Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Contig00640

Orthogroup ID

OG0000294

Physical Location & Seq

Genomic Coordinates Reverse (-)

21380 .. 24625

Gene Structure 3246 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw0G014260.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2229 bp

ATGTCTCTTTCTCCTGCTCGGACTGACAATAGATATTCCTTCTTTGTTGAGATCATGCGTGCTGATGTAGCGACTGAAGTTAAGGGAATTAGTGCCCTTATTGAAGTTTTCAAATGGAGGGAAGTTATCCTTTTAGATGATAGCAAAGAATATGAGAGAGGCTTCATTCCATCATTAGTCAACTCCTTGCAAGAGACCACACATGGGAGTGTTGCGTACAAAAGTTCCAATATTGCTTCCTCCTCATCAAATGAAGAAATCACTGCAGAGCTCCAAAAGTTGATCAACCTGAAGGTTAAGGTATTTGTGGTGCATGTTTCACATTTTTTTGCGCCTCGTCTTTTCTTGAATGCAAAGAAGTTAGGGATGATGAGCGAAGGGTATGCTTGGATCATGACATCAACTAGCATGAATTTTTTGCATTCTATGAATTTATCTGTTATTGAATCAATGCAAGGAGTGCTGGGTTTCAAGTCTTCTATTCCACCATCAGTGAGACTTCACAGTCTTACTTCAAGATTGAGGAGGAAGTTTAACCTGGAGGATCCCAATATGGAAGCAATTCGGGAGTTGAGTGCAGATGAAATCTGGGCATATGATGCAACTTGGGCTCTAGCAGAAGCAGTTGAAAGAGCAAGGCTTAAAAATTCTACAACTAAATCCTCCAAAGATGGAGCTGTGCTTCTTAAAGAGATATTGCAGATTGGATTTAAGGGTTTAAGTGGTGAGATTCAATATGTAGATGGGAGACTTATTCCATCAGAACCATTTGAGATAGTTAATGTTATTGGACAAGGTGATGTCAAACGAATTGGATTTTGGCCTTGCAAAGAAAAAGCAAAAACGAAGAAAGGGTCATCTCAGCAGCAGCTTAATCATAATGAGGGAAATTTAGCTTCCACGATTGATCTTGAAAGAATCATATGGCCTGGTGGTTCCAGGAGGAAACTGAGTAGTAGTGAAACACTTAAACTAAAAATTGGTGTTCCAGTGAAATATGGTTTCAAAGAACTTGTTCGTGTTGAGAAGGATCTTGAAACCAATAGAACTCTTGTTACTGGGTTCGCTATTGATGTATTCGAAGCTGCAGTACGAGGTTTGCCGTATGAAGATGAATTGCAGTACGAGTTTATTCCATTTGAGGATGCCAATGGAAATTCTGCTGGGCATTACAATGATCTTGTTTACCAGGTTTATCTCAAGAAATACGATGCTGTTGTTGGAGATGTTACGATCACAGAGAACAGATCTCAATATGTTGATTTTACAATACCATATACTGACTTGGGTGTGGGAACGTTGGTACCAAATGCCAAGGAAAACTTGTGGATTTTTTTTAAACCACTTTCAACATGTCTTTGGATAGCAAGTGCTGCTTTCTTTATCCTAACCAGTTTCGTTGTTTGGATCATTGAGCGTCCTACTAACAAAGAATTCCACTGCACAGTAAAGGAACAAATTGGAAAGCTTTTCTGGTTTTCCTTTTCTACCCTGGTGTTTGCTTATACGGAGAAGTTGTCAAATAATTTGGCAAAGTTTGTAGTGATCATATGGGTGTTTGTAGTGCTTATATTGACGTCGAGTTATACTGCAACTTTAGCATCAATGATGACAGTGAAACAGATACAGTTAAACTCAAGAGGAAACTATATAGGTTACCAATTGGGTTCCTTAGGAGTTATAGTGAACTTGAACTTCCAAGAGCTTAAGTCATATCGTTCATGTGAGGAGTATCTTAATGCTCTATCAAAAGGAAGCAAGAATGGTGGTGTTTCTGGGATTATTGATGAGGTTCCGTACATCAATATCTTCCTTGCAAAGTATTCTGCTGACTACTCGATGATTAAAACTAGGTCTATCACCAATGGTTTTGCCTTTGTTTTCCCTAAAGGTTCGAAATTGGTTCAAGATGTGTCACGGCAAATTGAACGACTGAGACAGGAAGGAAAGCTTATAGAGATGGAAAATACCTGGTTTCGTGAGAAAACAAGTCTCATGTCTGATGAGGATATAATCCAGAGTGATACCAATACGATTGACCTCTATGACTTTCGTGGTCTGTTCCTTCTTAGTGGGGCTTCTTTAGCTATTTCTCTTTTCTTATTCGTAGTTTTATCCACTAGATTTAGAAATCTGTTTCGAGGACTAATGCAGCTGATTCGTATAGATCTGCAGCCTTTAAGGACGTTCTTCGATCTCCTACATAGTATTCCATTGCAATGGAACTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005267 GO:0005272 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006816 GO:0006873 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015077 GO:0015079 GO:0015081 GO:0015085 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0019722 GO:0019725 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0030003 GO:0033993 GO:0034220 GO:0035556 GO:0035725 GO:0038023 GO:0042221 GO:0042592 GO:0043200 GO:0044464 GO:0046873 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055080 GO:0055082 GO:0055085 GO:0060089 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071804 GO:0071805 GO:0071944 GO:0072511 GO:0097305 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

