Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp02

Orthogroup ID

OG0000294

Physical Location & Seq

Genomic Coordinates Forward (+)

16397830 .. 16399308

Gene Structure 1479 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.2G105800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1125 bp

ATGAAAAGTTCCAAAAGGCGATTGAGTAATGAAATAAAATTGAGAATTGGTGCTCCTGTGAAATTGGGATTCAAGGAACTCGTAGGTGTGCACCATGATCTTCAAACCAACAAAACTTATGTCACTGGCTTTTTTGTCGGAGATACGACAAACACATGGAACAGATCTTTATATGTTGATTTTACTGTACCATTCACTGACTTAGGCATGGGAACTTTGGTGCCGAAAGAACAGGAAACAATGTGGATCTTCTTGAAACCTCTTTCAGCAGATTTGTGGATAACAAATGCTGGTTTCTTTATTCTGACGGGTTTTGTTGTGTGGTTAATTGAGAAGCCAGTTAACCAAGAATTCCAAGGCTCACCATCGCAACAAATTGGAACAATATTTTGGTTCTCCTTGTCAACCCTTGTGTTTGCTCATAGTAAGCACTTGATCTCATTGCTTAGAATGATGCATGTTTTTCCTACCAAGGAGAAGTTGTTGAACAACTCGGCAAAGTTTGTAGTGATCATATGGGTGTGTGTAGTGCTTATATTGAATTCCAGTTACACTGCCACTTTAACTTCAATGATGACAGTAAAACAGATACAGTTGAACTCAAAACTGGACTATGTAGGTTACCAAATTGGTACATTCTCCAAATTAGGACGGACAGACTTCGATTTTAAGGGACTCGAGCAATTTAACCAGTCAGAAGAAGCATATATTGATGCTTTGTCCAGAGGAAATAAGCCTGATCTTCCTAGCAAAGTATTCCTCAAGTACTCCATGATTAATACCAAGTCTACCACCAATGGTTTTGGCTTTGTTTTCCCTAGAGGTTCCAAGTTGGCACAAGACATGTCAAGGCAAATTGAAATTCTCAGAGAAGAAGGAAAGCTTTTAGAGATGGAAGATGCGTGGTTCCATAGTAAATCAAATCTTCTGTTCGACGACAAAACGAGTGATCCAAGTGCTCTGAACTTCCACGATTTTCGTGGTTTATTCCTTGTAAGTGGGGTTTCTTCAGCTTTTGCTCCTCTTATTCACAGTTTTCTTACTGAAAGAGAAATATTGGCACGTCGTGAAGAAGAAATATTGGCAGCACGTAAGAAAGGTCCTCTCCAAAAAGGTATTCGATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004888 GO:0005215 GO:0005216 GO:0005261 GO:0005262 GO:0005267 GO:0005272 GO:0005575 GO:0005623 GO:0005886 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006814 GO:0006816 GO:0006873 GO:0007154 GO:0007165 GO:0008066 GO:0008150 GO:0008324 GO:0009719 GO:0009725 GO:0009737 GO:0009987 GO:0010033 GO:0010243 GO:0015075 GO:0015077 GO:0015079 GO:0015081 GO:0015085 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0019722 GO:0019725 GO:0019932 GO:0022803 GO:0022838 GO:0022857 GO:0022890 GO:0023052 GO:0030001 GO:0030003 GO:0033993 GO:0034220 GO:0035556 GO:0035725 GO:0038023 GO:0042221 GO:0042592 GO:0043200 GO:0044464 GO:0046873 GO:0048878 GO:0050789 GO:0050794 GO:0050801 GO:0050896 GO:0051179 GO:0051234 GO:0051716 GO:0055080 GO:0055082 GO:0055085 GO:0060089 GO:0065007 GO:0065008 GO:0070588 GO:0070838 GO:0070887 GO:0071229 GO:0071230 GO:0071310 GO:0071417 GO:0071495 GO:0071804 GO:0071805 GO:0071944 GO:0072511 GO:0097305 GO:0098655 GO:0098660 GO:0098662 GO:1901698 GO:1901699 GO:1901700 GO:1901701

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

ANF_receptor Lig_chan SBP_bac_3

Protein Analysis

375

Amino Acids

42.55

Weight (kDa)

9.34

Isoelectric Point (pI)

