RchiOBHm_Chr4g0389201

Enhancer of mRNA-decapping protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000324
Physical Location & Seq
Forward (+)
4313186 .. 4317065
3880 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ36236

Sequence Viewer

Length: 1320 bp
ATGCAAATTATGGTAGCTCATCGAATTTTGGCTAGTGTAGGAGGATGGCTTTTTGTGTGGAAAATTTCTGAAAGTCCAGATGAAGGAGGTACGCCACAAATTACAGGAAAGATTGTTATTGCCATTCAAATAGTTGGTGAGGGGGAAGCTGTTCATCCACGAGTTTGTTGGCACTATCATATACAAGATGTTCTGGTTGTTGGGGTTGGGAAGTGTGTCCTACGAATTGATACTACTAAAGTTGCAAAGGGTGAAGTCCCTTCTGCTGAGGTTCCTATTAAGTGTCCTGTTGAAAAGCTCATTGATGGGGTCCAATTTGTTGGTAAACATGATGGAGAGGTGACAGATTTATCAATGTGCCAATGGATGACCACCCAGCTGGTTTCTGCTTCTATGGATGGAACTCTCCCAACAGGCCTGATCTCTACGGGGCCGCTTAATCGGGAAGTGAAGATCTGGTCCTCAGCGAGTGAAGAAGGCTGGCTACTTCCCAGTGATGCTGAGTCATGGAAATGTACCCAGACCTTAGAGTTAAAGGGCTCTGCTCAACCTCGAGTTGAGGATGCATTCTTTAATCAAGTCATAGCATTGTCACAAGCTGGCCTTCTTTTAGTTGCAAATGCTAAGAAGAATGCTATATATGCCGTGCACTTAGACCTTGGTGGTGAGCCAGCATCTACATGCATGGATTACAGAGCAGAATTTACAATGCTTATTTTGAGCTTTACTGGGACAAGTATATCACCTCATGGTTTAGAAAAGTTCTTTTGTTTCCAGGCATCCGATCTTGGAATTGAGATGGCCGGGGATTGCTGTGCAATATCATTAGAATCTTATATTACAGATGAAGCTTGGCAAGGTGATGGTGCCAGCATGTCAGAACCACTAGCCCAGCCTCATTCTGGAGAGGAAGACCACGATCGCTCTACAAAAAATATATCTGGGCCTGCTACCGCCACAACCGCATCACAACTACAAGCACCAAATGCAAAGTCGAGAAAACAGAAATGGAAAAATATGCAAGCATCAGGTCAATCTTCCCCATCACCAGGTGTGCTCAACTCAATAGAGCCCTCTAATGAAGCAGGTGGGAGTTCAAGTCCCCCCTCCGGAGAAGCTGCATTTCCTCAAATTATGGCCAGGCAGGATATGATGAATCAGCTAATGACTATGCAAAAAGAATTGCAAAAGCAGATGACAATGATGGTTACCGTCCCAATTACTAAGGAAGGCAAACGATTAGAGGCTGCTCTCGGTCGGAGTATGGAGAAGGCTGTAAAGGCCAATAATTTGCTTTGTGGGCTTGGTTTCAAGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000932 GO:0000956 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009892 GO:0009933 GO:0009965 GO:0009987 GO:0010014 GO:0010015 GO:0010016 GO:0010033 GO:0010071 GO:0010072 GO:0010154 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022414 GO:0022622 GO:0023052 GO:0031086 GO:0031087 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0046983 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048508 GO:0048519 GO:0048532 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0090304 GO:0090305 GO:0090421 GO:0097159 GO:0099402 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1905392 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Ge1_WD40

Protein Analysis

439

Amino Acids

47.27

Weight (kDa)

5.48

Isoelectric Point (pI)

