RchiOBHm_Chr1g0341751

Glutamate receptor

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000294
Physical Location & Seq
Reverse (-)
33495840 .. 33499821
3982 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56843

Sequence Viewer

Length: 2640 bp
ATGGAGTTTCAAGGGAAGAAGCAAACCATTTTCTGCCTATCCTTTGTGACCTTTTGCCTCCTCGGTGACATTTTTGCTCAAAGTAATGAAGAATTAATGCATTATGATAATAATCCGCTAACTGTGGAAGAAGTTCGTGTCGGTGTGATTCTGGATATGCAATCAAGGGAAGGAAAGATTGTACTCGGCTGCATTTCGACGGCTCTGTCAGATTTTTATCATCTGCATAATAATTACAGCACAAGAGTGGTACTCCACAGTAGAGACTCCAGTGGAAAACATCTACATGCTCTATCAGCTGCTCTTGATCTTTTGAATAACATCAAAGTGGAAGCAATAATTGGTGCACAAACAAGAATGGAAGCAAACCTATTAGCGGATTTAGGAGAAGATGTTGAAGTCCCTATATTGTCTCTATCTCAACCTAGTCTAGCCCCTCCTCTGACCGACAAAAATCCCTTCTTTGTTGAGGTCACACAGGATGAAACTTTGCAGGTTACAGGGATCACTGCTCTTATTGAAATCTTCACATGGAGAAATGTTATCCTTCTATATGAGATGACAAATCATGCAAGTGACATAATTCCATCTTTGATCAATTCCTTCCAAGAGAAAAATGTCTATATTTCATATATAAGTTCCATTTCTGTTTCCTCAACTACTGAACAAATCATTGAAGAGCTTCAAAAGCTAAAGGCATTAGACAATACAGTATTTGTGGTGCATATCTCACATTTTCTTGTACCTCGGCTTTTTATGGATGCAAAGAAGCTAGGAATGATGAGTGAAGGGTATGCTTGGATTCTGACATCAACAAGCTTGAATTTCTTGAATTCTATGGATTCTGCTGTGATTGAATCAATGCAAGGAGTGCTGGGGTTGAAGTCGCATATTCCAACTTCAAGGAGCCTCCATAATCTTACTTCTAGATTGAGGAGAAAATTGTACATCGAGGAGTCCCATATGGAAGTACTGGAATTAAGTGCTGATGCAATCTGGGCATATGATTCAACTTGGATCCTCGCAGAAGCAGTTGAGAGGTCACGGATTAAAATTTCTACAAGTCTAAATCGAAAGGATTTAAACGATATTAAATCCTCTAAGCCTGGAAGTGTGCTTCGTGAAGAAATACTGCAAAGTAGGGTTAAAGGATTAAGTGGTGAAATTCAGTATCCAAAGCAGAAGCTAATTGCAGACAAACTTGAGATAGTAAATGTGATAGGGAAGGGGGAGAGAAGAATTGGAATTTTGACTTTTGAAGAAGAAAAAACAAAAGAATCACAGTCCCTTAAAAGCAAAAGAAATTTACTTTCCACCAGTGATCTGGAAACTGTCATATGGCCTGGAGGATCATCAACCATTACGAAAGGTTCCAAGAGGAAATTGAGTGAAACAAAATTAAGAGTTGGTGTTCCCCCAAAGAGAGGGTTTGAGGAACTTGTGCATGTGAAACATGACTTCCAAACCAATAAAACATATTTCACAGGCTTCTGTATAGATGTGTTTGAAACTGCAATAAGAGGATTGCCCTATAAAGTACAATATGAGTTTATCCCATTTGAGAATGCTAATGAACTTTCGGCTGGGAGGTACAATGATCTTGTTTACCAGGTTTATCTCCAGGTATACGATGCTGTTGTTGGAGATACGACAATCACATCAAACAGATCGTTATATGTTGATTTTACAGTACCATATTCTGACTTGGGCGTGGGAATGCTAGTAGCAAATGAAAAGGAAAACATGTGGATTTTCTTAAGACCTCTTTCAGCAGATCTTTGGATGACAAGTGCTGGTTTATTTATGCTAACTGGTTTTGTTGTGTGGGTAATTGAGCGTCCTACAAACACAGAATTCCAGGGCACATTATCACAGCAAATTGGAACAATATTCTGGTTCTCCTTTTCAACCCTAGTGTTTGCTCATAGGGAGAAGTTGTTGAACAATTCAGCAAAGTTTGTAGTCGTCATATGGGTTTTTGTAGTTCTTATATTGACTTCTAGTTACACTGCAACTTTAGCATCAATGATGACAGTTAAACAAATGCAATTAAATGCCGGAGGACACTACATAGGTTACCAGTCTGGTTCATTCATCACCGCAAATGCTGTAGAGTACTTGAATTTCAGTGGGGCTAAACCTTATCGTTCGGTTGAAGCATATGCTGATGCTTTATCAAGAGGGAGTAAGCATGGTGGTGTTTCTGCTATTGTTGACGAGGTACCATACATTAAGGTCTTCCTTGCAAAGTATTCTGAGGGCTACTCCATGATTAAAACCGAGTCTACTACCAATGGTTTTGGCTTTGCTTTCCCTAAAGGCTCGAAATTGGCACAAGACATGTCAACGCAAATTGAAAAATTGAGAGAAGAAGGAAAGCTTTTAGAGATGGAAAAGGCCTGGTTTCATTATAATGGAAATCACATGTCTGAGGACACAACAAGTCCTCCCAATACTCTTAATCTCAGCAGCTTTTGTGGTTTATTCCTTGTTACGGGGGTTTCTTCAGCTTTTGCTCTATTTTTGTTCATAATTTCTCCACTCAGAGAGAAATGGCAACTTGTGAAGAAATGCAGATATCTTATTCAGGGTAAGCTGCTGAATGTATGGAGATCCCTTTCTAGCAGAGTTTCCAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
ANF_receptor Lig_chan Lig_chan-Glu_bd SBP_bac_3

