Rw4G011950

Enhancer of mRNA-decapping protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000324
Physical Location & Seq
Reverse (-)
28176136 .. 28179137
3002 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G011950.1

Sequence Viewer

Length: 1317 bp
ATGGCGGCCGAACCTGCCCATGAGAGTGGCATGCCGATGGCTTTCCCCTGCGAATTGATGAATTCGATGAATTTGGAAGTTAAGGTTGTGGGTGAAGCCAGATCTACTCAAATTGATGAATTTGGCTTTCAACGAGAACTCCAAAATGCTGCTTCAGAATCTTATATTACAGATGAAGCTCGGCTAGTTGATGGTGCCAGCATGTCAGAACCACTAGCCCAGCCTCATTCTGGAGAGGAAGACCAGGATCGCTCTACAAAATATGTATCTGGGTCAGCTACCGCGACAACCACGTCACAACTACAAACACCAAATGCAAAGTCGAGAAAACGGAAATGGAAAAATGTGCAAGCATCAGGTCCATCTTCCCCATCACCAAGTGTGCTCAACTCAATAGAGCCCTCCAATGAAGCAGGTGGGAGTTCAAGTCCCCCCTCCGGAGAAGCTGCATTTCCTCAAATTATGGCCATGCAGGATATGATGAATCAGCTAATGACTATGCAAAAAGAATTGCAAAAGCAGATGACAATGATGGTTCCTGTCCCAATTACAAATGAAGGCAAACGATTAGAGTCGGCTCTCGGTCGGAGAATGGAGAAGGCTGTAAAGGCCAATAATATTGCTTTGAGGGCTCTGTCTCAAGAAGAGAATGCAAAGAATGAGAAATTATTGCGAGACCGTACTCAACAAGTAACTGGTTTGATTGTGAATAAGGACTTTCCAGTCATGTTAGAGAAAATGGTAAAAAATGAAATAGCTGCTGTTGGACCAGCTGTTGTTCGTGCGATCACTCCAGCTACGGAGAAAACAATACCTTTGGTTATATCTGATTGCTTTCAGAGAGGAGTGGGAGATAAAGCAGTTAATCAATTGGAAAAATCAGCTAACTCAAAACTTGAAGCTACTGTATCCAGGCAAATCGAGGCGCAGTTTCAAACATCGGGTAAACAAGCTCTTCAGGATGCTCTCAAGTCTAGCATGGAAGCTTCAGTGGTACCTGCCTTTGATAAGTCATGTAAGGCCATGTTTGAGCAAGTAGATGCCACATTCCAGAAAGTAATGGTTGAACATGCAACTGTGGCTCAGCAGCATTTTGAGTCTGCACATTCACCGTTGGCCCATGCTTTAAGGGAAGCTATTAGCTCTGCATCATCAGTGACTCAAACCCTAAGCAGAGAACTGGCTGATGGTCAACGCAAGTTAGTAGCTCTTGCAGCTGCACGGGGAAACTCTAGTGTAGTAAATCCTGACTGTTGTTCCGCCATCAAGTTGTTGCTTGAAATCAACCGAACACTACCTAGATTTCTTCACTGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000932 GO:0000956 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009892 GO:0009933 GO:0009965 GO:0009987 GO:0010014 GO:0010015 GO:0010016 GO:0010033 GO:0010071 GO:0010072 GO:0010154 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022414 GO:0022622 GO:0023052 GO:0031086 GO:0031087 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0046983 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048508 GO:0048519 GO:0048532 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0090304 GO:0090305 GO:0090421 GO:0097159 GO:0099402 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1905392 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Ge1_WD40

Protein Analysis

438

Amino Acids

47.59

Weight (kDa)

6.44

Isoelectric Point (pI)

