Rw4G001990

Enhancer of mRNA-decapping protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr4
OG0000324
Physical Location & Seq
Forward (+)
3630899 .. 3634015
3117 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw4G001990.1

Sequence Viewer

Length: 1518 bp
ATGGCTTTCTTTGCCGAGGACGTTCACCTTTTGGCTAGTGTGAGTGTAGGAGGATGGCTTTTTGTGTGGAAAATTTCTGAAGGTCCAGATGAAGGAGGTATGCCACAAATCACAGGAAAGATTGTTATTGCCATTCAAATAGTTGGTGAGTGGGAAGCTGTTCATCCACGAGTTTGTTGGCACTATCATATACAAGATGTTCTCGTTGTTGGGGTTGGGAAGTGTGTTCTACAAATTGATGCTACTAAAGTTGCAAAGGGTGAAGTCCCTTCTGCTGAGGTTCCTATTAAGTGTCCTGTTGAAAAGCTCATTGATGGGGTCCAATTTGTTGGTAAACATGATGGAGAGGTGACAGATTTATCAATGTGCCAATGGATGACCACCCGGCTGGTTTCTGCTTCTATGGATGGAACTATCTTGGAAGATCGCAAGTCGCAACCACTTTTACTACTGAGACCCTATGATGGCCTTCCTGTTTATTCGTCTACATTTGTGACAGCTCCCAACAGGCCTGATCACATCATACTTATAACATGGGGCCCGCTTAATCGGGAAGTGAAGATCTGGTCCTCAGCGAGTGAAGAAGGCTGGCTACTTCCCAGTGATGCTGAGTCATGGAAATGTACCCGGACCTTAGAGTTAAAGGGCTCTGCTCAACCTCGAGTTGAGGATGCATTCTTTAATCAAGTCATAGCATTGTCACAAGCTGGCCTTCTTTTACTTGCAAATGCTAAGAAGAATGCTATATATGCTGTGCACTTAGACCTTGGTGGTGAGCCAGCATCTACATGCATGGATTACAGAGCAGAATTTACAATGCTTATTTTGAGCTTTACTGGGACAAGTATATCACCTCATGGTGAACAAATTTATTGTGTCCAAACACAAGCCATTCAACAGTATGCTTTGGACTTATCCAAGTGCTTACCTCCCCTATTGGAGAATTCAGGTTTAGAAAAGTTCTTTTGTTTCCAGGCATCTGATCTTGGAATTGAGATGGCCTGGGATTGCTGTGCAATATCATTACAATCTTATAATACAGATGAAGCTCGGCAAGGTGATGGTGCCAGCATGTCAGAACCACTAGCCCAGCCTCATTCTGGAGAGGAAGACCACGATCGCTCTACAAAAGATGTATCTGGGTCAGCTACCGCCACAACCGCATCACAACTACAAACACCAAATGCAAAGTCGAGAAAACAGAAATGGAAAAATATGCAAGCATCAGGTCAATCTTCCCCATCACCAGGTGTGCTCAACTCAATAGAGCCCTCTAATGAAGCAGGTGGGAGTTCAAGTCCCCCCTCCGGAGAAGCTGCATTTCCTCAAATTATGGCCAGGCCGGATATGATGAATCAGCTAATGACTATGCAAAAAGAATTGCAAAAGCAGATGACAATGATGGTTACTGTCCCAATTACAAAGGAAGGCAAACGATTAGAAGCGGCTCTCGGTCGGAGTATGGAGAAGGCTGTAAAGGCCAATAATTTGCTTTGTGGGCTTGGTTTCAAGAAGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000932 GO:0000956 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009892 GO:0009933 GO:0009965 GO:0009987 GO:0010014 GO:0010015 GO:0010016 GO:0010033 GO:0010071 GO:0010072 GO:0010154 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022414 GO:0022622 GO:0023052 GO:0031086 GO:0031087 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0046983 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048508 GO:0048519 GO:0048532 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0090304 GO:0090305 GO:0090421 GO:0097159 GO:0099402 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1905392 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Ge1_WD40