43.46

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000324)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13290 AT3G13300 AT3G13300 AT3G13300
fragaria_vesca FvH4_3g41972 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g42780 FvH4_3g42790 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_4g01881 FvH4_7g10420
malus_domestica MD00G1013700.v1.1 MD03G1039800.v1.1 MD11G1041300.v1.1 MD11G1094900.v1.1
prunus_persica Prupe.6G032100_v2.0.a1
pyrus_communis pycom03g03070 pycom11g03500 pycom11g08470 pycom12g06730
rosa_chinensis RchiOBHm_Chr1g0328831 RchiOBHm_Chr4g0386471 RchiOBHm_Chr4g0386481 RchiOBHm_Chr4g0386551 RchiOBHm_Chr4g0386701 RchiOBHm_Chr4g0386801 RchiOBHm_Chr4g0386811 RchiOBHm_Chr4g0386821 RchiOBHm_Chr4g0386921 RchiOBHm_Chr4g0386931 RchiOBHm_Chr4g0386941 RchiOBHm_Chr4g0387211 RchiOBHm_Chr4g0389101 RchiOBHm_Chr4g0389111 RchiOBHm_Chr4g0389201 RchiOBHm_Chr4g0389211 RchiOBHm_Chr4g0389321 RchiOBHm_Chr4g0389331 RchiOBHm_Chr4g0389341 RchiOBHm_Chr4g0389411 RchiOBHm_Chr5g0075171
rosa_laevigata RLG00000009985 RLG00000009990 RLG00000009996 RLG00000009998 RLG00000010136 RLG00000010140 RLG00000036537
rosa_multiflora Rmu_co8461959.1_g000001 Rmu_sc0000013.1_g000017 Rmu_sc0000013.1_g000024 Rmu_sc0001015.1_g000001 Rmu_sc0001395.1_g000004 Rmu_sc0001942.1_g000022 Rmu_sc0002498.1_g000018 Rmu_sc0002498.1_g000020 Rmu_sc0002557.1_g000005 Rmu_sc0002604.1_g000010 Rmu_sc0002604.1_g000011 Rmu_sc0004750.1_g000003 Rmu_sc0006571.1_g000001 Rmu_sc0006571.1_g000014 Rmu_sc0006571.1_g000018 Rmu_sc0008050.1_g000016 Rmu_sc0008066.1_g000009 Rmu_sc0008380.1_g000006 Rmu_sc0008380.1_g000010 Rmu_sc0008380.1_g000012 Rmu_sc0010272.1_g000021 Rmu_sc0010693.1_g000010 Rmu_sc0010693.1_g000012 Rmu_sc0010693.1_g000014 Rmu_sc0010693.1_g000015 Rmu_sc0031790.1_g000003 Rmu_sc0040539.1_g000001 Rmu_ssc0000211.1_g000001 Rmu_ssc0000211.1_g000011 Rmu_ssc0000211.1_g000013
rosa_roxburghii Rroxscaffold_1G00006420 Rroxscaffold_1G00006430 Rroxscaffold_5G00334020 Rroxscaffold_5G00334050 Rroxscaffold_5G00335420
rosa_rugosa Rorug03G0307600 Rorug03G0308600 Rorug03G0322400 Rorug05G0437200 Rorug05G0437200 Rorug05G0437200
rosa_samantha Rh1BG075700 Rh4BG010000 Rh4BG010100 Rh4BG010200 Rh4BG020000 Rh4BG020400 Rh4BG172100 Rh4CG015300 Rh4CG016300 Rh5AG494100 Rh5AG494200 Rh5BG515500 Rh5CG539300 Rh5DG528200
rosa_wichuraiana Rw4G000930 Rw4G001980 Rw4G001990 Rw4G011950 Rw5G045850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1076
Acc36I ACCTGC 1 cut(s) 1076
