Rmu_sc0001395.1_g000004

Enhancer of mRNA-decapping protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001395.1
OG0000324
Physical Location & Seq
Reverse (-)
23358 .. 27049
3692 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001395.1_g000004.1.cds

Sequence Viewer

Length: 1842 bp
atgcggcaggtgtgtgctgaccttcttgaggaaatggaattggttttcattgtttctaaggatggaattgatactgtgagagtgggcccgcttaatggggaagtgaagatctggtcctcagcgagtgaagaaggctggctacttcccagtgatgctgagtcatggaaatgtacccagaccttagagttaaaggactctgctcaacctctagttgaggatgcattctttaatcaagtcatagcattgtcacaagctggccttcttttagttgcaaatgctaagaagaatgctatatatgccgtgcacttagaccttggtggtgagccagcatctacatgcatggattacatagcagaatttactgttgcaatgcttattttgagctttactgggacaagtatatcacctcatggtgaacaaatttattgtgtccaaacacaggccattcaacagtatgctttggacttatccaagtgcttacctcccctattggagaattcaggtttagaaaagctcttttgtttccaggcatccgatcttggaattgagatggtcagggattgctgtgcaatatcattagaatcttatattacagatgaagctcggcaaggtgatggtgccagcatgtcagaaccactagcccaccctcattctggagaggaagaccacgatcgctctacaaaagatgtatctgggtcagctaccgccacaaccgcatcacaactacaaacaccaattgcaaagtcgagaaaacagaaatgggacttatccaagtgcttacctcccctattggagaattcaggtttagaaaagctcttttgtttccaggcatccgatcttggaattgagatggtcagggattgctgtgcaatatcattagaatcttatattacagatgaagctcggcaaggtgatggtgccagcatgtcagaaccactagcccaccctcattctggagaggaagaccacgatcgctctacaaaagatgtatctgggtcagctaccgccacaaccgcatcacaactacaaacaccaaatgcaaagtcgagaaaacagaaatggaaaaatatgcaagcatcaggtcaatcttccccatcaccaggtgtgctcaactcaatagagccctctaatgaagcaggtgggagttcaagttatggccaggcaggatatgatgaatcagctaatgactatgcaaaaagaattgcaaaagcagatgacaatgatgtttaccgtcccaattacaaaggaaggcaaacgattagaggcggctctcggtcggactgttgtcgtgcaatcactctagctatggagaaaacaataactttggctatatctgattgctttcagagaggagtgggagataaagcagttaatcaattggaaaaatcagttaactcaaaacttgaagctactgtatccaggcaaatcaacgtgcagtttcgaacatcgggtaaagaagctcttcaagatgctctcaggtccagcatggaagcttcagtggtacctgcctttgagacatcatgtcaatccatttttgagcaagtagatgccacattccagaaaggaatggttgaacatgcaactgtggctcagcagcaatttgagtctgcacaatcgccgttggcccatgctgaagctattagctttgcatcatcagagactcaaaccctaagcggtgaactggctaatggtcaacgtaagttagttgctcttgcagttgcacgggaaaactcaagtgcagtaaattctgactgttgttcaccctgtgtaatgcattgtggtagtgagcattcagatcataatggggcagtctatctggactgttactgcattagaatctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000932 GO:0000956 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009892 GO:0009933 GO:0009965 