FvH4_3g43490

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000117
Physical Location & Seq
Forward (+)
36228943 .. 36233750
4808 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g43490.t3

Sequence Viewer

Length: 1554 bp
ATGGCAATGCAAAGATTTTTGTTTCTAGGCATAGTGCTTCTACTTGTTGCAGGCTTTAGATTGACAAACAGTGAAGCTCTTTCACCCAGTAGGACTCCTATCTATGACACTGCTTTCCTCAACAGGACTAGTTTCCCTGAAGGTTTCGTATTTGGGACAGCTTCAGCGGCTTATCAGTATGAAGGTGCTGCTAAAGAAGGTGGTAGAGGACCAAGCATATGGGATACCTACACCCACGAACATCCAGAAAGGATCACGGATGGAAGCAATGGAGATGTAGCTAATGATCAATATCACCGCTATAAGGAAGATGTGAGGATTATGAAGGATATGAATCTGGATGCTTATAGGTTCTCTATCTCATGGTCAAGACTGTTACCAAATGGAAAGCTAAGTGGGGGAGTGAACAAAGAAGGAGTCAAGTACTACAACAATCTCATCAATGAACTCCTAAGCAAAGGTCTACAGCCATATGTGACCCTCTTTCACTGGGATCTTCCCCAAACTTTAGAAGACGAATATGGCGGTTTCTTAAGCCCTAACATTGTCAACCATTTTCGGGACTTTTCGGAACTGTGTTTCAAAGAATTTGGTGATCGGGTGAAGTACTGGATCACGTTGAATGAGCCATGGACATACAGCAATGGTGGTTATGCCCTCGGTTCGTTGGCACCGGGAAGGTGTTCTGCTTGGCAGCAGCTAAACTGCACGGGAGGGGATTCGAGTACTGAACCCTATTTGGTGGCACACAACCTACTCCTTTCTCATGCAGCTGCTGTAAAGTTGTACAGGCAGAAATATCAGGCATATCAGAAGGGAGTTATAGGAATTACCATAGTGTCTCACTGGTTCATTCCAATTTCAGACGCAACGCACCACAAAAATGCCGCCTTACGAACTCTGGATTTTATGTTTGGATGGTTCATGGATCCTTTGACAAACGGAGACTATCCACACAGCATGCGATCTCTCGTCGGAAACCGATTACCGAAATTCACAAAAGAACAATCCAAGTTGCTAATCGGATCATTTGATTTTCTTGGACTGAATTACTATACTACTTACTATGCAAGTTATACACCTCAGAACAATTCTTTGAATGCAAGCTACGTGACAGACGCTCGTTCTACTCAATCATTTGCGCTCAATGGCGTCCCGATTGGTCCACAGGCTGCTTCATCATGGCTATATGTTTATCCAAAAGGACTTAGAGACCTTTTACTCTACACAAAGACGAAGTATAATGATCCTCTTATTTACATTACTGAGAATGGCATCGATGAGTTCAATGATCCGAAATTATCACTTGAGGAAGCCTTGTTTGACAATCAGAGAGTTGACTATTACTTTCGCCATCTCTATTACCTTCAAAAAGCAATCGAGGATGGTGTGAAAGTGAAGGGCTACTTTGCATGGTCATTGCTAGACAACTTCGAGTGGGCTTCGGGTTACACAGTGCGGTTCGGTATCAACTACGTGGATTACAAGAACGGAAACAAAAGGCACCCAAAGCTCTCAGCACACTGGTTCAAAAACTTCCTCAAGAATTACTGA

Protein Analysis

518

Amino Acids

59.26

Weight (kDa)

7.68

Isoelectric Point (pI)