AccB1I GGYRCC 1 cut(s) 866
AccIII TCCGGA 1 cut(s) 1109
AciI CCGC 3 cut(s) 434, 954, 963
AcoI YGGCCR 2 cut(s) 801, 1137
AcsI RAATTY 3 cut(s) 24, 63, 701
AdeI CACNNNGTG 1 cut(s) 1052
AfaI GTAC 2 cut(s) 91, 517
AfiI CCNNNNNNNGG 4 cut(s) 83, 902, 1049, 1109
AgsI TTSAA 4 cut(s) 128, 293, 1098, 1312
AjnI CCWGG 3 cut(s) 774, 1048, 1139
AluBI AGCT 9 cut(s) 17, 149, 298, 379, 599, 723, 851, 1118, 1162
AluI AGCT 9 cut(s) 17, 149, 298, 379, 599, 723, 851, 1118, 1162
Alw21I GWGCWC 2 cut(s) 651, 1059
Alw44I GTGCAC 1 cut(s) 647
Ama87I CYCGRG 1 cut(s) 552
Aor13HI TCCGGA 1 cut(s) 1109
AoxI GGCC 7 cut(s) 415, 431, 601, 801, 944, 1137, 1281
ApaLI GTGCAC 1 cut(s) 647
ApeKI GCWGC 2 cut(s) 1118, 1247
ApoI RAATTY 3 cut(s) 24, 63, 701
ArsI GACNNNNNNTTYG 2 cut(s) 977, 1009
Asp700I GAANNNNTTC 1 cut(s) 150
AspS9I GGNCC 4 cut(s) 310, 431, 459, 944
AsuC2I CCSGG 1 cut(s) 805
AsuHPI GGTGA 7 cut(s) 149, 263, 352, 677, 735, 872, 1038
AvaI CYCGRG 1 cut(s) 552
AvaII GGWCC 2 cut(s) 310, 459
BaeGI GKGCMC 1 cut(s) 651
BalI TGGCCA 1 cut(s) 1139
BanI GGYRCC 1 cut(s) 866
BanII GRGCYC 2 cut(s) 542, 1074
BarI GAAGNNNNNNTAC 2 cut(s) 468, 500
BauI CACGAG 1 cut(s) 159
BbsI GAAGAC 1 cut(s) 918
Bbv12I GWGCWC 2 cut(s) 651, 1059
BbvCI CCTCAGC 2 cut(s) 267, 463
BbvI GCAGC 2 cut(s) 1105, 1234
BccI CCATC 8 cut(s) 39, 299, 326, 392, 793, 857, 1051, 1198
BceAI ACGGC 1 cut(s) 629
BciT130I CCWGG 3 cut(s) 776, 1050, 1141
BcnI CCSGG 1 cut(s) 805
BfaI CTAG 2 cut(s) 33, 887
BfuAI ACCTGC 1 cut(s) 1076
BglII AGATCT 1 cut(s) 453
BisI GCNGC 3 cut(s) 434, 1119, 1248
BlsI GCNGC 3 cut(s) 435, 1120, 1249
Bme1390I CCNGG 4 cut(s) 776, 805, 1050, 1141
Bme18I GGWCC 2 cut(s) 310, 459
BmeT110I CYCGRG 1 cut(s) 552
BmgT120I GGNCC 4 cut(s) 310, 431, 459, 944
BmiI GGNNCC 4 cut(s) 273, 311, 432, 868
BmrFI CCNGG 4 cut(s) 776, 805, 1050, 1141
BmrI ACTGGG 2 cut(s) 486, 738
BmsI GCATC 6 cut(s) 487, 553, 683, 788, 974, 1034
BmuI ACTGGG 2 cut(s) 486, 738
BpiI GAAGAC 1 cut(s) 918
BpmI CTGGAG 1 cut(s) 924
Bpu10I CCTNAGC 2 cut(s) 267, 463
BpuMI CCSGG 1 cut(s) 805
BsaJI CCNNGG 2 cut(s) 658, 804
BsaWI WCCGGW 1 cut(s) 1109
BsaXI ACNNNNNCTCC 2 cut(s) 1084, 1114
Bsc4I CCNNNNNNNGG 4 cut(s) 83, 902, 1049, 1109
Bse1I ACTGG 2 cut(s) 492, 733
BseAI TCCGGA 1 cut(s) 1109
BseBI CCWGG 3 cut(s) 776, 1050, 1141
BseDI CCNNGG 2 cut(s) 658, 804
BseGI GGATG 6 cut(s) 50, 154, 372, 403, 568, 779
BseLI CCNNNNNNNGG 4 cut(s) 83, 902, 1049, 1109
BseMII CTCAG 3 cut(s) 258, 477, 492
BseNI ACTGG 2 cut(s) 492, 733