GO:0009987 GO:0010014 GO:0010015 GO:0010016 GO:0010033 GO:0010071 GO:0010072 GO:0010154 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022414 GO:0022622 GO:0023052 GO:0031086 GO:0031087 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0046983 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048508 GO:0048519 GO:0048532 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0090304 GO:0090305 GO:0090421 GO:0097159 GO:0099402 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1905392 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Ge1_WD40

Protein Analysis

613

Amino Acids

66.18

Weight (kDa)

4.85

Isoelectric Point (pI)

42.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000324)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13290 AT3G13300 AT3G13300 AT3G13300
fragaria_vesca FvH4_3g41972 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g42780 FvH4_3g42790 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_4g01881 FvH4_7g10420
malus_domestica MD00G1013700.v1.1 MD03G1039800.v1.1 MD11G1041300.v1.1 MD11G1094900.v1.1
prunus_persica Prupe.6G032100_v2.0.a1
pyrus_communis pycom03g03070 pycom11g03500 pycom11g08470 pycom12g06730
rosa_chinensis RchiOBHm_Chr1g0328831 RchiOBHm_Chr4g0386471 RchiOBHm_Chr4g0386481 RchiOBHm_Chr4g0386551 RchiOBHm_Chr4g0386701 RchiOBHm_Chr4g0386801 RchiOBHm_Chr4g0386811 RchiOBHm_Chr4g0386821 RchiOBHm_Chr4g0386921 RchiOBHm_Chr4g0386931 RchiOBHm_Chr4g0386941 RchiOBHm_Chr4g0387211 RchiOBHm_Chr4g0389101 RchiOBHm_Chr4g0389111 RchiOBHm_Chr4g0389201 RchiOBHm_Chr4g0389211 RchiOBHm_Chr4g0389321 RchiOBHm_Chr4g0389331 RchiOBHm_Chr4g0389341 RchiOBHm_Chr4g0389411 RchiOBHm_Chr5g0075171
rosa_laevigata RLG00000009985 RLG00000009990 RLG00000009996 RLG00000009998 RLG00000010136 RLG00000010140 RLG00000036537
rosa_multiflora Rmu_co8461959.1_g000001 Rmu_sc0000013.1_g000017 Rmu_sc0000013.1_g000024 Rmu_sc0001015.1_g000001 Rmu_sc0001395.1_g000004 Rmu_sc0001942.1_g000022 Rmu_sc0002498.1_g000018 Rmu_sc0002498.1_g000020 Rmu_sc0002557.1_g000005 Rmu_sc0002604.1_g000010 Rmu_sc0002604.1_g000011 Rmu_sc0004750.1_g000003 Rmu_sc0006571.1_g000001 Rmu_sc0006571.1_g000014 Rmu_sc0006571.1_g000018 Rmu_sc0008050.1_g000016 Rmu_sc0008066.1_g000009 Rmu_sc0008380.1_g000006 Rmu_sc0008380.1_g000010 Rmu_sc0008380.1_g000012 Rmu_sc0010272.1_g000021 Rmu_sc0010693.1_g000010 Rmu_sc0010693.1_g000012 Rmu_sc0010693.1_g000014 Rmu_sc0010693.1_g000015 Rmu_sc0031790.1_g000003 Rmu_sc0040539.1_g000001 Rmu_ssc0000211.1_g000001 Rmu_ssc0000211.1_g000011 Rmu_ssc0000211.1_g000013
