RchiOBHm_Chr4g0386941

Enhancer of mRNA-decapping protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000324
Physical Location & Seq
Reverse (-)
2261191 .. 2264076
2886 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36028

Sequence Viewer

Length: 1386 bp
ATGCCGATTCGAATTCCGAGCAATAAGCTACCGAAAGGCAGGCATTTAATTGGGGATAGCATGGTTTACGATGCGGGTGTTTGGTTGCCCGGGGAGTTTCAGCCGCAGCTAGAAGTTACGCCCATAGCTAATCGGGTTTTGAATATACACACTGCATTGAGATCGTTGTTTCGAGCTCATACACAGAGGGTCACAGACATGGCTTTCTTTGCCGAGGATGTTCACCTTTTGGCTAGGCAGCTCTTTTTCATTCCATGCTTAATACTTTTCTTCCTCTGGTTTGTTTTTGCAATATCTGACATCATTTTCTGCAGTGTCAGTGTAGAAGGACGGCTTTTTGTGTGGAAAATTTCTGAAGGTCCAGATGAAGAAGGTACGCCACAAATCACAGGAAAGATTGTTAGTGTCATTCAAATAATTGGTGAGGGGGAAGCTGTTCATCCACGAAAGGTTTTGGCTGTTGGGGTTGGGAAGTGTGTACTACGAATTGATACTACTAAAGTTGCAAAGGGTGAAGTCCCTTCTGCTAAGGATCCTATTAAGTGTCCTGTTGAAAAGCTTATTGATGGGCTCCAATTTGTTGGTAAAAATGATGGAGAGGTGACAGATTTATCAATGTGCCAATGGATGACCACCTGGCTGGTTTCTGCTTCTATGGATGGAACTATAAAGATCTGGGAAGATTGCAAGTCACAACCACTTGTAGTACTGAGACCCTATGATGGCCTTCCTGTTTATTCGTCTATATTTGGCCCACTTAATCGGGAAGTGAAGATCTGGTCCTCAGCGAGTGAAGAAGGCGGGCTGCTTCCCAGTGATGCTGAGTCATGGAAGTGTACCCAGACCTTAGATTTAAAGAGCTCTGCTCAATCTCGAGTTGAGGATGCATTCTTTAATCAAGTCATAGCATTGTCACAAGCTGGCCTTCTTTTACTTGCAAATGCTAAGAAGAATGCTATATATGCCATGCACTTAGACTTTGGTGGTGAGCCAGCATTTACAATGCCTATTATGAGGTTTACTGGGACAAATATATTACCTCATGGTGAAATCGTTCAGGTTTGTTGTGTCCAAACACAAGCCATTCAACGGTATGCTTTGGACTTATCCAAGTGGTTACCTCCCCCATTGGAGAATTCAGGTTTAGAAAAGTCAGATTCCAGTGTTTCACATGATGCAACTGAGGCGGTGTCAACTAATTCAGCATCGGAACCAACCATACAAGCTACTAGTTTTGAGGGTGCAGTTGCGTTGAGGTATCCTGTGTGCACTGGTTCGGTTGGTGCTGCCAATTCAAAAGATATTAGCATTTCGTCTATGGAATCAAAACCTGTTGCATCGCCACCGGAGACTAGTGATGCTGATGCTGGAGAGGAAGACCACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000932 GO:0000956 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009892 GO:0009933 GO:0009965 GO:0009987 GO:0010014 GO:0010015 GO:0010016 GO:0010033 GO:0010071 GO:0010072 GO:0010154 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022414 GO:0022622 GO:0023052 GO:0031086 GO:0031087 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0046983 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048508 GO:0048519 GO:0048532 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0090304 GO:0090305 GO:0090421 GO:0097159 GO:0099402 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1905392 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Ge1_WD40

Protein Analysis

461

Amino Acids

50.26

Weight (kDa)

5.12

Isoelectric Point (pI)