BseSI GKGCMC 1 cut(s) 651
BseXI GCAGC 2 cut(s) 1105, 1234
BseYI CCCAGC 2 cut(s) 375, 891
Bsh1285I CGRYCG 2 cut(s) 922, 1258
BshFI GGCC 7 cut(s) 417, 433, 603, 803, 946, 1139, 1283
BshNI GGYRCC 1 cut(s) 866
BsiEI CGRYCG 2 cut(s) 922, 1258
BsiHKAI GWGCWC 2 cut(s) 651, 1059
BsiHKCI CYCGRG 1 cut(s) 552
BsiSI CCGG 2 cut(s) 804, 1110
BslFI GGGAC 4 cut(s) 242, 745, 1086, 1199
BslI CCNNNNNNNGG 4 cut(s) 83, 902, 1049, 1109
BsmFI GGGAC 4 cut(s) 242, 745, 1086, 1199
BsmI GAATGC 2 cut(s) 566, 637
BsnI GGCC 7 cut(s) 417, 433, 603, 803, 946, 1139, 1283
BsoBI CYCGRG 1 cut(s) 552
Bsp1286I GDGCHC 4 cut(s) 542, 651, 1059, 1074
Bsp13I TCCGGA 1 cut(s) 1109
Bsp143I GATC 4 cut(s) 420, 453, 784, 919
BspACI CCGC 3 cut(s) 434, 954, 963
BspANI GGCC 7 cut(s) 417, 433, 603, 803, 946, 1139, 1283
BspCNI CTCAG 3 cut(s) 259, 476, 493
BspEI TCCGGA 1 cut(s) 1109
BspLI GGNNCC 4 cut(s) 273, 311, 432, 868
BspMI ACCTGC 1 cut(s) 1076
BspT107I GGYRCC 1 cut(s) 866
BsrI ACTGG 2 cut(s) 492, 733
BssECI CCNNGG 2 cut(s) 658, 804
BssMI GATC 4 cut(s) 420, 453, 784, 919
BssSI CACGAG 1 cut(s) 159
BssT1I CCWWGG 1 cut(s) 658
Bst2BI CACGAG 1 cut(s) 159
Bst2UI CCWGG 3 cut(s) 776, 1050, 1141
Bst4CI ACNGT 1 cut(s) 1213
BstAPI GCANNNNNTGC 1 cut(s) 986
BstC8I GCNNGC 6 cut(s) 482, 601, 672, 871, 948, 1023
BstDEI CTNAG 7 cut(s) 267, 463, 501, 526, 624, 652, 1224
BstEII GGTNACC 1 cut(s) 1207
BstF5I GGATG 6 cut(s) 50, 154, 372, 403, 568, 779
BstKTI GATC 4 cut(s) 423, 456, 787, 922
BstMBI GATC 4 cut(s) 420, 453, 784, 919
BstMCI CGRYCG 2 cut(s) 922, 1258
BstMWI GCNNNNNNNGC 5 cut(s) 641, 962, 986, 1280, 1300
BstNI CCWGG 3 cut(s) 776, 1050, 1141
BstNSI RCATGY 2 cut(s) 684, 877
BstPI GGTNACC 1 cut(s) 1207
BstSCI CCNGG 4 cut(s) 774, 803, 1048, 1139
BstSLI GKGCMC 1 cut(s) 651
BstV1I GCAGC 2 cut(s) 1105, 1234
BstV2I GAAGAC 1 cut(s) 918
BstX2I RGATCY 1 cut(s) 453
BstXI CCANNNNNNTGG 2 cut(s) 320, 379
BstYI RGATCY 1 cut(s) 453
BsuRI GGCC 7 cut(s) 417, 433, 603, 803, 946, 1139, 1283
BtsCI GGATG 6 cut(s) 50, 154, 372, 403, 568, 779
BtsIMutI CAGTG 1 cut(s) 499
BveI ACCTGC 1 cut(s) 1076
Cac8I GCNNGC 6 cut(s) 482, 601, 672, 871, 948, 1023
Cfr13I GGNCC 4 cut(s) 310, 431, 459, 944
CsiI ACCWGGT 1 cut(s) 1048
Csp6I GTAC 2 cut(s) 90, 516
CviAII CATG 6 cut(s) 329, 507, 681, 685, 749, 874
CviQI GTAC 2 cut(s) 90, 516
DdeI CTNAG 7 cut(s) 267, 463, 501, 526, 624, 652, 1224
DpnI GATC 4 cut(s) 422, 455, 786, 921
DpnII GATC 4 cut(s) 420, 453, 784, 919
DraIII CACNNNGTG 1 cut(s) 1052