rosa_roxburghii Rroxscaffold_1G00006420 Rroxscaffold_1G00006430 Rroxscaffold_5G00334020 Rroxscaffold_5G00334050 Rroxscaffold_5G00335420
rosa_rugosa Rorug03G0307600 Rorug03G0308600 Rorug03G0322400 Rorug05G0437200 Rorug05G0437200 Rorug05G0437200
rosa_samantha Rh1BG075700 Rh4BG010000 Rh4BG010100 Rh4BG010200 Rh4BG020000 Rh4BG020400 Rh4BG172100 Rh4CG015300 Rh4CG016300 Rh5AG494100 Rh5AG494200 Rh5BG515500 Rh5CG539300 Rh5DG528200
rosa_wichuraiana Rw4G000930 Rw4G001980 Rw4G001990 Rw4G011950 Rw5G045850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1127
Acc36I ACCTGC 2 cut(s) 1127, 1513
Acc65I GGTACC 1 cut(s) 1501
AccB1I GGYRCC 3 cut(s) 617, 917, 1501
AciI CCGC 8 cut(s) 4, 89, 705, 714, 1005, 1014, 1266, 1674
AcoI YGGCCR 1 cut(s) 1156
AcsI RAATTY 5 cut(s) 356, 420, 496, 796, 1744
AcuI CTGAAG 2 cut(s) 1479, 1653
AdeI CACNNNGTG 2 cut(s) 1103, 1766
AfaI GTAC 2 cut(s) 172, 1503
AfiI CCNNNNNNNGG 6 cut(s) 28, 95, 439, 653, 953, 1100
AgsI TTSAA 5 cut(s) 449, 1149, 1406, 1466, 1574
AhdI GACNNNNNGTC 1 cut(s) 1521
AjnI CCWGG 5 cut(s) 525, 825, 1099, 1158, 1418
Alw21I GWGCWC 2 cut(s) 306, 1110
Alw26I GTCTC 2 cut(s) 1508, 1652
Alw44I GTGCAC 1 cut(s) 302
AoxI GGCC 5 cut(s) 85, 256, 441, 1156, 1623
ApaI GGGCCC 1 cut(s) 89
ApaLI GTGCAC 1 cut(s) 302
ApeKI GCWGC 1 cut(s) 1594
ApoI RAATTY 5 cut(s) 356, 420, 496, 796, 1744
ArsI GACNNNNNNTTYG 2 cut(s) 1028, 1060
Asp700I GAANNNNTTC 1 cut(s) 1461
Asp718I GGTACC 1 cut(s) 1501
AspS9I GGNCC 5 cut(s) 85, 86, 114, 1479, 1624
AsuHPI GGTGA 8 cut(s) 332, 396, 425, 623, 923, 1089, 1688, 1752
AsuII TTCGAA 1 cut(s) 1441
AvaII GGWCC 2 cut(s) 114, 1479
BaeGI GKGCMC 2 cut(s) 89, 306
BalI TGGCCA 1 cut(s) 1158
BanI GGYRCC 3 cut(s) 617, 917, 1501
BanII GRGCYC 2 cut(s) 89, 1125
BarI GAAGNNNNNNTAC 2 cut(s) 123, 155
BbsI GAAGAC 2 cut(s) 669, 969
Bbv12I GWGCWC 2 cut(s) 306, 1110
BbvCI CCTCAGC 1 cut(s) 118
BbvI GCAGC 1 cut(s) 1606
BccI CCATC 6 cut(s) 56, 544, 608, 844, 908, 1102
BceAI ACGGC 2 cut(s) 284, 1603
BciT130I CCWGG 5 cut(s) 527, 827, 1101, 1160, 1420
BciVI GTATCC 1 cut(s) 1426
BcoDI GTCTC 2 cut(s) 1508, 1652