47.37

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000324)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13290 AT3G13300 AT3G13300 AT3G13300
fragaria_vesca FvH4_3g41972 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g42780 FvH4_3g42790 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_4g01881 FvH4_7g10420
malus_domestica MD00G1013700.v1.1 MD03G1039800.v1.1 MD11G1041300.v1.1 MD11G1094900.v1.1
prunus_persica Prupe.6G032100_v2.0.a1
pyrus_communis pycom03g03070 pycom11g03500 pycom11g08470 pycom12g06730
rosa_chinensis RchiOBHm_Chr1g0328831 RchiOBHm_Chr4g0386471 RchiOBHm_Chr4g0386481 RchiOBHm_Chr4g0386551 RchiOBHm_Chr4g0386701 RchiOBHm_Chr4g0386801 RchiOBHm_Chr4g0386811 RchiOBHm_Chr4g0386821 RchiOBHm_Chr4g0386921 RchiOBHm_Chr4g0386931 RchiOBHm_Chr4g0386941 RchiOBHm_Chr4g0387211 RchiOBHm_Chr4g0389101 RchiOBHm_Chr4g0389111 RchiOBHm_Chr4g0389201 RchiOBHm_Chr4g0389211 RchiOBHm_Chr4g0389321 RchiOBHm_Chr4g0389331 RchiOBHm_Chr4g0389341 RchiOBHm_Chr4g0389411 RchiOBHm_Chr5g0075171
rosa_laevigata RLG00000009985 RLG00000009990 RLG00000009996 RLG00000009998 RLG00000010136 RLG00000010140 RLG00000036537
rosa_multiflora Rmu_co8461959.1_g000001 Rmu_sc0000013.1_g000017 Rmu_sc0000013.1_g000024 Rmu_sc0001015.1_g000001 Rmu_sc0001395.1_g000004 Rmu_sc0001942.1_g000022 Rmu_sc0002498.1_g000018 Rmu_sc0002498.1_g000020 Rmu_sc0002557.1_g000005 Rmu_sc0002604.1_g000010 Rmu_sc0002604.1_g000011 Rmu_sc0004750.1_g000003 Rmu_sc0006571.1_g000001 Rmu_sc0006571.1_g000014 Rmu_sc0006571.1_g000018 Rmu_sc0008050.1_g000016 Rmu_sc0008066.1_g000009 Rmu_sc0008380.1_g000006 Rmu_sc0008380.1_g000010 Rmu_sc0008380.1_g000012 Rmu_sc0010272.1_g000021 Rmu_sc0010693.1_g000010 Rmu_sc0010693.1_g000012 Rmu_sc0010693.1_g000014 Rmu_sc0010693.1_g000015 Rmu_sc0031790.1_g000003 Rmu_sc0040539.1_g000001 Rmu_ssc0000211.1_g000001 Rmu_ssc0000211.1_g000011 Rmu_ssc0000211.1_g000013
rosa_roxburghii Rroxscaffold_1G00006420 Rroxscaffold_1G00006430 Rroxscaffold_5G00334020 Rroxscaffold_5G00334050 Rroxscaffold_5G00335420
rosa_rugosa Rorug03G0307600 Rorug03G0308600 Rorug03G0322400 Rorug05G0437200 Rorug05G0437200 Rorug05G0437200
rosa_samantha Rh1BG075700 Rh4BG010000 Rh4BG010100 Rh4BG010200 Rh4BG020000 Rh4BG020400 Rh4BG172100 Rh4CG015300 Rh4CG016300 Rh5AG494100 Rh5AG494200 Rh5BG515500 Rh5CG539300 Rh5DG528200
rosa_wichuraiana Rw4G000930 Rw4G001980 Rw4G001990 Rw4G011950 Rw5G045850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 404
