Rh4BG020400

Enhancer of mRNA-decapping protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4B
OG0000324
Physical Location & Seq
Forward (+)
3155610 .. 3160740
5131 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4BG020400.1

Sequence Viewer

Length: 1542 bp
ATGCCTCCCTTCCCCGATCACTTTGCATCTTCATCTGCATCCACCTGTAATTTAGAGGAAGTAACAAGCAAACCTCGCCCCGGGGGGGGGGGGGAAGCATTTTTCCGCAGCTCCCATCACTCAACTACTACTCCACAGCTTCAACACCAAGAGGAACCAACTGACTTGTTAAGGCTTTCTCTGAACTCTTCAGAACCAACAAAACCTCGTGGCCCAGTTAAAGGCGATCAAGACCAGTGGCTGTCTTTCTGTGCTGCCAACACTGCCATCCACTTCAGAACTCTGAACCATCCACTTCAGAGTTTAGTCGAGACAGAGAGTCCAGATGAAGGAGGTACGCCACAAATTACAGGAAAGATTGTTATTGCCATTCAAATAGTTGGTGAGGGGGAAGCTGTTCATCCACGAGATGTTCTGGTTGTTGGGGTTGGGAAGTGTGTCCTACGAATTGATACTACTAAAGTTGCAAAGGGTGAAGTCCCTTCTGCTGAGGTTCCTATTAAGTGTCCTGTTGAAAAGCTCATTGATGGGGTCCAATTTGTTGGTAAACATGATGGAGAGGTGACAGATTTATCAATGTGCCAATGGATGACCACCCAGCTGGTTTCTGCTTCTATGGATGGAACTCTCCCAACAGGCCTGATCTCTACGGGGCCGCTTAATCGGGAAGTGAAGATCTGGTCCTCAGCGAGTGAAGAAGGCTGGCTACTTCCCAGTGATGCTGAGTCATGGAAATGTACCCAGACCTTAGAGTTAAAGGGCTCTGCTCAACCTCGAGTTGAGGATGCATTCTTTAATCAAGTCATAGCATTGTCACAAGCTGGCCTTCTTTTAGTTGCAAATGCTAAGAAGAATGCTATATATGCCGTGCACTTAGACCTTGGTGGTGAGCCAGCATCTACATGCATGGATTACAGAGCAGAATTTACAATGCTTATTTTGAGCTTTACTGGGACAAGTATATCACCTCATGGTTTAGAAAAGTTCTTTTGTTTCCAGGCATCCGATCTTGGAATTGAGATGGCCGGGGATTGCTGTGCAATATCATTAGAATCTTATATTACAGATGAAGCTTGGCAAGGTGATGGTGCCAGCATGTCAGAACCACTAGCCCAGCCTCATTCTGGAGAGGAAGACCACGATCGCTCTACAAAAAATATATCTGGGCCTGCTACCGCCACAACCGCATCACAACTACAAGCACCAAATGCAAAGTCGAGAAAACAGAAATGGAAAAATATGCAAGCATCAGGTCAATCTTCCCCATCACCAGGTGTGCTCAACTCAATAGAGCCCTCTAATGAAGCAGGTGGGAGTTCAAGTCCCCCCTCCGGAGAAGCTGCATTTCCTCAAATTATGGCCAGGCAGGATATGATGAATCAGCTAATGACTATGCAAAAAGAATTGCAAAAGCAGATGACAATGATGGTTACCGTCCCAATTACTAAGGAAGGCAAACGATTAGAGGCTGCTCTCGGTCGGAGTATGGAGAAGGCTGTAAAGGCCAATAATTTGCTTTGTGGGCTTGGTTTCAAGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000932 GO:0000956 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009892 GO:0009933 GO:0009965 GO:0009987 GO:0010014 GO:0010015 GO:0010016 GO:0010033 GO:0010071 GO:0010072 GO:0010154 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022414 GO:0022622 GO:0023052 GO:0031086 GO:0031087 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0046983 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048508 GO:0048519 GO:0048532 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0090304 GO:0090305 GO:0090421 GO:0097159 GO:0099402 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1905392 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Ge1_WD40