BfaI CTAG 4 cut(s) 209, 638, 938, 1301
BfuAI ACCTGC 2 cut(s) 1127, 1513
BfuI GTATCC 1 cut(s) 1426
BglII AGATCT 1 cut(s) 108
BisI GCNGC 3 cut(s) 5, 1267, 1595
BlpI GCTNAGC 1 cut(s) 1590
BlsI GCNGC 3 cut(s) 6, 1268, 1596
Bme1390I CCNGG 5 cut(s) 527, 827, 1101, 1160, 1420
Bme18I GGWCC 2 cut(s) 114, 1479
BmeRI GACNNNNNGTC 1 cut(s) 1521
BmgT120I GGNCC 5 cut(s) 85, 86, 114, 1479, 1624
BmiI GGNNCC 4 cut(s) 87, 619, 919, 1503
BmrFI CCNGG 5 cut(s) 527, 827, 1101, 1160, 1420
BmrI ACTGGG 2 cut(s) 141, 399
BmuI ACTGGG 2 cut(s) 141, 399
BoxI GACNNNNGTC 1 cut(s) 1284
BpiI GAAGAC 2 cut(s) 669, 969
BpmI CTGGAG 2 cut(s) 675, 975
Bpu10I CCTNAGC 2 cut(s) 118, 1670
Bpu1102I GCTNAGC 1 cut(s) 1590
Bpu14I TTCGAA 1 cut(s) 1441
BpuEI CTTGAG 2 cut(s) 47, 1717
BsaJI CCNNGG 1 cut(s) 313
BsaXI ACNNNNNCTCC 2 cut(s) 1135, 1165
Bsc4I CCNNNNNNNGG 6 cut(s) 28, 95, 439, 653, 953, 1100
Bse1I ACTGG 3 cut(s) 147, 394, 1686
Bse3DI GCAATG 1 cut(s) 375
BseBI CCWGG 5 cut(s) 527, 827, 1101, 1160, 1420
BseDI CCNNGG 1 cut(s) 313
BseGI GGATG 4 cut(s) 67, 223, 530, 830
BseLI CCNNNNNNNGG 6 cut(s) 28, 95, 439, 653, 953, 1100
BseMI GCAATG 1 cut(s) 375
BseMII CTCAG 4 cut(s) 132, 147, 1489, 1604
BseNI ACTGG 3 cut(s) 147, 394, 1686
BseRI GAGGAG 1 cut(s) 1365
BseSI GKGCMC 2 cut(s) 89, 306
BseXI GCAGC 1 cut(s) 1606
BsgI GTGCAG 3 cut(s) 1454, 1593, 1758
Bsh1285I CGRYCG 3 cut(s) 673, 973, 1277
BshFI GGCC 5 cut(s) 87, 258, 443, 1158, 1625
BshNI GGYRCC 3 cut(s) 617, 917, 1501
BsiEI CGRYCG 3 cut(s) 673, 973, 1277
BsiHKAI GWGCWC 2 cut(s) 306, 1110
BslFI GGGAC 3 cut(s) 406, 776, 1218
BslI CCNNNNNNNGG 6 cut(s) 28, 95, 439, 653, 953, 1100
BsmAI GTCTC 2 cut(s) 1508, 1652
BsmFI GGGAC 3 cut(s) 406, 776, 1218
BsmI GAATGC 3 cut(s) 221, 292, 1789
BsnI GGCC 5 cut(s) 87, 258, 443, 1158, 1625
Bsp119I TTCGAA 1 cut(s) 1441
Bsp120I GGGCCC 1 cut(s) 85
Bsp1286I GDGCHC 4 cut(s) 89, 306, 1110, 1125
Bsp143I GATC 6 cut(s) 108, 535, 670, 835, 970, 1795
Bsp1720I GCTNAGC 1 cut(s) 1590
BspACI CCGC 8 cut(s) 4, 89, 705, 714, 1005, 1014, 1266, 1674
BspANI GGCC 5 cut(s) 87, 258, 443, 1158, 1625
BspCNI CTCAG 4 cut(s) 131, 148, 1488, 1603
BspLI GGNNCC 4 cut(s) 87, 619, 919, 1503
BspMI ACCTGC 2 cut(s) 1127, 1513
BspQI GCTCTTC 1 cut(s) 1467
BspT104I TTCGAA 1 cut(s) 1441
BspT107I GGYRCC 3 cut(s) 617, 917, 1501
BsrDI GCAATG 1 cut(s) 375