AasI GACNNNNNNGTC 2 cut(s) 292, 722
Acc36I ACCTGC 3 cut(s) 22, 404, 1006
Acc65I GGTACC 1 cut(s) 994
AccB1I GGYRCC 2 cut(s) 194, 994
AccII CGCG 1 cut(s) 284
AccIII TCCGGA 1 cut(s) 437
AciI CCGC 3 cut(s) 5, 282, 1260
AclWI GGATC 1 cut(s) 255
AcoI YGGCCR 2 cut(s) 6, 465
AcsI RAATTY 3 cut(s) 61, 70, 119
AcuI CTGAAG 3 cut(s) 138, 941, 972
AdeI CACNNNGTG 1 cut(s) 380
AfaI GTAC 2 cut(s) 682, 996
AfiI CCNNNNNNNGG 2 cut(s) 230, 437
AgsI TTSAA 6 cut(s) 131, 426, 899, 935, 1067, 1280
AjiI CACGTC 1 cut(s) 294
AjnI CCWGG 2 cut(s) 243, 911
Alw21I GWGCWC 1 cut(s) 387
Alw26I GTCTC 2 cut(s) 642, 669
AlwI GGATC 1 cut(s) 255
Aor13HI TCCGGA 1 cut(s) 437
AoxI GGCC 5 cut(s) 6, 465, 609, 1020, 1116
ApeKI GCWGC 6 cut(s) 149, 446, 758, 1087, 1214, 1217
ApoI RAATTY 3 cut(s) 61, 70, 119
ArsI GACNNNNNNTTYG 2 cut(s) 305, 337
Asp718I GGTACC 1 cut(s) 994
AspLEI GCGC 1 cut(s) 928
AspS9I GGNCC 3 cut(s) 359, 767, 1117
AsuHPI GGTGA 3 cut(s) 104, 366, 1101
AvaII GGWCC 2 cut(s) 359, 767
BalI TGGCCA 1 cut(s) 467
BanI GGYRCC 2 cut(s) 194, 994
BanII GRGCYC 2 cut(s) 402, 634
BbsI GAAGAC 1 cut(s) 246
Bbv12I GWGCWC 1 cut(s) 387
BbvI GCAGC 6 cut(s) 136, 433, 745, 1099, 1204, 1226
BccI CCATC 7 cut(s) 31, 185, 370, 379, 526, 1181, 1271
BciT130I CCWGG 2 cut(s) 245, 913
BciVI GTATCC 1 cut(s) 919
BcoDI GTCTC 2 cut(s) 642, 669
BfaI CTAG 5 cut(s) 185, 215, 975, 1233, 1299
BfuAI ACCTGC 3 cut(s) 22, 404, 1006
BfuI GTATCC 1 cut(s) 919
BglII AGATCT 1 cut(s) 101
BisI GCNGC 7 cut(s) 6, 150, 447, 759, 1088, 1215, 1218
BlpI GCTNAGC 1 cut(s) 1083
BlsI GCNGC 7 cut(s) 7, 151, 448, 760, 1089, 1216, 1219
Bme1390I CCNGG 2 cut(s) 245, 913
Bme18I GGWCC 2 cut(s) 359, 767
BmgBI CACGTC 1 cut(s) 294
BmgT120I GGNCC 3 cut(s) 359, 767, 1117
BmiI GGNNCC 3 cut(s) 196, 537, 996
BmrFI CCNGG 2 cut(s) 245, 913
BmsI GCATC 4 cut(s) 362, 952, 1030, 1157
BpiI GAAGAC 1 cut(s) 246
BpmI CTGGAG 2 cut(s) 252, 777
Bpu10I CCTNAGC 1 cut(s) 1169
Bpu1102I GCTNAGC 1 cut(s) 1083
BpuEI CTTGAG 2 cut(s) 624, 953
BsaI GGTCTC 1 cut(s) 669
BsaWI WCCGGW 1 cut(s) 437
BsaXI ACNNNNNCTCC 4 cut(s) 123, 153, 412, 442
Bsc4I CCNNNNNNNGG 2 cut(s) 230, 437
Bse1I ACTGG 4 cut(s) 700, 722, 1185, 1316
BseAI TCCGGA 1 cut(s) 437
BseBI CCWGG 2 cut(s) 245, 913
BseGI GGATG 1 cut(s) 967
BseLI CCNNNNNNNGG 2 cut(s) 230, 437
BseMII CTCAG 1 cut(s) 1097
BseNI ACTGG 4 cut(s) 700, 722, 1185, 1316
BseRI GAGGAG 1 cut(s) 858
