Rh5DG546700

Belongs to the glycosyl hydrolase 1 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5D
Physical Location & Seq
Forward (+)
84030274 .. 84049618
19345 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5DG546700.1

Sequence Viewer

Length: 2226 bp
ATGGCACTTCAAGGCACTCTCATCTCTGCAATCATACTTGTTTTTAGCTGTGCAGTGGCAACTAGTATAGCTACCGCCCCAAGCCATTACGACGTTGCTTCCATCAACCGGAGCACCTTTCCGGCAGGTTTCATATTTGGGACAGCTTCTTCAGCTTACCAGTTCGAAGGTGCTGCAAAAGAAGATGGAAGAGGACCAAGCATATGGGACACATACACTCACAAAATTCCAGATAAGATAAAAGACGGCAGCAATGGAGATGTCGCTATTGATGCATATCACCGCTACAAGGAGGATGTTGGCATCATGAAAAATATGGGTTTTGATGCTTACAGATTCTCCATCTCGTGGTCTAGATTGTTACCTAATGGAACCCTAAGAGGGGGTGTGAATAAGGAAGGAATCAAATATTACAACAACCTCATAAACGAGCTTCTAGCCAATGGTCTAAAGCCCTTTGTCACACTCTTCCACTGGGATCTTCCCCAAGCTTTAGAAGATGAATACGGTGGCTTCTTAAGCCCTCAAATTGTAAACCATTTCCAAGACTACGCAGAGCTATGCTTCAAGGAATTTGGTGATAGAGTTAAGGACTGGATCACATTAAATGAGCCCTGGAGCTACGCCAATGGTGGTTATGTAATTGGGATGTTTGCACCATGCCGATGTTCTGAATGGCAAAACCTAAATTGCACCGGTGGAAATTCAGGAACAGAGCCATATTTGGTCTCACACTACCAGCTTCTAGCTCACGCAGCAGCCGTAAAGTTATACAAGGAGAAGTATCAGGCTGATCAGAAGGGTGTGATAGGGATAACAATACTGTCACACTGGTTTGTGCCCTTTTCTGATGCCAAGCACCATGAAGAAGCTGCGTGTTATCCGTCACACTGGTTTGTGCCCTTTTCTGATGCCAAGCACCATGAAGAAGCTGCTCTACGAGCATTGGATTTTATGTTTGGATGGTATATGGATCCCTTAACAAACGGTGAATATCCGCACAGCATGAGATCTCTTGTCGGAGATCGATTACCCAAGTTCACTAAAGAGCAATCCGAGATGTTAAAAGGTTCATTTGATTTTCTGGGATTGAATTACTACACCGCTAACTATGCTACTTATGCACCTCATCTCAAGAATGCTGCAAACCCTAGCTACTTTACAGATGCTGTCGCTACTGTTTCCACCGAGCGTAATGGTATTCCTATTGGTCAAAAGGCTGCTTCAGATTGGCTATCATTAACTTTATGCATGGCTCTCCGGTTAGGCATCCGTACCCTTATCTTTGCCTCCTACTTGTTCTTAGCAGTACAGGGACAAGTAGTCATAGTAGCAGAAAAGCTGCCCCCCAAAAGAAGTCGATCACGTAATTCTACTTCCTTCAGCCGCAGCACATTTCCGGCAGGTTTCATATTCGGGACAGCTTCCGCAGCTTACCAGTTCGAAGGGGCTGCAAAAGAAGGTGGTAGAGGACCGTGTGTATGGGACGCCTTTACTAACAAGTATCCAGAGAAGATCAAGGACCACAGCAGTGGAGATGTGGCTACTGATCAATATCATCGGTACAAGGAAGATGTGAAGATGTTGAAGGACATAGGTTGGGAGGCTTACAGATTCTCAATCTCATGGTCTAGACTGTTACCAAATGGAAAGCTGAGTGGGGGTGTGAACCAGGAAGGAATCAAATATTACAAGAATCTCATCAACGAGCTTCTAGCAAATAGTATAAGCCCCTACGTCACACTCTTTCATTGGGATACGCCCCAAGCTTTAGAAGAGGAATACGGTGGTTTCCTAAGCCCTCAAATTGTGAATCATTTCCAGGACTTTGCAGAGCTCTGCTATAAAGAATTTGGTGACAGAGTCAAGCATTGGACTACACTAAATGAGCCGCATACATACAGCGTCAATGGTTATGCAACCGGGGGAATGGCACCAGGCGGATGTTCTGCTTGGAAAAATCCTAATTGCACCGGTGGCGATTCAGGGACTGAGCCATATTTGGTGTCACATCACCTACTTCTAGCTCATGCCGCTGCTGTGAAGGTGTACCGAGACAAATTTCAGGCAAAACAGAAGGGTTTGATAGGGATAACGGTAAACACAGGATGGTTTGTGCCATATTCCGACTCAGAGCGTGACCAAGATGCTGCACAACGAGCAATGGATTTCAACCTCGGATGGCGGCTTCATCGTCGCTCCTTGTCTTTCCTTAAGGATTTCTAG