Protein Analysis

879

Amino Acids

98.86

Weight (kDa)

6.48

Isoelectric Point (pI)

40.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Peripla_BP_6 PF13458 45 - 349 5e-08 Periplasmic binding protein
ANF_receptor PF01094 64 - 408 1.7e-58 Receptor family ligand binding region
Lig_chan-Glu_bd PF10613 485 - 577 1.9e-09 Ligated ion channel L-glutamate- and glycine-binding site
SBP_bac_3 PF00497 487 - 803 1.5e-10 Bacterial extracellular solute-binding proteins, family 3
Lig_chan PF00060 591 - 834 1.3e-29 Ligand-gated ion channel
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000294)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G07520 AT5G48400 AT5G48400 AT5G48410 AT5G48410 AT5G48410 AT5G48410
fragaria_vesca FvH4_1g26430 FvH4_7g07770 FvH4_7g07820 FvH4_7g07830 FvH4_7g07830
malus_domestica MD02G1232900.v1.1 MD02G1233100.v1.1 MD07G1080800.v1.1
prunus_persica Prupe.2G105100_v2.0.a1 Prupe.2G105200_v2.0.a1 Prupe.2G105300_v2.0.a1 Prupe.2G105400_v2.0.a1 Prupe.2G105500_v2.0.a1 Prupe.2G105600_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105700_v2.0.a1 Prupe.2G105800_v2.0.a1
pyrus_communis pycom02g20100 pycom07g06420
rosa_chinensis RchiOBHm_Chr1g0341721 RchiOBHm_Chr1g0341731 RchiOBHm_Chr1g0341751 RchiOBHm_Chr1g0341761 RchiOBHm_Chr1g0341831 RchiOBHm_Chr1g0341851 RchiOBHm_Chr1g0341911 RchiOBHm_Chr1g0342001 RchiOBHm_Chr1g0342301 RchiOBHm_Chr5g0063031 RchiOBHm_Chr5g0063061
rosa_laevigata RLG00000029107 RLG00000029109 RLG00000029110 RLG00000029111 RLG00000029123 RLG00000029125 RLG00000029131 RLG00000029136 RLG00000029150 RLG00000029650 RLG00000029651 RLG00000035598
rosa_multiflora Rmu_sc0000696.1_g000008 Rmu_sc0001055.1_g000009 Rmu_sc0001055.1_g000014 Rmu_sc0001547.1_g000003 Rmu_sc0002161.1_g000003 Rmu_sc0002302.1_g000023 Rmu_sc0002322.1_g000082 Rmu_sc0004658.1_g000002 Rmu_sc0005331.1_g000003 Rmu_sc0007655.1_g000001 Rmu_sc0007655.1_g000003 Rmu_sc0018911.1_g000004 Rmu_sc0018911.1_g000011 Rmu_sc0034500.1_g000001
rosa_roxburghii Rroxscaffold_4G00312490 Rroxscaffold_4G00312540 Rroxscaffold_4G00312660 Rroxscaffold_4G00312720 Rroxscaffold_4G00312820 Rroxscaffold_4G00312930
rosa_rugosa Rorug01G0151800.1 Rorug01G0151900.1 Rorug01G0152000.1 Rorug01G0154000.1 Rorug01G0154100.1 Rorug05G0353600 Rorug05G0353700 Rorug05G0353800
rosa_samantha Rh1AG166600 Rh1AG168100 Rh1AG169100 Rh1AG169200 Rh1AG169600 Rh1AG169800 Rh1BG132800 Rh1BG132900 Rh1BG133600 Rh1BG133700 Rh1BG134800 Rh1BG135300 Rh1BG135500 Rh1BG135900 Rh1BG136000 Rh1BG136100 Rh1BG136400 Rh1BG137300 Rh1BG137600 Rh1BG137800 Rh1CG155000 Rh1CG155600 Rh1CG156900 Rh1CG157500 Rh1CG157800 Rh1CG158100 Rh1DG167700 Rh1DG168200 Rh1DG168900 Rh1DG169000 Rh1DG169500 Rh5AG414400 Rh5BG429200 Rh5CG452600 Rh5DG379600 Rh5DG442600 Rh5DG442700
rosa_wichuraiana Rw0G014260 Rw0G017550 Rw1G013900 Rw1G014090 Rw1G014110 Rw1G014130 Rw1G014150 Rw5G038950