BseX3I CGGCCG 1 cut(s) 6
BseXI GCAGC 6 cut(s) 136, 433, 745, 1099, 1204, 1226
BseYI CCCAGC 1 cut(s) 219
BsgI GTGCAG 2 cut(s) 1086, 1203
Bsh1236I CGCG 1 cut(s) 284
Bsh1285I CGRYCG 2 cut(s) 9, 586
BshFI GGCC 5 cut(s) 8, 467, 611, 1022, 1118
BshNI GGYRCC 2 cut(s) 194, 994
BsiEI CGRYCG 2 cut(s) 9, 586
BsiHKAI GWGCWC 1 cut(s) 387
BsiSI CCGG 1 cut(s) 438
BslFI GGGAC 2 cut(s) 414, 527
BslI CCNNNNNNNGG 2 cut(s) 230, 437
BsmAI GTCTC 2 cut(s) 642, 669
BsmFI GGGAC 2 cut(s) 414, 527
BsmI GAATGC 1 cut(s) 655
BsnI GGCC 5 cut(s) 8, 467, 611, 1022, 1118
Bso31I GGTCTC 1 cut(s) 669
Bsp1286I GDGCHC 3 cut(s) 387, 402, 634
Bsp13I TCCGGA 1 cut(s) 437
Bsp143I GATC 3 cut(s) 101, 247, 786
Bsp1720I GCTNAGC 1 cut(s) 1083
BspACI CCGC 3 cut(s) 5, 282, 1260
BspANI GGCC 5 cut(s) 8, 467, 611, 1022, 1118
BspCNI CTCAG 1 cut(s) 1096
BspEI TCCGGA 1 cut(s) 437
BspFNI CGCG 1 cut(s) 284
BspLI GGNNCC 3 cut(s) 196, 537, 996
BspMI ACCTGC 3 cut(s) 22, 404, 1006
BspPI GGATC 1 cut(s) 255
BspQI GCTCTTC 1 cut(s) 960
BspT107I GGYRCC 2 cut(s) 194, 994
BspTNI GGTCTC 1 cut(s) 669
BsrI ACTGG 4 cut(s) 700, 722, 1185, 1316
BssMI GATC 3 cut(s) 101, 247, 786
Bst2UI CCWGG 2 cut(s) 245, 913
Bst4CI ACNGT 5 cut(s) 680, 907, 1078, 1113, 1253
Bst6I CTCTTC 2 cut(s) 639, 960
BstC8I GCNNGC 3 cut(s) 32, 199, 351
BstDEI CTNAG 2 cut(s) 1083, 1169
BstF5I GGATG 1 cut(s) 967
BstFNI CGCG 1 cut(s) 284
BstHHI GCGC 1 cut(s) 928
BstKTI GATC 3 cut(s) 104, 250, 789
BstMAI GTCTC 2 cut(s) 642, 669
BstMBI GATC 3 cut(s) 101, 247, 786
BstMCI CGRYCG 2 cut(s) 9, 586
BstMWI GCNNNNNNNGC 5 cut(s) 14, 608, 629, 1079, 1214
BstNI CCWGG 2 cut(s) 245, 913
BstNSI RCATGY 3 cut(s) 34, 205, 1073
BstSCI CCNGG 2 cut(s) 243, 911
BstUI CGCG 1 cut(s) 284
BstV1I GCAGC 6 cut(s) 136, 433, 745, 1099, 1204, 1226
BstV2I GAAGAC 1 cut(s) 246
BstX2I RGATCY 1 cut(s) 101
BstXI CCANNNNNNTGG 1 cut(s) 26
BstYI RGATCY 1 cut(s) 101
BstZI CGGCCG 1 cut(s) 6
BsuI GTATCC 1 cut(s) 919
BsuRI GGCC 5 cut(s) 8, 467, 611, 1022, 1118
BtrI CACGTC 1 cut(s) 294
BtsCI GGATG 1 cut(s) 967
BtsIMutI CAGTG 3 cut(s) 996, 1161, 1309
BveI ACCTGC 3 cut(s) 22, 404, 1006
Cac8I GCNNGC 3 cut(s) 32, 199, 351
CfoI GCGC 1 cut(s) 928
Cfr13I GGNCC 3 cut(s) 359, 767, 1117
Csp6I GTAC 2 cut(s) 681, 995
CviQI GTAC 2 cut(s) 681, 995
DdeI CTNAG 2 cut(s) 1083, 1169
DpnI GATC 3 cut(s) 103, 249, 788
DpnII GATC 3 cut(s) 101, 247, 786
DraIII CACNNNGTG 1 cut(s) 380
DrdI GACNNNNNNGTC 2 cut(s) 292, 722