Protein Analysis

505

Amino Acids

55.05

Weight (kDa)

5.34

Isoelectric Point (pI)

46.11

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000324)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13290 AT3G13300 AT3G13300 AT3G13300
fragaria_vesca FvH4_3g41972 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g42780 FvH4_3g42790 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_4g01881 FvH4_7g10420
malus_domestica MD00G1013700.v1.1 MD03G1039800.v1.1 MD11G1041300.v1.1 MD11G1094900.v1.1
prunus_persica Prupe.6G032100_v2.0.a1
pyrus_communis pycom03g03070 pycom11g03500 pycom11g08470 pycom12g06730
rosa_chinensis RchiOBHm_Chr1g0328831 RchiOBHm_Chr4g0386471 RchiOBHm_Chr4g0386481 RchiOBHm_Chr4g0386551 RchiOBHm_Chr4g0386701 RchiOBHm_Chr4g0386801 RchiOBHm_Chr4g0386811 RchiOBHm_Chr4g0386821 RchiOBHm_Chr4g0386921 RchiOBHm_Chr4g0386931 RchiOBHm_Chr4g0386941 RchiOBHm_Chr4g0387211 RchiOBHm_Chr4g0389101 RchiOBHm_Chr4g0389111 RchiOBHm_Chr4g0389201 RchiOBHm_Chr4g0389211 RchiOBHm_Chr4g0389321 RchiOBHm_Chr4g0389331 RchiOBHm_Chr4g0389341 RchiOBHm_Chr4g0389411 RchiOBHm_Chr5g0075171
rosa_laevigata RLG00000009985 RLG00000009990 RLG00000009996 RLG00000009998 RLG00000010136 RLG00000010140 RLG00000036537
rosa_multiflora Rmu_co8461959.1_g000001 Rmu_sc0000013.1_g000017 Rmu_sc0000013.1_g000024 Rmu_sc0001015.1_g000001 Rmu_sc0001395.1_g000004 Rmu_sc0001942.1_g000022 Rmu_sc0002498.1_g000018 Rmu_sc0002498.1_g000020 Rmu_sc0002557.1_g000005 Rmu_sc0002604.1_g000010 Rmu_sc0002604.1_g000011 Rmu_sc0004750.1_g000003 Rmu_sc0006571.1_g000001 Rmu_sc0006571.1_g000014 Rmu_sc0006571.1_g000018 Rmu_sc0008050.1_g000016 Rmu_sc0008066.1_g000009 Rmu_sc0008380.1_g000006 Rmu_sc0008380.1_g000010 Rmu_sc0008380.1_g000012 Rmu_sc0010272.1_g000021 Rmu_sc0010693.1_g000010 Rmu_sc0010693.1_g000012 Rmu_sc0010693.1_g000014 Rmu_sc0010693.1_g000015 Rmu_sc0031790.1_g000003 Rmu_sc0040539.1_g000001 Rmu_ssc0000211.1_g000001 Rmu_ssc0000211.1_g000011 Rmu_ssc0000211.1_g000013
rosa_roxburghii Rroxscaffold_1G00006420 Rroxscaffold_1G00006430 Rroxscaffold_5G00334020 Rroxscaffold_5G00334050 Rroxscaffold_5G00335420