Protein Analysis

513

Amino Acids

55.08

Weight (kDa)

5.34

Isoelectric Point (pI)

45.19

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000324)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13290 AT3G13300 AT3G13300 AT3G13300
fragaria_vesca FvH4_3g41972 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g42780 FvH4_3g42790 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_4g01881 FvH4_7g10420
malus_domestica MD00G1013700.v1.1 MD03G1039800.v1.1 MD11G1041300.v1.1 MD11G1094900.v1.1
prunus_persica Prupe.6G032100_v2.0.a1
pyrus_communis pycom03g03070 pycom11g03500 pycom11g08470 pycom12g06730
rosa_chinensis RchiOBHm_Chr1g0328831 RchiOBHm_Chr4g0386471 RchiOBHm_Chr4g0386481 RchiOBHm_Chr4g0386551 RchiOBHm_Chr4g0386701 RchiOBHm_Chr4g0386801 RchiOBHm_Chr4g0386811 RchiOBHm_Chr4g0386821 RchiOBHm_Chr4g0386921 RchiOBHm_Chr4g0386931 RchiOBHm_Chr4g0386941 RchiOBHm_Chr4g0387211 RchiOBHm_Chr4g0389101 RchiOBHm_Chr4g0389111 RchiOBHm_Chr4g0389201 RchiOBHm_Chr4g0389211 RchiOBHm_Chr4g0389321 RchiOBHm_Chr4g0389331 RchiOBHm_Chr4g0389341 RchiOBHm_Chr4g0389411 RchiOBHm_Chr5g0075171
rosa_laevigata RLG00000009985 RLG00000009990 RLG00000009996 RLG00000009998 RLG00000010136 RLG00000010140 RLG00000036537
rosa_multiflora Rmu_co8461959.1_g000001 Rmu_sc0000013.1_g000017 Rmu_sc0000013.1_g000024 Rmu_sc0001015.1_g000001 Rmu_sc0001395.1_g000004 Rmu_sc0001942.1_g000022 Rmu_sc0002498.1_g000018 Rmu_sc0002498.1_g000020 Rmu_sc0002557.1_g000005 Rmu_sc0002604.1_g000010 Rmu_sc0002604.1_g000011 Rmu_sc0004750.1_g000003 Rmu_sc0006571.1_g000001 Rmu_sc0006571.1_g000014 Rmu_sc0006571.1_g000018 Rmu_sc0008050.1_g000016 Rmu_sc0008066.1_g000009 Rmu_sc0008380.1_g000006 Rmu_sc0008380.1_g000010 Rmu_sc0008380.1_g000012 Rmu_sc0010272.1_g000021 Rmu_sc0010693.1_g000010 Rmu_sc0010693.1_g000012 Rmu_sc0010693.1_g000014 Rmu_sc0010693.1_g000015 Rmu_sc0031790.1_g000003 Rmu_sc0040539.1_g000001 Rmu_ssc0000211.1_g000001 Rmu_ssc0000211.1_g000011 Rmu_ssc0000211.1_g000013
rosa_roxburghii Rroxscaffold_1G00006420 Rroxscaffold_1G00006430 Rroxscaffold_5G00334020 Rroxscaffold_5G00334050 Rroxscaffold_5G00335420
