FvH4_3g41972

Enhancer of mRNA-decapping protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000324
Physical Location & Seq
Reverse (-)
35119164 .. 35122734
3571 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g41972.t1

Sequence Viewer

Length: 1521 bp
ATGGATCTCAATAGCGCTAACTTTGATCATTACAGTGAGATGAAAGATAAGTCGGTAGAATGTGATTCATGTAAAAAAACAAATTTTCACTCGCCCACGAACCACAACAGGCTTACTTGTGAGTTGCCGTTGTTGAAACTTAGGCTTCAACAAATTCATCTTCAACATATTCTTCTTCAAGAACGACTATGTCGTAAGCCCCTCAACTGCATCGCTTCTGAAAAAGTAGACCCCTTTCATGTAGTGAAGCTTCGTGGCCAAGTCCATGCTTCTGATGCTCTGGTGGTCGAAGAAGCTGAGCATAAAAATAAGAAGAAAATTGCACAAGATGAAGTATCTAGTGTGCTCGATCGTCCTATCATGTTCAAACATCCCATGCGTCCAATAAGTCCGTCAGAGTTTTTGATGGCCCCTTCTTCCTCTGAAAATACAAATACAGTTGACAGCAACACTGCTTCTTCGTTATATGAGCTAATGGAACAGCTTGAAGCAGGTGGGAGTTCAAGTCCCCCCTCTGGAGAAGCTGCAGTTCCTCAAACTATGTCCCTGCAGGATATGATTATTCAGCTAATGGATATGCAAAGAGAATTGCCACAGAAGATGTCAATGATGGAGAAGGCTGTAGAAGCCTATAATGATGCTCTGTGGGCTCGGCTTCAAGAAGAGATTTCTAAACAAGTAACTGGTTTGATCAATAACTTTCTAAACAAGGACTTTCTAGTCGTGTTAGAGAAAATGGTGAAAAAAGAATTAGCTGCTGTTGGACCATATGTTGTTCGTGAAATCACTCCAGCTCTAGAGAAAACAATATCTTTGGCTATATCTGATTGCTTTCAGAGAGGAGTGGTCGATAAAGCAGTTAATCAATTGGAGAAATCGGTCAACTCAAAACTTGAAGCTACTGTATCCAGGCAAATCCAGGCACAATTTCAAACCTCGGGTAAACAAGCTCTTCAGGACGCTATCAAGTCAAGTATGGAAGCTTCAGTGGTACCTGCATTTGAGAAGTCTTGTAAAGCGATGCTTGAGCAAGTAGATGCTACAGTCGAGCGGCATTTTCAGTTTGCGCATTCACCATTGGCCAATGCTTTAAGGGAAGCGATTAGCTCCTCATCATCAGTGACTCAAACCCTAAGCAGAGAATTGGCTGATGGCCAACGCAATTTACTGAATTTAGTGGCACTTATAGCAAAAGCCCAGCTGTCAAGGTTGGTGAGTGAACGCAGGTATGATGAGGCTTTCACAAGTGCTCTAGAAATGAGCGATGTTGGCATTGTATCATGGTTATGTGCTCAGGTTGATCTTCATGGCATACTGTTGCAGGAACATGTTCCTCTGAGCATAGAAGTACTTATATCACTCTTGAAACATCTCGCCTCTGATAACAACAAAAATGAACCCCGTAAACTTGCTTGGAAGAGAGACGTGATAGACGCCCTAAAACGCATTGAAGCGATGGCAATGCACATAAGACCGTACCTTGCGCAAGTTTCTCAGATGAGGCAACGTAGTCTTCAATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000932 GO:0000956 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009892 GO:0009933 GO:0009965 GO:0009987 GO:0010014 GO:0010015 GO:0010016 GO:0010033 GO:0010071 GO:0010072 GO:0010154 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022414 GO:0022622 GO:0023052 GO:0031086 GO:0031087 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0046983 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048508 GO:0048519 GO:0048532 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0090304 GO:0090305 GO:0090421 GO:0097159 GO:0099402 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1905392 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Ge1_WD40