38.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000324)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13290 AT3G13300 AT3G13300 AT3G13300
fragaria_vesca FvH4_3g41972 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g42780 FvH4_3g42790 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_4g01881 FvH4_7g10420
malus_domestica MD00G1013700.v1.1 MD03G1039800.v1.1 MD11G1041300.v1.1 MD11G1094900.v1.1
prunus_persica Prupe.6G032100_v2.0.a1
pyrus_communis pycom03g03070 pycom11g03500 pycom11g08470 pycom12g06730
rosa_chinensis RchiOBHm_Chr1g0328831 RchiOBHm_Chr4g0386471 RchiOBHm_Chr4g0386481 RchiOBHm_Chr4g0386551 RchiOBHm_Chr4g0386701 RchiOBHm_Chr4g0386801 RchiOBHm_Chr4g0386811 RchiOBHm_Chr4g0386821 RchiOBHm_Chr4g0386921 RchiOBHm_Chr4g0386931 RchiOBHm_Chr4g0386941 RchiOBHm_Chr4g0387211 RchiOBHm_Chr4g0389101 RchiOBHm_Chr4g0389111 RchiOBHm_Chr4g0389201 RchiOBHm_Chr4g0389211 RchiOBHm_Chr4g0389321 RchiOBHm_Chr4g0389331 RchiOBHm_Chr4g0389341 RchiOBHm_Chr4g0389411 RchiOBHm_Chr5g0075171
rosa_laevigata RLG00000009985 RLG00000009990 RLG00000009996 RLG00000009998 RLG00000010136 RLG00000010140 RLG00000036537
rosa_multiflora Rmu_co8461959.1_g000001 Rmu_sc0000013.1_g000017 Rmu_sc0000013.1_g000024 Rmu_sc0001015.1_g000001 Rmu_sc0001395.1_g000004 Rmu_sc0001942.1_g000022 Rmu_sc0002498.1_g000018 Rmu_sc0002498.1_g000020 Rmu_sc0002557.1_g000005 Rmu_sc0002604.1_g000010 Rmu_sc0002604.1_g000011 Rmu_sc0004750.1_g000003 Rmu_sc0006571.1_g000001 Rmu_sc0006571.1_g000014 Rmu_sc0006571.1_g000018 Rmu_sc0008050.1_g000016 Rmu_sc0008066.1_g000009 Rmu_sc0008380.1_g000006 Rmu_sc0008380.1_g000010 Rmu_sc0008380.1_g000012 Rmu_sc0010272.1_g000021 Rmu_sc0010693.1_g000010 Rmu_sc0010693.1_g000012 Rmu_sc0010693.1_g000014 Rmu_sc0010693.1_g000015 Rmu_sc0031790.1_g000003 Rmu_sc0040539.1_g000001 Rmu_ssc0000211.1_g000001 Rmu_ssc0000211.1_g000011 Rmu_ssc0000211.1_g000013
rosa_roxburghii Rroxscaffold_1G00006420 Rroxscaffold_1G00006430 Rroxscaffold_5G00334020 Rroxscaffold_5G00334050 Rroxscaffold_5G00335420
rosa_rugosa Rorug03G0307600 Rorug03G0308600 Rorug03G0322400 Rorug05G0437200 Rorug05G0437200 Rorug05G0437200
rosa_samantha Rh1BG075700 Rh4BG010000 Rh4BG010100 Rh4BG010200 Rh4BG020000 Rh4BG020400 Rh4BG172100 Rh4CG015300 Rh4CG016300 Rh5AG494100 Rh5AG494200 Rh5BG515500 Rh5CG539300 Rh5DG528200
rosa_wichuraiana Rw4G000930 Rw4G001980 Rw4G001990 Rw4G011950 Rw5G045850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 4 cut(s) 74, 104, 801, 1187
AclWI GGATC 2 cut(s) 527, 540