rosa_rugosa Rorug03G0307600 Rorug03G0308600 Rorug03G0322400 Rorug05G0437200 Rorug05G0437200 Rorug05G0437200
rosa_samantha Rh1BG075700 Rh4BG010000 Rh4BG010100 Rh4BG010200 Rh4BG020000 Rh4BG020400 Rh4BG172100 Rh4CG015300 Rh4CG016300 Rh5AG494100 Rh5AG494200 Rh5BG515500 Rh5CG539300 Rh5DG528200
rosa_wichuraiana Rw4G000930 Rw4G001980 Rw4G001990 Rw4G011950 Rw5G045850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1298
Acc36I ACCTGC 1 cut(s) 1298
AccB1I GGYRCC 1 cut(s) 1088
AccIII TCCGGA 1 cut(s) 1331
AciI CCGC 4 cut(s) 106, 656, 1176, 1185
AcoI YGGCCR 2 cut(s) 1023, 1359
AcsI RAATTY 1 cut(s) 923
AcuI CTGAAG 3 cut(s) 174, 259, 281
AdeI CACNNNGTG 1 cut(s) 1274
AfaI GTAC 2 cut(s) 337, 739
AfiI CCNNNNNNNGG 9 cut(s) 80, 85, 86, 87, 221, 329, 1124, 1271, 1331
AgsI TTSAA 5 cut(s) 143, 374, 515, 1320, 1534
AhdI GACNNNNNGTC 1 cut(s) 318
AjnI CCWGG 3 cut(s) 996, 1270, 1361
Alw21I GWGCWC 2 cut(s) 873, 1281
Alw26I GTCTC 1 cut(s) 305
Alw44I GTGCAC 1 cut(s) 869
AlwNI CAGNNNCTG 1 cut(s) 241
Ama87I CYCGRG 2 cut(s) 80, 774
Aor13HI TCCGGA 1 cut(s) 1331
AoxI GGCC 8 cut(s) 211, 637, 653, 823, 1023, 1166, 1359, 1503
ApaLI GTGCAC 1 cut(s) 869
ApeKI GCWGC 4 cut(s) 108, 254, 1340, 1469
ApoI RAATTY 1 cut(s) 923
ArsI GACNNNNNNTTYG 2 cut(s) 1199, 1231
Asp700I GAANNNNTTC 1 cut(s) 396
AspS9I GGNCC 5 cut(s) 212, 532, 653, 681, 1166
AsuC2I CCSGG 3 cut(s) 81, 82, 1027
AsuHPI GGTGA 7 cut(s) 395, 485, 574, 899, 957, 1094, 1260
AvaI CYCGRG 2 cut(s) 80, 774
AvaII GGWCC 2 cut(s) 532, 681
BaeGI GKGCMC 1 cut(s) 873
BalI TGGCCA 1 cut(s) 1361
BanI GGYRCC 1 cut(s) 1088
BanII GRGCYC 2 cut(s) 764, 1296
BarI GAAGNNNNNNTAC 2 cut(s) 690, 722
BauI CACGAG 2 cut(s) 207, 405
BbsI GAAGAC 1 cut(s) 1140
Bbv12I GWGCWC 2 cut(s) 873, 1281
BbvCI CCTCAGC 2 cut(s) 489, 685
BbvI GCAGC 4 cut(s) 120, 241, 1327, 1456
BceAI ACGGC 1 cut(s) 851
BcgI CGANNNNNNTGC 2 cut(s) 5, 39
BciT130I CCWGG 3 cut(s) 998, 1272, 1363
BcnI CCSGG 3 cut(s) 81, 82, 1027
BcoDI GTCTC 1 cut(s) 305
BfaI CTAG 1 cut(s) 1109
BfuAI ACCTGC 1 cut(s) 1298
BglII AGATCT 1 cut(s) 675
BisI GCNGC 5 cut(s) 109, 255, 656, 1341, 1470
BlsI GCNGC 5 cut(s) 110, 256, 657, 1342, 1471
Bme1390I CCNGG 6 cut(s) 81, 82, 998, 1027, 1272, 1363
Bme18I GGWCC 2 cut(s) 532, 681
BmeRI GACNNNNNGTC 1 cut(s) 318
BmeT110I CYCGRG 2 cut(s) 80, 774
BmgT120I GGNCC 5 cut(s) 212, 532, 653, 681, 1166
BmiI GGNNCC 5 cut(s) 156, 495, 533, 654, 1090