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2412
AasI GACNNNNNNGTC 1 cut(s) 205
Acc36I ACCTGC 1 cut(s) 484
Acc65I GGTACC 1 cut(s) 2221
AccB1I GGYRCC 1 cut(s) 2221
AccI GTMKAC 2 cut(s) 1626, 2285
AciI CCGC 3 cut(s) 116, 377, 2100
AclWI GGATC 5 cut(s) 512, 1012, 1025, 1357, 2607
AcsI RAATTY 8 cut(s) 823, 832, 1053, 1164, 1245, 1303, 1853, 2122
AcuI CTGAAG 1 cut(s) 2490
AfiI CCNNNNNNNGG 3 cut(s) 376, 1424, 2494
AflII CTTAAG 1 cut(s) 1756
AflIII ACRYGT 3 cut(s) 1743, 2340, 2424
AjnI CCWGG 6 cut(s) 1105, 1342, 1608, 1620, 1857, 2399
AjuI GAANNNNNNNTTGG 2 cut(s) 324, 356
AleI CACNNNNGTG 1 cut(s) 245
Alw21I GWGCWC 1 cut(s) 349
Alw26I GTCTC 2 cut(s) 258, 417
Alw44I GTGCAC 1 cut(s) 345
AlwI GGATC 5 cut(s) 512, 1012, 1025, 1357, 2607
AoxI GGCC 2 cut(s) 1340, 2397
ApaLI GTGCAC 1 cut(s) 345
ApeKI GCWGC 4 cut(s) 189, 299, 2469, 2596
ApoI RAATTY 8 cut(s) 823, 832, 1053, 1164, 1245, 1303, 1853, 2122
AseI ATTAAT 1 cut(s) 95
Asp700I GAANNNNTTC 2 cut(s) 132, 681
Asp718I GGTACC 1 cut(s) 2221
AsuHPI GGTGA 3 cut(s) 77, 1172, 2089
BaeGI GKGCMC 2 cut(s) 349, 1865
BamHI GGATCC 1 cut(s) 1017
BanI GGYRCC 1 cut(s) 2221
BbsI GAAGAC 1 cut(s) 2230
Bbv12I GWGCWC 1 cut(s) 349
BbvI GCAGC 4 cut(s) 176, 286, 2481, 2583
BccI CCATC 2 cut(s) 595, 2383
BceAI ACGGC 1 cut(s) 216
BciT130I CCWGG 6 cut(s) 1107, 1344, 1610, 1622, 1859, 2401
BciVI GTATCC 1 cut(s) 1182
BclI TGATCA 1 cut(s) 594
BcoDI GTCTC 2 cut(s) 258, 417
BfaI CTAG 8 cut(s) 426, 431, 773, 927, 1721, 1913, 2001, 2622
BfmI CTRYAG 1 cut(s) 2109
BfrI CTTAAG 1 cut(s) 1756
BfuAI ACCTGC 1 cut(s) 484
BfuI GTATCC 1 cut(s) 1182
BglII AGATCT 1 cut(s) 1774
BisI GCNGC 4 cut(s) 190, 300, 2470, 2597
BlsI GCNGC 4 cut(s) 191, 301, 2471, 2598
BmcAI AGTACT 2 cut(s) 972, 2117
Bme1390I CCNGG 6 cut(s) 1107, 1344, 1610, 1622, 1859, 2401
BmiI GGNNCC 4 cut(s) 908, 1019, 1372, 2223
BmrFI CCNGG 6 cut(s) 1107, 1344, 1610, 1622, 1859, 2401
BmsI GCATC 5 cut(s) 751, 979, 1621, 2030, 2158
BpiI GAAGAC 1 cut(s) 2230
BplI GAGNNNNNCTC 4 cut(s) 237, 269, 2249, 2281
BpmI CTGGAG 3 cut(s) 253, 1365, 1604
