pycom11g03500

Enhancer of mRNA-decapping protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr11
Physical Location & Seq
Forward (+)
2686188 .. 2693878
7691 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom11g03500.1

Sequence Viewer

Length: 4527 bp
ATGTGGGATGTCACACTGCTGATAATTCACAGTTTAATTGGTCTCTTCCAAGTCCCCACTTCTTCACTCCAAAGTCCTCCCTCATTCCCACAACTTTTAATTATTTTTCGCTCCCTCTCTCCTCTCTGCTCATCACTCCCTTCAGATCCCACTCGCTCTGCAAATCCCAGATTCCCGATCGCCCGTCTCTCTCTCTCTCTAAAATCCATTCCGTCAGGGAATCAAAATCCCATCTTTTTCATTCACTTACAAAACCCACACACACATATTTATAGATCTGCTGCTCCTCCTCCCATGGCTGCCACCGGGAATCAAAATCCGCCGCCGCAGCAGCAACCGCCGCCCTTCGACATGCAGAAGTTCTTTAAACCCACAAGCCCATCTCCTCTCACCCCCCAAACCTCAACCCCCGCCCATTCAAACCAAAACCCTAACCCTAATTTGAGTTCCTCCTCGTTCCCAATCCCGCCCGCTTCTTTCCCTCCTCCCACGGGGCCCTACTCGTACCCGCCCCAAACGGCACCGTTTCACCACCATCAGTTTCAATACCACCCCCACCCGCAGCAGCCCCACCCCCAAATGCCTTACTCTCCGCAAGACCACCTCTTGCTCCACCAGAGGTCTCTCTCGTTTCCCACCCCGCCCCTCCAACCCCCTTCTAATTACAACATTGGCACTCCCGCTTCCAACCCCAACAGCACCGGCGGTAGCAATTCCAATTCAAGCCCGAATTCTGGTGCTCGAATCATGGCGCTTCTTGGTGCTCCTTCGGGAAGTCTAGAGCCTGAGTTGTCGACTCCTACAGGTGTCTCAATGGTGCCCGCTCTCCCTATGGGGATTCCATCCACTGGCCCGACTCGAATGCCCAGCAATAAGCTGCCGAAAGGCAGGCATTTGATTGGTGATAACGTGGTTTACGATGTGGATGTTAGGTTGCAGGGTGAGGTTCAGCCACAGCTCGAAGTTACGCCCATAACCAAGTATGGTTCAGATCCTCAGCTTGTGCTCGGCCGCCAAATTGCGGTTAATAAATCGTATATATGTTATGGATTGAAGCAGGGGAACATTCGGGTGTTGAATATACACACTGCATTGATCGATCTTTGTTTCGAGCTCATACGCAGGGTCACCGACATGGCTTTCTTTGCTGAGGATGTTCACCTTTTGGCTAGTGTAAGTGTAGAAGGACGACTCTTTGTATGGAAGATTTCTGAAGGTCCAGATGAAGAAGGTACGCCACAAATCACTGGAAAGGTTGTCATTGCTATTCAGATAGTTGGAGAGGGAGAAGCTGTTCATCCACGAGTTTGTTGGCACTGTCATAAACAAGAGGTTTTGGTAGTTGGTTTTGGAAAGCGTGTACTAAGAATTGATACTACTAAAGTTGTGAGGGGTGAAGCCCCTTCTGCTGATGAGCCTCTCAAATGTCCTGTTGAAAAGCTGATTGATGGAGTCCAGTTTGTCGGTAAACATGATGGAGAAGTGACCGATTTGTCAATGTGCCAATGGATGACCACCCGTCTGGTTTCTGCTTCTATGGATGGAACAATAAAGATCTGGGAAGATCGCAAGGCTCAACCTCTTTTAGTATTGAGACCCTATGACGGCCAACCTGTTTATTCAGCTACATTTGTGACGGCTCCCCACAGGCCAGATCATATTATACTTATCACAGTGGGGCCACTTAATCGGGAAGTGAAGATCTGGTCCTCAGCGAGTGAAGAAGGCTGGCTGCTTCCCAGTGATGCTGAATCATGGAAATGTACCCAGACATTAGAGTTGAAGAGTTCTTCTGAACCCCGAGTCGAGGAGGCATTCTTTAATCAAGTGATAGCATTGTCACAAGCTGGCCTTCTCTTACTTGCAAATGCTAAGAAGAATGCTATATATGCTGTACACTTAGAATTTGGTTCTGATCCAGCATCAACCCGCATGGATTACATTGCAGAATTTACTGTTACCATGCCTATTTTGAGTTTTACAGGGACCAGTATATCTTCTCATGGTGAACAGATTGTTCAGGTTTATTGTGTCCAGACACTGGCCATTCAGCAGTATGCTTTGGAATTATCAAAGTGCTTGCCTCCACCACTGGATAATGTGGGATTAGAAAAGTCAGATTCCAATATCTCACGCGATGCAATTGGGGCTGAAGGATATCTATCTGGAAGTAAACCCACAGAGGCACTGCTAGCAAATTCATCACCTAAACCAGCCGTACAAGAAAGTAGTTCTGAGGGTGCAGCTGCCATGAGGTACCCTGTAAGCGCTAGTTCTGTTGAGGCAATCACTTCAAAAGATATTACCACTTCAAATACAGAATCCAGACTTGTTTCATTGGCATCGGCAACGAGTGACTCTGATGCTGTTTTTGTTGCATCACCACCTATTACTTTGAGTCCTAAGTTGTCTGGGAAATTTTCTGGTATAAGAAGTCCAGCAGATAGCTCTGAGGCAGGTCGCACACTTAATGACCATGGTGGAGACCAACAAGTCAATGATTACTCAGTTGACAGGCAAATGGACGCTGCTCATTTAAACATGTCAGATGTGCCTGCAGTGGATGAAGACTCGAGGAATGATGAACCTAAAGTTGGACAAGATGATTTATCTAGTGTGCTCAATCCCCCTATCATGTTCAAACATCCAACCCATCTAATAACTCCCTCTGAGATTTTAATGGCTGCTTCATCTTCTGAAGCTGCTACTATTGAAAGCAAGAGTGAGGGGGAGGGAAATATGCAAGATGTTCTTGCTAACAATGATGTAGGTAATTCTGAGGTGGAGATGAAAGTAGTGGGTGAAACGAGATCTACTCAAATTGATGAATTTGGCTCTCAAGGAGAACCACAAAAAGCTATCTCAGAAAATAAAGAAAAATACTTTTGCTCCCAGGCATCAGATCTTGGAATTGAAATGGCCCGAGAATGCTGTGCGCTACCAGCAGAAAATTATGTTACAGATGAAGCTCGGCAAGTTGATGATGCCAGCGTGACAGAACCACCAGGCCAGTCTCATGCTGGAGATGAAGACCAGGACTCTGCAAAAGATGTTTCTGTGTCATCTACCCCCCCAACAGTTTTGCAATCGCAGACATCAAATACAAAAGTGAAAAAACAGAAGTGGAAAAATTCACAAGCATCAGGTTCATCGTTCCCATCAGCAACTGTGCTCAATTCAATAGATTCCACCAACGAACATGGTGTGAGTTCAAGCCTACCCTCTTTAGAAGCTGCACACCCTCAAATTATGGTCATGCAGGATACGGTTAATCAGCTACTGACCATGCAGAAAGAAATGCAAAAGCAGATGACAATGATGGTTGCAGGCCCTGTTACAAAGGAAGGGAGGAGATTGGAAGCTGCTCTTGGGCGAAGTATGGAGAAGACTGTAAAGGCCAATAATGACGCTCTATGGGCTCGTTTTCAAGAAGAGAATGCAAAGAACGAGAAGTTATTGCGAGACCGTAATCAGCAAATAACCAGTTTGATCAATAACTTCATAAACAAGGACTTCCCAGTCATGTTGGAGAAGGTGGTGAAGAAGGAATTATCTGTGATTGTACCAGCTGTTGTTCGTGCTATAACTCCAGCGATTGAGAAGGCCATACCTTTGGCTATTTCTGATTCCTTCCAGAGAGGAGTGGGTGACAAGGCTGTTAATCAGTTGGATAAATCTGTTAACTCAAAACTTGAAGCTACTGTTTCCAGGCAAATTCAGGCACAGTTTCAAACTTCTGGCAAACAAGCTCTTCAGGATGCTCTCAAGTCTAGTATGGAAGCTTTGGTAGTACCTTCCTTTGAGAAGTCATGTAAGGTCATGTTTGAGCAAGTAGATGCTACGTTCCAGAAAGGAATGGTTGAACACACAACTGCGGCCCAGCAGCACTTTGACTCTGCACATTCGCCATTGGCACTGGCTCTAAGGGAAGCTATTAATTCTGCATCATCGGTTACTCAAACCTTAAGCGGAGAAGTGGCTGATGGTCAACGTAAGCTCATAGCTCTTGCAGCTGCACGGGCAAACTCAAGTGCAGTAAATCCTATGGTCACACAACTCACTAATGGACCTTTGGGTGGTCTCCACGAGAAGGTTGAGGTACCTTTGGATCCAAAGAATGAGCTATCGAGGCTGATATCTGAACGCAAGTACGAGGAGGCTTTCACAGCAGCTCTGCAAAGAAGCGATGTGACCATCGTATCGTGGTTATGCCATCAGGTTGATCTGCGTGGGATATTGCTGTCGAATCCTGTTCCCCTGAGCCAAGGTGTGCTTCTCTCTCTTTTGCAACAACTGGCCTGTGATATCAGCAATGATACACCCAGAAAAGTTGCGTGGATGACGGATGTGGCGGGTGCCATAAACCCGACTAACCAAATGATTGCGATGCACGTACGGCCTGTATTTGAGCAAGTTTACAATATACTGCACCATCAACATGCCTTGCCTACGGTCTCTAGTGCCGAACACACTAGTATCCGACTTCTCATGCATGTCATCAATTCCATGATGATGGCCTGTAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