742

Amino Acids

84.14

Weight (kDa)

8.3

Isoelectric Point (pI)

33.41

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANF_receptor	PF01094	8 - 264	2.9e-41	Receptor family ligand binding region
Lig_chan-Glu_bd	PF10613	342 - 436	1.9e-09	Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3	PF00497	391 - 660	3.5e-12	Bacterial extracellular solute-binding proteins, family 3
Lig_chan	PF00060	452 - 693	2.2e-24	Ligand-gated ion channel

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0000294)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca	FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica	MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica	Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis	pycom02g20100 pycom07g06420
rosa_chinensis	RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata	RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora	Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii	Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa	Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha	Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana	Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	504
AatII	GACGTC	1 cut(s)	1580
Acc65I	GGTACC	1 cut(s)	1303
AccB1I	GGYRCC	1 cut(s)	1303
AclI	AACGTT	1 cut(s)	1298
AclWI	GGATC	5 cut(s)	398, 539, 552, 1038, 1415
AcsI	RAATTY	6 cut(s)	412, 430, 646, 889, 1156, 1433
AcuI	CTGAAG	2 cut(s)	96, 311
AcyI	GRCGYC	1 cut(s)	1577
AfaI	GTAC	5 cut(s)	218, 1092, 1124, 1305, 1799
AfiI	CCNNNNNNNGG	1 cut(s)	204
AflII	CTTAAG	1 cut(s)	1706
AflIII	ACRYGT	1 cut(s)	1352
AjnI	CCWGG	6 cut(s)	537, 928, 938, 1188, 1491, 1970
AjuI	GAANNNNNNNTTGG	2 cut(s)	802, 834
Alw21I	GWGCWC	1 cut(s)	273
Alw26I	GTCTC	6 cut(s)	9, 188, 490, 742, 1930, 1997
AlwI	GGATC	5 cut(s)	398, 539, 552, 1038, 1415
AoxI	GGCC	2 cut(s)	821, 926
ApeKI	GCWGC	6 cut(s)	865, 868, 1085, 1373, 2152, 2173
ApoI	RAATTY	6 cut(s)	412, 430, 646, 889, 1156, 1433
ArsI	GACNNNNNNTTYG	2 cut(s)	839, 871