24.36

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 43 - 460 6e-134 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 670, 1503
AccI GTMKAC 1 cut(s) 463
AciI CCGC 5 cut(s) 167, 298, 525, 888, 1459
AclWI GGATC 8 cut(s) 260, 501, 620, 923, 936, 1033, 1241, 1286
AcsI RAATTY 2 cut(s) 587, 992
AcuI CTGAAG 2 cut(s) 147, 159
AcyI GRCGYC 1 cut(s) 1152
AfaI GTAC 4 cut(s) 425, 608, 727, 788
AfiI CCNNNNNNNGG 2 cut(s) 304, 559
AflII CTTAAG 1 cut(s) 532
AgsI TTSAA 6 cut(s) 583, 622, 1099, 1288, 1370, 1531
AhlI ACTAGT 1 cut(s) 128
AluBI AGCT 8 cut(s) 77, 161, 281, 391, 700, 773, 1107, 1513
AluI AGCT 8 cut(s) 77, 161, 281, 391, 700, 773, 1107, 1513
Alw26I GTCTC 3 cut(s) 846, 939, 1206
AlwI GGATC 8 cut(s) 260, 501, 620, 923, 936, 1033, 1241, 1286
AlwNI CAGNNNCTG 1 cut(s) 776
ApeKI GCWGC 6 cut(s) 188, 694, 697, 770, 773, 1172
ApoI RAATTY 2 cut(s) 587, 992
ArsI GACNNNNNNTTYG 2 cut(s) 402, 434
Asp700I GAANNNNTTC 1 cut(s) 682
AspLEI GCGC 1 cut(s) 1144
AspS9I GGNCC 2 cut(s) 209, 1163
AsuC2I CCSGG 1 cut(s) 675
AsuHPI GGTGA 4 cut(s) 75, 287, 605, 613
AvaII GGWCC 2 cut(s) 209, 1163
BamHI GGATCC 1 cut(s) 928
BanI GGYRCC 2 cut(s) 670, 1503
BbsI GAAGAC 1 cut(s) 519
BbvI GCAGC 6 cut(s) 175, 706, 709, 760, 782, 1159
BccI CCATC 4 cut(s) 254, 912, 1362, 1379
BciVI GTATCC 1 cut(s) 217
BclI TGATCA 1 cut(s) 286
BcnI CCSGG 1 cut(s) 675
BcoDI GTCTC 3 cut(s) 846, 939, 1206
BcuI ACTAGT 1 cut(s) 128
BfaI CTAG 3 cut(s) 26, 129, 1424
BfmI CTRYAG 1 cut(s) 464
BfrI CTTAAG 1 cut(s) 532
BfuI GTATCC 1 cut(s) 217
BisI GCNGC 8 cut(s) 168, 189, 695, 698, 771, 774, 888, 1173
BlsI GCNGC 8 cut(s) 169, 190, 696, 699, 772, 775, 889, 1174
BmcAI AGTACT 3 cut(s) 425, 608, 727
Bme1390I CCNGG 1 cut(s) 675
Bme18I GGWCC 2 cut(s) 209, 1163
BmgT120I GGNCC 2 cut(s) 209, 1163
BmiI GGNNCC 3 cut(s) 672, 930, 1505
BmrFI CCNGG 1 cut(s) 675
BmrI ACTGGG 2 cut(s) 81, 499
BmsI GCATC 2 cut(s) 331, 1284
BmuI ACTGGG 2 cut(s) 81, 499
BpiI GAAGAC 1 cut(s) 519
Bpu10I CCTNAGC 1 cut(s) 452
BpuEI CTTGAG 2 cut(s) 1328, 1526
BpuMI CCSGG 1 cut(s) 675
Bsa29I ATCGAT 1 cut(s) 1278
BsaAI YACGTR 2 cut(s) 1111, 1477
BsaBI GATNNNNATC 2 cut(s) 291, 333
BsaHI GRCGYC 1 cut(s) 1152
BsaI GGTCTC 1 cut(s) 1206
BsaJI CCNNGG 2 cut(s) 629, 658
Bsc4I CCNNNNNNNGG 2 cut(s) 304, 559
Bse1I ACTGG 5 cut(s) 87, 494, 614, 851, 1529
Bse3DI GCAATG 4 cut(s) 12, 274, 649, 1418
Bse8I GATNNNNATC 2 cut(s) 291, 333
BseCI ATCGAT 1 cut(s) 1278
BseDI CCNNGG 2 cut(s) 629, 658
