Rroxscaffold_5G00335420

Enhancer of mRNA-decapping protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000005
OG0000324
Physical Location & Seq
Forward (+)
2800599 .. 2810106
9508 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_5G00335420.1

Sequence Viewer

Length: 1350 bp
ATGGCTTTCTTTGCCGAGGACGTTCACCTTTTGGCTAGTGTGAGTGTAGGAGGATGGCTTTTTGTGTGGAAAATTTCTGAAGGTCCAGATGAAGGAGGTATGCCACAAATCACAGGAAAGATTGTTATTGCCATTCAAATAGTTGGTGAGTGGGAAGCTGTTCATCCACGAGTTTGTTGGCACTATCATATACAAGATGTTCTCGTTGTTGGGGTTGGGAAGTGTGTTCTACAAATTGATGCTACTAAAGTTGCAAAGGGTGAAGTCCCTTCTGCTGAGTTTCCTATTAAGTGTCCTGTTGAAAAGCTCATTGATGGGGTCCAATTTGTTGGTAAACATGATGGAGAGGTGACAGATTTATCAATGTGCCAATGGATGACCACCCGGCTGGTTTCTGCTTCTATGGATGGAACTATCTTGGAAGATCGCAAGTCGCAACCACTTTTACTACTGAGACCCTATGATGGCCTTCCTGTTTATTCGTCTACATTTGTGACAGCTCCCAACAGGCCTGATCACATCATACTTATAACATTGGGCCCGCTTAATCGGGAAGTGAAGATCTGGTCCTCAGCGAGTGAAGAAGGCTGGCTACTTCCCAGTGATGCTGAGTCATGGAAATGTACCCGGACCTTAGAGTTAAAGGGCTCTGCTCAACCTCGAGTTGAGGATGCATTCTTTAATCAAGTCATAGCATTGTCACAAGCTGGCCTTCTTTTACTTGCAAATGCTAAGAAGAATGCTATATATGCTGTGCACTTAGACCTTGGTGGTGAGCCAGCATCTACATGCATGGATTACAGAGCAGAATTTACAATGCTTATTTTGAGCTTTACTGGAACAAGTATATCACCTCATGGTGAACAAATTTATTGTGTCCAAACACAAGCCATTCAACAGTATGCTTTGGACTTATCCAAGTGCTTACCTCCCCTATTGGAGAATTCAGGTTTAGAAAAGTTCTTTTGTTTCCAGGCATCTGATCTTGGAATTGAGATGGCCTGGGATTGCTGTGCAATATCATTAGAATCTTATATTACAGATGAAGCTCGGCAAGGTGATGGTGCCAGCATGTCAGAACCACTAGCCCAGCCTCATTCTGGAGAGGAAGACCACGATCGCTCTACAAAAGATGTATCTGGGTCAGCTACCGCCACAGCCGCATCACAACTACAAACACCAAATGCAAAGTTGAGAAAACAGAAACGGAAAAATATGCAAGCATCAGGTCAATCTTCCCCATCACCAGGTGTGCTCAACTCAATAGAGCCCTCTAATGAAGCAGGTGGGAGTTCAAGTCCCCCTCCGGAGAAGCTGCATTTCCTCAAATTATGGCCAGGCAGGATATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000932 GO:0000956 GO:0003006 GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0005737 GO:0005829 GO:0006139 GO:0006401 GO:0006402 GO:0006725 GO:0006807 GO:0007154 GO:0007165 GO:0007186 GO:0007275 GO:0008150 GO:0008152 GO:0009056 GO:0009057 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009892 GO:0009933 GO:0009965 GO:0009987 GO:0010014 GO:0010015 GO:0010016 GO:0010033 GO:0010071 GO:0010072 GO:0010154 GO:0010468 GO:0010605 GO:0010629 GO:0016070 GO:0016071 GO:0019222 GO:0019439 GO:0022414 GO:0022622 GO:0023052 GO:0031086 GO:0031087 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032870 GO:0032991 GO:0034641 GO:0034655 GO:0035770 GO:0036464 GO:0042221 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044248 GO:0044260 GO:0044265 GO:0044270 GO:0044422 GO:0044424 GO:0044428 GO:0044444 GO:0044446 GO:0044464 GO:0046483 GO:0046700 GO:0046983 GO:0048316 GO:0048364 GO:0048366 GO:0048367 GO:0048507 GO:0048508 GO:0048519 GO:0048532 GO:0048608 GO:0048731 GO:0048827 GO:0048856 GO:0050789 GO:0050794 GO:0050896 GO:0051716 GO:0060255 GO:0061458 GO:0065007 GO:0070013 GO:0070887 GO:0071310 GO:0071365 GO:0071495 GO:0071704 GO:0090304 GO:0090305 GO:0090421 GO:0097159 GO:0099402 GO:1901360 GO:1901361 GO:1901363 GO:1901575 GO:1905392 GO:1990904
KEGG Pathways
Metabolic & Signaling
ko03018 map03018
Pfam Domains
Protein Families
Ge1_WD40