Asp700I	GAANNNNTTC	2 cut(s)	561, 1014
Asp718I	GGTACC	1 cut(s)	1303
AspLEI	GCGC	1 cut(s)	334
AsuHPI	GGTGA	3 cut(s)	737, 809, 1852
AsuII	TTCGAA	2 cut(s)	1080, 1895
AxyI	CCTNAGG	1 cut(s)	1672
BaeGI	GKGCMC	1 cut(s)	97
BaeI	ACNNNNGTAYC	2 cut(s)	1287, 1320
BamHI	GGATCC	1 cut(s)	544
BanI	GGYRCC	1 cut(s)	1303
BanII	GRGCYC	2 cut(s)	273, 613
BarI	GAAGNNNNNNTAC	2 cut(s)	1074, 1106
BbsI	GAAGAC	1 cut(s)	468
Bbv12I	GWGCWC	1 cut(s)	273
BbvI	GCAGC	6 cut(s)	877, 880, 1072, 1360, 2164, 2185
BccI	CCATC	6 cut(s)	178, 496, 665, 737, 766, 1954
BceAI	ACGGC	2 cut(s)	1087, 1934
BcgI	CGANNNNNNTGC	4 cut(s)	365, 399, 2141, 2175
BciT130I	CCWGG	6 cut(s)	539, 930, 940, 1190, 1493, 1972
BclI	TGATCA	2 cut(s)	282, 1545
BcoDI	GTCTC	6 cut(s)	9, 188, 490, 742, 1930, 1997
BfaI	CTAG	4 cut(s)	405, 614, 1851, 2121
BfmI	CTRYAG	3 cut(s)	264, 1086, 2171
BfrI	CTTAAG	1 cut(s)	1706
BglII	AGATCT	2 cut(s)	1247, 2167
BisI	GCNGC	6 cut(s)	866, 869, 1086, 1374, 2153, 2174
BlsI	GCNGC	6 cut(s)	867, 870, 1087, 1375, 2154, 2175
Bme1390I	CCNGG	6 cut(s)	539, 930, 940, 1190, 1493, 1972
BmiI	GGNNCC	5 cut(s)	546, 937, 1305, 1669, 1794
BmrFI	CCNGG	6 cut(s)	539, 930, 940, 1190, 1493, 1972
BmrI	ACTGGG	1 cut(s)	1068
BmsI	GCATC	4 cut(s)	589, 1135, 1201, 1610
BmuI	ACTGGG	1 cut(s)	1068
BpiI	GAAGAC	1 cut(s)	468
BpmI	CTGGAG	1 cut(s)	560
Bpu14I	TTCGAA	2 cut(s)	1080, 1895
BpuEI	CTTGAG	2 cut(s)	1184, 1621
BsaHI	GRCGYC	1 cut(s)	1577
BsaI	GGTCTC	1 cut(s)	188
BsaJI	CCNNGG	2 cut(s)	1314, 1491
BsaXI	ACNNNNNCTCC	4 cut(s)	1502, 1532, 1668, 1698
Bsc4I	CCNNNNNNNGG	1 cut(s)	204
Bse1I	ACTGG	3 cut(s)	989, 1063, 1392
Bse21I	CCTNAGG	1 cut(s)	1672
Bse3DI	GCAATG	2 cut(s)	2213, 2225
BseBI	CCWGG	6 cut(s)	539, 930, 940, 1190, 1493, 1972
BseDI	CCNNGG	2 cut(s)	1314, 1491
BseGI	GGATG	2 cut(s)	372, 1150
BseLI	CCNNNNNNNGG	1 cut(s)	204
BseMI	GCAATG	2 cut(s)	2213, 2225
BseMII	CTCAG	3 cut(s)	875, 941, 1925
BseNI	ACTGG	3 cut(s)	989, 1063, 1392
BseRI	GAGGAG	3 cut(s)	232, 538, 1742
BseSI	GKGCMC	1 cut(s)	97