BpuEI CTTGAG 1 cut(s) 1223
BsaBI GATNNNNATC 2 cut(s) 111, 216
BsaJI CCNNGG 3 cut(s) 61, 746, 1858
BsaXI ACNNNNNCTCC 6 cut(s) 378, 408, 1922, 1952, 2431, 2461
Bsc4I CCNNNNNNNGG 3 cut(s) 376, 1424, 2494
Bse1I ACTGG 5 cut(s) 270, 978, 1317, 1816, 2080
Bse8I GATNNNNATC 2 cut(s) 111, 216
BseBI CCWGG 6 cut(s) 1107, 1344, 1610, 1622, 1859, 2401
BseDI CCNNGG 3 cut(s) 61, 746, 1858
BseGI GGATG 3 cut(s) 487, 766, 1788
BseJI GATNNNNATC 2 cut(s) 111, 216
BseLI CCNNNNNNNGG 3 cut(s) 376, 1424, 2494
BseMII CTCAG 4 cut(s) 2247, 2421, 2479, 2557
BseNI ACTGG 5 cut(s) 270, 978, 1317, 1816, 2080
BseRI GAGGAG 4 cut(s) 50, 429, 949, 968
BseSI GKGCMC 2 cut(s) 349, 1865
BseXI GCAGC 4 cut(s) 176, 286, 2481, 2583
BseYI CCCAGC 2 cut(s) 874, 1583
BshFI GGCC 2 cut(s) 1342, 2399
BshNI GGYRCC 1 cut(s) 2221
BsiHKAI GWGCWC 1 cut(s) 349
BsiSI CCGG 1 cut(s) 2058
BslFI GGGAC 3 cut(s) 386, 943, 1270
BslI CCNNNNNNNGG 3 cut(s) 376, 1424, 2494
BsmAI GTCTC 2 cut(s) 258, 417
BsmFI GGGAC 3 cut(s) 386, 943, 1270
BsmI GAATGC 2 cut(s) 1570, 1722
BsnI GGCC 2 cut(s) 1342, 2399
Bsp1286I GDGCHC 2 cut(s) 349, 1865
Bsp1407I TGTACA 1 cut(s) 945
BspACI CCGC 3 cut(s) 116, 377, 2100
BspANI GGCC 2 cut(s) 1342, 2399
BspCNI CTCAG 4 cut(s) 2248, 2422, 2478, 2556
BspLI GGNNCC 4 cut(s) 908, 1019, 1372, 2223
BspMI ACCTGC 1 cut(s) 484
BspPI GGATC 5 cut(s) 512, 1012, 1025, 1357, 2607
BspQI GCTCTTC 1 cut(s) 672
BspT107I GGYRCC 1 cut(s) 2221
BspTI CTTAAG 1 cut(s) 1756
BsrGI TGTACA 1 cut(s) 945
BsrI ACTGG 5 cut(s) 270, 978, 1317, 1816, 2080
BssECI CCNNGG 3 cut(s) 61, 746, 1858
BssNAI GTATAC 1 cut(s) 1627
Bst1107I GTATAC 1 cut(s) 1627
Bst2UI CCWGG 6 cut(s) 1107, 1344, 1610, 1622, 1859, 2401
Bst4CI ACNGT 7 cut(s) 124, 260, 712, 1284, 1333, 1690, 2035
Bst6I CTCTTC 1 cut(s) 672
BstAFI CTTAAG 1 cut(s) 1756
BstAPI GCANNNNNTGC 1 cut(s) 871
BstAUI TGTACA 1 cut(s) 945
BstDEI CTNAG 5 cut(s) 1101, 2256, 2430, 2465, 2543
BstEII GGTNACC 1 cut(s) 2075
BstF5I GGATG 3 cut(s) 487, 766, 1788
BstMAI GTCTC 2 cut(s) 258, 417
BstMWI GCNNNNNNNGC 5 cut(s) 296, 688, 871, 998, 2018