BmrFI CCNGG 6 cut(s) 81, 82, 998, 1027, 1272, 1363
BmrI ACTGGG 3 cut(s) 209, 708, 960
BmsI GCATC 8 cut(s) 35, 47, 709, 775, 905, 1010, 1196, 1256
BmuI ACTGGG 3 cut(s) 209, 708, 960
BpiI GAAGAC 1 cut(s) 1140
BpmI CTGGAG 1 cut(s) 1146
Bpu10I CCTNAGC 2 cut(s) 489, 685
BpuMI CCSGG 3 cut(s) 81, 82, 1027
BsaJI CCNNGG 5 cut(s) 79, 80, 81, 880, 1026
BsaWI WCCGGW 1 cut(s) 1331
BsaXI ACNNNNNCTCC 4 cut(s) 115, 145, 1306, 1336
Bsc4I CCNNNNNNNGG 9 cut(s) 80, 85, 86, 87, 221, 329, 1124, 1271, 1331
Bse1I ACTGG 4 cut(s) 215, 235, 714, 955
BseAI TCCGGA 1 cut(s) 1331
BseBI CCWGG 3 cut(s) 998, 1272, 1363
BseDI CCNNGG 5 cut(s) 79, 80, 81, 880, 1026
BseGI GGATG 8 cut(s) 38, 267, 289, 400, 594, 625, 790, 1001
BseLI CCNNNNNNNGG 9 cut(s) 80, 85, 86, 87, 221, 329, 1124, 1271, 1331
BseMII CTCAG 3 cut(s) 480, 699, 714
BseNI ACTGG 4 cut(s) 215, 235, 714, 955
BseSI GKGCMC 1 cut(s) 873
BseXI GCAGC 4 cut(s) 120, 241, 1327, 1456
BseYI CCCAGC 2 cut(s) 597, 1113
Bsh1285I CGRYCG 2 cut(s) 1144, 1480
BshFI GGCC 8 cut(s) 213, 639, 655, 825, 1025, 1168, 1361, 1505
BshNI GGYRCC 1 cut(s) 1088
BsiEI CGRYCG 2 cut(s) 1144, 1480
BsiHKAI GWGCWC 2 cut(s) 873, 1281
BsiHKCI CYCGRG 2 cut(s) 80, 774
BsiSI CCGG 3 cut(s) 81, 1026, 1332
BslFI GGGAC 4 cut(s) 464, 967, 1308, 1421
BslI CCNNNNNNNGG 9 cut(s) 80, 85, 86, 87, 221, 329, 1124, 1271, 1331
BsmAI GTCTC 1 cut(s) 305
BsmFI GGGAC 4 cut(s) 464, 967, 1308, 1421
BsmI GAATGC 2 cut(s) 788, 859
BsnI GGCC 8 cut(s) 213, 639, 655, 825, 1025, 1168, 1361, 1505
BsoBI CYCGRG 2 cut(s) 80, 774
Bsp1286I GDGCHC 4 cut(s) 764, 873, 1281, 1296
Bsp13I TCCGGA 1 cut(s) 1331
Bsp143I GATC 6 cut(s) 16, 226, 642, 675, 1006, 1141
BspACI CCGC 4 cut(s) 106, 656, 1176, 1185
BspANI GGCC 8 cut(s) 213, 639, 655, 825, 1025, 1168, 1361, 1505
BspCNI CTCAG 3 cut(s) 481, 698, 715
BspEI TCCGGA 1 cut(s) 1331
BspLI GGNNCC 5 cut(s) 156, 495, 533, 654, 1090
BspMI ACCTGC 1 cut(s) 1298
BspT107I GGYRCC 1 cut(s) 1088
BsrI ACTGG 4 cut(s) 215, 235, 714, 955
BssECI CCNNGG 5 cut(s) 79, 80, 81, 880, 1026
BssMI GATC 6 cut(s) 16, 226, 642, 675, 1006, 1141
BssSI CACGAG 2 cut(s) 207, 405
BssT1I CCWWGG 1 cut(s) 880
Bst2BI CACGAG 2 cut(s) 207, 405
Bst2UI CCWGG 3 cut(s) 998, 1272, 1363
Bst4CI ACNGT 1 cut(s) 1435
Bst6I CTCTTC 1 cut(s) 193
BstAPI GCANNNNNTGC 1 cut(s) 1208
BstC8I GCNNGC 6 cut(s) 704, 823, 894, 1093, 1170, 1245
BstDEI CTNAG 7 cut(s) 489, 685, 723, 748, 846, 874, 1446