AcsI RAATTY 3 cut(s) 12, 348, 1135
AcuI CTGAAG 1 cut(s) 375
AfaI GTAC 4 cut(s) 376, 480, 708, 838
AfiI CCNNNNNNNGG 2 cut(s) 722, 1089
AgsI TTSAA 5 cut(s) 142, 413, 554, 1088, 1296
AhlI ACTAGT 2 cut(s) 1229, 1352
AjnI CCWGG 1 cut(s) 635
Alw21I GWGCWC 3 cut(s) 178, 863, 1271
Alw26I GTCTC 2 cut(s) 706, 1343
Alw44I GTGCAC 1 cut(s) 1267
AlwI GGATC 2 cut(s) 527, 540
Ama87I CYCGRG 2 cut(s) 89, 873
AoxI GGCC 3 cut(s) 724, 751, 922
ApaLI GTGCAC 1 cut(s) 1267
ApeKI GCWGC 4 cut(s) 106, 238, 805, 1286
ApoI RAATTY 3 cut(s) 12, 348, 1135
Asp700I GAANNNNTTC 2 cut(s) 435, 1053
AspS9I GGNCC 3 cut(s) 359, 752, 780
AsuC2I CCSGG 2 cut(s) 90, 91
AsuHPI GGTGA 6 cut(s) 215, 434, 524, 613, 998, 1058
AsuII TTCGAA 1 cut(s) 10
AvaI CYCGRG 2 cut(s) 89, 873
AvaII GGWCC 2 cut(s) 359, 780
BaeGI GKGCMC 1 cut(s) 1271
BamHI GGATCC 1 cut(s) 532
BanII GRGCYC 3 cut(s) 178, 573, 863
Bbv12I GWGCWC 3 cut(s) 178, 863, 1271
BbvCI CCTCAGC 1 cut(s) 784
BbvI GCAGC 4 cut(s) 118, 250, 792, 1273
BccI CCATC 4 cut(s) 560, 587, 653, 716
BceAI ACGGC 1 cut(s) 347
BcgI CGANNNNNNTGC 2 cut(s) 144, 178
BciT130I CCWGG 1 cut(s) 637
BciVI GTATCC 1 cut(s) 1269
BcnI CCSGG 2 cut(s) 90, 91
BcoDI GTCTC 2 cut(s) 706, 1343
BcuI ACTAGT 2 cut(s) 1229, 1352
BfaI CTAG 5 cut(s) 110, 234, 1230, 1353, 1384
BfmI CTRYAG 1 cut(s) 310
BfuI GTATCC 1 cut(s) 1269
BglII AGATCT 2 cut(s) 672, 774
BisI GCNGC 5 cut(s) 104, 107, 239, 806, 1287
BlsI GCNGC 5 cut(s) 105, 108, 240, 807, 1288
BmcAI AGTACT 1 cut(s) 708
Bme1390I CCNGG 3 cut(s) 90, 91, 637
Bme18I GGWCC 2 cut(s) 359, 780
BmeT110I CYCGRG 2 cut(s) 89, 873
BmgT120I GGNCC 3 cut(s) 359, 752, 780
BmiI GGNNCC 3 cut(s) 534, 572, 1212
BmrFI CCNGG 3 cut(s) 90, 91, 637
BmrI ACTGGG 2 cut(s) 807, 1032
BmsI GCATC 8 cut(s) 61, 808, 874, 1165, 1214, 1346, 1348, 1354
BmuI ACTGGG 2 cut(s) 807, 1032
BplI GAGNNNNNCTC 2 cut(s) 850, 882
Bpu10I CCTNAGC 2 cut(s) 528, 784
Bpu14I TTCGAA 1 cut(s) 10
BpuMI CCSGG 2 cut(s) 90, 91
BsaI GGTCTC 1 cut(s) 706
BsaJI CCNNGG 3 cut(s) 89, 90, 213
BsaWI WCCGGW 1 cut(s) 1345
Bsc4I CCNNNNNNNGG 2 cut(s) 722, 1089
Bse1I ACTGG 4 cut(s) 813, 1027, 1161, 1276
BseBI CCWGG 1 cut(s) 637
BseDI CCNNGG 3 cut(s) 89, 90, 213
BseGI GGATG 5 cut(s) 223, 439, 633, 664, 889
BseLI CCNNNNNNNGG 2 cut(s) 722, 1089
BseMII CTCAG 4 cut(s) 701, 798, 813, 1173
BseNI ACTGG 4 cut(s) 813, 1027, 1161, 1276
BseSI GKGCMC 1 cut(s) 1271
BseXI GCAGC 4 cut(s) 118, 250, 792, 1273
BsgI GTGCAG 1 cut(s) 1263
BshFI GGCC 3 cut(s) 726, 753, 924
BsiHKAI GWGCWC 3 cut(s) 178, 863, 1271