Protein Analysis

449

Amino Acids

48.92

Weight (kDa)

5.17

Isoelectric Point (pI)

47.5

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000324)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G13290 AT3G13300 AT3G13300 AT3G13300
fragaria_vesca FvH4_3g41972 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g41980 FvH4_3g42780 FvH4_3g42790 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_3g42820 FvH4_4g01881 FvH4_7g10420
malus_domestica MD00G1013700.v1.1 MD03G1039800.v1.1 MD11G1041300.v1.1 MD11G1094900.v1.1
prunus_persica Prupe.6G032100_v2.0.a1
pyrus_communis pycom03g03070 pycom11g03500 pycom11g08470 pycom12g06730
rosa_chinensis RchiOBHm_Chr1g0328831 RchiOBHm_Chr4g0386471 RchiOBHm_Chr4g0386481 RchiOBHm_Chr4g0386551 RchiOBHm_Chr4g0386701 RchiOBHm_Chr4g0386801 RchiOBHm_Chr4g0386811 RchiOBHm_Chr4g0386821 RchiOBHm_Chr4g0386921 RchiOBHm_Chr4g0386931 RchiOBHm_Chr4g0386941 RchiOBHm_Chr4g0387211 RchiOBHm_Chr4g0389101 RchiOBHm_Chr4g0389111 RchiOBHm_Chr4g0389201 RchiOBHm_Chr4g0389211 RchiOBHm_Chr4g0389321 RchiOBHm_Chr4g0389331 RchiOBHm_Chr4g0389341 RchiOBHm_Chr4g0389411 RchiOBHm_Chr5g0075171
rosa_laevigata RLG00000009985 RLG00000009990 RLG00000009996 RLG00000009998 RLG00000010136 RLG00000010140 RLG00000036537
rosa_multiflora Rmu_co8461959.1_g000001 Rmu_sc0000013.1_g000017 Rmu_sc0000013.1_g000024 Rmu_sc0001015.1_g000001 Rmu_sc0001395.1_g000004 Rmu_sc0001942.1_g000022 Rmu_sc0002498.1_g000018 Rmu_sc0002498.1_g000020 Rmu_sc0002557.1_g000005 Rmu_sc0002604.1_g000010 Rmu_sc0002604.1_g000011 Rmu_sc0004750.1_g000003 Rmu_sc0006571.1_g000001 Rmu_sc0006571.1_g000014 Rmu_sc0006571.1_g000018 Rmu_sc0008050.1_g000016 Rmu_sc0008066.1_g000009 Rmu_sc0008380.1_g000006 Rmu_sc0008380.1_g000010 Rmu_sc0008380.1_g000012 Rmu_sc0010272.1_g000021 Rmu_sc0010693.1_g000010 Rmu_sc0010693.1_g000012 Rmu_sc0010693.1_g000014 Rmu_sc0010693.1_g000015 Rmu_sc0031790.1_g000003 Rmu_sc0040539.1_g000001 Rmu_ssc0000211.1_g000001 Rmu_ssc0000211.1_g000011 Rmu_ssc0000211.1_g000013
rosa_roxburghii Rroxscaffold_1G00006420 Rroxscaffold_1G00006430 Rroxscaffold_5G00334020 Rroxscaffold_5G00334050 Rroxscaffold_5G00335420
rosa_rugosa Rorug03G0307600 Rorug03G0308600 Rorug03G0322400 Rorug05G0437200 Rorug05G0437200 Rorug05G0437200
rosa_samantha Rh1BG075700 Rh4BG010000 Rh4BG010100 Rh4BG010200 Rh4BG020000 Rh4BG020400 Rh4BG172100 Rh4CG015300 Rh4CG016300 Rh5AG494100 Rh5AG494200 Rh5BG515500 Rh5CG539300 Rh5DG528200
rosa_wichuraiana Rw4G000930 Rw4G001980 Rw4G001990 Rw4G011950 Rw5G045850