BstEII GGTNACC 1 cut(s) 1429
BstF5I GGATG 8 cut(s) 38, 267, 289, 400, 594, 625, 790, 1001
BstKTI GATC 6 cut(s) 19, 229, 645, 678, 1009, 1144
BstMAI GTCTC 1 cut(s) 305
BstMBI GATC 6 cut(s) 16, 226, 642, 675, 1006, 1141
BstMCI CGRYCG 2 cut(s) 1144, 1480
BstMWI GCNNNNNNNGC 7 cut(s) 75, 263, 863, 1184, 1208, 1502, 1522
BstNI CCWGG 3 cut(s) 998, 1272, 1363
BstNSI RCATGY 2 cut(s) 906, 1099
BstPI GGTNACC 1 cut(s) 1429
BstSCI CCNGG 6 cut(s) 79, 80, 996, 1025, 1270, 1361
BstSLI GKGCMC 1 cut(s) 873
BstV1I GCAGC 4 cut(s) 120, 241, 1327, 1456
BstV2I GAAGAC 1 cut(s) 1140
BstX2I RGATCY 1 cut(s) 675
BstXI CCANNNNNNTGG 2 cut(s) 542, 601
BstYI RGATCY 1 cut(s) 675
BsuRI GGCC 8 cut(s) 213, 639, 655, 825, 1025, 1168, 1361, 1505
BtsCI GGATG 8 cut(s) 38, 267, 289, 400, 594, 625, 790, 1001
BtsI GCAGTG 1 cut(s) 261
BtsIMutI CAGTG 3 cut(s) 242, 261, 721
BveI ACCTGC 1 cut(s) 1298
Cac8I GCNNGC 6 cut(s) 704, 823, 894, 1093, 1170, 1245
CaiI CAGNNNCTG 1 cut(s) 241
Cfr13I GGNCC 5 cut(s) 212, 532, 653, 681, 1166
Cfr9I CCCGGG 1 cut(s) 80
CsiI ACCWGGT 1 cut(s) 1270
Csp6I GTAC 2 cut(s) 336, 738
CspCI CAANNNNNGTGG 2 cut(s) 218, 253
CviAII CATG 6 cut(s) 551, 729, 903, 907, 971, 1096
CviQI GTAC 2 cut(s) 336, 738
DdeI CTNAG 7 cut(s) 489, 685, 723, 748, 846, 874, 1446
DpnI GATC 6 cut(s) 18, 228, 644, 677, 1008, 1143
DpnII GATC 6 cut(s) 16, 226, 642, 675, 1006, 1141
DraIII CACNNNGTG 1 cut(s) 1274
DriI GACNNNNNGTC 1 cut(s) 318
EaeI YGGCCR 2 cut(s) 1023, 1359
Eam1104I CTCTTC 1 cut(s) 193
Eam1105I GACNNNNNGTC 1 cut(s) 318
EarI CTCTTC 1 cut(s) 193
Eco130I CCWWGG 1 cut(s) 880
Eco147I AGGCCT 1 cut(s) 639
Eco24I GRGCYC 2 cut(s) 764, 1296
Eco47I GGWCC 2 cut(s) 532, 681
Eco57I CTGAAG 3 cut(s) 174, 259, 281
Eco88I CYCGRG 2 cut(s) 80, 774
Eco91I GGTNACC 1 cut(s) 1429
EcoO65I GGTNACC 1 cut(s) 1429
EcoRII CCWGG 3 cut(s) 996, 1270, 1361
EcoT14I CCWWGG 1 cut(s) 880
EcoT22I ATGCAT 2 cut(s) 790, 908
EcoT38I GRGCYC 2 cut(s) 764, 1296
ErhI CCWWGG 1 cut(s) 880
FaeI CATG 6 cut(s) 554, 732, 906, 910, 974, 1099
FalI AAGNNNNNCTT 2 cut(s) 810, 842
FaqI GGGAC 4 cut(s) 464, 967, 1308, 1421
FatI CATG 6 cut(s) 550, 728, 902, 906, 970, 1095
Fnu4HI GCNGC 5 cut(s) 109, 255, 656, 1341, 1470
FokI GGATG 8 cut(s) 25, 254, 276, 387, 601, 632, 797, 988
FriOI GRGCYC 2 cut(s) 764, 1296
Fsp4HI GCNGC 5 cut(s) 109, 255, 656, 1341, 1470
FspBI CTAG 1 cut(s) 1109