BseGI GGATG 5 cut(s) 241, 265, 346, 923, 1390
BseJI GATNNNNATC 2 cut(s) 291, 333
BseLI CCNNNNNNNGG 2 cut(s) 304, 559
BseMI GCAATG 4 cut(s) 12, 274, 649, 1418
BseMII CTCAG 3 cut(s) 1097, 1257, 1530
BseNI ACTGG 5 cut(s) 87, 494, 614, 851, 1529
BseXI GCAGC 6 cut(s) 175, 706, 709, 760, 782, 1159
BsgI GTGCAG 1 cut(s) 691
BshNI GGYRCC 2 cut(s) 670, 1503
BshVI ATCGAT 1 cut(s) 1278
BsiSI CCGG 1 cut(s) 674
BslFI GGGAC 3 cut(s) 169, 575, 1139
BslI CCNNNNNNNGG 2 cut(s) 304, 559
BsmAI GTCTC 3 cut(s) 846, 939, 1206
BsmFI GGGAC 3 cut(s) 169, 575, 1139
BsmI GAATGC 1 cut(s) 1105
Bso31I GGTCTC 1 cut(s) 1206
Bsp1407I TGTACA 1 cut(s) 786
Bsp19I CCATGG 1 cut(s) 629
BspACI CCGC 5 cut(s) 167, 298, 525, 888, 1459
BspCNI CTCAG 3 cut(s) 1096, 1258, 1529
BspDI ATCGAT 1 cut(s) 1278
BspLI GGNNCC 3 cut(s) 672, 930, 1505
BspPI GGATC 8 cut(s) 260, 501, 620, 923, 936, 1033, 1241, 1286
BspT107I GGYRCC 2 cut(s) 670, 1503
BspTI CTTAAG 1 cut(s) 532
BspTNI GGTCTC 1 cut(s) 1206
BsrDI GCAATG 4 cut(s) 12, 274, 649, 1418
BsrGI TGTACA 1 cut(s) 786
BsrI ACTGG 5 cut(s) 87, 494, 614, 851, 1529
BssECI CCNNGG 2 cut(s) 629, 658
BssNI GRCGYC 1 cut(s) 1152
BssT1I CCWWGG 1 cut(s) 629
Bst4CI ACNGT 4 cut(s) 71, 375, 576, 1456
BstACI GRCGYC 1 cut(s) 1152
BstAFI CTTAAG 1 cut(s) 532
BstAUI TGTACA 1 cut(s) 786
BstBAI YACGTR 2 cut(s) 1111, 1477
BstC8I GCNNGC 3 cut(s) 52, 962, 1105
BstDEI CTNAG 6 cut(s) 392, 452, 1083, 1208, 1266, 1516
BstDSI CCRYGG 1 cut(s) 629
BstF5I GGATG 5 cut(s) 241, 265, 346, 923, 1390
BstHHI GCGC 1 cut(s) 1144
BstMAI GTCTC 3 cut(s) 846, 939, 1206
BstMWI GCNNNNNNNGC 2 cut(s) 167, 1510
BstNSI RCATGY 1 cut(s) 964
BstSCI CCNGG 1 cut(s) 673
BstSFI CTRYAG 1 cut(s) 464
BstV1I GCAGC 6 cut(s) 175, 706, 709, 760, 782, 1159
BstV2I GAAGAC 1 cut(s) 519
BstX2I RGATCY 2 cut(s) 493, 928
BstXI CCANNNNNNTGG 1 cut(s) 219
BstYI RGATCY 2 cut(s) 493, 928
Bsu15I ATCGAT 1 cut(s) 1278
BsuI GTATCC 1 cut(s) 217
BsuTUI ATCGAT 1 cut(s) 1278
BtgI CCRYGG 1 cut(s) 629
BtsCI GGATG 5 cut(s) 241, 265, 346, 923, 1390
BtsI GCAGTG 1 cut(s) 108
BtsIMutI CAGTG 6 cut(s) 76, 108, 487, 844, 1461, 1522
Cac8I GCNNGC 3 cut(s) 52, 962, 1105
CaiI CAGNNNCTG 1 cut(s) 776
CfoI GCGC 1 cut(s) 1144
Cfr13I GGNCC 2 cut(s) 209, 1163
ClaI ATCGAT 1 cut(s) 1278
CseI GACGC 3 cut(s) 875, 1127, 1141
Csp6I GTAC 4 cut(s) 424, 607, 726, 787
CviAII CATG 7 cut(s) 363, 630, 767, 925, 961, 1182, 1413
CviQI GTAC 4 cut(s) 424, 607, 726, 787