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 530
AarI CACCTGC 1 cut(s) 1274
Acc36I ACCTGC 1 cut(s) 1274
AccB1I GGYRCC 1 cut(s) 1064
AccI GTMKAC 1 cut(s) 485
AccIII TCCGGA 1 cut(s) 1306
AciI CCGC 3 cut(s) 542, 1152, 1161
AcoI YGGCCR 1 cut(s) 1334
AcsI RAATTY 4 cut(s) 72, 809, 867, 943
AcuI CTGAAG 1 cut(s) 99
AdeI CACNNNGTG 1 cut(s) 1250
AfaI GTAC 1 cut(s) 625
AfiI CCNNNNNNNGG 4 cut(s) 92, 464, 1100, 1247
AgsI TTSAA 4 cut(s) 137, 302, 896, 1296
AjnI CCWGG 4 cut(s) 972, 1001, 1246, 1336
AluBI AGCT 8 cut(s) 158, 307, 500, 707, 831, 1049, 1148, 1315
AluI AGCT 8 cut(s) 158, 307, 500, 707, 831, 1049, 1148, 1315
Alw21I GWGCWC 2 cut(s) 759, 1257
Alw26I GTCTC 1 cut(s) 448
Alw44I GTGCAC 1 cut(s) 755
Ama87I CYCGRG 1 cut(s) 660
Aor13HI TCCGGA 1 cut(s) 1306
AoxI GGCC 6 cut(s) 466, 509, 538, 709, 999, 1334
ApaI GGGCCC 1 cut(s) 542
ApaLI GTGCAC 1 cut(s) 755
ApeKI GCWGC 1 cut(s) 1315
ApoI RAATTY 4 cut(s) 72, 809, 867, 943
Asp700I GAANNNNTTC 1 cut(s) 159
AspS9I GGNCC 6 cut(s) 83, 319, 538, 539, 567, 630
AsuC2I CCSGG 2 cut(s) 385, 628
AsuHPI GGTGA 9 cut(s) 17, 158, 272, 361, 785, 843, 872, 1070, 1236
AvaI CYCGRG 1 cut(s) 660
AvaII GGWCC 4 cut(s) 83, 319, 567, 630
BaeGI GKGCMC 2 cut(s) 542, 759
BalI TGGCCA 1 cut(s) 1336
BanI GGYRCC 1 cut(s) 1064
BanII GRGCYC 3 cut(s) 542, 650, 1272
BarI GAAGNNNNNNTAC 2 cut(s) 576, 608
BauI CACGAG 1 cut(s) 168
BbsI GAAGAC 1 cut(s) 1116
Bbv12I GWGCWC 2 cut(s) 759, 1257
BbvCI CCTCAGC 1 cut(s) 571
BbvI GCAGC 1 cut(s) 1302
BccI CCATC 8 cut(s) 48, 308, 335, 401, 458, 991, 1055, 1249
BciT130I CCWGG 4 cut(s) 974, 1003, 1248, 1338
BclI TGATCA 1 cut(s) 514
BcnI CCSGG 2 cut(s) 385, 628
BcoDI GTCTC 1 cut(s) 448
BfaI CTAG 2 cut(s) 36, 1085
BfuAI ACCTGC 1 cut(s) 1274
BglII AGATCT 1 cut(s) 561
BisI GCNGC 2 cut(s) 1161, 1316
BlsI GCNGC 2 cut(s) 1162, 1317
Bme1390I CCNGG 6 cut(s) 385, 628, 974, 1003, 1248, 1338
Bme18I GGWCC 4 cut(s) 83, 319, 567, 630
BmeT110I CYCGRG 1 cut(s) 660
BmgT120I GGNCC 6 cut(s) 83, 319, 538, 539, 567, 630
BmiI GGNNCC 3 cut(s) 320, 540, 1066
BmrFI CCNGG 6 cut(s) 385, 628, 974, 1003, 1248, 1338
BmrI ACTGGG 1 cut(s) 594
BmsI GCATC 7 cut(s) 229, 595, 661, 791, 986, 1172, 1232