BseXI	GCAGC	6 cut(s)	877, 880, 1072, 1360, 2164, 2185
BseYI	CCCAGC	2 cut(s)	463, 1163
BsgI	GTGCAG	2 cut(s)	597, 1426
BshFI	GGCC	2 cut(s)	823, 928
BshNI	GGYRCC	1 cut(s)	1303
BsiHKAI	GWGCWC	1 cut(s)	273
BslI	CCNNNNNNNGG	1 cut(s)	204
BsmAI	GTCTC	6 cut(s)	9, 188, 490, 742, 1930, 1997
BsmI	GAATGC	2 cut(s)	355, 421
BsnI	GGCC	2 cut(s)	823, 928
Bso31I	GGTCTC	1 cut(s)	188
Bsp119I	TTCGAA	2 cut(s)	1080, 1895
Bsp1286I	GDGCHC	3 cut(s)	97, 273, 613
BspANI	GGCC	2 cut(s)	823, 928
BspCNI	CTCAG	3 cut(s)	874, 942, 1926
BspHI	TCATGA	1 cut(s)	393
BspLI	GGNNCC	5 cut(s)	546, 937, 1305, 1669, 1794
BspMAI	CTGCAG	3 cut(s)	268, 1090, 2175
BspPI	GGATC	5 cut(s)	398, 539, 552, 1038, 1415
BspT104I	TTCGAA	2 cut(s)	1080, 1895
BspT107I	GGYRCC	1 cut(s)	1303
BspTI	CTTAAG	1 cut(s)	1706
BspTNI	GGTCTC	1 cut(s)	188
BsrDI	GCAATG	2 cut(s)	2213, 2225
BsrI	ACTGG	3 cut(s)	989, 1063, 1392
BssECI	CCNNGG	2 cut(s)	1314, 1491
BssNI	GRCGYC	1 cut(s)	1577
BssT1I	CCWWGG	1 cut(s)	1314
Bst2UI	CCWGG	6 cut(s)	539, 930, 940, 1190, 1493, 1972
Bst4CI	ACNGT	4 cut(s)	506, 1447, 1615, 1629
BstACI	GRCGYC	1 cut(s)	1577
BstAFI	CTTAAG	1 cut(s)	1706
BstAPI	GCANNNNNTGC	3 cut(s)	460, 599, 1373
BstBI	TTCGAA	2 cut(s)	1080, 1895
BstC8I	GCNNGC	1 cut(s)	60
BstDEI	CTNAG	5 cut(s)	861, 950, 1672, 1934, 2069
BstEII	GGTNACC	1 cut(s)	1655
BstF5I	GGATG	2 cut(s)	372, 1150
BstHHI	GCGC	1 cut(s)	334
BstMAI	GTCTC	6 cut(s)	9, 188, 490, 742, 1930, 1997
BstMWI	GCNNNNNNNGC	7 cut(s)	68, 460, 599, 608, 1373, 1598, 2084
BstNI	CCWGG	6 cut(s)	539, 930, 940, 1190, 1493, 1972
BstNSI	RCATGY	2 cut(s)	317, 1356
BstPI	GGTNACC	1 cut(s)	1655
BstSCI	CCNGG	6 cut(s)	537, 928, 938, 1188, 1491, 1970
BstSFI	CTRYAG	3 cut(s)	264, 1086, 2171
BstSLI	GKGCMC	1 cut(s)	97
BstV1I	GCAGC	6 cut(s)	877, 880, 1072, 1360, 2164, 2185
BstV2I	GAAGAC	1 cut(s)	468
BstX2I	RGATCY	4 cut(s)	544, 1030, 1247, 2167
BstXI	CCANNNNNNTGG	1 cut(s)	2220
BstYI	RGATCY	4 cut(s)	544, 1030, 1247, 2167
Bsu36I	CCTNAGG	1 cut(s)	1672
BsuRI	GGCC	2 cut(s)	823, 928