GluI GCNGC 5 cut(s) 109, 255, 656, 1341, 1470
GsaI CCCAGC 2 cut(s) 601, 1117
GsuI CTGGAG 1 cut(s) 1146
HaeIII GGCC 8 cut(s) 213, 639, 655, 825, 1025, 1168, 1361, 1505
HapII CCGG 3 cut(s) 81, 1026, 1332
Hin1II CATG 6 cut(s) 554, 732, 906, 910, 974, 1099
HindIII AAGCTT 1 cut(s) 1071
HinfI GANTC 4 cut(s) 319, 725, 1052, 1378
HpaII CCGG 3 cut(s) 81, 1026, 1332
HphI GGTGA 7 cut(s) 395, 485, 574, 899, 957, 1094, 1260
Hpy166II GTNNAC 2 cut(s) 548, 871
Hpy188I TCNGA 8 cut(s) 183, 193, 278, 285, 300, 1006, 1102, 1482
Hpy188III TCNNGA 8 cut(s) 230, 310, 323, 665, 1125, 1218, 1332, 1534
Hpy8I GTNNAC 2 cut(s) 548, 871
HpyAV CCTTC 7 cut(s) 19, 323, 492, 692, 836, 1445, 1486
HpyCH4III ACNGT 1 cut(s) 1435
HpyF10VI GCNNNNNNNGC 7 cut(s) 75, 263, 863, 1184, 1208, 1502, 1522
HpyF3I CTNAG 7 cut(s) 489, 685, 723, 748, 846, 874, 1446
Hsp92II CATG 6 cut(s) 554, 732, 906, 910, 974, 1099
Kpn2I TCCGGA 1 cut(s) 1331
Kzo9I GATC 6 cut(s) 16, 226, 642, 675, 1006, 1141
LmnI GCTCC 1 cut(s) 116
Lsp1109I GCAGC 4 cut(s) 120, 241, 1327, 1456
LweI GCATC 8 cut(s) 35, 47, 709, 775, 905, 1010, 1196, 1256
MabI ACCWGGT 1 cut(s) 1270
MaeI CTAG 1 cut(s) 1109
MaeIII GTNAC 4 cut(s) 61, 562, 813, 1429
MalI GATC 6 cut(s) 18, 228, 644, 677, 1008, 1143
MboI GATC 6 cut(s) 16, 226, 642, 675, 1006, 1141
MboII GAAGA 7 cut(s) 21, 180, 685, 707, 862, 1145, 1251
MflI RGATCY 1 cut(s) 675
MhlI GDGCHC 4 cut(s) 764, 873, 1281, 1296
MlsI TGGCCA 1 cut(s) 1361
MluNI TGGCCA 1 cut(s) 1361
MlyI GAGTC 2 cut(s) 328, 734
MmeI TCCRAC 1 cut(s) 1460
Mox20I TGGCCA 1 cut(s) 1361
Mph1103I ATGCAT 2 cut(s) 790, 908
MroI TCCGGA 1 cut(s) 1331
MroXI GAANNNNTTC 1 cut(s) 396
MscI TGGCCA 1 cut(s) 1361
MseI TTAA 6 cut(s) 170, 219, 501, 660, 755, 795
MslI CAYNNNNRTG 2 cut(s) 733, 901
Msp20I TGGCCA 1 cut(s) 1361
MspA1I CMGCKG 1 cut(s) 601
MspI CCGG 3 cut(s) 81, 1026, 1332
MspR9I CCNGG 6 cut(s) 81, 82, 998, 1027, 1272, 1363
Mva1269I GAATGC 2 cut(s) 788, 859
MvaI CCWGG 3 cut(s) 998, 1272, 1363
MwoI GCNNNNNNNGC 7 cut(s) 75, 263, 863, 1184, 1208, 1502, 1522
NciI CCSGG 3 cut(s) 81, 82, 1027
NdeII GATC 6 cut(s) 16, 226, 642, 675, 1006, 1141
NlaIII CATG 6 cut(s) 554, 732, 906, 910, 974, 1099
NlaIV GGNNCC 5 cut(s) 156, 495, 533, 654, 1090
NmuCI GTSAC 2 cut(s) 562, 813
NsiI ATGCAT 2 cut(s) 790, 908
NspI RCATGY 2 cut(s) 906, 1099
PaeR7I CTCGAG 1 cut(s) 774
PaqCI CACCTGC 1 cut(s) 1298