BmuI ACTGGG 1 cut(s) 594
BpiI GAAGAC 1 cut(s) 1116
BpmI CTGGAG 1 cut(s) 1122
Bpu10I CCTNAGC 1 cut(s) 571
BpuMI CCSGG 2 cut(s) 385, 628
BsaI GGTCTC 1 cut(s) 448
BsaJI CCNNGG 3 cut(s) 15, 766, 1002
BsaWI WCCGGW 1 cut(s) 1306
BsaXI ACNNNNNCTCC 2 cut(s) 1282, 1312
Bsc4I CCNNNNNNNGG 4 cut(s) 92, 464, 1100, 1247
Bse1I ACTGG 2 cut(s) 600, 841
BseAI TCCGGA 1 cut(s) 1306
BseBI CCWGG 4 cut(s) 974, 1003, 1248, 1338
BseDI CCNNGG 3 cut(s) 15, 766, 1002
BseGI GGATG 5 cut(s) 59, 163, 381, 412, 676
BseLI CCNNNNNNNGG 4 cut(s) 92, 464, 1100, 1247
BseMII CTCAG 4 cut(s) 267, 443, 585, 600
BseNI ACTGG 2 cut(s) 600, 841
BseSI GKGCMC 2 cut(s) 542, 759
BseXI GCAGC 1 cut(s) 1302
BseYI CCCAGC 1 cut(s) 1089
Bsh1285I CGRYCG 1 cut(s) 1120
BshFI GGCC 6 cut(s) 468, 511, 540, 711, 1001, 1336
BshNI GGYRCC 1 cut(s) 1064
BsiEI CGRYCG 1 cut(s) 1120
BsiHKAI GWGCWC 2 cut(s) 759, 1257
BsiHKCI CYCGRG 1 cut(s) 660
BsiSI CCGG 3 cut(s) 385, 628, 1307
BslFI GGGAC 2 cut(s) 251, 1284
BslI CCNNNNNNNGG 4 cut(s) 92, 464, 1100, 1247
BsmAI GTCTC 1 cut(s) 448
BsmFI GGGAC 2 cut(s) 251, 1284
BsmI GAATGC 2 cut(s) 674, 745
BsnI GGCC 6 cut(s) 468, 511, 540, 711, 1001, 1336
Bso31I GGTCTC 1 cut(s) 448
BsoBI CYCGRG 1 cut(s) 660
Bsp120I GGGCCC 1 cut(s) 538
Bsp1286I GDGCHC 5 cut(s) 542, 650, 759, 1257, 1272
Bsp13I TCCGGA 1 cut(s) 1306
Bsp143I GATC 5 cut(s) 424, 514, 561, 982, 1117
BspACI CCGC 3 cut(s) 542, 1152, 1161
BspANI GGCC 6 cut(s) 468, 511, 540, 711, 1001, 1336
BspCNI CTCAG 4 cut(s) 268, 444, 584, 601
BspEI TCCGGA 1 cut(s) 1306
BspLI GGNNCC 3 cut(s) 320, 540, 1066
BspMI ACCTGC 1 cut(s) 1274
BspT107I GGYRCC 1 cut(s) 1064
BspTNI GGTCTC 1 cut(s) 448
BsrI ACTGG 2 cut(s) 600, 841
BssECI CCNNGG 3 cut(s) 15, 766, 1002
BssMI GATC 5 cut(s) 424, 514, 561, 982, 1117
BssSI CACGAG 1 cut(s) 168
BssT1I CCWWGG 1 cut(s) 766
Bst2BI CACGAG 1 cut(s) 168
Bst2UI CCWGG 4 cut(s) 974, 1003, 1248, 1338
Bst4CI ACNGT 1 cut(s) 900
BstC8I GCNNGC 6 cut(s) 542, 590, 709, 780, 1069, 1221
BstDEI CTNAG 7 cut(s) 276, 452, 571, 609, 634, 732, 760
BstF5I GGATG 5 cut(s) 59, 163, 381, 412, 676
BstKTI GATC 5 cut(s) 427, 517, 564, 985, 1120
BstMAI GTCTC 1 cut(s) 448
BstMBI GATC 5 cut(s) 424, 514, 561, 982, 1117