37.29

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000294)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca	FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica	MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica	Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis	pycom02g20100 pycom07g06420
rosa_chinensis	RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata	RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora	Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii	Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa	Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha	Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana	Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	220
AccI	GTMKAC	1 cut(s)	788
AclWI	GGATC	2 cut(s)	254, 944
AcsI	RAATTY	3 cut(s)	350, 541, 861
AcuI	CTGAAG	1 cut(s)	993
AdeI	CACNNNGTG	1 cut(s)	1067
AfaI	GTAC	3 cut(s)	189, 634, 767
AflIII	ACRYGT	1 cut(s)	843
AgsI	TTSAA	8 cut(s)	73, 104, 256, 487, 541, 570, 598, 860
AjiI	CACGTC	1 cut(s)	1064
AjuI	GAANNNNNNNTTGG	3 cut(s)	373, 405, 1101
AluBI	AGCT	2 cut(s)	883, 1013
AluI	AGCT	2 cut(s)	883, 1013
Alw21I	GWGCWC	3 cut(s)	55, 93, 961
Alw44I	GTGCAC	1 cut(s)	89
AlwI	GGATC	2 cut(s)	254, 944
Ama87I	CYCGRG	1 cut(s)	677
ApaLI	GTGCAC	1 cut(s)	89
ApeKI	GCWGC	1 cut(s)	1085
ApoI	RAATTY	3 cut(s)	350, 541, 861
ArsI	GACNNNNNNTTYG	2 cut(s)	105, 137
AseI	ATTAAT	1 cut(s)	777
AspS9I	GGNCC	1 cut(s)	1100
AsuHPI	GGTGA	1 cut(s)	354
AvaI	CYCGRG	1 cut(s)	677
AvaII	GGWCC	1 cut(s)	1100
BaeGI	GKGCMC	1 cut(s)	93
BanI	GGYRCC	1 cut(s)	220
Bbv12I	GWGCWC	3 cut(s)	55, 93, 961
BbvI	GCAGC	1 cut(s)	1097
BccI	CCATC	2 cut(s)	373, 886
BclI	TGATCA	1 cut(s)	510
BfaI	CTAG	2 cut(s)	747, 819
BglII	AGATCT	1 cut(s)	164
BisI	GCNGC	1 cut(s)	1086
BlsI	GCNGC	1 cut(s)	1087
BmcAI	AGTACT	1 cut(s)	767
Bme18I	GGWCC	1 cut(s)	1100
BmeT110I	CYCGRG	1 cut(s)	677
BmgBI	CACGTC	1 cut(s)	1064
BmgT120I	GGNCC	1 cut(s)	1100
BmiI	GGNNCC	3 cut(s)	222, 826, 908
BmsI	GCATC	3 cut(s)	444, 703, 889
BpuEI	CTTGAG	1 cut(s)	746
BsaAI	YACGTR	1 cut(s)	1091
BsaJI	CCNNGG	2 cut(s)	355, 471
BsaXI	ACNNNNNCTCC	2 cut(s)	467, 497
Bse1I	ACTGG	5 cut(s)	130, 338, 546, 612, 691
Bse3DI	GCAATG	1 cut(s)	440
BseDI	CCNNGG	2 cut(s)	355, 471
BseMI	GCAATG	1 cut(s)	440
BseMII	CTCAG	1 cut(s)	880
BseNI	ACTGG	5 cut(s)	130, 338, 546, 612, 691
BseRI	GAGGAG	1 cut(s)	1011
BseSI	GKGCMC	1 cut(s)	93
BseXI	GCAGC	1 cut(s)	1097
BshNI	GGYRCC	1 cut(s)	220
BsiHKAI	GWGCWC	3 cut(s)	55, 93, 961
BsiHKCI	CYCGRG	1 cut(s)	677
BslFI	GGGAC	1 cut(s)	687
BsmFI	GGGAC	1 cut(s)	687
BsoBI	CYCGRG	1 cut(s)	677
Bsp1286I	GDGCHC	3 cut(s)	55, 93, 961
Bsp143I	GATC	7 cut(s)	97, 164, 246, 435, 510, 739, 949
BspCNI	CTCAG	1 cut(s)	879
BspLI	GGNNCC	3 cut(s)	222, 826, 908