BtsCI	GGATG	2 cut(s)	372, 1150
BtsI	GCAGTG	2 cut(s)	261, 1438
BtsIMutI	CAGTG	5 cut(s)	261, 498, 996, 1438, 1620
Cac8I	GCNNGC	1 cut(s)	60
CciI	TCATGA	1 cut(s)	393
CfoI	GCGC	1 cut(s)	334
CseI	GACGC	1 cut(s)	1406
CsiI	ACCWGGT	2 cut(s)	1188, 1970
Csp6I	GTAC	5 cut(s)	217, 1091, 1123, 1304, 1798
CspCI	CAANNNNNGTGG	2 cut(s)	1747, 1782
CviAII	CATG	8 cut(s)	55, 203, 314, 394, 409, 1353, 1722, 1996
CviQI	GTAC	5 cut(s)	217, 1091, 1123, 1304, 1798
DdeI	CTNAG	5 cut(s)	861, 950, 1672, 1934, 2069
DraI	TTTAAA	1 cut(s)	1339
DrdI	GACNNNNNNGTC	1 cut(s)	504
DseDI	GACNNNNNNGTC	1 cut(s)	504
Ecl136II	GAGCTC	1 cut(s)	271
Eco130I	CCWWGG	1 cut(s)	1314
Eco24I	GRGCYC	2 cut(s)	273, 613
Eco31I	GGTCTC	1 cut(s)	188
Eco53kI	GAGCTC	1 cut(s)	271
Eco57I	CTGAAG	2 cut(s)	96, 311
Eco81I	CCTNAGG	1 cut(s)	1672
Eco91I	GGTNACC	1 cut(s)	1655
EcoICRI	GAGCTC	1 cut(s)	271
EcoO65I	GGTNACC	1 cut(s)	1655
EcoRI	GAATTC	1 cut(s)	1433
EcoRII	CCWGG	6 cut(s)	537, 928, 938, 1188, 1491, 1970
EcoT14I	CCWWGG	1 cut(s)	1314
EcoT38I	GRGCYC	2 cut(s)	273, 613
ErhI	CCWWGG	1 cut(s)	1314
FaeI	CATG	8 cut(s)	58, 206, 317, 397, 412, 1356, 1725, 1999
FalI	AAGNNNNNCTT	8 cut(s)	114, 146, 1307, 1339, 1360, 1392, 1935, 1967
FatI	CATG	8 cut(s)	54, 202, 313, 393, 408, 1352, 1721, 1995
FauNDI	CATATG	3 cut(s)	595, 923, 1550
FbaI	TGATCA	2 cut(s)	282, 1545
Fnu4HI	GCNGC	6 cut(s)	866, 869, 1086, 1374, 2153, 2174
FokI	GGATG	2 cut(s)	379, 1157
FriOI	GRGCYC	2 cut(s)	273, 613
Fsp4HI	GCNGC	6 cut(s)	866, 869, 1086, 1374, 2153, 2174
FspBI	CTAG	4 cut(s)	405, 614, 1851, 2121
GlaI	GCGC	1 cut(s)	333
GluI	GCNGC	6 cut(s)	866, 869, 1086, 1374, 2153, 2174
GsaI	CCCAGC	2 cut(s)	467, 1167
GsuI	CTGGAG	1 cut(s)	560
HaeIII	GGCC	2 cut(s)	823, 928
HgaI	GACGC	1 cut(s)	1406
HhaI	GCGC	1 cut(s)	334
Hin1I	GRCGYC	1 cut(s)	1577
Hin1II	CATG	8 cut(s)	58, 206, 317, 397, 412, 1356, 1725, 1999
Hin6I	GCGC	1 cut(s)	332
HinP1I	GCGC	1 cut(s)	332
HincII	GTYRAC	1 cut(s)	181
HindII	GTYRAC	1 cut(s)	181
HindIII	AAGCTT	2 cut(s)	1466, 1949