BstMCI CGRYCG 1 cut(s) 1120
BstMWI GCNNNNNNNGC 3 cut(s) 11, 749, 1160
BstNI CCWGG 4 cut(s) 974, 1003, 1248, 1338
BstNSI RCATGY 2 cut(s) 792, 1075
BstSCI CCNGG 6 cut(s) 383, 626, 972, 1001, 1246, 1336
BstSLI GKGCMC 2 cut(s) 542, 759
BstV1I GCAGC 1 cut(s) 1302
BstV2I GAAGAC 1 cut(s) 1116
BstX2I RGATCY 1 cut(s) 561
BstXI CCANNNNNNTGG 2 cut(s) 329, 388
BstYI RGATCY 1 cut(s) 561
BsuRI GGCC 6 cut(s) 468, 511, 540, 711, 1001, 1336
BtsCI GGATG 5 cut(s) 59, 163, 381, 412, 676
BtsIMutI CAGTG 1 cut(s) 607
BveI ACCTGC 1 cut(s) 1274
Cac8I GCNNGC 6 cut(s) 542, 590, 709, 780, 1069, 1221
Cfr13I GGNCC 6 cut(s) 83, 319, 538, 539, 567, 630
CsiI ACCWGGT 1 cut(s) 1246
Csp6I GTAC 1 cut(s) 624
CviAII CATG 6 cut(s) 338, 615, 789, 793, 857, 1072
CviQI GTAC 1 cut(s) 624
DdeI CTNAG 7 cut(s) 276, 452, 571, 609, 634, 732, 760
DpnI GATC 5 cut(s) 426, 516, 563, 984, 1119
DpnII GATC 5 cut(s) 424, 514, 561, 982, 1117
DraIII CACNNNGTG 1 cut(s) 1250
EaeI YGGCCR 1 cut(s) 1334
Eco130I CCWWGG 1 cut(s) 766
Eco147I AGGCCT 1 cut(s) 511
Eco24I GRGCYC 3 cut(s) 542, 650, 1272
Eco31I GGTCTC 1 cut(s) 448
Eco47I GGWCC 4 cut(s) 83, 319, 567, 630
Eco57I CTGAAG 1 cut(s) 99
Eco88I CYCGRG 1 cut(s) 660
EcoRI GAATTC 1 cut(s) 943
EcoRII CCWGG 4 cut(s) 972, 1001, 1246, 1336
EcoT14I CCWWGG 1 cut(s) 766
EcoT22I ATGCAT 2 cut(s) 676, 794
EcoT38I GRGCYC 3 cut(s) 542, 650, 1272
ErhI CCWWGG 1 cut(s) 766
FaeI CATG 6 cut(s) 341, 618, 792, 796, 860, 1075
FalI AAGNNNNNCTT 2 cut(s) 696, 728
FaqI GGGAC 2 cut(s) 251, 1284
FatI CATG 6 cut(s) 337, 614, 788, 792, 856, 1071
FauI CCCGC 1 cut(s) 549
FbaI TGATCA 1 cut(s) 514
FblI GTMKAC 1 cut(s) 485
Fnu4HI GCNGC 2 cut(s) 1161, 1316
FokI GGATG 5 cut(s) 66, 150, 388, 419, 683
FriOI GRGCYC 3 cut(s) 542, 650, 1272
Fsp4HI GCNGC 2 cut(s) 1161, 1316
FspBI CTAG 2 cut(s) 36, 1085
GluI GCNGC 2 cut(s) 1161, 1316
GsaI CCCAGC 1 cut(s) 1093
GsuI CTGGAG 1 cut(s) 1122
HaeIII GGCC 6 cut(s) 468, 511, 540, 711, 1001, 1336
HapII CCGG 3 cut(s) 385, 628, 1307
Hin1II CATG 6 cut(s) 341, 618, 792, 796, 860, 1075
HinfI GANTC 2 cut(s) 611, 1028
HpaII CCGG 3 cut(s) 385, 628, 1307
HphI GGTGA 9 cut(s) 17, 158, 272, 361, 785, 843, 872, 1070, 1236