KEGG Pathways
Metabolic & Signaling
Pfam Domains
Protein Families

Protein Analysis

1509

Amino Acids

163.78

Weight (kDa)

5.74

Isoelectric Point (pI)

47.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ge1_WD40 PF16529 322 - 635 2e-15 WD40 region of Ge1, enhancer of mRNA-decapping protein
EDC4_C PF21289 1377 - 1482 1.7e-17 Enhancer of mRNA-decapping protein 4, C-terminal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000324)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13290 AT3G13300 AT3G13300 AT3G13300
fragaria_vesca FvH4_3g41972 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g42780 FvH4_3g42790 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_4g01881 FvH4_7g10420
malus_domestica MD00G1013700.v1.1 MD03G1039800.v1.1 MD11G1041300.v1.1 MD11G1094900.v1.1
prunus_persica Prupe.6G032100_v2.0.a1
pyrus_communis pycom03g03070 pycom11g03500 pycom11g08470 pycom12g06730
rosa_chinensis RchiOBHm_Chr1g0328831 RchiOBHm_Chr4g0386471 RchiOBHm_Chr4g0386481 RchiOBHm_Chr4g0386551 RchiOBHm_Chr4g0386701 RchiOBHm_Chr4g0386801 RchiOBHm_Chr4g0386811 RchiOBHm_Chr4g0386821 RchiOBHm_Chr4g0386921 RchiOBHm_Chr4g0386931 RchiOBHm_Chr4g0386941 RchiOBHm_Chr4g0387211 RchiOBHm_Chr4g0389101 RchiOBHm_Chr4g0389111 RchiOBHm_Chr4g0389201 RchiOBHm_Chr4g0389211 RchiOBHm_Chr4g0389321 RchiOBHm_Chr4g0389331 RchiOBHm_Chr4g0389341 RchiOBHm_Chr4g0389411 RchiOBHm_Chr5g0075171
rosa_laevigata RLG00000009985 RLG00000009990 RLG00000009996 RLG00000009998 RLG00000010136 RLG00000010140 RLG00000036537
rosa_multiflora Rmu_co8461959.1_g000001 Rmu_sc0000013.1_g000017 Rmu_sc0000013.1_g000024 Rmu_sc0001015.1_g000001 Rmu_sc0001395.1_g000004 Rmu_sc0001942.1_g000022 Rmu_sc0002498.1_g000018 Rmu_sc0002498.1_g000020 Rmu_sc0002557.1_g000005 Rmu_sc0002604.1_g000010 Rmu_sc0002604.1_g000011 Rmu_sc0004750.1_g000003 Rmu_sc0006571.1_g000001 Rmu_sc0006571.1_g000014 Rmu_sc0006571.1_g000018 Rmu_sc0008050.1_g000016 Rmu_sc0008066.1_g000009 Rmu_sc0008380.1_g000006 Rmu_sc0008380.1_g000010 Rmu_sc0008380.1_g000012 Rmu_sc0010272.1_g000021 Rmu_sc0010693.1_g000010 Rmu_sc0010693.1_g000012 Rmu_sc0010693.1_g000014 Rmu_sc0010693.1_g000015 Rmu_sc0031790.1_g000003 Rmu_sc0040539.1_g000001 Rmu_ssc0000211.1_g000001 Rmu_ssc0000211.1_g000011 Rmu_ssc0000211.1_g000013
rosa_roxburghii Rroxscaffold_1G00006420 Rroxscaffold_1G00006430 Rroxscaffold_5G00334020 Rroxscaffold_5G00334050 Rroxscaffold_5G00335420