rosa_rugosa Rorug03G0307600 Rorug03G0308600 Rorug03G0322400 Rorug05G0437200 Rorug05G0437200 Rorug05G0437200
rosa_samantha Rh1BG075700 Rh4BG010000 Rh4BG010100 Rh4BG010200 Rh4BG020000 Rh4BG020400 Rh4BG172100 Rh4CG015300 Rh4CG016300 Rh5AG494100 Rh5AG494200 Rh5BG515500 Rh5CG539300 Rh5DG528200
rosa_wichuraiana Rw4G000930 Rw4G001980 Rw4G001990 Rw4G011950 Rw5G045850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 530, 1035
AarI CACCTGC 1 cut(s) 1274
Acc36I ACCTGC 1 cut(s) 1274
AccB1I GGYRCC 1 cut(s) 1064
AccI GTMKAC 1 cut(s) 485
AccIII TCCGGA 1 cut(s) 1307
AciI CCGC 4 cut(s) 542, 1152, 1161, 1445
AcoI YGGCCR 1 cut(s) 1335
AcsI RAATTY 4 cut(s) 72, 809, 867, 943
AcuI CTGAAG 1 cut(s) 99
AdeI CACNNNGTG 1 cut(s) 1250
AfaI GTAC 1 cut(s) 625
AfiI CCNNNNNNNGG 5 cut(s) 92, 464, 1100, 1247, 1307
AgsI TTSAA 5 cut(s) 137, 302, 896, 1296, 1510
AjnI CCWGG 4 cut(s) 972, 1001, 1246, 1337
AluBI AGCT 9 cut(s) 158, 307, 500, 707, 831, 1049, 1148, 1316, 1360
AluI AGCT 9 cut(s) 158, 307, 500, 707, 831, 1049, 1148, 1316, 1360
Alw21I GWGCWC 2 cut(s) 759, 1257
Alw26I GTCTC 1 cut(s) 448
Alw44I GTGCAC 1 cut(s) 755
Ama87I CYCGRG 1 cut(s) 660
Aor13HI TCCGGA 1 cut(s) 1307
AoxI GGCC 8 cut(s) 466, 509, 538, 709, 999, 1335, 1340, 1479
ApaI GGGCCC 1 cut(s) 542
ApaLI GTGCAC 1 cut(s) 755
ApeKI GCWGC 1 cut(s) 1316
ApoI RAATTY 4 cut(s) 72, 809, 867, 943
ArsI GACNNNNNNTTYG 2 cut(s) 1175, 1207
Asp700I GAANNNNTTC 1 cut(s) 159
AspS9I GGNCC 6 cut(s) 83, 319, 538, 539, 567, 630
AsuC2I CCSGG 2 cut(s) 385, 628
AsuHPI GGTGA 9 cut(s) 17, 158, 272, 361, 785, 843, 872, 1070, 1236
AvaI CYCGRG 1 cut(s) 660
AvaII GGWCC 4 cut(s) 83, 319, 567, 630
BaeGI GKGCMC 2 cut(s) 542, 759
BalI TGGCCA 1 cut(s) 1337
BanI GGYRCC 1 cut(s) 1064
BanII GRGCYC 3 cut(s) 542, 650, 1272
BarI GAAGNNNNNNTAC 2 cut(s) 576, 608
BauI CACGAG 1 cut(s) 168
BbsI GAAGAC 1 cut(s) 1116
Bbv12I GWGCWC 2 cut(s) 759, 1257
BbvCI CCTCAGC 2 cut(s) 276, 571
BbvI GCAGC 1 cut(s) 1303
BccI CCATC 9 cut(s) 48, 308, 335, 401, 458, 991, 1055, 1249, 1396
BciT130I CCWGG 4 cut(s) 974, 1003, 1248, 1339
BclI TGATCA 1 cut(s) 514
BcnI CCSGG 2 cut(s) 385, 628
BcoDI GTCTC 1 cut(s) 448
BfaI CTAG 2 cut(s) 36, 1085
BfuAI ACCTGC 1 cut(s) 1274
BglII AGATCT 1 cut(s) 561
BisI GCNGC 2 cut(s) 1317, 1446