BstNI CCWGG 6 cut(s) 1107, 1344, 1610, 1622, 1859, 2401
BstNSI RCATGY 5 cut(s) 290, 1448, 1747, 2344, 2428
BstPI GGTNACC 1 cut(s) 2075
BstSCI CCNGG 6 cut(s) 1105, 1342, 1608, 1620, 1857, 2399
BstSFI CTRYAG 1 cut(s) 2109
BstSLI GKGCMC 2 cut(s) 349, 1865
BstV1I GCAGC 4 cut(s) 176, 286, 2481, 2583
BstV2I GAAGAC 1 cut(s) 2230
BstX2I RGATCY 3 cut(s) 1017, 1774, 2612
BstXI CCANNNNNNTGG 1 cut(s) 1324
BstYI RGATCY 3 cut(s) 1017, 1774, 2612
BstZ17I GTATAC 1 cut(s) 1627
BsuI GTATCC 1 cut(s) 1182
BsuRI GGCC 2 cut(s) 1342, 2399
BtsCI GGATG 3 cut(s) 487, 766, 1788
BtsI GCAGTG 2 cut(s) 507, 2007
BtsIMutI CAGTG 5 cut(s) 277, 507, 1324, 2007, 2134
BveI ACCTGC 1 cut(s) 484
CseI GACGC 1 cut(s) 1826
CsiI ACCWGGT 1 cut(s) 1608
DdeI CTNAG 5 cut(s) 1101, 2256, 2430, 2465, 2543
DraI TTTAAA 1 cut(s) 1083
DrdI GACNNNNNNGTC 1 cut(s) 205
DseDI GACNNNNNNGTC 1 cut(s) 205
Eam1104I CTCTTC 1 cut(s) 672
EarI CTCTTC 1 cut(s) 672
Eco147I AGGCCT 1 cut(s) 2399
Eco32I GATATC 1 cut(s) 2579
Eco57I CTGAAG 1 cut(s) 2490
Eco91I GGTNACC 1 cut(s) 2075
EcoO65I GGTNACC 1 cut(s) 2075
EcoRI GAATTC 2 cut(s) 832, 1853
EcoRII CCWGG 6 cut(s) 1105, 1342, 1608, 1620, 1857, 2399
EcoRV GATATC 1 cut(s) 2579
EcoT22I ATGCAT 1 cut(s) 102
FalI AAGNNNNNCTT 2 cut(s) 2364, 2396
FaqI GGGAC 3 cut(s) 386, 943, 1270
FauNDI CATATG 5 cut(s) 963, 1003, 1337, 1970, 2161
FbaI TGATCA 1 cut(s) 594
FblI GTMKAC 2 cut(s) 1626, 2285
Fnu4HI GCNGC 4 cut(s) 190, 300, 2470, 2597
FokI GGATG 3 cut(s) 494, 773, 1795
Fsp4HI GCNGC 4 cut(s) 190, 300, 2470, 2597
FspBI CTAG 8 cut(s) 426, 431, 773, 927, 1721, 1913, 2001, 2622
GluI GCNGC 4 cut(s) 190, 300, 2470, 2597
GsaI CCCAGC 2 cut(s) 878, 1587
GsuI CTGGAG 3 cut(s) 253, 1365, 1604
HaeIII GGCC 2 cut(s) 1342, 2399
HapII CCGG 1 cut(s) 2058
HgaI GACGC 1 cut(s) 1826
HincII GTYRAC 2 cut(s) 2215, 2346
HindII GTYRAC 2 cut(s) 2215, 2346
HindIII AAGCTT 2 cut(s) 817, 2378
HinfI GANTC 9 cut(s) 148, 266, 802, 842, 857, 956, 1007, 1277, 2282
HpaII CCGG 1 cut(s) 2058
HphI GGTGA 3 cut(s) 77, 1172, 2089
Hpy166II GTNNAC 6 cut(s) 347, 1606, 1627, 2215, 2286, 2346