rosa_rugosa Rorug03G0307600 Rorug03G0308600 Rorug03G0322400 Rorug05G0437200 Rorug05G0437200 Rorug05G0437200
rosa_samantha Rh1BG075700 Rh4BG010000 Rh4BG010100 Rh4BG010200 Rh4BG020000 Rh4BG020400 Rh4BG172100 Rh4CG015300 Rh4CG016300 Rh5AG494100 Rh5AG494200 Rh5BG515500 Rh5CG539300 Rh5DG528200
rosa_wichuraiana Rw4G000930 Rw4G001980 Rw4G001990 Rw4G011950 Rw5G045850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 3 cut(s) 1492, 2492, 3518
Acc36I ACCTGC 1 cut(s) 2447
Acc65I GGTACC 2 cut(s) 2256, 4099
AccB1I GGYRCC 5 cut(s) 520, 817, 2256, 4099, 4355
AccB7I CCANNNNNTGG 2 cut(s) 848, 2041
AccBSI CCGCTC 1 cut(s) 824
AccI GTMKAC 1 cut(s) 794
AccII CGCG 1 cut(s) 2136
AclWI GGATC 5 cut(s) 140, 986, 1910, 4103, 4116
AcoI YGGCCR 3 cut(s) 1009, 1606, 2043
AcsI RAATTY 8 cut(s) 730, 1904, 1949, 2197, 2417, 2828, 3130, 3714
AcuI CTGAAG 5 cut(s) 126, 1233, 2172, 2718, 3737
AfeI AGCGCT 1 cut(s) 2269
AflII CTTAAG 1 cut(s) 3964
AflIII ACRYGT 1 cut(s) 2541
AhdI GACNNNNNGTC 1 cut(s) 1518
AhlI ACTAGT 1 cut(s) 4472
AjnI CCWGG 4 cut(s) 2892, 3004, 3033, 3707
AjuI GAANNNNNNNTTGG 6 cut(s) 2577, 2609, 3351, 3383, 4257, 4289
AloI GAACNNNNNNTCC 2 cut(s) 1278, 1310
Alw21I GWGCWC 6 cut(s) 742, 766, 1008, 1116, 2622, 3174
AlwI GGATC 5 cut(s) 140, 986, 1910, 4103, 4116
AlwNI CAGNNNCTG 4 cut(s) 2041, 3167, 3280, 3332
Ama87I CYCGRG 3 cut(s) 1800, 2572, 2922
Aor51HI AGCGCT 1 cut(s) 2269
ApaI GGGCCC 1 cut(s) 498
ApoI RAATTY 8 cut(s) 730, 1904, 1949, 2197, 2417, 2828, 3130, 3714
AseI ATTAAT 1 cut(s) 3936
Asp700I GAANNNNTTC 1 cut(s) 1293
Asp718I GGTACC 2 cut(s) 2256, 4099
AspLEI GCGC 3 cut(s) 754, 2270, 2938
AsuC2I CCSGG 1 cut(s) 307
AsuNHI GCTAGC 1 cut(s) 2191
AvaI CYCGRG 3 cut(s) 1800, 2572, 2922
AvaII GGWCC 4 cut(s) 1217, 1707, 1986, 4067
BaeGI GKGCMC 2 cut(s) 498, 822
BaeI ACNNNNGTAYC 4 cut(s) 4182, 4215, 4459, 4492
BalI TGGCCA 1 cut(s) 2045
BamHI GGATCC 1 cut(s) 4108
BanI GGYRCC 5 cut(s) 520, 817, 2256, 4099, 4355
BanII GRGCYC 3 cut(s) 498, 1116, 3421
BauI CACGAG 2 cut(s) 1302, 4085
BbsI GAAGAC 3 cut(s) 2574, 3036, 3392
Bbv12I GWGCWC 6 cut(s) 742, 766, 1008, 1116, 2622, 3174
BbvCI CCTCAGC 3 cut(s) 996, 1149, 1711
BceAI ACGGC 5 cut(s) 534, 1621, 1653, 2201, 4412
BcgI CGANNNNNNTGC 2 cut(s) 844, 878
BciT130I CCWGG 4 cut(s) 2894, 3006, 3035, 3709
BciVI GTATCC 2 cut(s) 3256, 4487
BclI TGATCA 1 cut(s) 3489
BcnI CCSGG 1 cut(s) 307
BcuI ACTAGT 1 cut(s) 4472
BfaI CTAG 8 cut(s) 779, 1170, 2192, 2271, 2613, 3771, 4458, 4473
BfmI CTRYAG 2 cut(s) 801, 2556