PceI AGGCCT 1 cut(s) 639
PctI GAATGC 2 cut(s) 788, 859
PdmI GAANNNNTTC 1 cut(s) 396
PfeI GAWTC 2 cut(s) 1052, 1378
PkrI GCNGC 5 cut(s) 110, 256, 657, 1342, 1471
Ple19I CGATCG 1 cut(s) 1144
PleI GAGTC 2 cut(s) 327, 733
PpsI GAGTC 2 cut(s) 327, 733
Psp6I CCWGG 3 cut(s) 996, 1270, 1361
PspEI GGTNACC 1 cut(s) 1429
PspFI CCCAGC 2 cut(s) 597, 1113
PspGI CCWGG 3 cut(s) 996, 1270, 1361
PspN4I GGNNCC 5 cut(s) 156, 495, 533, 654, 1090
PspPI GGNCC 5 cut(s) 212, 532, 653, 681, 1166
PspXI VCTCGAGB 1 cut(s) 774
PstNI CAGNNNCTG 1 cut(s) 241
PsuI RGATCY 1 cut(s) 675
PvuI CGATCG 1 cut(s) 1144
PvuII CAGCTG 1 cut(s) 601
RsaI GTAC 2 cut(s) 337, 739
RsaNI GTAC 2 cut(s) 336, 738
RseI CAYNNNNRTG 2 cut(s) 733, 901
SaqAI TTAA 6 cut(s) 170, 219, 501, 660, 755, 795
SatI GCNGC 5 cut(s) 109, 255, 656, 1341, 1470
Sau3AI GATC 6 cut(s) 16, 226, 642, 675, 1006, 1141
Sau96I GGNCC 5 cut(s) 212, 532, 653, 681, 1166
SchI GAGTC 2 cut(s) 328, 734
ScrFI CCNGG 6 cut(s) 81, 82, 998, 1027, 1272, 1363
SduI GDGCHC 4 cut(s) 764, 873, 1281, 1296
SexAI ACCWGGT 1 cut(s) 1270
SfaNI GCATC 8 cut(s) 35, 47, 709, 775, 905, 1010, 1196, 1256
Sfr274I CTCGAG 1 cut(s) 774
SinI GGWCC 2 cut(s) 532, 681
SlaI CTCGAG 1 cut(s) 774
SmaI CCCGGG 1 cut(s) 82
SmiMI CAYNNNNRTG 2 cut(s) 733, 901
SmlI CTYRAG 1 cut(s) 774
SmoI CTYRAG 1 cut(s) 774
SseBI AGGCCT 1 cut(s) 639
SsiI CCGC 4 cut(s) 106, 656, 1176, 1185
SspMI CTAG 1 cut(s) 1109
StuI AGGCCT 1 cut(s) 639
StyD4I CCNGG 6 cut(s) 79, 80, 996, 1025, 1270, 1361
StyI CCWWGG 1 cut(s) 880
TaaI ACNGT 1 cut(s) 1435
TaqI TCGA 3 cut(s) 309, 775, 1217
TaqII GACCGA 1 cut(s) 1466
TauI GCSGC 1 cut(s) 658
TfiI GAWTC 2 cut(s) 1052, 1378
Tru1I TTAA 6 cut(s) 170, 219, 501, 660, 755, 795
Tru9I TTAA 6 cut(s) 170, 219, 501, 660, 755, 795
TscAI CASTG 3 cut(s) 242, 268, 721
TseFI GTSAC 2 cut(s) 562, 813
TseI GCWGC 4 cut(s) 108, 254, 1340, 1469
Tsp45I GTSAC 2 cut(s) 562, 813
TspDTI ATGAA 6 cut(s) 21, 342, 389, 1083, 1317, 1391
TspMI CCCGGG 1 cut(s) 80
TspRI CASTG 3 cut(s) 242, 268, 721
VneI GTGCAC 1 cut(s) 869
VpaK11BI GGWCC 2 cut(s) 532, 681
XapI RAATTY 1 cut(s) 923
XceI RCATGY 2 cut(s) 906, 1099
XcmI CCANNNNNNNNNTGG 1 cut(s) 1121
XhoI CTCGAG 1 cut(s) 774
XmaI CCCGGG 1 cut(s) 80
XmnI GAANNNNTTC 1 cut(s) 396
XspI CTAG 1 cut(s) 1109
Zsp2I ATGCAT 2 cut(s) 790, 908
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.