859
TspRI CASTG 1 cut(s) 1962
VpaK11BI GGWCC 1 cut(s) 1867
XapI RAATTY 5 cut(s) 412, 530, 1468, 1606, 1893
XceI RCATGY 3 cut(s) 1363, 1879, 2084
XcmI CCANNNNNNNNNTGG 1 cut(s) 889
XmnI GAANNNNTTC 2 cut(s) 97, 1752
Zsp2I ATGCAT 1 cut(s) 163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.