BfoI RGCGCY 2 cut(s) 755, 2271
BfrI CTTAAG 1 cut(s) 3964
BfuAI ACCTGC 1 cut(s) 2447
BfuI GTATCC 2 cut(s) 3256, 4487
BglII AGATCT 5 cut(s) 275, 1554, 1701, 2810, 2902
Bme1390I CCNGG 5 cut(s) 307, 2894, 3006, 3035, 3709
Bme18I GGWCC 4 cut(s) 1217, 1707, 1986, 4067
BmeRI GACNNNNNGTC 1 cut(s) 1518
BmeT110I CYCGRG 3 cut(s) 1800, 2572, 2922
BmrFI CCNGG 5 cut(s) 307, 2894, 3006, 3035, 3709
BmrI ACTGGG 2 cut(s) 1734, 3512
BmtI GCTAGC 1 cut(s) 2195
BmuI ACTGGG 2 cut(s) 1734, 3512
BpiI GAAGAC 3 cut(s) 2574, 3036, 3392
BplI GAGNNNNNCTC 2 cut(s) 2800, 2832
BpmI CTGGAG 2 cut(s) 3042, 3573
Bpu10I CCTNAGC 4 cut(s) 996, 1149, 1711, 4259
BpuEI CTTGAG 3 cut(s) 2823, 3749, 4012
BpuMI CCSGG 1 cut(s) 307
Bsa29I ATCGAT 1 cut(s) 1098
BsaAI YACGTR 1 cut(s) 4393
BsaBI GATNNNNATC 1 cut(s) 2161
BsaI GGTCTC 7 cut(s) 47, 627, 1588, 2478, 3456, 4085, 4459
BsaJI CCNNGG 5 cut(s) 294, 489, 2476, 2892, 4264
BsaXI ACNNNNNCTCC 4 cut(s) 1278, 1308, 2873, 2903
Bse118I RCCGGY 1 cut(s) 701
Bse3DI GCAATG 3 cut(s) 1260, 1941, 4318
Bse8I GATNNNNATC 1 cut(s) 2161
BseBI CCWGG 4 cut(s) 2894, 3006, 3035, 3709
BseCI ATCGAT 1 cut(s) 1098
BseDI CCNNGG 5 cut(s) 294, 489, 2476, 2892, 4264
BseJI GATNNNNATC 1 cut(s) 2161
BseMI GCAATG 3 cut(s) 1260, 1941, 4318
BseSI GKGCMC 2 cut(s) 498, 822
BseX3I CGGCCG 1 cut(s) 1009
BseYI CCCAGC 2 cut(s) 866, 3879
BsgI GTGCAG 6 cut(s) 2262, 3219, 3882, 3999, 4053, 4412
Bsh1236I CGCG 1 cut(s) 2136
Bsh1285I CGRYCG 2 cut(s) 180, 1012
BshNI GGYRCC 5 cut(s) 520, 817, 2256, 4099, 4355
BshVI ATCGAT 1 cut(s) 1098
BsiEI CGRYCG 2 cut(s) 180, 1012
BsiHKAI GWGCWC 6 cut(s) 742, 766, 1008, 1116, 2622, 3174
BsiHKCI CYCGRG 3 cut(s) 1800, 2572, 2922
BsiSI CCGG 2 cut(s) 306, 702
BsiWI CGTACG 1 cut(s) 4393
BslFI GGGAC 2 cut(s) 38, 1999
BsmBI CGTCTC 1 cut(s) 191
BsmFI GGGAC 2 cut(s) 38, 1999
BsmI GAATGC 5 cut(s) 867, 1814, 1885, 2933, 3442
Bso31I GGTCTC 7 cut(s) 47, 627, 1588, 2478, 3456, 4085, 4459
BsoBI CYCGRG 3 cut(s) 1800, 2572, 2922
Bsp120I GGGCCC 1 cut(s) 494
Bsp1286I GDGCHC 9 cut(s) 498, 742, 766, 822, 1008, 1116, 2622, 3174, 3421
Bsp1407I TGTACA 1 cut(s) 1894
Bsp19I CCATGG 2 cut(s) 294, 2476
BspDI ATCGAT 1 cut(s) 1098
BspFNI CGCG 1 cut(s) 2136
BspMAI CTGCAG 1 cut(s) 2560
BspMI ACCTGC 1 cut(s) 2447
BspOI GCTAGC 1 cut(s) 2195
BspPI GGATC 5 cut(s) 140, 986, 1910, 4103, 4116
BspQI GCTCTTC 1 cut(s) 3756
BspT107I GGYRCC 5 cut(s) 520, 817, 2256, 4099, 4355
BspTI CTTAAG 1 cut(s) 3964
BspTNI GGTCTC 7 cut(s) 47, 627, 1588, 2478, 3456, 4085, 4459