Hpy166II GTNNAC 5 cut(s) 25, 335, 486, 757, 863
Hpy188I TCNGA 3 cut(s) 79, 982, 1078
Hpy188III TCNNGA 4 cut(s) 86, 551, 1101, 1307
Hpy8I GTNNAC 5 cut(s) 25, 335, 486, 757, 863
HpyAV CCTTC 6 cut(s) 74, 86, 279, 479, 578, 722
HpyCH4III ACNGT 1 cut(s) 900
HpyCH4IV ACGT 1 cut(s) 21
HpyCH4V TGCA 9 cut(s) 254, 674, 725, 757, 792, 1016, 1187, 1219, 1318
HpyF10VI GCNNNNNNNGC 3 cut(s) 11, 749, 1160
HpyF3I CTNAG 7 cut(s) 276, 452, 571, 609, 634, 732, 760
HpySE526I ACGT 1 cut(s) 21
Hsp92II CATG 6 cut(s) 341, 618, 792, 796, 860, 1075
Kpn2I TCCGGA 1 cut(s) 1306
Ksp22I TGATCA 1 cut(s) 514
Kzo9I GATC 5 cut(s) 424, 514, 561, 982, 1117
LmnI GCTCC 1 cut(s) 505
Lsp1109I GCAGC 1 cut(s) 1302
LweI GCATC 7 cut(s) 229, 595, 661, 791, 986, 1172, 1232
MabI ACCWGGT 1 cut(s) 1246
MaeI CTAG 2 cut(s) 36, 1085
MaeII ACGT 1 cut(s) 21
MaeIII GTNAC 3 cut(s) 349, 493, 699
MalI GATC 5 cut(s) 426, 516, 563, 984, 1119
MboI GATC 5 cut(s) 424, 514, 561, 982, 1117
MboII GAAGA 6 cut(s) 434, 571, 593, 748, 1121, 1227
MflI RGATCY 1 cut(s) 561
MhlI GDGCHC 5 cut(s) 542, 650, 759, 1257, 1272
MlsI TGGCCA 1 cut(s) 1336
MluCI AATT 8 cut(s) 72, 234, 323, 809, 867, 943, 990, 1328
MluNI TGGCCA 1 cut(s) 1336
MlyI GAGTC 1 cut(s) 620
Mox20I TGGCCA 1 cut(s) 1336
Mph1103I ATGCAT 2 cut(s) 676, 794
MroI TCCGGA 1 cut(s) 1306
MroXI GAANNNNTTC 1 cut(s) 159
MscI TGGCCA 1 cut(s) 1336
MseI TTAA 4 cut(s) 288, 546, 641, 681
MslI CAYNNNNRTG 2 cut(s) 619, 787
Msp20I TGGCCA 1 cut(s) 1336
MspI CCGG 3 cut(s) 385, 628, 1307
MspR9I CCNGG 6 cut(s) 385, 628, 974, 1003, 1248, 1338
Mva1269I GAATGC 2 cut(s) 674, 745
MvaI CCWGG 4 cut(s) 974, 1003, 1248, 1338
MwoI GCNNNNNNNGC 3 cut(s) 11, 749, 1160
NciI CCSGG 2 cut(s) 385, 628
NdeII GATC 5 cut(s) 424, 514, 561, 982, 1117
NlaIII CATG 6 cut(s) 341, 618, 792, 796, 860, 1075
NlaIV GGNNCC 3 cut(s) 320, 540, 1066
NmeAIII GCCGAG 2 cut(s) 40, 1030
NmuCI GTSAC 3 cut(s) 349, 493, 699
NsiI ATGCAT 2 cut(s) 676, 794
NspI RCATGY 2 cut(s) 792, 1075
PaeR7I CTCGAG 1 cut(s) 660
PaqCI CACCTGC 1 cut(s) 1274
PceI AGGCCT 1 cut(s) 511
PctI GAATGC 2 cut(s) 674, 745
PdmI GAANNNNTTC 1 cut(s) 159
PfeI GAWTC 1 cut(s) 1028
PkrI GCNGC 2 cut(s) 1162, 1317