DseDI GACNNNNNNGTC 2 cut(s) 292, 722
EaeI YGGCCR 2 cut(s) 6, 465
EagI CGGCCG 1 cut(s) 6
Eam1104I CTCTTC 2 cut(s) 639, 960
EarI CTCTTC 2 cut(s) 639, 960
EciI GGCGGA 1 cut(s) 1249
EclXI CGGCCG 1 cut(s) 6
Eco24I GRGCYC 2 cut(s) 402, 634
Eco31I GGTCTC 1 cut(s) 669
Eco47I GGWCC 2 cut(s) 359, 767
Eco52I CGGCCG 1 cut(s) 6
Eco57I CTGAAG 3 cut(s) 138, 941, 972
EcoRI GAATTC 1 cut(s) 61
EcoRII CCWGG 2 cut(s) 243, 911
EcoT38I GRGCYC 2 cut(s) 402, 634
FaqI GGGAC 2 cut(s) 414, 527
Fnu4HI GCNGC 7 cut(s) 6, 150, 447, 759, 1088, 1215, 1218
FokI GGATG 1 cut(s) 974
FriOI GRGCYC 2 cut(s) 402, 634
Fsp4HI GCNGC 7 cut(s) 6, 150, 447, 759, 1088, 1215, 1218
FspBI CTAG 5 cut(s) 185, 215, 975, 1233, 1299
GlaI GCGC 1 cut(s) 927
GluI GCNGC 7 cut(s) 6, 150, 447, 759, 1088, 1215, 1218
GsaI CCCAGC 1 cut(s) 223
GsuI CTGGAG 2 cut(s) 252, 777
HaeIII GGCC 5 cut(s) 8, 467, 611, 1022, 1118
HapII CCGG 1 cut(s) 438
HhaI GCGC 1 cut(s) 928
Hin6I GCGC 1 cut(s) 926
HinP1I GCGC 1 cut(s) 926
HincII GTYRAC 1 cut(s) 1193
HindII GTYRAC 1 cut(s) 1193
HindIII AAGCTT 1 cut(s) 984
HinfI GANTC 5 cut(s) 158, 484, 572, 1097, 1159
HpaII CCGG 1 cut(s) 438
HphI GGTGA 3 cut(s) 104, 366, 1101
Hpy166II GTNNAC 2 cut(s) 947, 1193
Hpy188I TCNGA 5 cut(s) 157, 208, 588, 829, 840
Hpy188III TCNNGA 7 cut(s) 231, 324, 438, 641, 959, 1051, 1247
Hpy8I GTNNAC 2 cut(s) 947, 1193
HpyAV CCTTC 2 cut(s) 551, 592
HpyCH4III ACNGT 5 cut(s) 680, 907, 1078, 1113, 1253
HpyCH4IV ACGT 1 cut(s) 293
HpyF10VI GCNNNNNNNGC 5 cut(s) 14, 608, 629, 1079, 1214
HpyF3I CTNAG 2 cut(s) 1083, 1169
HpySE526I ACGT 1 cut(s) 293
HspAI GCGC 1 cut(s) 926
Kpn2I TCCGGA 1 cut(s) 437
KpnI GGTACC 1 cut(s) 998
Kzo9I GATC 3 cut(s) 101, 247, 786
LguI GCTCTTC 1 cut(s) 960
Lsp1109I GCAGC 6 cut(s) 136, 433, 745, 1099, 1204, 1226
LweI GCATC 4 cut(s) 362, 952, 1030, 1157
MaeI CTAG 5 cut(s) 185, 215, 975, 1233, 1299
MaeII ACGT 1 cut(s) 293
MaeIII GTNAC 3 cut(s) 294, 691, 1156
MalI GATC 3 cut(s) 103, 249, 788
MboI GATC 3 cut(s) 101, 247, 786
MboII GAAGA 5 cut(s) 251, 357, 656, 947, 1298
MfeI CAATTG 1 cut(s) 869
MflI RGATCY 1 cut(s) 101
MhlI GDGCHC 3 cut(s) 387, 402, 634
MlsI TGGCCA 1 cut(s) 467
MluNI TGGCCA 1 cut(s) 467
MlyI GAGTC 3 cut(s) 581, 1106, 1153
MmeI TCCRAC 2 cut(s) 566, 745
MnlI CCTC 8 cut(s) 229, 234, 412, 445, 465, 621, 836, 916
Mox20I TGGCCA 1 cut(s) 467
MroI TCCGGA 1 cut(s) 437
MscI TGGCCA 1 cut(s) 467
MseI TTAA 3 cut(s) 81, 864, 1127
MslI CAYNNNNRTG 2 cut(s) 24, 35