BsrBI CCGCTC 1 cut(s) 824
BsrDI GCAATG 3 cut(s) 1260, 1941, 4318
BsrFI RCCGGY 1 cut(s) 701
BsrGI TGTACA 1 cut(s) 1894
BssAI RCCGGY 1 cut(s) 701
BssECI CCNNGG 5 cut(s) 294, 489, 2476, 2892, 4264
BssSI CACGAG 2 cut(s) 1302, 4085
BssT1I CCWWGG 3 cut(s) 294, 2476, 4264
Bst2BI CACGAG 2 cut(s) 1302, 4085
Bst2UI CCWGG 4 cut(s) 2894, 3006, 3035, 3709
Bst6I CTCTTC 4 cut(s) 50, 1778, 3426, 3756
BstAFI CTTAAG 1 cut(s) 3964
BstAUI TGTACA 1 cut(s) 1894
BstBAI YACGTR 1 cut(s) 4393
BstDSI CCRYGG 3 cut(s) 294, 489, 2476
BstEII GGTNACC 1 cut(s) 1126
BstFNI CGCG 1 cut(s) 2136
BstH2I RGCGCY 2 cut(s) 755, 2271
BstHHI GCGC 3 cut(s) 754, 2270, 2938
BstMCI CGRYCG 2 cut(s) 180, 1012
BstNI CCWGG 4 cut(s) 2894, 3006, 3035, 3709
BstNSI RCATGY 4 cut(s) 355, 2545, 4442, 4496
BstPI GGTNACC 1 cut(s) 1126
BstSCI CCNGG 5 cut(s) 305, 2892, 3004, 3033, 3707
BstSFI CTRYAG 2 cut(s) 801, 2556
BstSLI GKGCMC 2 cut(s) 498, 822
BstUI CGCG 1 cut(s) 2136
BstV2I GAAGAC 3 cut(s) 2574, 3036, 3392
BstX2I RGATCY 8 cut(s) 145, 275, 991, 1554, 1701, 2810, 2902, 4108
BstXI CCANNNNNNTGG 3 cut(s) 1522, 3613, 4513
BstYI RGATCY 8 cut(s) 145, 275, 991, 1554, 1701, 2810, 2902, 4108
BstZI CGGCCG 1 cut(s) 1009
Bsu15I ATCGAT 1 cut(s) 1098
BsuI GTATCC 2 cut(s) 3256, 4487
BsuTUI ATCGAT 1 cut(s) 1098
BtgI CCRYGG 3 cut(s) 294, 489, 2476
BtgZI GCGATG 3 cut(s) 2151, 4200, 4400
BtsI GCAGTG 4 cut(s) 14, 1086, 2186, 2565
BveI ACCTGC 1 cut(s) 2447
CaiI CAGNNNCTG 4 cut(s) 2041, 3167, 3280, 3332
CfoI GCGC 3 cut(s) 754, 2270, 2938
Cfr10I RCCGGY 1 cut(s) 701
ClaI ATCGAT 1 cut(s) 1098
CseI GACGC 2 cut(s) 2534, 3416
DraI TTTAAA 2 cut(s) 367, 2538
DrdI GACNNNNNNGTC 3 cut(s) 1492, 2492, 3518
DriI GACNNNNNGTC 1 cut(s) 1518
DseDI GACNNNNNNGTC 3 cut(s) 1492, 2492, 3518
EaeI YGGCCR 3 cut(s) 1009, 1606, 2043
EagI CGGCCG 1 cut(s) 1009
Eam1104I CTCTTC 4 cut(s) 50, 1778, 3426, 3756
Eam1105I GACNNNNNGTC 1 cut(s) 1518
EarI CTCTTC 4 cut(s) 50, 1778, 3426, 3756
EciI GGCGGA 1 cut(s) 309
Ecl136II GAGCTC 1 cut(s) 1114
EclXI CGGCCG 1 cut(s) 1009
Eco130I CCWWGG 3 cut(s) 294, 2476, 4264
Eco24I GRGCYC 3 cut(s) 498, 1116, 3421
Eco31I GGTCTC 7 cut(s) 47, 627, 1588, 2478, 3456, 4085, 4459
Eco32I GATATC 3 cut(s) 2159, 4137, 4306
Eco47I GGWCC 4 cut(s) 1217, 1707, 1986, 4067
Eco47III AGCGCT 1 cut(s) 2269
Eco52I CGGCCG 1 cut(s) 1009
Eco53kI GAGCTC 1 cut(s) 1114
Eco57I CTGAAG 5 cut(s) 126, 1233, 2172, 2718, 3737
Eco88I CYCGRG 3 cut(s) 1800, 2572, 2922