Protein Analysis

507

Amino Acids

56.76

Weight (kDa)

6.45

Isoelectric Point (pI)

51.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
EDC4_C PF21289 403 - 488 2.2e-10 Enhancer of mRNA-decapping protein 4, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000324)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13290 AT3G13300 AT3G13300 AT3G13300
fragaria_vesca FvH4_3g41972 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g42780 FvH4_3g42790 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_4g01881 FvH4_7g10420
malus_domestica MD00G1013700.v1.1 MD03G1039800.v1.1 MD11G1041300.v1.1 MD11G1094900.v1.1
prunus_persica Prupe.6G032100_v2.0.a1
pyrus_communis pycom03g03070 pycom11g03500 pycom11g08470 pycom12g06730
rosa_chinensis RchiOBHm_Chr1g0328831 RchiOBHm_Chr4g0386471 RchiOBHm_Chr4g0386481 RchiOBHm_Chr4g0386551 RchiOBHm_Chr4g0386701 RchiOBHm_Chr4g0386801 RchiOBHm_Chr4g0386811 RchiOBHm_Chr4g0386821 RchiOBHm_Chr4g0386921 RchiOBHm_Chr4g0386931 RchiOBHm_Chr4g0386941 RchiOBHm_Chr4g0387211 RchiOBHm_Chr4g0389101 RchiOBHm_Chr4g0389111 RchiOBHm_Chr4g0389201 RchiOBHm_Chr4g0389211 RchiOBHm_Chr4g0389321 RchiOBHm_Chr4g0389331 RchiOBHm_Chr4g0389341 RchiOBHm_Chr4g0389411 RchiOBHm_Chr5g0075171
rosa_laevigata RLG00000009985 RLG00000009990 RLG00000009996 RLG00000009998 RLG00000010136 RLG00000010140 RLG00000036537
rosa_multiflora Rmu_co8461959.1_g000001 Rmu_sc0000013.1_g000017 Rmu_sc0000013.1_g000024 Rmu_sc0001015.1_g000001 Rmu_sc0001395.1_g000004 Rmu_sc0001942.1_g000022 Rmu_sc0002498.1_g000018 Rmu_sc0002498.1_g000020 Rmu_sc0002557.1_g000005 Rmu_sc0002604.1_g000010 Rmu_sc0002604.1_g000011 Rmu_sc0004750.1_g000003 Rmu_sc0006571.1_g000001 Rmu_sc0006571.1_g000014 Rmu_sc0006571.1_g000018 Rmu_sc0008050.1_g000016 Rmu_sc0008066.1_g000009 Rmu_sc0008380.1_g000006 Rmu_sc0008380.1_g000010 Rmu_sc0008380.1_g000012 Rmu_sc0010272.1_g000021 Rmu_sc0010693.1_g000010 Rmu_sc0010693.1_g000012 Rmu_sc0010693.1_g000014 Rmu_sc0010693.1_g000015 Rmu_sc0031790.1_g000003 Rmu_sc0040539.1_g000001 Rmu_ssc0000211.1_g000001 Rmu_ssc0000211.1_g000011 Rmu_ssc0000211.1_g000013