EaeI YGGCCR 2 cut(s) 801, 1137
Eco130I CCWWGG 1 cut(s) 658
Eco147I AGGCCT 1 cut(s) 417
Eco24I GRGCYC 2 cut(s) 542, 1074
Eco47I GGWCC 2 cut(s) 310, 459
Eco88I CYCGRG 1 cut(s) 552
Eco91I GGTNACC 1 cut(s) 1207
EcoO65I GGTNACC 1 cut(s) 1207
EcoRII CCWGG 3 cut(s) 774, 1048, 1139
EcoT14I CCWWGG 1 cut(s) 658
EcoT22I ATGCAT 2 cut(s) 568, 686
EcoT38I GRGCYC 2 cut(s) 542, 1074
ErhI CCWWGG 1 cut(s) 658
FaeI CATG 6 cut(s) 332, 510, 684, 688, 752, 877
FalI AAGNNNNNCTT 2 cut(s) 588, 620
FaqI GGGAC 4 cut(s) 242, 745, 1086, 1199
FatI CATG 6 cut(s) 328, 506, 680, 684, 748, 873
Fnu4HI GCNGC 3 cut(s) 434, 1119, 1248
FokI GGATG 6 cut(s) 57, 141, 379, 410, 575, 766
FriOI GRGCYC 2 cut(s) 542, 1074
Fsp4HI GCNGC 3 cut(s) 434, 1119, 1248
FspBI CTAG 2 cut(s) 33, 887
GluI GCNGC 3 cut(s) 434, 1119, 1248
GsaI CCCAGC 2 cut(s) 379, 895
GsuI CTGGAG 1 cut(s) 924
HaeIII GGCC 7 cut(s) 417, 433, 603, 803, 946, 1139, 1283
HapII CCGG 2 cut(s) 804, 1110
Hin1II CATG 6 cut(s) 332, 510, 684, 688, 752, 877
HindIII AAGCTT 1 cut(s) 849
HinfI GANTC 3 cut(s) 503, 830, 1156
HpaII CCGG 2 cut(s) 804, 1110
HphI GGTGA 7 cut(s) 149, 263, 352, 677, 735, 872, 1038
Hpy166II GTNNAC 2 cut(s) 326, 649
Hpy188I TCNGA 4 cut(s) 70, 784, 880, 1260
Hpy188III TCNNGA 6 cut(s) 77, 443, 903, 996, 1110, 1312
Hpy8I GTNNAC 2 cut(s) 326, 649
HpyAV CCTTC 6 cut(s) 77, 270, 470, 614, 1223, 1264
HpyCH4III ACNGT 1 cut(s) 1213
HpyF10VI GCNNNNNNNGC 5 cut(s) 641, 962, 986, 1280, 1300
HpyF3I CTNAG 7 cut(s) 267, 463, 501, 526, 624, 652, 1224
Hsp92II CATG 6 cut(s) 332, 510, 684, 688, 752, 877
Kpn2I TCCGGA 1 cut(s) 1109
Kzo9I GATC 4 cut(s) 420, 453, 784, 919
Lsp1109I GCAGC 2 cut(s) 1105, 1234
LweI GCATC 6 cut(s) 487, 553, 683, 788, 974, 1034
MabI ACCWGGT 1 cut(s) 1048
MaeI CTAG 2 cut(s) 33, 887
MaeIII GTNAC 3 cut(s) 340, 591, 1207
MalI GATC 4 cut(s) 422, 455, 786, 921
MboI GATC 4 cut(s) 420, 453, 784, 919
MboII GAAGA 5 cut(s) 463, 485, 640, 923, 1029
MflI RGATCY 1 cut(s) 453
MhlI GDGCHC 4 cut(s) 542, 651, 1059, 1074
MlsI TGGCCA 1 cut(s) 1139
MluNI TGGCCA 1 cut(s) 1139
MlyI GAGTC 1 cut(s) 512
MmeI TCCRAC 1 cut(s) 1238
Mox20I TGGCCA 1 cut(s) 1139
Mph1103I ATGCAT 2 cut(s) 568, 686
MroI TCCGGA 1 cut(s) 1109
MroXI GAANNNNTTC 1 cut(s) 150
MscI TGGCCA 1 cut(s) 1139
MseI TTAA 4 cut(s) 279, 438, 533, 573
MslI CAYNNNNRTG 2 cut(s) 511, 679
Msp20I TGGCCA 1 cut(s) 1139
MspA1I CMGCKG 1 cut(s) 379
MspI CCGG 2 cut(s) 804, 1110
MspR9I CCNGG 4 cut(s) 776, 805, 1050, 1141
Mva1269I GAATGC 2 cut(s) 566, 637