Eco91I GGTNACC 1 cut(s) 1126
EcoICRI GAGCTC 1 cut(s) 1114
EcoO109I RGGNCCY 3 cut(s) 494, 495, 3329
EcoO65I GGTNACC 1 cut(s) 1126
EcoRI GAATTC 1 cut(s) 730
EcoRII CCWGG 4 cut(s) 2892, 3004, 3033, 3707
EcoRV GATATC 3 cut(s) 2159, 4137, 4306
EcoT14I CCWWGG 3 cut(s) 294, 2476, 4264
EcoT22I ATGCAT 1 cut(s) 4494
EcoT38I GRGCYC 3 cut(s) 498, 1116, 3421
ErhI CCWWGG 3 cut(s) 294, 2476, 4264
Esp3I CGTCTC 1 cut(s) 191
FalI AAGNNNNNCTT 8 cut(s) 1836, 1868, 2736, 2768, 3351, 3383, 4257, 4289
FaqI GGGAC 2 cut(s) 38, 1999
FbaI TGATCA 1 cut(s) 3489
FblI GTMKAC 1 cut(s) 794
FriOI GRGCYC 3 cut(s) 498, 1116, 3421
FspBI CTAG 8 cut(s) 779, 1170, 2192, 2271, 2613, 3771, 4458, 4473
GlaI GCGC 3 cut(s) 753, 2269, 2937
GsaI CCCAGC 2 cut(s) 870, 3883
GsuI CTGGAG 2 cut(s) 3042, 3573
HaeII RGCGCY 2 cut(s) 755, 2271
HapII CCGG 2 cut(s) 306, 702
HgaI GACGC 2 cut(s) 2534, 3416
HhaI GCGC 3 cut(s) 754, 2270, 2938
Hin6I GCGC 3 cut(s) 752, 2268, 2936
HinP1I GCGC 3 cut(s) 752, 2268, 2936
HincII GTYRAC 4 cut(s) 795, 2512, 3682, 3989
HindII GTYRAC 4 cut(s) 795, 2512, 3682, 3989
HindIII AAGCTT 1 cut(s) 3780
HpaI GTTAAC 1 cut(s) 3682
HpaII CCGG 2 cut(s) 306, 702
HpyCH4IV ACGT 4 cut(s) 909, 3842, 3991, 4392
HpySE526I ACGT 4 cut(s) 909, 3842, 3991, 4392
HspAI GCGC 3 cut(s) 752, 2268, 2936
KpnI GGTACC 2 cut(s) 2260, 4103
Ksp22I TGATCA 1 cut(s) 3489
KspAI GTTAAC 1 cut(s) 3682
LguI GCTCTTC 1 cut(s) 3756
LmnI GCTCC 6 cut(s) 116, 289, 615, 769, 1645, 2894
MaeI CTAG 8 cut(s) 779, 1170, 2192, 2271, 2613, 3771, 4458, 4473
MaeII ACGT 4 cut(s) 909, 3842, 3991, 4392
MbiI CCGCTC 1 cut(s) 824
MfeI CAATTG 1 cut(s) 2142
MflI RGATCY 8 cut(s) 145, 275, 991, 1554, 1701, 2810, 2902, 4108
MhlI GDGCHC 9 cut(s) 498, 742, 766, 822, 1008, 1116, 2622, 3174, 3421
MlsI TGGCCA 1 cut(s) 2045
MluNI TGGCCA 1 cut(s) 2045
MmeI TCCRAC 8 cut(s) 673, 711, 1258, 2575, 2672, 3507, 3648, 4504
Mox20I TGGCCA 1 cut(s) 2045
Mph1103I ATGCAT 1 cut(s) 4494
MroXI GAANNNNTTC 1 cut(s) 1293
MscI TGGCCA 1 cut(s) 2045
MslI CAYNNNNRTG 5 cut(s) 1070, 1133, 1759, 4437, 4511
Msp20I TGGCCA 1 cut(s) 2045
MspA1I CMGCKG 3 cut(s) 2246, 3569, 4013
MspCI CTTAAG 1 cut(s) 3964
MspI CCGG 2 cut(s) 306, 702
MspR9I CCNGG 5 cut(s) 307, 2894, 3006, 3035, 3709
MunI CAATTG 1 cut(s) 2142
Mva1269I GAATGC 5 cut(s) 867, 1814, 1885, 2933, 3442
MvaI CCWGG 4 cut(s) 2894, 3006, 3035, 3709
MvnI CGCG 1 cut(s) 2136
NciI CCSGG 1 cut(s) 307
NcoI CCATGG 2 cut(s) 294, 2476
NheI GCTAGC 1 cut(s) 2191