BsiHKCI CYCGRG 2 cut(s) 89, 873
BsiSI CCGG 2 cut(s) 90, 1346
BslFI GGGAC 2 cut(s) 503, 1039
BslI CCNNNNNNNGG 2 cut(s) 722, 1089
BsmAI GTCTC 2 cut(s) 706, 1343
BsmFI GGGAC 2 cut(s) 503, 1039
BsmI GAATGC 2 cut(s) 887, 958
BsnI GGCC 3 cut(s) 726, 753, 924
Bso31I GGTCTC 1 cut(s) 706
BsoBI CYCGRG 2 cut(s) 89, 873
Bsp119I TTCGAA 1 cut(s) 10
Bsp1286I GDGCHC 4 cut(s) 178, 573, 863, 1271
Bsp143I GATC 4 cut(s) 161, 532, 672, 774
BspACI CCGC 4 cut(s) 74, 104, 801, 1187
BspANI GGCC 3 cut(s) 726, 753, 924
BspCNI CTCAG 4 cut(s) 702, 797, 814, 1174
BspLI GGNNCC 3 cut(s) 534, 572, 1212
BspMAI CTGCAG 1 cut(s) 314
BspPI GGATC 2 cut(s) 527, 540
BspT104I TTCGAA 1 cut(s) 10
BspTNI GGTCTC 1 cut(s) 706
BsrI ACTGG 4 cut(s) 813, 1027, 1161, 1276
BssECI CCNNGG 3 cut(s) 89, 90, 213
BssMI GATC 4 cut(s) 161, 532, 672, 774
Bst2UI CCWGG 1 cut(s) 637
Bst4CI ACNGT 1 cut(s) 1092
BstBI TTCGAA 1 cut(s) 10
BstC8I GCNNGC 4 cut(s) 41, 803, 922, 993
BstDEI CTNAG 8 cut(s) 528, 710, 784, 822, 847, 945, 973, 1182
BstEII GGTNACC 1 cut(s) 1116
BstF5I GGATG 5 cut(s) 223, 439, 633, 664, 889
BstKTI GATC 4 cut(s) 164, 535, 675, 777
BstMAI GTCTC 2 cut(s) 706, 1343
BstMBI GATC 4 cut(s) 161, 532, 672, 774
BstMWI GCNNNNNNNGC 3 cut(s) 209, 962, 1184
BstNI CCWGG 1 cut(s) 637
BstPI GGTNACC 1 cut(s) 1116
BstSCI CCNGG 3 cut(s) 88, 89, 635
BstSFI CTRYAG 1 cut(s) 310
BstSLI GKGCMC 1 cut(s) 1271
BstV1I GCAGC 4 cut(s) 118, 250, 792, 1273
BstX2I RGATCY 3 cut(s) 532, 672, 774
BstXI CCANNNNNNTGG 2 cut(s) 581, 640
BstYI RGATCY 3 cut(s) 532, 672, 774
BsuI GTATCC 1 cut(s) 1269
BsuRI GGCC 3 cut(s) 726, 753, 924
BtgZI GCGATG 1 cut(s) 1323
BtsCI GGATG 5 cut(s) 223, 439, 633, 664, 889
BtsI GCAGTG 2 cut(s) 150, 319
BtsIMutI CAGTG 6 cut(s) 150, 319, 325, 820, 1168, 1269
Cac8I GCNNGC 4 cut(s) 41, 803, 922, 993
Cfr13I GGNCC 3 cut(s) 359, 752, 780
Cfr9I CCCGGG 1 cut(s) 89
Csp6I GTAC 4 cut(s) 375, 479, 707, 837
CviAII CATG 7 cut(s) 61, 199, 255, 828, 967, 1043, 1172
CviQI GTAC 4 cut(s) 375, 479, 707, 837
DdeI CTNAG 8 cut(s) 528, 710, 784, 822, 847, 945, 973, 1182
DpnI GATC 4 cut(s) 163, 534, 674, 776
DpnII GATC 4 cut(s) 161, 532, 672, 774
DraI TTTAAA 1 cut(s) 855
Ecl136II GAGCTC 2 cut(s) 176, 861
Eco24I GRGCYC 3 cut(s) 178, 573, 863
Eco31I GGTCTC 1 cut(s) 706
Eco47I GGWCC 2 cut(s) 359, 780
Eco53kI GAGCTC 2 cut(s) 176, 861
Eco57I CTGAAG 1 cut(s) 375
Eco88I CYCGRG 2 cut(s) 89, 873
Eco91I GGTNACC 1 cut(s) 1116
EcoICRI GAGCTC 2 cut(s) 176, 861
EcoO65I GGTNACC 1 cut(s) 1116