Msp20I TGGCCA 1 cut(s) 467
MspA1I CMGCKG 2 cut(s) 773, 1217
MspI CCGG 1 cut(s) 438
MspR9I CCNGG 2 cut(s) 245, 913
MunI CAATTG 1 cut(s) 869
Mva1269I GAATGC 1 cut(s) 655
MvaI CCWGG 2 cut(s) 245, 913
MvnI CGCG 1 cut(s) 284
MwoI GCNNNNNNNGC 5 cut(s) 14, 608, 629, 1079, 1214
NdeII GATC 3 cut(s) 101, 247, 786
NlaIV GGNNCC 3 cut(s) 196, 537, 996
NmeAIII GCCGAG 1 cut(s) 160
NmuCI GTSAC 2 cut(s) 294, 1156
NspI RCATGY 3 cut(s) 34, 205, 1073
PaeI GCATGC 1 cut(s) 34
PaqCI CACCTGC 1 cut(s) 404
PciSI GCTCTTC 1 cut(s) 960
PctI GAATGC 1 cut(s) 655
PfeI GAWTC 2 cut(s) 158, 484
PkrI GCNGC 7 cut(s) 7, 151, 448, 760, 1089, 1216, 1219
PleI GAGTC 3 cut(s) 580, 1105, 1153
PpsI GAGTC 3 cut(s) 580, 1105, 1153
Psp6I CCWGG 2 cut(s) 243, 911
PspFI CCCAGC 1 cut(s) 219
PspGI CCWGG 2 cut(s) 243, 911
PspN4I GGNNCC 3 cut(s) 196, 537, 996
PspPI GGNCC 3 cut(s) 359, 767, 1117
PsuI RGATCY 1 cut(s) 101
PvuII CAGCTG 2 cut(s) 773, 1217
RsaI GTAC 2 cut(s) 682, 996
RsaNI GTAC 2 cut(s) 681, 995
RseI CAYNNNNRTG 2 cut(s) 24, 35
SapI GCTCTTC 1 cut(s) 960
SaqAI TTAA 3 cut(s) 81, 864, 1127
SatI GCNGC 7 cut(s) 6, 150, 447, 759, 1088, 1215, 1218
Sau3AI GATC 3 cut(s) 101, 247, 786
Sau96I GGNCC 3 cut(s) 359, 767, 1117
SchI GAGTC 3 cut(s) 581, 1106, 1153
ScrFI CCNGG 2 cut(s) 245, 913
SduI GDGCHC 3 cut(s) 387, 402, 634
SfaNI GCATC 4 cut(s) 362, 952, 1030, 1157
SinI GGWCC 2 cut(s) 359, 767
SmiMI CAYNNNNRTG 2 cut(s) 24, 35
SmlI CTYRAG 2 cut(s) 639, 968
SmoI CTYRAG 2 cut(s) 639, 968
SphI GCATGC 1 cut(s) 34
SsiI CCGC 3 cut(s) 5, 282, 1260
SspI AATATT 1 cut(s) 619
SspMI CTAG 5 cut(s) 185, 215, 975, 1233, 1299
StyD4I CCNGG 2 cut(s) 243, 911
TaaI ACNGT 5 cut(s) 680, 907, 1078, 1113, 1253
TaiI ACGT 1 cut(s) 296
TaqI TCGA 3 cut(s) 65, 323, 921
TaqII GACCGA 1 cut(s) 572
TauI GCSGC 1 cut(s) 8
TfiI GAWTC 2 cut(s) 158, 484
Tru1I TTAA 3 cut(s) 81, 864, 1127
Tru9I TTAA 3 cut(s) 81, 864, 1127
TscAI CASTG 3 cut(s) 996, 1161, 1316
TseFI GTSAC 2 cut(s) 294, 1156
TseI GCWGC 6 cut(s) 149, 446, 758, 1087, 1214, 1217
Tsp45I GTSAC 2 cut(s) 294, 1156
TspDTI ATGAA 8 cut(s) 74, 83, 132, 189, 423, 497, 570, 765
TspGWI ACGGA 2 cut(s) 346, 815
TspRI CASTG 3 cut(s) 996, 1161, 1316
VpaK11BI GGWCC 2 cut(s) 359, 767
XapI RAATTY 3 cut(s) 61, 70, 119
XceI RCATGY 3 cut(s) 34, 205, 1073
XcmI CCANNNNNNNNNTGG 1 cut(s) 227
XspI CTAG 5 cut(s) 185, 215, 975, 1233, 1299
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.