BsrI ACTGG 3 cut(s) 147, 394, 1686
BssECI CCNNGG 1 cut(s) 313
BssMI GATC 6 cut(s) 108, 535, 670, 835, 970, 1795
BssT1I CCWWGG 1 cut(s) 313
Bst2UI CCWGG 5 cut(s) 527, 827, 1101, 1160, 1420
Bst4CI ACNGT 9 cut(s) 76, 364, 453, 1232, 1283, 1414, 1585, 1754, 1823
Bst6I CTCTTC 1 cut(s) 1467
BstBI TTCGAA 1 cut(s) 1441
BstC8I GCNNGC 7 cut(s) 89, 137, 256, 327, 622, 922, 1074
BstDEI CTNAG 9 cut(s) 57, 118, 156, 181, 279, 307, 1475, 1590, 1670
BstENI CCTNNNNNAGG 1 cut(s) 26
BstF5I GGATG 4 cut(s) 67, 223, 530, 830
BstKTI GATC 6 cut(s) 111, 538, 673, 838, 973, 1798
BstMAI GTCTC 2 cut(s) 1508, 1652
BstMBI GATC 6 cut(s) 108, 535, 670, 835, 970, 1795
BstMCI CGRYCG 3 cut(s) 673, 973, 1277
BstMWI GCNNNNNNNGC 4 cut(s) 296, 713, 1013, 1586
BstNI CCWGG 5 cut(s) 527, 827, 1101, 1160, 1420
BstNSI RCATGY 4 cut(s) 339, 628, 928, 1580
BstPAI GACNNNNGTC 1 cut(s) 1284
BstSCI CCNGG 5 cut(s) 525, 825, 1099, 1158, 1418
BstSLI GKGCMC 2 cut(s) 89, 306
BstV1I GCAGC 1 cut(s) 1606
BstV2I GAAGAC 2 cut(s) 669, 969
BstX2I RGATCY 1 cut(s) 108
BstYI RGATCY 1 cut(s) 108
BsuI GTATCC 1 cut(s) 1426
BsuRI GGCC 5 cut(s) 87, 258, 443, 1158, 1625
BtsCI GGATG 4 cut(s) 67, 223, 530, 830
BtsIMutI CAGTG 2 cut(s) 154, 1503
BveI ACCTGC 2 cut(s) 1127, 1513
Cac8I GCNNGC 7 cut(s) 89, 137, 256, 327, 622, 922, 1074
Cfr13I GGNCC 5 cut(s) 85, 86, 114, 1479, 1624
CsiI ACCWGGT 1 cut(s) 1099
Csp6I GTAC 2 cut(s) 171, 1502
CviQI GTAC 2 cut(s) 171, 1502
DdeI CTNAG 9 cut(s) 57, 118, 156, 181, 279, 307, 1475, 1590, 1670
DpnI GATC 6 cut(s) 110, 537, 672, 837, 972, 1797
DpnII GATC 6 cut(s) 108, 535, 670, 835, 970, 1795
DraIII CACNNNGTG 2 cut(s) 1103, 1766
DriI GACNNNNNGTC 1 cut(s) 1521
EaeI YGGCCR 1 cut(s) 1156
Eam1104I CTCTTC 1 cut(s) 1467
Eam1105I GACNNNNNGTC 1 cut(s) 1521
EarI CTCTTC 1 cut(s) 1467
Eco130I CCWWGG 1 cut(s) 313
Eco24I GRGCYC 2 cut(s) 89, 1125
Eco47I GGWCC 2 cut(s) 114, 1479
Eco57I CTGAAG 2 cut(s) 1479, 1653
EcoNI CCTNNNNNAGG 1 cut(s) 26
EcoRI GAATTC 2 cut(s) 496, 796
EcoRII CCWGG 5 cut(s) 525, 825, 1099, 1158, 1418
EcoT14I CCWWGG 1 cut(s) 313
EcoT22I ATGCAT 3 cut(s) 223, 341, 1776
EcoT38I GRGCYC 2 cut(s) 89, 1125
ErhI CCWWGG 1 cut(s) 313
FalI AAGNNNNNCTT 4 cut(s) 243, 275, 1446, 1478
FaqI GGGAC 3 cut(s) 406, 776, 1218
FauI CCCGC 1 cut(s) 96
Fnu4HI GCNGC 3 cut(s) 5, 1267, 1595
FokI GGATG 4 cut(s) 74, 230, 517, 817