BlsI GCNGC 2 cut(s) 1318, 1447
Bme1390I CCNGG 6 cut(s) 385, 628, 974, 1003, 1248, 1339
Bme18I GGWCC 4 cut(s) 83, 319, 567, 630
BmeT110I CYCGRG 1 cut(s) 660
BmgT120I GGNCC 6 cut(s) 83, 319, 538, 539, 567, 630
BmiI GGNNCC 5 cut(s) 282, 320, 539, 540, 1066
BmrFI CCNGG 6 cut(s) 385, 628, 974, 1003, 1248, 1339
BmrI ACTGGG 2 cut(s) 594, 846
BmsI GCATC 7 cut(s) 229, 595, 661, 791, 986, 1172, 1232
BmuI ACTGGG 2 cut(s) 594, 846
BpiI GAAGAC 1 cut(s) 1116
BpmI CTGGAG 1 cut(s) 1122
Bpu10I CCTNAGC 2 cut(s) 276, 571
BpuMI CCSGG 2 cut(s) 385, 628
BsaI GGTCTC 1 cut(s) 448
BsaJI CCNNGG 3 cut(s) 15, 766, 1002
BsaWI WCCGGW 1 cut(s) 1307
BsaXI ACNNNNNCTCC 2 cut(s) 1282, 1312
Bsc4I CCNNNNNNNGG 5 cut(s) 92, 464, 1100, 1247, 1307
Bse1I ACTGG 2 cut(s) 600, 841
BseAI TCCGGA 1 cut(s) 1307
BseBI CCWGG 4 cut(s) 974, 1003, 1248, 1339
BseDI CCNNGG 3 cut(s) 15, 766, 1002
BseGI GGATG 5 cut(s) 59, 163, 381, 412, 676
BseLI CCNNNNNNNGG 5 cut(s) 92, 464, 1100, 1247, 1307
BseMII CTCAG 4 cut(s) 267, 443, 585, 600
BseNI ACTGG 2 cut(s) 600, 841
BseSI GKGCMC 2 cut(s) 542, 759
BseXI GCAGC 1 cut(s) 1303
BseYI CCCAGC 1 cut(s) 1089
Bsh1285I CGRYCG 2 cut(s) 1120, 1456
BshFI GGCC 8 cut(s) 468, 511, 540, 711, 1001, 1337, 1342, 1481
BshNI GGYRCC 1 cut(s) 1064
BsiEI CGRYCG 2 cut(s) 1120, 1456
BsiHKAI GWGCWC 2 cut(s) 759, 1257
BsiHKCI CYCGRG 1 cut(s) 660
BsiSI CCGG 4 cut(s) 385, 628, 1308, 1343
BslFI GGGAC 4 cut(s) 251, 853, 1284, 1397
BslI CCNNNNNNNGG 5 cut(s) 92, 464, 1100, 1247, 1307
BsmAI GTCTC 1 cut(s) 448
BsmFI GGGAC 4 cut(s) 251, 853, 1284, 1397
BsmI GAATGC 2 cut(s) 674, 745
BsnI GGCC 8 cut(s) 468, 511, 540, 711, 1001, 1337, 1342, 1481
Bso31I GGTCTC 1 cut(s) 448
BsoBI CYCGRG 1 cut(s) 660
Bsp120I GGGCCC 1 cut(s) 538
Bsp1286I GDGCHC 5 cut(s) 542, 650, 759, 1257, 1272
Bsp13I TCCGGA 1 cut(s) 1307
Bsp143I GATC 5 cut(s) 424, 514, 561, 982, 1117
BspACI CCGC 4 cut(s) 542, 1152, 1161, 1445
BspANI GGCC 8 cut(s) 468, 511, 540, 711, 1001, 1337, 1342, 1481
BspCNI CTCAG 4 cut(s) 268, 444, 584, 601
BspEI TCCGGA 1 cut(s) 1307
BspLI GGNNCC 5 cut(s) 282, 320, 539, 540, 1066
BspMI ACCTGC 1 cut(s) 1274
BspT107I GGYRCC 1 cut(s) 1064
BspTNI GGTCTC 1 cut(s) 448
BsrI ACTGG 2 cut(s) 600, 841
BssECI CCNNGG 3 cut(s) 15, 766, 1002
BssMI GATC 5 cut(s) 424, 514, 561, 982, 1117
BssSI CACGAG 1 cut(s) 168
BssT1I CCWWGG 1 cut(s) 766