rosa_roxburghii Rroxscaffold_1G00006420 Rroxscaffold_1G00006430 Rroxscaffold_5G00334020 Rroxscaffold_5G00334050 Rroxscaffold_5G00335420
rosa_rugosa Rorug03G0307600 Rorug03G0308600 Rorug03G0322400 Rorug05G0437200 Rorug05G0437200 Rorug05G0437200
rosa_samantha Rh1BG075700 Rh4BG010000 Rh4BG010100 Rh4BG010200 Rh4BG020000 Rh4BG020400 Rh4BG172100 Rh4CG015300 Rh4CG016300 Rh5AG494100 Rh5AG494200 Rh5BG515500 Rh5CG539300 Rh5DG528200
rosa_wichuraiana Rw4G000930 Rw4G001980 Rw4G001990 Rw4G011950 Rw5G045850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 482
AasI GACNNNNNNGTC 1 cut(s) 719
Acc16I TGCGCA 2 cut(s) 1068, 1485
Acc36I ACCTGC 3 cut(s) 482, 1003, 1215
Acc65I GGTACC 1 cut(s) 991
AccB1I GGYRCC 1 cut(s) 991
AccBSI CCGCTC 1 cut(s) 1051
AccI GTMKAC 1 cut(s) 228
AciI CCGC 1 cut(s) 1051
AclWI GGATC 1 cut(s) 12
AcoI YGGCCR 3 cut(s) 256, 1080, 1153
AcsI RAATTY 3 cut(s) 82, 153, 1171
AcuI CTGAAG 2 cut(s) 938, 969
AcyI GRCGYC 1 cut(s) 1434
AfaI GTAC 3 cut(s) 993, 1350, 1478
AfeI AGCGCT 1 cut(s) 16
AfiI CCNNNNNNNGG 1 cut(s) 515
AflIII ACRYGT 1 cut(s) 1327
AjiI CACGTC 1 cut(s) 1426
AjnI CCWGG 2 cut(s) 908, 918
Alw21I GWGCWC 3 cut(s) 348, 1252, 1294
Alw26I GTCTC 1 cut(s) 1416
AlwI GGATC 1 cut(s) 12
Ama87I CYCGRG 1 cut(s) 937
Aor51HI AGCGCT 1 cut(s) 16
AoxI GGCC 4 cut(s) 256, 408, 1080, 1153
ApeKI GCWGC 2 cut(s) 524, 755
ApoI RAATTY 3 cut(s) 82, 153, 1171
Asp700I GAANNNNTTC 1 cut(s) 1329
Asp718I GGTACC 1 cut(s) 991
AspLEI GCGC 3 cut(s) 17, 1069, 1486
AspS9I GGNCC 2 cut(s) 409, 764
AsuHPI GGTGA 3 cut(s) 751, 1065, 1225
AvaI CYCGRG 1 cut(s) 937
AvaII GGWCC 1 cut(s) 764
BalI TGGCCA 3 cut(s) 258, 1082, 1155
BanI GGYRCC 1 cut(s) 991
BanII GRGCYC 1 cut(s) 652
BarI GAAGNNNNNNTAC 4 cut(s) 234, 266, 967, 999
BbsI GAAGAC 1 cut(s) 1505
Bbv12I GWGCWC 3 cut(s) 348, 1252, 1294
BbvI GCAGC 2 cut(s) 511, 742
BccI CCATC 4 cut(s) 400, 604, 1145, 1450
BceAI ACGGC 1 cut(s) 112
BcgI CGANNNNNNTGC 2 cut(s) 1444, 1478
BciT130I CCWGG 2 cut(s) 910, 920
BciVI GTATCC 1 cut(s) 916
BclI TGATCA 2 cut(s) 25, 690
BcoDI GTCTC 1 cut(s) 1416
BfaI CTAG 4 cut(s) 339, 719, 797, 1253
BfmI CTRYAG 4 cut(s) 525, 548, 621, 1041
BfoI RGCGCY 1 cut(s) 18
BfuAI ACCTGC 3 cut(s) 482, 1003, 1215
BfuI GTATCC 1 cut(s) 916
BisI GCNGC 3 cut(s) 525, 756, 1052