EcoRI GAATTC 2 cut(s) 12, 1135
EcoRII CCWGG 1 cut(s) 635
EcoT22I ATGCAT 1 cut(s) 889
EcoT38I GRGCYC 3 cut(s) 178, 573, 863
FaeI CATG 7 cut(s) 64, 202, 258, 831, 970, 1046, 1175
FalI AAGNNNNNCTT 4 cut(s) 318, 350, 909, 941
FaqI GGGAC 2 cut(s) 503, 1039
FatI CATG 7 cut(s) 60, 198, 254, 827, 966, 1042, 1171
FauI CCCGC 2 cut(s) 67, 794
Fnu4HI GCNGC 5 cut(s) 104, 107, 239, 806, 1287
FokI GGATG 5 cut(s) 230, 426, 640, 671, 896
FriOI GRGCYC 3 cut(s) 178, 573, 863
Fsp4HI GCNGC 5 cut(s) 104, 107, 239, 806, 1287
FspBI CTAG 5 cut(s) 110, 234, 1230, 1353, 1384
GluI GCNGC 5 cut(s) 104, 107, 239, 806, 1287
HaeIII GGCC 3 cut(s) 726, 753, 924
HapII CCGG 2 cut(s) 90, 1346
Hin1II CATG 7 cut(s) 64, 202, 258, 831, 970, 1046, 1175
HincII GTYRAC 1 cut(s) 1194
HindII GTYRAC 1 cut(s) 1194
HindIII AAGCTT 1 cut(s) 557
HinfI GANTC 4 cut(s) 7, 824, 1157, 1322
HpaII CCGG 2 cut(s) 90, 1346
HphI GGTGA 6 cut(s) 215, 434, 524, 613, 998, 1058
Hpy166II GTNNAC 7 cut(s) 67, 223, 479, 837, 1020, 1194, 1269
Hpy188I TCNGA 5 cut(s) 18, 298, 355, 1156, 1210
Hpy188III TCNNGA 3 cut(s) 362, 764, 873
Hpy8I GTNNAC 7 cut(s) 67, 223, 479, 837, 1020, 1194, 1269
HpyAV CCTTC 7 cut(s) 320, 350, 365, 531, 737, 791, 935
HpyCH4III ACNGT 1 cut(s) 1092
HpyF10VI GCNNNNNNNGC 3 cut(s) 209, 962, 1184
HpyF3I CTNAG 8 cut(s) 528, 710, 784, 822, 847, 945, 973, 1182
Hsp92II CATG 7 cut(s) 64, 202, 258, 831, 970, 1046, 1175
Kzo9I GATC 4 cut(s) 161, 532, 672, 774
LmnI GCTCC 1 cut(s) 576
Lsp1109I GCAGC 4 cut(s) 118, 250, 792, 1273
LweI GCATC 8 cut(s) 61, 808, 874, 1165, 1214, 1346, 1348, 1354
MaeI CTAG 5 cut(s) 110, 234, 1230, 1353, 1384
MaeIII GTNAC 6 cut(s) 115, 190, 601, 690, 912, 1116
MalI GATC 4 cut(s) 163, 534, 674, 776
MboI GATC 4 cut(s) 161, 532, 672, 774
MboII GAAGA 6 cut(s) 262, 380, 692, 784, 806, 961
MflI RGATCY 3 cut(s) 532, 672, 774
MhlI GDGCHC 4 cut(s) 178, 573, 863, 1271
MluCI AATT 9 cut(s) 12, 48, 348, 417, 486, 575, 1135, 1198, 1291
MlyI GAGTC 1 cut(s) 833
Mph1103I ATGCAT 1 cut(s) 889
MroXI GAANNNNTTC 2 cut(s) 435, 1053
MseI TTAA 6 cut(s) 47, 260, 540, 759, 854, 894
MslI CAYNNNNRTG 2 cut(s) 197, 832
MspI CCGG 2 cut(s) 90, 1346
MspR9I CCNGG 3 cut(s) 90, 91, 637
Mva1269I GAATGC 2 cut(s) 887, 958
MvaI CCWGG 1 cut(s) 637
MwoI GCNNNNNNNGC 3 cut(s) 209, 962, 1184
NciI CCSGG 2 cut(s) 90, 91
NdeII GATC 4 cut(s) 161, 532, 672, 774
NlaIII CATG 7 cut(s) 64, 202, 258, 831, 970, 1046, 1175
NlaIV GGNNCC 3 cut(s) 534, 572, 1212
NmeAIII GCCGAG 1 cut(s) 238
NmuCI GTSAC 4 cut(s) 190, 601, 690, 912