FriOI GRGCYC 2 cut(s) 89, 1125
Fsp4HI GCNGC 3 cut(s) 5, 1267, 1595
FspBI CTAG 4 cut(s) 209, 638, 938, 1301
GluI GCNGC 3 cut(s) 5, 1267, 1595
GsuI CTGGAG 2 cut(s) 675, 975
HaeIII GGCC 5 cut(s) 87, 258, 443, 1158, 1625
HincII GTYRAC 2 cut(s) 1393, 1694
HindII GTYRAC 2 cut(s) 1393, 1694
HindIII AAGCTT 1 cut(s) 1491
HinfI GANTC 8 cut(s) 158, 194, 581, 881, 1175, 1604, 1660, 1836
HpaI GTTAAC 1 cut(s) 1393
HphI GGTGA 8 cut(s) 332, 396, 425, 623, 923, 1089, 1688, 1752
Hpy166II GTNNAC 7 cut(s) 304, 416, 1228, 1393, 1679, 1694, 1760
Hpy188III TCNNGA 8 cut(s) 26, 654, 747, 954, 1047, 1466, 1558, 1817
Hpy8I GTNNAC 7 cut(s) 304, 416, 1228, 1393, 1679, 1694, 1760
HpyAV CCTTC 4 cut(s) 32, 125, 269, 1242
HpyCH4III ACNGT 9 cut(s) 76, 364, 453, 1232, 1283, 1414, 1585, 1754, 1823
HpyCH4IV ACGT 2 cut(s) 1431, 1696
HpyF10VI GCNNNNNNNGC 4 cut(s) 296, 713, 1013, 1586
HpyF3I CTNAG 9 cut(s) 57, 118, 156, 181, 279, 307, 1475, 1590, 1670
HpySE526I ACGT 2 cut(s) 1431, 1696
KpnI GGTACC 1 cut(s) 1505
KspAI GTTAAC 1 cut(s) 1393
Kzo9I GATC 6 cut(s) 108, 535, 670, 835, 970, 1795
LguI GCTCTTC 1 cut(s) 1467
Lsp1109I GCAGC 1 cut(s) 1606
MabI ACCWGGT 1 cut(s) 1099
MaeI CTAG 4 cut(s) 209, 638, 938, 1301
MaeII ACGT 2 cut(s) 1431, 1696
MaeIII GTNAC 2 cut(s) 246, 1823
MalI GATC 6 cut(s) 110, 537, 672, 837, 972, 1797
MboI GATC 6 cut(s) 108, 535, 670, 835, 970, 1795
MboII GAAGA 7 cut(s) 118, 140, 295, 674, 974, 1080, 1454
MfeI CAATTG 2 cut(s) 735, 1376
MflI RGATCY 1 cut(s) 108
MhlI GDGCHC 4 cut(s) 89, 306, 1110, 1125
MlsI TGGCCA 1 cut(s) 1158
MluNI TGGCCA 1 cut(s) 1158
MlyI GAGTC 4 cut(s) 167, 188, 1613, 1654
MmeI TCCRAC 1 cut(s) 1257
Mox20I TGGCCA 1 cut(s) 1158
Mph1103I ATGCAT 3 cut(s) 223, 341, 1776
MroXI GAANNNNTTC 1 cut(s) 1461
MscI TGGCCA 1 cut(s) 1158
MseI TTAA 5 cut(s) 93, 188, 228, 1371, 1392
MslI CAYNNNNRTG 2 cut(s) 166, 334
Msp20I TGGCCA 1 cut(s) 1158
MspR9I CCNGG 5 cut(s) 527, 827, 1101, 1160, 1420
MunI CAATTG 2 cut(s) 735, 1376
Mva1269I GAATGC 3 cut(s) 221, 292, 1789
MvaI CCWGG 5 cut(s) 527, 827, 1101, 1160, 1420
MwoI GCNNNNNNNGC 4 cut(s) 296, 713, 1013, 1586
NdeII GATC 6 cut(s) 108, 535, 670, 835, 970, 1795
NlaIV GGNNCC 4 cut(s) 87, 619, 919, 1503
NmeAIII GCCGAG 2 cut(s) 583, 883
NmuCI GTSAC 1 cut(s) 246
NsiI ATGCAT 3 cut(s) 223, 341, 1776
NspI RCATGY 4 cut(s) 339, 628, 928, 1580