HinfI	GANTC	4 cut(s)	446, 730, 918, 2158
HphI	GGTGA	3 cut(s)	737, 809, 1852
Hpy166II	GTNNAC	3 cut(s)	181, 1186, 1687
Hpy188I	TCNGA	3 cut(s)	21, 763, 2002
Hpy8I	GTNNAC	3 cut(s)	181, 1186, 1687
Hpy99I	CGWCG	1 cut(s)	1582
HpyAV	CCTTC	6 cut(s)	49, 286, 371, 1021, 1937, 2075
HpyCH4III	ACNGT	4 cut(s)	506, 1447, 1615, 1629
HpyCH4IV	ACGT	3 cut(s)	1298, 1577, 2186
HpyF10VI	GCNNNNNNNGC	7 cut(s)	68, 460, 599, 608, 1373, 1598, 2084
HpyF3I	CTNAG	5 cut(s)	861, 950, 1672, 1934, 2069
HpySE526I	ACGT	3 cut(s)	1298, 1577, 2186
Hsp92I	GRCGYC	1 cut(s)	1577
Hsp92II	CATG	8 cut(s)	58, 206, 317, 397, 412, 1356, 1725, 1999
HspAI	GCGC	1 cut(s)	332
KpnI	GGTACC	1 cut(s)	1307
Ksp22I	TGATCA	2 cut(s)	282, 1545
LmnI	GCTCC	2 cut(s)	276, 674
Lsp1109I	GCAGC	6 cut(s)	877, 880, 1072, 1360, 2164, 2185
LweI	GCATC	4 cut(s)	589, 1135, 1201, 1610
MabI	ACCWGGT	2 cut(s)	1188, 1970
MaeI	CTAG	4 cut(s)	405, 614, 1851, 2121
MaeII	ACGT	3 cut(s)	1298, 1577, 2186
MaeIII	GTNAC	4 cut(s)	1054, 1228, 1655, 1914
MboII	GAAGA	6 cut(s)	266, 468, 859, 1121, 1801, 2182
MfeI	CAATTG	1 cut(s)	1661
MflI	RGATCY	4 cut(s)	544, 1030, 1247, 2167
MhlI	GDGCHC	3 cut(s)	97, 273, 613
MmeI	TCCRAC	1 cut(s)	1201
MroXI	GAANNNNTTC	2 cut(s)	561, 1014
MslI	CAYNNNNRTG	4 cut(s)	207, 1173, 1553, 2218
MspA1I	CMGCKG	1 cut(s)	2155
MspCI	CTTAAG	1 cut(s)	1706
MspR9I	CCNGG	6 cut(s)	539, 930, 940, 1190, 1493, 1972
MunI	CAATTG	1 cut(s)	1661
Mva1269I	GAATGC	2 cut(s)	355, 421
MvaI	CCWGG	6 cut(s)	539, 930, 940, 1190, 1493, 1972
MwoI	GCNNNNNNNGC	7 cut(s)	68, 460, 599, 608, 1373, 1598, 2084
NdeI	CATATG	3 cut(s)	595, 923, 1550
NlaIII	CATG	8 cut(s)	58, 206, 317, 397, 412, 1356, 1725, 1999
NlaIV	GGNNCC	5 cut(s)	546, 937, 1305, 1669, 1794
NmuCI	GTSAC	1 cut(s)	1914
NspI	RCATGY	2 cut(s)	317, 1356
NspV	TTCGAA	2 cut(s)	1080, 1895
PagI	TCATGA	1 cut(s)	393
PciI	ACATGT	1 cut(s)	1352
PctI	GAATGC	2 cut(s)	355, 421
PdmI	GAANNNNTTC	2 cut(s)	561, 1014
PfeI	GAWTC	4 cut(s)	446, 730, 918, 2158
PfoI	TCCNGGA	1 cut(s)	938
PkrI	GCNGC	6 cut(s)	867, 870, 1087, 1375, 2154, 2175