NmeAIII GCCGAG 2 cut(s) 987, 2950
NsiI ATGCAT 1 cut(s) 4494
NspI RCATGY 4 cut(s) 355, 2545, 4442, 4496
PaeR7I CTCGAG 1 cut(s) 2572
PciI ACATGT 1 cut(s) 2541
PciSI GCTCTTC 1 cut(s) 3756
PcsI WCGNNNNNNNCGW 1 cut(s) 915
PctI GAATGC 5 cut(s) 867, 1814, 1885, 2933, 3442
PdmI GAANNNNTTC 1 cut(s) 1293
Pfl23II CGTACG 1 cut(s) 4393
PflMI CCANNNNNTGG 2 cut(s) 848, 2041
Ple19I CGATCG 1 cut(s) 180
Ppu21I YACGTR 1 cut(s) 4393
PscI ACATGT 1 cut(s) 2541
PshBI ATTAAT 1 cut(s) 3936
Psp124BI GAGCTC 1 cut(s) 1116
Psp6I CCWGG 4 cut(s) 2892, 3004, 3033, 3707
PspEI GGTNACC 1 cut(s) 1126
PspFI CCCAGC 2 cut(s) 866, 3879
PspGI CCWGG 4 cut(s) 2892, 3004, 3033, 3707
PspLI CGTACG 1 cut(s) 4393
PspOMI GGGCCC 1 cut(s) 494
PspXI VCTCGAGB 1 cut(s) 2572
PstI CTGCAG 1 cut(s) 2560
PstNI CAGNNNCTG 4 cut(s) 2041, 3167, 3280, 3332
PsuI RGATCY 8 cut(s) 145, 275, 991, 1554, 1701, 2810, 2902, 4108
PvuI CGATCG 1 cut(s) 180
PvuII CAGCTG 3 cut(s) 2246, 3569, 4013
RseI CAYNNNNRTG 5 cut(s) 1070, 1133, 1759, 4437, 4511
SacI GAGCTC 1 cut(s) 1116
SalI GTCGAC 1 cut(s) 793
SapI GCTCTTC 1 cut(s) 3756
ScrFI CCNGG 5 cut(s) 307, 2894, 3006, 3035, 3709
SduI GDGCHC 9 cut(s) 498, 742, 766, 822, 1008, 1116, 2622, 3174, 3421
SfcI CTRYAG 2 cut(s) 801, 2556
Sfr274I CTCGAG 1 cut(s) 2572
SgrAI CRCCGGYG 1 cut(s) 701
SinI GGWCC 4 cut(s) 1217, 1707, 1986, 4067
SlaI CTCGAG 1 cut(s) 2572
SmiMI CAYNNNNRTG 5 cut(s) 1070, 1133, 1759, 4437, 4511
SmlI CTYRAG 5 cut(s) 2572, 2838, 3764, 3964, 4027
SmoI CTYRAG 5 cut(s) 2572, 2838, 3764, 3964, 4027
SpeI ACTAGT 1 cut(s) 4472
SspMI CTAG 8 cut(s) 779, 1170, 2192, 2271, 2613, 3771, 4458, 4473
SstI GAGCTC 1 cut(s) 1116
StyD4I CCNGG 5 cut(s) 305, 2892, 3004, 3033, 3707
StyI CCWWGG 3 cut(s) 294, 2476, 4264
TaiI ACGT 4 cut(s) 912, 3845, 3994, 4395
TaqII GACCGA 1 cut(s) 1502
TatI WGTACW 2 cut(s) 1360, 1894
TauI GCSGC 5 cut(s) 325, 328, 343, 1014, 3878
TspGWI ACGGA 2 cut(s) 201, 4358
Van91I CCANNNNNTGG 2 cut(s) 848, 2041
Vha464I CTTAAG 1 cut(s) 3964
VpaK11BI GGWCC 4 cut(s) 1217, 1707, 1986, 4067
VspI ATTAAT 1 cut(s) 3936
XapI RAATTY 8 cut(s) 730, 1904, 1949, 2197, 2417, 2828, 3130, 3714
XbaI TCTAGA 1 cut(s) 778
XceI RCATGY 4 cut(s) 355, 2545, 4442, 4496
XcmI CCANNNNNNNNNTGG 2 cut(s) 1308, 3017
XhoI CTCGAG 1 cut(s) 2572
XmiI GTMKAC 1 cut(s) 794
XmnI GAANNNNTTC 1 cut(s) 1293
XspI CTAG 8 cut(s) 779, 1170, 2192, 2271, 2613, 3771, 4458, 4473
Zsp2I ATGCAT 1 cut(s) 4494
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.