Ple19I CGATCG 1 cut(s) 1120
PleI GAGTC 1 cut(s) 619
PpsI GAGTC 1 cut(s) 619
PsiI TTATAA 1 cut(s) 530
Psp6I CCWGG 4 cut(s) 972, 1001, 1246, 1336
PspFI CCCAGC 1 cut(s) 1089
PspGI CCWGG 4 cut(s) 972, 1001, 1246, 1336
PspN4I GGNNCC 3 cut(s) 320, 540, 1066
PspOMI GGGCCC 1 cut(s) 538
PspPI GGNCC 6 cut(s) 83, 319, 538, 539, 567, 630
PspXI VCTCGAGB 1 cut(s) 660
PsuI RGATCY 1 cut(s) 561
PvuI CGATCG 1 cut(s) 1120
RsaI GTAC 1 cut(s) 625
RsaNI GTAC 1 cut(s) 624
RseI CAYNNNNRTG 2 cut(s) 619, 787
SaqAI TTAA 4 cut(s) 288, 546, 641, 681
SatI GCNGC 2 cut(s) 1161, 1316
Sau3AI GATC 5 cut(s) 424, 514, 561, 982, 1117
Sau96I GGNCC 6 cut(s) 83, 319, 538, 539, 567, 630
SchI GAGTC 1 cut(s) 620
ScrFI CCNGG 6 cut(s) 385, 628, 974, 1003, 1248, 1338
SduI GDGCHC 5 cut(s) 542, 650, 759, 1257, 1272
SexAI ACCWGGT 1 cut(s) 1246
SfaNI GCATC 7 cut(s) 229, 595, 661, 791, 986, 1172, 1232
Sfr274I CTCGAG 1 cut(s) 660
SinI GGWCC 4 cut(s) 83, 319, 567, 630
SlaI CTCGAG 1 cut(s) 660
SmiMI CAYNNNNRTG 2 cut(s) 619, 787
SmlI CTYRAG 1 cut(s) 660
SmoI CTYRAG 1 cut(s) 660
Sse9I AATT 8 cut(s) 72, 234, 323, 809, 867, 943, 990, 1328
SseBI AGGCCT 1 cut(s) 511
SsiI CCGC 3 cut(s) 542, 1152, 1161
SspMI CTAG 2 cut(s) 36, 1085
StuI AGGCCT 1 cut(s) 511
StyD4I CCNGG 6 cut(s) 383, 626, 972, 1001, 1246, 1336
StyI CCWWGG 1 cut(s) 766
TaaI ACNGT 1 cut(s) 900
TaiI ACGT 1 cut(s) 24
TaqI TCGA 1 cut(s) 661
TasI AATT 8 cut(s) 72, 234, 323, 809, 867, 943, 990, 1328
TauI GCSGC 1 cut(s) 1163
TfiI GAWTC 1 cut(s) 1028
Tru1I TTAA 4 cut(s) 288, 546, 641, 681
Tru9I TTAA 4 cut(s) 288, 546, 641, 681
TscAI CASTG 1 cut(s) 607
TseFI GTSAC 3 cut(s) 349, 493, 699
TseI GCWGC 1 cut(s) 1315
Tsp45I GTSAC 3 cut(s) 349, 493, 699
TspDTI ATGAA 4 cut(s) 105, 152, 1059, 1293
TspGWI ACGGA 1 cut(s) 1222
TspRI CASTG 1 cut(s) 607
VneI GTGCAC 1 cut(s) 755
VpaK11BI GGWCC 4 cut(s) 83, 319, 567, 630
XapI RAATTY 4 cut(s) 72, 809, 867, 943
XceI RCATGY 2 cut(s) 792, 1075
XcmI CCANNNNNNNNNTGG 2 cut(s) 174, 1097
XhoI CTCGAG 1 cut(s) 660
XmiI GTMKAC 1 cut(s) 485
XmnI GAANNNNTTC 1 cut(s) 159
XspI CTAG 2 cut(s) 36, 1085
Zsp2I ATGCAT 2 cut(s) 676, 794
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.