NspV TTCGAA 1 cut(s) 1441
PaqCI CACCTGC 1 cut(s) 1127
PciSI GCTCTTC 1 cut(s) 1467
PctI GAATGC 3 cut(s) 221, 292, 1789
PdmI GAANNNNTTC 1 cut(s) 1461
PfeI GAWTC 4 cut(s) 581, 881, 1175, 1836
PkrI GCNGC 3 cut(s) 6, 1268, 1596
Ple19I CGATCG 2 cut(s) 673, 973
PleI GAGTC 4 cut(s) 166, 188, 1612, 1654
PpsI GAGTC 4 cut(s) 166, 188, 1612, 1654
PshAI GACNNNNGTC 1 cut(s) 1284
Psp6I CCWGG 5 cut(s) 525, 825, 1099, 1158, 1418
PspGI CCWGG 5 cut(s) 525, 825, 1099, 1158, 1418
PspN4I GGNNCC 4 cut(s) 87, 619, 919, 1503
PspOMI GGGCCC 1 cut(s) 85
PspPI GGNCC 5 cut(s) 85, 86, 114, 1479, 1624
PsuI RGATCY 1 cut(s) 108
PvuI CGATCG 2 cut(s) 673, 973
RsaI GTAC 2 cut(s) 172, 1503
RsaNI GTAC 2 cut(s) 171, 1502
RseI CAYNNNNRTG 2 cut(s) 166, 334
SapI GCTCTTC 1 cut(s) 1467
SaqAI TTAA 5 cut(s) 93, 188, 228, 1371, 1392
SatI GCNGC 3 cut(s) 5, 1267, 1595
Sau3AI GATC 6 cut(s) 108, 535, 670, 835, 970, 1795
Sau96I GGNCC 5 cut(s) 85, 86, 114, 1479, 1624
SchI GAGTC 4 cut(s) 167, 188, 1613, 1654
ScrFI CCNGG 5 cut(s) 527, 827, 1101, 1160, 1420
SduI GDGCHC 4 cut(s) 89, 306, 1110, 1125
SexAI ACCWGGT 1 cut(s) 1099
SfuI TTCGAA 1 cut(s) 1441
SinI GGWCC 2 cut(s) 114, 1479
SmiMI CAYNNNNRTG 2 cut(s) 166, 334
SmlI CTYRAG 2 cut(s) 26, 1732
SmoI CTYRAG 2 cut(s) 26, 1732
SsiI CCGC 8 cut(s) 4, 89, 705, 714, 1005, 1014, 1266, 1674
SspMI CTAG 4 cut(s) 209, 638, 938, 1301
StyD4I CCNGG 5 cut(s) 525, 825, 1099, 1158, 1418
StyI CCWWGG 1 cut(s) 313
TaaI ACNGT 9 cut(s) 76, 364, 453, 1232, 1283, 1414, 1585, 1754, 1823
TaiI ACGT 2 cut(s) 1434, 1699
TaqI TCGA 3 cut(s) 746, 1046, 1441
TaqII GACCGA 1 cut(s) 1263
TauI GCSGC 2 cut(s) 7, 1269
TfiI GAWTC 4 cut(s) 581, 881, 1175, 1836
Tru1I TTAA 5 cut(s) 93, 188, 228, 1371, 1392
Tru9I TTAA 5 cut(s) 93, 188, 228, 1371, 1392
TscAI CASTG 2 cut(s) 154, 1503
TseFI GTSAC 1 cut(s) 246
TseI GCWGC 1 cut(s) 1594
Tsp45I GTSAC 1 cut(s) 246
TspDTI ATGAA 5 cut(s) 37, 612, 912, 1146, 1188
TspRI CASTG 2 cut(s) 154, 1503
VneI GTGCAC 1 cut(s) 302
VpaK11BI GGWCC 2 cut(s) 114, 1479
XagI CCTNNNNNAGG 1 cut(s) 26
XapI RAATTY 5 cut(s) 356, 420, 496, 796, 1744
XceI RCATGY 4 cut(s) 339, 628, 928, 1580
XcmI CCANNNNNNNNNTGG 2 cut(s) 650, 950
XmnI GAANNNNTTC 1 cut(s) 1461
XspI CTAG 4 cut(s) 209, 638, 938, 1301
Zsp2I ATGCAT 3 cut(s) 223, 341, 1776
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.