Hpy188I TCNGA 7 cut(s) 211, 444, 807, 1702, 2257, 2431, 2546
Hpy188III TCNNGA 7 cut(s) 152, 305, 829, 927, 1121, 1325, 2178
Hpy8I GTNNAC 6 cut(s) 347, 1606, 1627, 2215, 2286, 2346
Hpy99I CGWCG 1 cut(s) 202
HpyAV CCTTC 7 cut(s) 164, 469, 557, 613, 782, 1219, 2366
HpyCH4III ACNGT 7 cut(s) 124, 260, 712, 1284, 1333, 1690, 2035
HpyF10VI GCNNNNNNNGC 5 cut(s) 296, 688, 871, 998, 2018
HpyF3I CTNAG 5 cut(s) 1101, 2256, 2430, 2465, 2543
KpnI GGTACC 1 cut(s) 2225
Ksp22I TGATCA 1 cut(s) 594
LguI GCTCTTC 1 cut(s) 672
LmnI GCTCC 1 cut(s) 906
Lsp1109I GCAGC 4 cut(s) 176, 286, 2481, 2583
LweI GCATC 5 cut(s) 751, 979, 1621, 2030, 2158
MabI ACCWGGT 1 cut(s) 1608
MaeI CTAG 8 cut(s) 426, 431, 773, 927, 1721, 1913, 2001, 2622
MaeIII GTNAC 9 cut(s) 46, 65, 472, 496, 575, 1041, 2003, 2075, 2491
MflI RGATCY 3 cut(s) 1017, 1774, 2612
MhlI GDGCHC 2 cut(s) 349, 1865
MlyI GAGTC 3 cut(s) 260, 965, 2291
MmeI TCCRAC 2 cut(s) 920, 1621
Mph1103I ATGCAT 1 cut(s) 102
MroXI GAANNNNTTC 2 cut(s) 132, 681
MslI CAYNNNNRTG 6 cut(s) 245, 285, 326, 573, 2196, 2412
MspA1I CMGCKG 1 cut(s) 299
MspCI CTTAAG 1 cut(s) 1756
MspI CCGG 1 cut(s) 2058
MspR9I CCNGG 6 cut(s) 1107, 1344, 1610, 1622, 1859, 2401
Mva1269I GAATGC 2 cut(s) 1570, 1722
MvaI CCWGG 6 cut(s) 1107, 1344, 1610, 1622, 1859, 2401
MwoI GCNNNNNNNGC 5 cut(s) 296, 688, 871, 998, 2018
NdeI CATATG 5 cut(s) 963, 1003, 1337, 1970, 2161
NlaIV GGNNCC 4 cut(s) 908, 1019, 1372, 2223
NmeAIII GCCGAG 2 cut(s) 165, 727
NmuCI GTSAC 5 cut(s) 46, 65, 472, 575, 1041
NsiI ATGCAT 1 cut(s) 102
NspI RCATGY 5 cut(s) 290, 1448, 1747, 2344, 2428
OliI CACNNNNGTG 1 cut(s) 245
PceI AGGCCT 1 cut(s) 2399
PciI ACATGT 3 cut(s) 1743, 2340, 2424
PciSI GCTCTTC 1 cut(s) 672
PctI GAATGC 2 cut(s) 1570, 1722
PdmI GAANNNNTTC 2 cut(s) 132, 681
PfeI GAWTC 6 cut(s) 148, 802, 842, 857, 1007, 1277
PkrI GCNGC 4 cut(s) 191, 301, 2471, 2598
PleI GAGTC 3 cut(s) 260, 964, 2290
PpsI GAGTC 3 cut(s) 260, 964, 2290
PscI ACATGT 3 cut(s) 1743, 2340, 2424
PshBI ATTAAT 1 cut(s) 95
PsiI TTATAA 1 cut(s) 2412