Bst2BI CACGAG 1 cut(s) 168
Bst2UI CCWGG 4 cut(s) 974, 1003, 1248, 1339
Bst4CI ACNGT 2 cut(s) 900, 1411
BstC8I GCNNGC 6 cut(s) 542, 590, 709, 780, 1069, 1221
BstDEI CTNAG 7 cut(s) 276, 452, 571, 609, 634, 732, 760
BstF5I GGATG 5 cut(s) 59, 163, 381, 412, 676
BstKTI GATC 5 cut(s) 427, 517, 564, 985, 1120
BstMAI GTCTC 1 cut(s) 448
BstMBI GATC 5 cut(s) 424, 514, 561, 982, 1117
BstMCI CGRYCG 2 cut(s) 1120, 1456
BstMWI GCNNNNNNNGC 5 cut(s) 11, 749, 1160, 1478, 1498
BstNI CCWGG 4 cut(s) 974, 1003, 1248, 1339
BstNSI RCATGY 2 cut(s) 792, 1075
BstSCI CCNGG 6 cut(s) 383, 626, 972, 1001, 1246, 1337
BstSLI GKGCMC 2 cut(s) 542, 759
BstV1I GCAGC 1 cut(s) 1303
BstV2I GAAGAC 1 cut(s) 1116
BstX2I RGATCY 1 cut(s) 561
BstXI CCANNNNNNTGG 2 cut(s) 329, 388
BstYI RGATCY 1 cut(s) 561
BsuRI GGCC 8 cut(s) 468, 511, 540, 711, 1001, 1337, 1342, 1481
BtsCI GGATG 5 cut(s) 59, 163, 381, 412, 676
BtsIMutI CAGTG 1 cut(s) 607
BveI ACCTGC 1 cut(s) 1274
Cac8I GCNNGC 6 cut(s) 542, 590, 709, 780, 1069, 1221
Cfr13I GGNCC 6 cut(s) 83, 319, 538, 539, 567, 630
CsiI ACCWGGT 1 cut(s) 1246
Csp6I GTAC 1 cut(s) 624
CviAII CATG 7 cut(s) 338, 534, 615, 789, 793, 857, 1072
CviQI GTAC 1 cut(s) 624
DdeI CTNAG 7 cut(s) 276, 452, 571, 609, 634, 732, 760
DpnI GATC 5 cut(s) 426, 516, 563, 984, 1119
DpnII GATC 5 cut(s) 424, 514, 561, 982, 1117
DraIII CACNNNGTG 1 cut(s) 1250
EaeI YGGCCR 1 cut(s) 1335
Eco130I CCWWGG 1 cut(s) 766
Eco147I AGGCCT 1 cut(s) 511
Eco24I GRGCYC 3 cut(s) 542, 650, 1272
Eco31I GGTCTC 1 cut(s) 448
Eco47I GGWCC 4 cut(s) 83, 319, 567, 630
Eco57I CTGAAG 1 cut(s) 99
Eco88I CYCGRG 1 cut(s) 660
EcoO109I RGGNCCY 1 cut(s) 538
EcoRI GAATTC 1 cut(s) 943
EcoRII CCWGG 4 cut(s) 972, 1001, 1246, 1337
EcoT14I CCWWGG 1 cut(s) 766
EcoT22I ATGCAT 2 cut(s) 676, 794
EcoT38I GRGCYC 3 cut(s) 542, 650, 1272
ErhI CCWWGG 1 cut(s) 766
FaeI CATG 7 cut(s) 341, 537, 618, 792, 796, 860, 1075
FalI AAGNNNNNCTT 2 cut(s) 696, 728
FaqI GGGAC 4 cut(s) 251, 853, 1284, 1397
FatI CATG 7 cut(s) 337, 533, 614, 788, 792, 856, 1071
FauI CCCGC 1 cut(s) 549
FbaI TGATCA 1 cut(s) 514
FblI GTMKAC 1 cut(s) 485
Fnu4HI GCNGC 2 cut(s) 1317, 1446
FokI GGATG 5 cut(s) 66, 150, 388, 419, 683
FriOI GRGCYC 3 cut(s) 542, 650, 1272
Fsp4HI GCNGC 2 cut(s) 1317, 1446
FspBI CTAG 2 cut(s) 36, 1085
GluI GCNGC 2 cut(s) 1317, 1446