MvaI CCWGG 3 cut(s) 776, 1050, 1141
MwoI GCNNNNNNNGC 5 cut(s) 641, 962, 986, 1280, 1300
NciI CCSGG 1 cut(s) 805
NdeII GATC 4 cut(s) 420, 453, 784, 919
NlaIII CATG 6 cut(s) 332, 510, 684, 688, 752, 877
NlaIV GGNNCC 4 cut(s) 273, 311, 432, 868
NmuCI GTSAC 2 cut(s) 340, 591
NsiI ATGCAT 2 cut(s) 568, 686
NspI RCATGY 2 cut(s) 684, 877
PaeR7I CTCGAG 1 cut(s) 552
PaqCI CACCTGC 1 cut(s) 1076
PceI AGGCCT 1 cut(s) 417
PctI GAATGC 2 cut(s) 566, 637
PdmI GAANNNNTTC 1 cut(s) 150
PfeI GAWTC 2 cut(s) 830, 1156
PkrI GCNGC 3 cut(s) 435, 1120, 1249
Ple19I CGATCG 1 cut(s) 922
PleI GAGTC 1 cut(s) 511
PpsI GAGTC 1 cut(s) 511
Psp6I CCWGG 3 cut(s) 774, 1048, 1139
PspEI GGTNACC 1 cut(s) 1207
PspFI CCCAGC 2 cut(s) 375, 891
PspGI CCWGG 3 cut(s) 774, 1048, 1139
PspN4I GGNNCC 4 cut(s) 273, 311, 432, 868
PspPI GGNCC 4 cut(s) 310, 431, 459, 944
PspXI VCTCGAGB 1 cut(s) 552
PsuI RGATCY 1 cut(s) 453
PvuI CGATCG 1 cut(s) 922
PvuII CAGCTG 1 cut(s) 379
RsaI GTAC 2 cut(s) 91, 517
RsaNI GTAC 2 cut(s) 90, 516
RseI CAYNNNNRTG 2 cut(s) 511, 679
SaqAI TTAA 4 cut(s) 279, 438, 533, 573
SatI GCNGC 3 cut(s) 434, 1119, 1248
Sau3AI GATC 4 cut(s) 420, 453, 784, 919
Sau96I GGNCC 4 cut(s) 310, 431, 459, 944
SchI GAGTC 1 cut(s) 512
ScrFI CCNGG 4 cut(s) 776, 805, 1050, 1141
SduI GDGCHC 4 cut(s) 542, 651, 1059, 1074
SexAI ACCWGGT 1 cut(s) 1048
SfaNI GCATC 6 cut(s) 487, 553, 683, 788, 974, 1034
Sfr274I CTCGAG 1 cut(s) 552
SinI GGWCC 2 cut(s) 310, 459
SlaI CTCGAG 1 cut(s) 552
SmiMI CAYNNNNRTG 2 cut(s) 511, 679
SmlI CTYRAG 1 cut(s) 552
SmoI CTYRAG 1 cut(s) 552
SseBI AGGCCT 1 cut(s) 417
SsiI CCGC 3 cut(s) 434, 954, 963
SspMI CTAG 2 cut(s) 33, 887
StuI AGGCCT 1 cut(s) 417
StyD4I CCNGG 4 cut(s) 774, 803, 1048, 1139
StyI CCWWGG 1 cut(s) 658
TaaI ACNGT 1 cut(s) 1213
TaqI TCGA 3 cut(s) 22, 553, 995
TaqII GACCGA 1 cut(s) 1244
TauI GCSGC 1 cut(s) 436
TfiI GAWTC 2 cut(s) 830, 1156
Tru1I TTAA 4 cut(s) 279, 438, 533, 573
Tru9I TTAA 4 cut(s) 279, 438, 533, 573
TscAI CASTG 1 cut(s) 499
TseFI GTSAC 2 cut(s) 340, 591
TseI GCWGC 2 cut(s) 1118, 1247
Tsp45I GTSAC 2 cut(s) 340, 591
TspDTI ATGAA 5 cut(s) 96, 143, 861, 1095, 1169
TspRI CASTG 1 cut(s) 499
VneI GTGCAC 1 cut(s) 647
VpaK11BI GGWCC 2 cut(s) 310, 459
XapI RAATTY 3 cut(s) 24, 63, 701
XceI RCATGY 2 cut(s) 684, 877
XcmI CCANNNNNNNNNTGG 2 cut(s) 165, 899
XhoI CTCGAG 1 cut(s) 552
XmnI GAANNNNTTC 1 cut(s) 150
XspI CTAG 2 cut(s) 33, 887
Zsp2I ATGCAT 2 cut(s) 568, 686
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.