BspPI	GGATC	2 cut(s)	254, 944
BspT107I	GGYRCC	1 cut(s)	220
BsrDI	GCAATG	1 cut(s)	440
BsrI	ACTGG	5 cut(s)	130, 338, 546, 612, 691
BssECI	CCNNGG	2 cut(s)	355, 471
BssMI	GATC	7 cut(s)	97, 164, 246, 435, 510, 739, 949
BssT1I	CCWWGG	2 cut(s)	355, 471
Bst4CI	ACNGT	4 cut(s)	187, 580, 594, 1034
BstBAI	YACGTR	1 cut(s)	1091
BstDEI	CTNAG	3 cut(s)	202, 446, 866
BstEII	GGTNACC	1 cut(s)	620
BstKTI	GATC	7 cut(s)	100, 167, 249, 438, 513, 742, 952
BstMBI	GATC	7 cut(s)	97, 164, 246, 435, 510, 739, 949
BstNSI	RCATGY	2 cut(s)	461, 847
BstPI	GGTNACC	1 cut(s)	620
BstSLI	GKGCMC	1 cut(s)	93
BstV1I	GCAGC	1 cut(s)	1097
BstX2I	RGATCY	2 cut(s)	164, 246
BstYI	RGATCY	2 cut(s)	164, 246
BtgZI	GCGATG	1 cut(s)	351
BtrI	CACGTC	1 cut(s)	1064
BtsI	GCAGTG	1 cut(s)	552
BtsIMutI	CAGTG	3 cut(s)	123, 195, 552
Cfr13I	GGNCC	1 cut(s)	1100
Csp6I	GTAC	3 cut(s)	188, 633, 766
CviAII	CATG	6 cut(s)	95, 156, 208, 458, 772, 844
CviJI	RGCY	7 cut(s)	129, 337, 360, 736, 807, 883, 1013
CviKI_1	RGCY	7 cut(s)	129, 337, 360, 736, 807, 883, 1013
CviQI	GTAC	3 cut(s)	188, 633, 766
DdeI	CTNAG	3 cut(s)	202, 446, 866
DpnI	GATC	7 cut(s)	99, 166, 248, 437, 512, 741, 951
DpnII	GATC	7 cut(s)	97, 164, 246, 435, 510, 739, 949
DraIII	CACNNNGTG	1 cut(s)	1067
Eco130I	CCWWGG	2 cut(s)	355, 471
Eco47I	GGWCC	1 cut(s)	1100
Eco57I	CTGAAG	1 cut(s)	993
Eco88I	CYCGRG	1 cut(s)	677
Eco91I	GGTNACC	1 cut(s)	620
EcoO109I	RGGNCCY	1 cut(s)	1100
EcoO65I	GGTNACC	1 cut(s)	620
EcoRI	GAATTC	2 cut(s)	350, 541
EcoT14I	CCWWGG	2 cut(s)	355, 471
EcoT22I	ATGCAT	1 cut(s)	459
ErhI	CCWWGG	2 cut(s)	355, 471
FaeI	CATG	6 cut(s)	98, 159, 211, 461, 775, 847
FalI	AAGNNNNNCTT	2 cut(s)	867, 899
FaqI	GGGAC	1 cut(s)	687
FatI	CATG	6 cut(s)	94, 155, 207, 457, 771, 843
FauNDI	CATATG	1 cut(s)	515
FbaI	TGATCA	1 cut(s)	510
FblI	GTMKAC	1 cut(s)	788
Fnu4HI	GCNGC	1 cut(s)	1086
Fsp4HI	GCNGC	1 cut(s)	1086
FspBI	CTAG	2 cut(s)	747, 819
GluI	GCNGC	1 cut(s)	1086
Hin1II	CATG	6 cut(s)	98, 159, 211, 461, 775, 847
HincII	GTYRAC	2 cut(s)	343, 405
HindII	GTYRAC	2 cut(s)	343, 405
HindIII	AAGCTT	1 cut(s)	881
HinfI	GANTC	2 cut(s)	69, 675
HpaI	GTTAAC	1 cut(s)	343
HphI	GGTGA	1 cut(s)	354
Hpy166II	GTNNAC	4 cut(s)	91, 343, 405, 789
Hpy188I	TCNGA	5 cut(s)	140, 306, 697, 869, 963
Hpy188III	TCNNGA	3 cut(s)	253, 723, 1067
Hpy8I	GTNNAC	4 cut(s)	91, 343, 405, 789
Hpy99I	CGWCG	2 cut(s)	938, 1068
HpyAV	CCTTC	1 cut(s)	869
HpyCH4III	ACNGT	4 cut(s)	187, 580, 594, 1034
HpyCH4IV	ACGT	2 cut(s)	1063, 1090
HpyCH4V	TGCA	2 cut(s)	91, 457
HpyF3I	CTNAG	3 cut(s)	202, 446, 866
HpySE526I	ACGT	2 cut(s)	1063, 1090
Hsp92II	CATG	6 cut(s)	98, 159, 211, 461, 775, 847
Ksp22I	TGATCA	1 cut(s)	510
KspAI	GTTAAC	1 cut(s)	343
Kzo9I	GATC	7 cut(s)	97, 164, 246, 435, 510, 739, 949
LmnI	GCTCC	2 cut(s)	58, 1024
Lsp1109I	GCAGC	1 cut(s)	1097