BlpI GCTNAGC 1 cut(s) 297
BlsI GCNGC 3 cut(s) 526, 757, 1053
BmcAI AGTACT 1 cut(s) 1350
Bme1390I CCNGG 2 cut(s) 910, 920
Bme18I GGWCC 1 cut(s) 764
BmeT110I CYCGRG 1 cut(s) 937
BmgBI CACGTC 1 cut(s) 1426
BmgT120I GGNCC 2 cut(s) 409, 764
BmiI GGNNCC 2 cut(s) 411, 993
BmrFI CCNGG 2 cut(s) 910, 920
BmsI GCATC 5 cut(s) 219, 265, 628, 1011, 1027
BpiI GAAGAC 1 cut(s) 1505
BpmI CTGGAG 2 cut(s) 537, 774
Bpu10I CCTNAGC 2 cut(s) 1133, 1293
Bpu1102I GCTNAGC 1 cut(s) 297
BpuEI CTTGAG 1 cut(s) 1046
BsaHI GRCGYC 1 cut(s) 1434
BsaJI CCNNGG 1 cut(s) 936
BsaXI ACNNNNNCTCC 2 cut(s) 490, 520
Bsc4I CCNNNNNNNGG 1 cut(s) 515
Bse1I ACTGG 1 cut(s) 688
Bse3DI GCAATG 1 cut(s) 1467
BseBI CCWGG 2 cut(s) 910, 920
BseDI CCNNGG 1 cut(s) 936
BseGI GGATG 1 cut(s) 370
BseLI CCNNNNNNNGG 1 cut(s) 515
BseMI GCAATG 1 cut(s) 1467
BseMII CTCAG 4 cut(s) 288, 1307, 1328, 1508
BseNI ACTGG 1 cut(s) 688
BseRI GAGGAG 2 cut(s) 855, 1099
BseXI GCAGC 2 cut(s) 511, 742
BseYI CCCAGC 1 cut(s) 1197
Bsh1285I CGRYCG 1 cut(s) 352
BshFI GGCC 4 cut(s) 258, 410, 1082, 1155
BshNI GGYRCC 1 cut(s) 991
BsiEI CGRYCG 1 cut(s) 352
BsiHKAI GWGCWC 3 cut(s) 348, 1252, 1294
BsiHKCI CYCGRG 1 cut(s) 937
BslFI GGGAC 2 cut(s) 492, 529
BslI CCNNNNNNNGG 1 cut(s) 515
BsmAI GTCTC 1 cut(s) 1416
BsmBI CGTCTC 1 cut(s) 1416
BsmFI GGGAC 2 cut(s) 492, 529
BsmI GAATGC 1 cut(s) 1069
BsnI GGCC 4 cut(s) 258, 410, 1082, 1155
BsoBI CYCGRG 1 cut(s) 937
Bsp1286I GDGCHC 4 cut(s) 348, 652, 1252, 1294
Bsp143I GATC 5 cut(s) 4, 25, 349, 690, 1300
Bsp1720I GCTNAGC 1 cut(s) 297
BspACI CCGC 1 cut(s) 1051
BspANI GGCC 4 cut(s) 258, 410, 1082, 1155
BspCNI CTCAG 4 cut(s) 289, 1306, 1329, 1507
BspLI GGNNCC 2 cut(s) 411, 993
BspMAI CTGCAG 2 cut(s) 529, 552
BspMI ACCTGC 3 cut(s) 482, 1003, 1215
BspPI GGATC 1 cut(s) 12
BspQI GCTCTTC 1 cut(s) 957
BspT107I GGYRCC 1 cut(s) 991
BsrBI CCGCTC 1 cut(s) 1051
BsrDI GCAATG 1 cut(s) 1467
BsrI ACTGG 1 cut(s) 688
BssECI CCNNGG 1 cut(s) 936
BssMI GATC 5 cut(s) 4, 25, 349, 690, 1300
BssNI GRCGYC 1 cut(s) 1434
Bst2UI CCWGG 2 cut(s) 910, 920
Bst4CI ACNGT 6 cut(s) 35, 439, 904, 1045, 1317, 1476
Bst6I CTCTTC 3 cut(s) 657, 957, 1412
BstACI GRCGYC 1 cut(s) 1434
BstDEI CTNAG 6 cut(s) 140, 297, 1133, 1293, 1337, 1494
BstF5I GGATG 1 cut(s) 370
BstH2I RGCGCY 1 cut(s) 18
BstHHI GCGC 3 cut(s) 17, 1069, 1486