PscI	ACATGT	1 cut(s)	1352
Psp124BI	GAGCTC	1 cut(s)	273
Psp1406I	AACGTT	1 cut(s)	1298
Psp6I	CCWGG	6 cut(s)	537, 928, 938, 1188, 1491, 1970
PspEI	GGTNACC	1 cut(s)	1655
PspFI	CCCAGC	2 cut(s)	463, 1163
PspGI	CCWGG	6 cut(s)	537, 928, 938, 1188, 1491, 1970
PspN4I	GGNNCC	5 cut(s)	546, 937, 1305, 1669, 1794
PsrI	GAACNNNNNNTAC	2 cut(s)	1039, 1071
PstI	CTGCAG	3 cut(s)	268, 1090, 2175
PsuI	RGATCY	4 cut(s)	544, 1030, 1247, 2167
PvuII	CAGCTG	1 cut(s)	2155
RsaI	GTAC	5 cut(s)	218, 1092, 1124, 1305, 1799
RsaNI	GTAC	5 cut(s)	217, 1091, 1123, 1304, 1798
RseI	CAYNNNNRTG	4 cut(s)	207, 1173, 1553, 2218
SacI	GAGCTC	1 cut(s)	273
SatI	GCNGC	6 cut(s)	866, 869, 1086, 1374, 2153, 2174
ScrFI	CCNGG	6 cut(s)	539, 930, 940, 1190, 1493, 1972
SduI	GDGCHC	3 cut(s)	97, 273, 613
SexAI	ACCWGGT	2 cut(s)	1188, 1970
SfaNI	GCATC	4 cut(s)	589, 1135, 1201, 1610
SfcI	CTRYAG	3 cut(s)	264, 1086, 2171
SfuI	TTCGAA	2 cut(s)	1080, 1895
SmiMI	CAYNNNNRTG	4 cut(s)	207, 1173, 1553, 2218
SmlI	CTYRAG	3 cut(s)	1199, 1636, 1706
SmoI	CTYRAG	3 cut(s)	1199, 1636, 1706
SspI	AATATT	1 cut(s)	232
SspMI	CTAG	4 cut(s)	405, 614, 1851, 2121
SstI	GAGCTC	1 cut(s)	273
StyD4I	CCNGG	6 cut(s)	537, 928, 938, 1188, 1491, 1970
StyI	CCWWGG	1 cut(s)	1314
TaaI	ACNGT	4 cut(s)	506, 1447, 1615, 1629
TaiI	ACGT	3 cut(s)	1301, 1580, 2189
TaqI	TCGA	6 cut(s)	1080, 1580, 1838, 1895, 2140, 2193
TfiI	GAWTC	4 cut(s)	446, 730, 918, 2158
TscAI	CASTG	5 cut(s)	268, 498, 996, 1445, 1620
TseFI	GTSAC	1 cut(s)	1914
TseI	GCWGC	6 cut(s)	865, 868, 1085, 1373, 2152, 2173
Tsp45I	GTSAC	1 cut(s)	1914
TspDTI	ATGAA	8 cut(s)	154, 267, 425, 443, 597, 1122, 1128, 1710
TspGWI	ACGGA	2 cut(s)	1523, 1785
TspRI	CASTG	5 cut(s)	268, 498, 996, 1445, 1620
Vha464I	CTTAAG	1 cut(s)	1706
XapI	RAATTY	6 cut(s)	412, 430, 646, 889, 1156, 1433
XceI	RCATGY	2 cut(s)	317, 1356
XmnI	GAANNNNTTC	2 cut(s)	561, 1014
XspI	CTAG	4 cut(s)	405, 614, 1851, 2121
ZraI	GACGTC	1 cut(s)	1578

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.