LweI	GCATC	3 cut(s)	444, 703, 889
MaeI	CTAG	2 cut(s)	747, 819
MaeII	ACGT	2 cut(s)	1063, 1090
MaeIII	GTNAC	3 cut(s)	121, 548, 620
MalI	GATC	7 cut(s)	99, 166, 248, 437, 512, 741, 951
MboI	GATC	7 cut(s)	97, 164, 246, 435, 510, 739, 949
MflI	RGATCY	2 cut(s)	164, 246
MhlI	GDGCHC	3 cut(s)	55, 93, 961
MlyI	GAGTC	1 cut(s)	669
MmeI	TCCRAC	1 cut(s)	118
MnlI	CCTC	6 cut(s)	270, 719, 770, 815, 1032, 1113
Mph1103I	ATGCAT	1 cut(s)	459
MseI	TTAA	6 cut(s)	326, 342, 563, 669, 687, 777
MslI	CAYNNNNRTG	1 cut(s)	518
NdeI	CATATG	1 cut(s)	515
NdeII	GATC	7 cut(s)	97, 164, 246, 435, 510, 739, 949
NlaIII	CATG	6 cut(s)	98, 159, 211, 461, 775, 847
NlaIV	GGNNCC	3 cut(s)	222, 826, 908
NmeAIII	GCCGAG	1 cut(s)	473
NmuCI	GTSAC	1 cut(s)	121
NsiI	ATGCAT	1 cut(s)	459
NspI	RCATGY	2 cut(s)	461, 847
PaeR7I	CTCGAG	1 cut(s)	677
PciI	ACATGT	1 cut(s)	843
PfeI	GAWTC	1 cut(s)	69
PkrI	GCNGC	1 cut(s)	1087
PleI	GAGTC	1 cut(s)	669
PpsI	GAGTC	1 cut(s)	669
Ppu21I	YACGTR	1 cut(s)	1091
PpuMI	RGGWCCY	1 cut(s)	1100
PscI	ACATGT	1 cut(s)	843
PshBI	ATTAAT	1 cut(s)	777
Psp5II	RGGWCCY	1 cut(s)	1100
PspEI	GGTNACC	1 cut(s)	620
PspN4I	GGNNCC	3 cut(s)	222, 826, 908
PspPI	GGNCC	1 cut(s)	1100
PspPPI	RGGWCCY	1 cut(s)	1100
PspXI	VCTCGAGB	1 cut(s)	677
PsuI	RGATCY	2 cut(s)	164, 246
RsaI	GTAC	3 cut(s)	189, 634, 767
RsaNI	GTAC	3 cut(s)	188, 633, 766
RseI	CAYNNNNRTG	1 cut(s)	518
SaqAI	TTAA	6 cut(s)	326, 342, 563, 669, 687, 777
SatI	GCNGC	1 cut(s)	1086
Sau3AI	GATC	7 cut(s)	97, 164, 246, 435, 510, 739, 949
Sau96I	GGNCC	1 cut(s)	1100
ScaI	AGTACT	1 cut(s)	767
SchI	GAGTC	1 cut(s)	669
SduI	GDGCHC	3 cut(s)	55, 93, 961
SfaNI	GCATC	3 cut(s)	444, 703, 889
Sfr274I	CTCGAG	1 cut(s)	677
SinI	GGWCC	1 cut(s)	1100
SlaI	CTCGAG	1 cut(s)	677
SmiMI	CAYNNNNRTG	1 cut(s)	518
SmlI	CTYRAG	2 cut(s)	677, 761
SmoI	CTYRAG	2 cut(s)	677, 761
SspI	AATATT	3 cut(s)	387, 1056, 1080
SspMI	CTAG	2 cut(s)	747, 819
StyI	CCWWGG	2 cut(s)	355, 471
TaaI	ACNGT	4 cut(s)	187, 580, 594, 1034
TaiI	ACGT	2 cut(s)	1066, 1093
TaqI	TCGA	4 cut(s)	663, 678, 933, 1120
TatI	WGTACW	1 cut(s)	765
TfiI	GAWTC	1 cut(s)	69
Tru1I	TTAA	6 cut(s)	326, 342, 563, 669, 687, 777
Tru9I	TTAA	6 cut(s)	326, 342, 563, 669, 687, 777
TscAI	CASTG	3 cut(s)	130, 202, 559
TseFI	GTSAC	1 cut(s)	121
TseI	GCWGC	1 cut(s)	1085
Tsp45I	GTSAC	1 cut(s)	121
TspDTI	ATGAA	2 cut(s)	17, 45
TspGWI	ACGGA	1 cut(s)	667
TspRI	CASTG	3 cut(s)	130, 202, 559
VneI	GTGCAC	1 cut(s)	89
VpaK11BI	GGWCC	1 cut(s)	1100
VspI	ATTAAT	1 cut(s)	777
XapI	RAATTY	3 cut(s)	350, 541, 861
XceI	RCATGY	2 cut(s)	461, 847
XcmI	CCANNNNNNNNNTGG	1 cut(s)	977
XhoI	CTCGAG	1 cut(s)	677
XmiI	GTMKAC	1 cut(s)	788
XspI	CTAG	2 cut(s)	747, 819
ZrmI	AGTACT	1 cut(s)	767
Zsp2I	ATGCAT	1 cut(s)	459

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.