GsaI CCCAGC 1 cut(s) 1093
GsuI CTGGAG 1 cut(s) 1122
HaeIII GGCC 8 cut(s) 468, 511, 540, 711, 1001, 1337, 1342, 1481
HapII CCGG 4 cut(s) 385, 628, 1308, 1343
Hin1II CATG 7 cut(s) 341, 537, 618, 792, 796, 860, 1075
HinfI GANTC 2 cut(s) 611, 1354
HpaII CCGG 4 cut(s) 385, 628, 1308, 1343
HphI GGTGA 9 cut(s) 17, 158, 272, 361, 785, 843, 872, 1070, 1236
Hpy166II GTNNAC 5 cut(s) 25, 335, 486, 757, 863
Hpy188I TCNGA 4 cut(s) 79, 982, 1078, 1458
Hpy188III TCNNGA 6 cut(s) 86, 551, 1101, 1194, 1308, 1510
Hpy8I GTNNAC 5 cut(s) 25, 335, 486, 757, 863
HpyAV CCTTC 8 cut(s) 74, 86, 279, 479, 578, 722, 1421, 1462
HpyCH4III ACNGT 2 cut(s) 900, 1411
HpyCH4IV ACGT 1 cut(s) 21
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 749, 1160, 1478, 1498
HpyF3I CTNAG 7 cut(s) 276, 452, 571, 609, 634, 732, 760
HpySE526I ACGT 1 cut(s) 21
Hsp92II CATG 7 cut(s) 341, 537, 618, 792, 796, 860, 1075
Kpn2I TCCGGA 1 cut(s) 1307
Ksp22I TGATCA 1 cut(s) 514
Kzo9I GATC 5 cut(s) 424, 514, 561, 982, 1117
LmnI GCTCC 1 cut(s) 505
Lsp1109I GCAGC 1 cut(s) 1303
LweI GCATC 7 cut(s) 229, 595, 661, 791, 986, 1172, 1232
MabI ACCWGGT 1 cut(s) 1246
MaeI CTAG 2 cut(s) 36, 1085
MaeII ACGT 1 cut(s) 21
MaeIII GTNAC 4 cut(s) 349, 493, 699, 1405
MalI GATC 5 cut(s) 426, 516, 563, 984, 1119
MboI GATC 5 cut(s) 424, 514, 561, 982, 1117
MboII GAAGA 6 cut(s) 434, 571, 593, 748, 1121, 1227
MflI RGATCY 1 cut(s) 561
MhlI GDGCHC 5 cut(s) 542, 650, 759, 1257, 1272
MlsI TGGCCA 1 cut(s) 1337
MluNI TGGCCA 1 cut(s) 1337
MlyI GAGTC 1 cut(s) 620
MmeI TCCRAC 1 cut(s) 1436
Mox20I TGGCCA 1 cut(s) 1337
Mph1103I ATGCAT 2 cut(s) 676, 794
MroI TCCGGA 1 cut(s) 1307
MroXI GAANNNNTTC 1 cut(s) 159
MscI TGGCCA 1 cut(s) 1337
MseI TTAA 4 cut(s) 288, 546, 641, 681
MslI CAYNNNNRTG 2 cut(s) 619, 787
Msp20I TGGCCA 1 cut(s) 1337
MspI CCGG 4 cut(s) 385, 628, 1308, 1343
MspR9I CCNGG 6 cut(s) 385, 628, 974, 1003, 1248, 1339
Mva1269I GAATGC 2 cut(s) 674, 745
MvaI CCWGG 4 cut(s) 974, 1003, 1248, 1339
MwoI GCNNNNNNNGC 5 cut(s) 11, 749, 1160, 1478, 1498
NciI CCSGG 2 cut(s) 385, 628
NdeII GATC 5 cut(s) 424, 514, 561, 982, 1117
NlaIII CATG 7 cut(s) 341, 537, 618, 792, 796, 860, 1075
NlaIV GGNNCC 5 cut(s) 282, 320, 539, 540, 1066
NmeAIII GCCGAG 2 cut(s) 40, 1030
NmuCI GTSAC 3 cut(s) 349, 493, 699
NsiI ATGCAT 2 cut(s) 676, 794