DdeI CTNAG 6 cut(s) 392, 452, 1083, 1208, 1266, 1516
Eco130I CCWWGG 1 cut(s) 629
Eco31I GGTCTC 1 cut(s) 1206
Eco47I GGWCC 2 cut(s) 209, 1163
Eco57I CTGAAG 2 cut(s) 147, 159
EcoT14I CCWWGG 1 cut(s) 629
ErhI CCWWGG 1 cut(s) 629
FaeI CATG 7 cut(s) 366, 633, 770, 928, 964, 1185, 1416
FalI AAGNNNNNCTT 2 cut(s) 1391, 1423
FaqI GGGAC 3 cut(s) 169, 575, 1139
FatI CATG 7 cut(s) 362, 629, 766, 924, 960, 1181, 1412
FauNDI CATATG 2 cut(s) 218, 472
FbaI TGATCA 1 cut(s) 286
FblI GTMKAC 1 cut(s) 463
Fnu4HI GCNGC 8 cut(s) 168, 189, 695, 698, 771, 774, 888, 1173
FokI GGATG 5 cut(s) 228, 272, 353, 930, 1397
Fsp4HI GCNGC 8 cut(s) 168, 189, 695, 698, 771, 774, 888, 1173
FspBI CTAG 3 cut(s) 26, 129, 1424
GlaI GCGC 1 cut(s) 1143
GluI GCNGC 8 cut(s) 168, 189, 695, 698, 771, 774, 888, 1173
HapII CCGG 1 cut(s) 674
HgaI GACGC 3 cut(s) 875, 1127, 1141
HhaI GCGC 1 cut(s) 1144
Hin1I GRCGYC 1 cut(s) 1152
Hin1II CATG 7 cut(s) 366, 633, 770, 928, 964, 1185, 1416
Hin6I GCGC 1 cut(s) 1142
HinP1I GCGC 1 cut(s) 1142
HincII GTYRAC 2 cut(s) 550, 1339
HindII GTYRAC 2 cut(s) 550, 1339
HinfI GANTC 4 cut(s) 94, 334, 417, 719
HpaII CCGG 1 cut(s) 674
HphI GGTGA 4 cut(s) 75, 287, 605, 613
Hpy166II GTNNAC 5 cut(s) 406, 464, 550, 1166, 1339
Hpy188I TCNGA 8 cut(s) 571, 813, 865, 977, 1025, 1086, 1296, 1332
Hpy188III TCNNGA 7 cut(s) 245, 338, 369, 560, 902, 1156, 1543
Hpy8I GTNNAC 5 cut(s) 406, 464, 550, 1166, 1339
Hpy99I CGWCG 1 cut(s) 977
HpyAV CCTTC 9 cut(s) 134, 176, 191, 319, 407, 672, 808, 1376, 1393
HpyCH4III ACNGT 4 cut(s) 71, 375, 576, 1456
HpyCH4IV ACGT 3 cut(s) 617, 1110, 1476
HpyCH4V TGCA 7 cut(s) 10, 50, 708, 770, 1070, 1103, 1412
HpyF10VI GCNNNNNNNGC 2 cut(s) 167, 1510
HpyF3I CTNAG 6 cut(s) 392, 452, 1083, 1208, 1266, 1516
HpySE526I ACGT 3 cut(s) 617, 1110, 1476
Hsp92I GRCGYC 1 cut(s) 1152
Hsp92II CATG 7 cut(s) 366, 633, 770, 928, 964, 1185, 1416
HspAI GCGC 1 cut(s) 1142
Ksp22I TGATCA 1 cut(s) 286
Lsp1109I GCAGC 6 cut(s) 175, 706, 709, 760, 782, 1159
LweI GCATC 2 cut(s) 331, 1284
MaeI CTAG 3 cut(s) 26, 129, 1424
MaeII ACGT 3 cut(s) 617, 1110, 1476
MaeIII GTNAC 4 cut(s) 375, 475, 1111, 1448
MboII GAAGA 3 cut(s) 320, 488, 524
MflI RGATCY 2 cut(s) 493, 928
MluCI AATT 8 cut(s) 587, 828, 858, 992, 1048, 1090, 1298, 1546
MlyI GAGTC 2 cut(s) 88, 426
MmeI TCCRAC 1 cut(s) 955
MroXI GAANNNNTTC 1 cut(s) 682
MseI TTAA 1 cut(s) 533
MslI CAYNNNNRTG 1 cut(s) 882
MspA1I CMGCKG 2 cut(s) 167, 773
MspCI CTTAAG 1 cut(s) 532
MspI CCGG 1 cut(s) 674