BstKTI GATC 5 cut(s) 7, 28, 352, 693, 1303
BstMAI GTCTC 1 cut(s) 1416
BstMBI GATC 5 cut(s) 4, 25, 349, 690, 1300
BstMCI CGRYCG 1 cut(s) 352
BstMWI GCNNNNNNNGC 5 cut(s) 275, 626, 647, 1187, 1269
BstNI CCWGG 2 cut(s) 910, 920
BstNSI RCATGY 1 cut(s) 1331
BstSCI CCNGG 2 cut(s) 908, 918
BstSFI CTRYAG 4 cut(s) 525, 548, 621, 1041
BstV1I GCAGC 2 cut(s) 511, 742
BstV2I GAAGAC 1 cut(s) 1505
BstX2I RGATCY 1 cut(s) 4
BstYI RGATCY 1 cut(s) 4
BsuI GTATCC 1 cut(s) 916
BsuRI GGCC 4 cut(s) 258, 410, 1082, 1155
BtgZI GCGATG 4 cut(s) 196, 1034, 1278, 1469
BtrI CACGTC 1 cut(s) 1426
BtsCI GGATG 1 cut(s) 370
BtsI GCAGTG 1 cut(s) 450
BtsIMutI CAGTG 4 cut(s) 40, 450, 993, 1125
BveI ACCTGC 3 cut(s) 482, 1003, 1215
CfoI GCGC 3 cut(s) 17, 1069, 1486
Cfr13I GGNCC 2 cut(s) 409, 764
CseI GACGC 3 cut(s) 368, 968, 1442
Csp6I GTAC 3 cut(s) 992, 1349, 1477
CviAII CATG 8 cut(s) 69, 239, 266, 361, 376, 1281, 1307, 1328
CviQI GTAC 3 cut(s) 992, 1349, 1477
DdeI CTNAG 6 cut(s) 140, 297, 1133, 1293, 1337, 1494
DpnI GATC 5 cut(s) 6, 27, 351, 692, 1302
DpnII GATC 5 cut(s) 4, 25, 349, 690, 1300
DrdI GACNNNNNNGTC 1 cut(s) 719
DseDI GACNNNNNNGTC 1 cut(s) 719
EaeI YGGCCR 3 cut(s) 256, 1080, 1153
Eam1104I CTCTTC 3 cut(s) 657, 957, 1412
EarI CTCTTC 3 cut(s) 657, 957, 1412
Eco24I GRGCYC 1 cut(s) 652
Eco47I GGWCC 1 cut(s) 764
Eco47III AGCGCT 1 cut(s) 16
Eco57I CTGAAG 2 cut(s) 938, 969
Eco88I CYCGRG 1 cut(s) 937
EcoRII CCWGG 2 cut(s) 908, 918
EcoT38I GRGCYC 1 cut(s) 652
Esp3I CGTCTC 1 cut(s) 1416
FaeI CATG 8 cut(s) 72, 242, 269, 364, 379, 1284, 1310, 1331
FalI AAGNNNNNCTT 2 cut(s) 1008, 1040
FaqI GGGAC 2 cut(s) 492, 529
FatI CATG 8 cut(s) 68, 238, 265, 360, 375, 1280, 1306, 1327
FauNDI CATATG 1 cut(s) 769
FbaI TGATCA 2 cut(s) 25, 690
FblI GTMKAC 1 cut(s) 228
Fnu4HI GCNGC 3 cut(s) 525, 756, 1052
FokI GGATG 1 cut(s) 357
FriOI GRGCYC 1 cut(s) 652
Fsp4HI GCNGC 3 cut(s) 525, 756, 1052
FspBI CTAG 4 cut(s) 339, 719, 797, 1253
FspI TGCGCA 2 cut(s) 1068, 1485
GlaI GCGC 3 cut(s) 16, 1068, 1485
GluI GCNGC 3 cut(s) 525, 756, 1052
GsaI CCCAGC 1 cut(s) 1201
GsuI CTGGAG 2 cut(s) 537, 774
HaeII RGCGCY 1 cut(s) 18
HaeIII GGCC 4 cut(s) 258, 410, 1082, 1155
HgaI GACGC 3 cut(s) 368, 968, 1442
HhaI GCGC 3 cut(s) 17, 1069, 1486
Hin1I GRCGYC 1 cut(s) 1434
Hin1II CATG 8 cut(s) 72, 242, 269, 364, 379, 1284, 1310, 1331