NspI RCATGY 2 cut(s) 792, 1075
PaeR7I CTCGAG 1 cut(s) 660
PaqCI CACCTGC 1 cut(s) 1274
PceI AGGCCT 1 cut(s) 511
PctI GAATGC 2 cut(s) 674, 745
PdmI GAANNNNTTC 1 cut(s) 159
PfeI GAWTC 1 cut(s) 1354
PkrI GCNGC 2 cut(s) 1318, 1447
Ple19I CGATCG 1 cut(s) 1120
PleI GAGTC 1 cut(s) 619
PpsI GAGTC 1 cut(s) 619
PsiI TTATAA 2 cut(s) 530, 1035
Psp6I CCWGG 4 cut(s) 972, 1001, 1246, 1337
PspFI CCCAGC 1 cut(s) 1089
PspGI CCWGG 4 cut(s) 972, 1001, 1246, 1337
PspN4I GGNNCC 5 cut(s) 282, 320, 539, 540, 1066
PspOMI GGGCCC 1 cut(s) 538
PspPI GGNCC 6 cut(s) 83, 319, 538, 539, 567, 630
PspXI VCTCGAGB 1 cut(s) 660
PsuI RGATCY 1 cut(s) 561
PvuI CGATCG 1 cut(s) 1120
RsaI GTAC 1 cut(s) 625
RsaNI GTAC 1 cut(s) 624
RseI CAYNNNNRTG 2 cut(s) 619, 787
SaqAI TTAA 4 cut(s) 288, 546, 641, 681
SatI GCNGC 2 cut(s) 1317, 1446
Sau3AI GATC 5 cut(s) 424, 514, 561, 982, 1117
Sau96I GGNCC 6 cut(s) 83, 319, 538, 539, 567, 630
SchI GAGTC 1 cut(s) 620
ScrFI CCNGG 6 cut(s) 385, 628, 974, 1003, 1248, 1339
SduI GDGCHC 5 cut(s) 542, 650, 759, 1257, 1272
SexAI ACCWGGT 1 cut(s) 1246
SfaNI GCATC 7 cut(s) 229, 595, 661, 791, 986, 1172, 1232
Sfr274I CTCGAG 1 cut(s) 660
SinI GGWCC 4 cut(s) 83, 319, 567, 630
SlaI CTCGAG 1 cut(s) 660
SmiMI CAYNNNNRTG 2 cut(s) 619, 787
SmlI CTYRAG 1 cut(s) 660
SmoI CTYRAG 1 cut(s) 660
SseBI AGGCCT 1 cut(s) 511
SsiI CCGC 4 cut(s) 542, 1152, 1161, 1445
SspMI CTAG 2 cut(s) 36, 1085
StuI AGGCCT 1 cut(s) 511
StyD4I CCNGG 6 cut(s) 383, 626, 972, 1001, 1246, 1337
StyI CCWWGG 1 cut(s) 766
TaaI ACNGT 2 cut(s) 900, 1411
TaiI ACGT 1 cut(s) 24
TaqI TCGA 2 cut(s) 661, 1193
TaqII GACCGA 1 cut(s) 1442
TauI GCSGC 1 cut(s) 1448
TfiI GAWTC 1 cut(s) 1354
Tru1I TTAA 4 cut(s) 288, 546, 641, 681
Tru9I TTAA 4 cut(s) 288, 546, 641, 681
TscAI CASTG 1 cut(s) 607
TseFI GTSAC 3 cut(s) 349, 493, 699
TseI GCWGC 1 cut(s) 1316
Tsp45I GTSAC 3 cut(s) 349, 493, 699
TspDTI ATGAA 5 cut(s) 105, 152, 1059, 1293, 1367
TspRI CASTG 1 cut(s) 607
VneI GTGCAC 1 cut(s) 755
VpaK11BI GGWCC 4 cut(s) 83, 319, 567, 630
XapI RAATTY 4 cut(s) 72, 809, 867, 943
XceI RCATGY 2 cut(s) 792, 1075
XcmI CCANNNNNNNNNTGG 2 cut(s) 174, 1097
XhoI CTCGAG 1 cut(s) 660
XmiI GTMKAC 1 cut(s) 485
XmnI GAANNNNTTC 1 cut(s) 159
XspI CTAG 2 cut(s) 36, 1085
Zsp2I ATGCAT 2 cut(s) 676, 794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.