MspR9I CCNGG 1 cut(s) 675
Mva1269I GAATGC 1 cut(s) 1105
MwoI GCNNNNNNNGC 2 cut(s) 167, 1510
NciI CCSGG 1 cut(s) 675
NcoI CCATGG 1 cut(s) 629
NdeI CATATG 2 cut(s) 218, 472
NlaIII CATG 7 cut(s) 366, 633, 770, 928, 964, 1185, 1416
NlaIV GGNNCC 3 cut(s) 672, 930, 1505
NmuCI GTSAC 2 cut(s) 475, 1111
NspI RCATGY 1 cut(s) 964
PaeI GCATGC 1 cut(s) 964
PctI GAATGC 1 cut(s) 1105
PdmI GAANNNNTTC 1 cut(s) 682
PfeI GAWTC 2 cut(s) 334, 719
PkrI GCNGC 8 cut(s) 169, 190, 696, 699, 772, 775, 889, 1174
PleI GAGTC 2 cut(s) 88, 425
PpsI GAGTC 2 cut(s) 88, 425
Ppu21I YACGTR 2 cut(s) 1111, 1477
PspN4I GGNNCC 3 cut(s) 672, 930, 1505
PspPI GGNCC 2 cut(s) 209, 1163
PstNI CAGNNNCTG 1 cut(s) 776
PsuI RGATCY 2 cut(s) 493, 928
PvuII CAGCTG 1 cut(s) 773
RsaI GTAC 4 cut(s) 425, 608, 727, 788
RsaNI GTAC 4 cut(s) 424, 607, 726, 787
RseI CAYNNNNRTG 1 cut(s) 882
SaqAI TTAA 1 cut(s) 533
SatI GCNGC 8 cut(s) 168, 189, 695, 698, 771, 774, 888, 1173
Sau96I GGNCC 2 cut(s) 209, 1163
ScaI AGTACT 3 cut(s) 425, 608, 727
SchI GAGTC 2 cut(s) 88, 426
ScrFI CCNGG 1 cut(s) 675
SfaNI GCATC 2 cut(s) 331, 1284
SfcI CTRYAG 1 cut(s) 464
SinI GGWCC 2 cut(s) 209, 1163
SmiMI CAYNNNNRTG 1 cut(s) 882
SmlI CTYRAG 3 cut(s) 532, 1307, 1541
SmoI CTYRAG 3 cut(s) 532, 1307, 1541
SpeI ACTAGT 1 cut(s) 128
SphI GCATGC 1 cut(s) 964
Sse9I AATT 8 cut(s) 587, 828, 858, 992, 1048, 1090, 1298, 1546
SsiI CCGC 5 cut(s) 167, 298, 525, 888, 1459
SspMI CTAG 3 cut(s) 26, 129, 1424
StyD4I CCNGG 1 cut(s) 673
StyI CCWWGG 1 cut(s) 629
TaaI ACNGT 4 cut(s) 71, 375, 576, 1456
TaiI ACGT 3 cut(s) 620, 1113, 1479
TaqI TCGA 4 cut(s) 722, 1278, 1380, 1434
TasI AATT 8 cut(s) 587, 828, 858, 992, 1048, 1090, 1298, 1546
TatI WGTACW 4 cut(s) 423, 606, 725, 786
TauI GCSGC 2 cut(s) 170, 890
TfiI GAWTC 2 cut(s) 334, 719
Tru1I TTAA 1 cut(s) 533
Tru9I TTAA 1 cut(s) 533
TscAI CASTG 6 cut(s) 76, 115, 494, 851, 1461, 1529
TseFI GTSAC 2 cut(s) 475, 1111
TseI GCWGC 6 cut(s) 188, 694, 697, 770, 773, 1172
Tsp45I GTSAC 2 cut(s) 475, 1111
TspDTI ATGAA 7 cut(s) 195, 338, 347, 459, 841, 913, 1167
TspGWI ACGGA 3 cut(s) 272, 957, 1506
TspRI CASTG 6 cut(s) 76, 115, 494, 851, 1461, 1529
Vha464I CTTAAG 1 cut(s) 532
VpaK11BI GGWCC 2 cut(s) 209, 1163
XapI RAATTY 2 cut(s) 587, 992
XceI RCATGY 1 cut(s) 964
XmiI GTMKAC 1 cut(s) 463
XmnI GAANNNNTTC 1 cut(s) 682
XspI CTAG 3 cut(s) 26, 129, 1424
ZrmI AGTACT 3 cut(s) 425, 608, 727
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.