Psp6I CCWGG 6 cut(s) 1105, 1342, 1608, 1620, 1857, 2399
PspEI GGTNACC 1 cut(s) 2075
PspFI CCCAGC 2 cut(s) 874, 1583
PspGI CCWGG 6 cut(s) 1105, 1342, 1608, 1620, 1857, 2399
PspN4I GGNNCC 4 cut(s) 908, 1019, 1372, 2223
PsuI RGATCY 3 cut(s) 1017, 1774, 2612
PvuII CAGCTG 1 cut(s) 299
RseI CAYNNNNRTG 6 cut(s) 245, 285, 326, 573, 2196, 2412
SapI GCTCTTC 1 cut(s) 672
SatI GCNGC 4 cut(s) 190, 300, 2470, 2597
ScaI AGTACT 2 cut(s) 972, 2117
SchI GAGTC 3 cut(s) 260, 965, 2291
ScrFI CCNGG 6 cut(s) 1107, 1344, 1610, 1622, 1859, 2401
SduI GDGCHC 2 cut(s) 349, 1865
SexAI ACCWGGT 1 cut(s) 1608
SfaNI GCATC 5 cut(s) 751, 979, 1621, 2030, 2158
SfcI CTRYAG 1 cut(s) 2109
SmiMI CAYNNNNRTG 6 cut(s) 245, 285, 326, 573, 2196, 2412
SmlI CTYRAG 2 cut(s) 1202, 1756
SmoI CTYRAG 2 cut(s) 1202, 1756
SseBI AGGCCT 1 cut(s) 2399
SsiI CCGC 3 cut(s) 116, 377, 2100
SspI AATATT 1 cut(s) 1890
SspMI CTAG 8 cut(s) 426, 431, 773, 927, 1721, 1913, 2001, 2622
StuI AGGCCT 1 cut(s) 2399
StyD4I CCNGG 6 cut(s) 1105, 1342, 1608, 1620, 1857, 2399
TaaI ACNGT 7 cut(s) 124, 260, 712, 1284, 1333, 1690, 2035
TaqI TCGA 4 cut(s) 197, 951, 1072, 2324
TaqII GACCGA 1 cut(s) 461
TatI WGTACW 5 cut(s) 181, 945, 970, 1537, 2115
TfiI GAWTC 6 cut(s) 148, 802, 842, 857, 1007, 1277
TscAI CASTG 5 cut(s) 277, 514, 1324, 2014, 2134
TseFI GTSAC 5 cut(s) 46, 65, 472, 575, 1041
TseI GCWGC 4 cut(s) 189, 299, 2469, 2596
Tsp45I GTSAC 5 cut(s) 46, 65, 472, 575, 1041
TspDTI ATGAA 9 cut(s) 102, 498, 618, 1587, 1746, 2079, 2083, 2396, 2518
TspGWI ACGGA 1 cut(s) 1060
TspRI CASTG 5 cut(s) 277, 514, 1324, 2014, 2134
Vha464I CTTAAG 1 cut(s) 1756
VneI GTGCAC 1 cut(s) 345
VspI ATTAAT 1 cut(s) 95
XapI RAATTY 8 cut(s) 823, 832, 1053, 1164, 1245, 1303, 1853, 2122
XbaI TCTAGA 1 cut(s) 926
XceI RCATGY 5 cut(s) 290, 1448, 1747, 2344, 2428
XcmI CCANNNNNNNNNTGG 1 cut(s) 1321
XmiI GTMKAC 2 cut(s) 1626, 2285
XmnI GAANNNNTTC 2 cut(s) 132, 681
XspI CTAG 8 cut(s) 426, 431, 773, 927, 1721, 1913, 2001, 2622
ZrmI AGTACT 2 cut(s) 972, 2117
Zsp2I ATGCAT 1 cut(s) 102
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.