Hin6I GCGC 3 cut(s) 15, 1067, 1484
HinP1I GCGC 3 cut(s) 15, 1067, 1484
HincII GTYRAC 2 cut(s) 442, 883
HindII GTYRAC 2 cut(s) 442, 883
HindIII AAGCTT 2 cut(s) 248, 981
HinfI GANTC 2 cut(s) 65, 1123
HphI GGTGA 3 cut(s) 751, 1065, 1225
Hpy166II GTNNAC 6 cut(s) 229, 442, 883, 944, 1220, 1406
Hpy188I TCNGA 9 cut(s) 220, 274, 397, 424, 826, 837, 1338, 1381, 1497
Hpy188III TCNNGA 8 cut(s) 179, 516, 659, 779, 797, 956, 1253, 1363
Hpy8I GTNNAC 6 cut(s) 229, 442, 883, 944, 1220, 1406
HpyAV CCTTC 2 cut(s) 423, 610
HpyCH4III ACNGT 6 cut(s) 35, 439, 904, 1045, 1317, 1476
HpyCH4IV ACGT 2 cut(s) 1425, 1507
HpyCH4V TGCA 8 cut(s) 210, 323, 527, 550, 580, 998, 1321, 1465
HpyF10VI GCNNNNNNNGC 5 cut(s) 275, 626, 647, 1187, 1269
HpyF3I CTNAG 6 cut(s) 140, 297, 1133, 1293, 1337, 1494
HpySE526I ACGT 2 cut(s) 1425, 1507
Hsp92I GRCGYC 1 cut(s) 1434
Hsp92II CATG 8 cut(s) 72, 242, 269, 364, 379, 1284, 1310, 1331
HspAI GCGC 3 cut(s) 15, 1067, 1484
KpnI GGTACC 1 cut(s) 995
Ksp22I TGATCA 2 cut(s) 25, 690
Kzo9I GATC 5 cut(s) 4, 25, 349, 690, 1300
LguI GCTCTTC 1 cut(s) 957
LmnI GCTCC 1 cut(s) 1112
Lsp1109I GCAGC 2 cut(s) 511, 742
LweI GCATC 5 cut(s) 219, 265, 628, 1011, 1027
MaeI CTAG 4 cut(s) 339, 719, 797, 1253
MaeII ACGT 2 cut(s) 1425, 1507
MaeIII GTNAC 2 cut(s) 679, 1120
MalI GATC 5 cut(s) 6, 27, 351, 692, 1302
MbiI CCGCTC 1 cut(s) 1051
MboI GATC 5 cut(s) 4, 25, 349, 690, 1300
MfeI CAATTG 1 cut(s) 866
MflI RGATCY 1 cut(s) 4
MhlI GDGCHC 4 cut(s) 348, 652, 1252, 1294
MlsI TGGCCA 3 cut(s) 258, 1082, 1155
MluNI TGGCCA 3 cut(s) 258, 1082, 1155
MlyI GAGTC 1 cut(s) 1117
MmeI TCCRAC 1 cut(s) 742
Mox20I TGGCCA 3 cut(s) 258, 1082, 1155
MroXI GAANNNNTTC 1 cut(s) 1329
MscI TGGCCA 3 cut(s) 258, 1082, 1155
MseI TTAA 2 cut(s) 861, 1091
MslI CAYNNNNRTG 2 cut(s) 33, 1285
Msp20I TGGCCA 3 cut(s) 258, 1082, 1155
MspA1I CMGCKG 1 cut(s) 1201
MspR9I CCNGG 2 cut(s) 910, 920
MunI CAATTG 1 cut(s) 866
Mva1269I GAATGC 1 cut(s) 1069
MvaI CCWGG 2 cut(s) 910, 920
MwoI GCNNNNNNNGC 5 cut(s) 275, 626, 647, 1187, 1269
NdeI CATATG 1 cut(s) 769
NdeII GATC 5 cut(s) 4, 25, 349, 690, 1300
NlaIII CATG 8 cut(s) 72, 242, 269, 364, 379, 1284, 1310, 1331
NlaIV GGNNCC 2 cut(s) 411, 993
NmeAIII GCCGAG 1 cut(s) 631
NmuCI GTSAC 1 cut(s) 1120
NsbI TGCGCA 2 cut(s) 1068, 1485
NspI RCATGY 1 cut(s) 1331