NsiI ATGCAT 1 cut(s) 889
NspV TTCGAA 1 cut(s) 10
PaeR7I CTCGAG 1 cut(s) 873
PctI GAATGC 2 cut(s) 887, 958
PdmI GAANNNNTTC 2 cut(s) 435, 1053
PfeI GAWTC 3 cut(s) 7, 1157, 1322
PkrI GCNGC 5 cut(s) 105, 108, 240, 807, 1288
PleI GAGTC 1 cut(s) 832
PpsI GAGTC 1 cut(s) 832
Psp124BI GAGCTC 2 cut(s) 178, 863
Psp6I CCWGG 1 cut(s) 635
PspEI GGTNACC 1 cut(s) 1116
PspGI CCWGG 1 cut(s) 635
PspN4I GGNNCC 3 cut(s) 534, 572, 1212
PspPI GGNCC 3 cut(s) 359, 752, 780
PsrI GAACNNNNNNTAC 2 cut(s) 1203, 1235
PstI CTGCAG 1 cut(s) 314
PsuI RGATCY 3 cut(s) 532, 672, 774
RsaI GTAC 4 cut(s) 376, 480, 708, 838
RsaNI GTAC 4 cut(s) 375, 479, 707, 837
RseI CAYNNNNRTG 2 cut(s) 197, 832
SacI GAGCTC 2 cut(s) 178, 863
SaqAI TTAA 6 cut(s) 47, 260, 540, 759, 854, 894
SatI GCNGC 5 cut(s) 104, 107, 239, 806, 1287
Sau3AI GATC 4 cut(s) 161, 532, 672, 774
Sau96I GGNCC 3 cut(s) 359, 752, 780
ScaI AGTACT 1 cut(s) 708
SchI GAGTC 1 cut(s) 833
ScrFI CCNGG 3 cut(s) 90, 91, 637
SduI GDGCHC 4 cut(s) 178, 573, 863, 1271
SfaNI GCATC 8 cut(s) 61, 808, 874, 1165, 1214, 1346, 1348, 1354
SfcI CTRYAG 1 cut(s) 310
Sfr274I CTCGAG 1 cut(s) 873
SfuI TTCGAA 1 cut(s) 10
SinI GGWCC 2 cut(s) 359, 780
SlaI CTCGAG 1 cut(s) 873
SmaI CCCGGG 1 cut(s) 91
SmiMI CAYNNNNRTG 2 cut(s) 197, 832
SmlI CTYRAG 1 cut(s) 873
SmoI CTYRAG 1 cut(s) 873
SpeI ACTAGT 2 cut(s) 1229, 1352
Sse9I AATT 9 cut(s) 12, 48, 348, 417, 486, 575, 1135, 1198, 1291
SsiI CCGC 4 cut(s) 74, 104, 801, 1187
SspMI CTAG 5 cut(s) 110, 234, 1230, 1353, 1384
SstI GAGCTC 2 cut(s) 178, 863
StyD4I CCNGG 3 cut(s) 88, 89, 635
TaaI ACNGT 1 cut(s) 1092
TaqI TCGA 3 cut(s) 10, 172, 874
TasI AATT 9 cut(s) 12, 48, 348, 417, 486, 575, 1135, 1198, 1291
TatI WGTACW 2 cut(s) 478, 706
TauI GCSGC 1 cut(s) 106
TfiI GAWTC 3 cut(s) 7, 1157, 1322
Tru1I TTAA 6 cut(s) 47, 260, 540, 759, 854, 894
Tru9I TTAA 6 cut(s) 47, 260, 540, 759, 854, 894
TscAI CASTG 6 cut(s) 157, 319, 325, 820, 1168, 1276
TseFI GTSAC 4 cut(s) 190, 601, 690, 912
TseI GCWGC 4 cut(s) 106, 238, 805, 1286
Tsp45I GTSAC 4 cut(s) 190, 601, 690, 912
TspDTI ATGAA 3 cut(s) 238, 381, 428
TspMI CCCGGG 1 cut(s) 89
TspRI CASTG 6 cut(s) 157, 319, 325, 820, 1168, 1276
VneI GTGCAC 1 cut(s) 1267
VpaK11BI GGWCC 2 cut(s) 359, 780
XapI RAATTY 3 cut(s) 12, 348, 1135
XhoI CTCGAG 1 cut(s) 873
XmaI CCCGGG 1 cut(s) 89
XmnI GAANNNNTTC 2 cut(s) 435, 1053
XspI CTAG 5 cut(s) 110, 234, 1230, 1353, 1384
ZrmI AGTACT 1 cut(s) 708
Zsp2I ATGCAT 1 cut(s) 889
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.