PaqCI CACCTGC 1 cut(s) 482
PciI ACATGT 1 cut(s) 1327
PciSI GCTCTTC 1 cut(s) 957
PcsI WCGNNNNNNNCGW 1 cut(s) 190
PctI GAATGC 1 cut(s) 1069
PdmI GAANNNNTTC 1 cut(s) 1329
PfeI GAWTC 1 cut(s) 65
PflFI GACNNNGTC 1 cut(s) 189
PkrI GCNGC 3 cut(s) 526, 757, 1053
Ple19I CGATCG 1 cut(s) 352
PleI GAGTC 1 cut(s) 1117
PpsI GAGTC 1 cut(s) 1117
PscI ACATGT 1 cut(s) 1327
Psp6I CCWGG 2 cut(s) 908, 918
PspFI CCCAGC 1 cut(s) 1197
PspGI CCWGG 2 cut(s) 908, 918
PspN4I GGNNCC 2 cut(s) 411, 993
PspPI GGNCC 2 cut(s) 409, 764
PstI CTGCAG 2 cut(s) 529, 552
PsuI RGATCY 1 cut(s) 4
PsyI GACNNNGTC 1 cut(s) 189
PvuI CGATCG 1 cut(s) 352
PvuII CAGCTG 1 cut(s) 1201
RsaI GTAC 3 cut(s) 993, 1350, 1478
RsaNI GTAC 3 cut(s) 992, 1349, 1477
RseI CAYNNNNRTG 2 cut(s) 33, 1285
SapI GCTCTTC 1 cut(s) 957
SaqAI TTAA 2 cut(s) 861, 1091
SatI GCNGC 3 cut(s) 525, 756, 1052
Sau3AI GATC 5 cut(s) 4, 25, 349, 690, 1300
Sau96I GGNCC 2 cut(s) 409, 764
SbfI CCTGCAGG 1 cut(s) 552
ScaI AGTACT 1 cut(s) 1350
SchI GAGTC 1 cut(s) 1117
ScrFI CCNGG 2 cut(s) 910, 920
SdaI CCTGCAGG 1 cut(s) 552
SduI GDGCHC 4 cut(s) 348, 652, 1252, 1294
SfaNI GCATC 5 cut(s) 219, 265, 628, 1011, 1027
SfcI CTRYAG 4 cut(s) 525, 548, 621, 1041
SinI GGWCC 1 cut(s) 764
SmiMI CAYNNNNRTG 2 cut(s) 33, 1285
SmlI CTYRAG 1 cut(s) 1025
SmoI CTYRAG 1 cut(s) 1025
Sse8387I CCTGCAGG 1 cut(s) 552
SsiI CCGC 1 cut(s) 1051
SspMI CTAG 4 cut(s) 339, 719, 797, 1253
StyD4I CCNGG 2 cut(s) 908, 918
TaaI ACNGT 6 cut(s) 35, 439, 904, 1045, 1317, 1476
TaiI ACGT 2 cut(s) 1428, 1510
TaqI TCGA 4 cut(s) 288, 348, 849, 1047
TaqII GACCGA 1 cut(s) 868
TatI WGTACW 1 cut(s) 1348
TauI GCSGC 1 cut(s) 1054
TfiI GAWTC 1 cut(s) 65
Tru1I TTAA 2 cut(s) 861, 1091
Tru9I TTAA 2 cut(s) 861, 1091
TscAI CASTG 4 cut(s) 40, 457, 993, 1125
TseFI GTSAC 1 cut(s) 1120
TseI GCWGC 2 cut(s) 524, 755
Tsp45I GTSAC 1 cut(s) 1120
TspDTI ATGAA 7 cut(s) 56, 57, 146, 227, 345, 1295, 1410
TspGWI ACGGA 1 cut(s) 381
TspRI CASTG 4 cut(s) 40, 457, 993, 1125
Tth111I GACNNNGTC 1 cut(s) 189
VpaK11BI GGWCC 1 cut(s) 764
XapI RAATTY 3 cut(s) 82, 153, 1171
XbaI TCTAGA 2 cut(s) 796, 1252
XceI RCATGY 1 cut(s) 1331
XmiI GTMKAC 1 cut(s) 228
XmnI GAANNNNTTC 1 cut(s) 1329
XspI CTAG 4 cut(s) 339, 719, 797, 1253
ZrmI AGTACT 1 cut(s) 1350
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.