Protein Analysis

741

Amino Acids

83.02

Weight (kDa)

6.59

Isoelectric Point (pI)

34.3

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 37 - 291 3.5e-96 Glycosyl hydrolase family 1
Glyco_hydro_1 PF00232 295 - 414 6.6e-17 Glycosyl hydrolase family 1
Glyco_hydro_1 PF00232 463 - 731 2.2e-96 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 116, 1394
AccB1I GGYRCC 1 cut(s) 1933
AccB7I CCANNNNNTGG 1 cut(s) 348
AclWI GGATC 4 cut(s) 486, 605, 968, 981
AcsI RAATTY 5 cut(s) 225, 572, 703, 1850, 2060
AcuI CTGAAG 3 cut(s) 135, 1209, 1366
AcyI GRCGYC 1 cut(s) 1488
AfaI GTAC 4 cut(s) 1276, 1311, 1565, 2051
AfiI CCNNNNNNNGG 5 cut(s) 108, 289, 348, 381, 382
AflII CTTAAG 2 cut(s) 517, 2213
AgeI ACCGGT 2 cut(s) 695, 1973
AgsI TTSAA 5 cut(s) 11, 568, 1093, 1588, 2173
AhdI GACNNNNNGTC 1 cut(s) 1322
AhlI ACTAGT 1 cut(s) 62
AjnI CCWGG 4 cut(s) 614, 1671, 1821, 1936
AleI CACNNNNGTG 1 cut(s) 1530
Alw21I GWGCWC 2 cut(s) 116, 1839
Alw26I GTCTC 2 cut(s) 733, 2049
AlwI GGATC 4 cut(s) 486, 605, 968, 981
AlwNI CAGNNNCTG 2 cut(s) 1169, 1991
ApoI RAATTY 5 cut(s) 225, 572, 703, 1850, 2060
AsiGI ACCGGT 2 cut(s) 695, 1973
Asp700I GAANNNNTTC 1 cut(s) 1817
AspS9I GGNCC 3 cut(s) 194, 1472, 1522
AsuC2I CCSGG 1 cut(s) 1924
AsuHPI GGTGA 5 cut(s) 272, 590, 1001, 1868, 2006
AsuII TTCGAA 2 cut(s) 165, 1443
AvaII GGWCC 3 cut(s) 194, 1472, 1522
BaeGI GKGCMC 2 cut(s) 843, 903
BamHI GGATCC 1 cut(s) 973
BanI GGYRCC 1 cut(s) 1933
BanII GRGCYC 2 cut(s) 615, 1839
BarI GAAGNNNNNNTAC 4 cut(s) 921, 953, 1360, 1392
BauI CACGAG 1 cut(s) 346
Bbv12I GWGCWC 2 cut(s) 116, 1839
BccI CCATC 6 cut(s) 110, 179, 350, 957, 2103, 2175
BceAI ACGGC 2 cut(s) 262, 746
BcgI CGANNNNNNTGC 4 cut(s) 155, 189, 1433, 1467
BciT130I CCWGG 4 cut(s) 616, 1673, 1823, 1938
BciVI GTATCC 2 cut(s) 1515, 1750
BclI TGATCA 2 cut(s) 793, 1549
BcnI CCSGG 1 cut(s) 1924
BcoDI GTCTC 2 cut(s) 733, 2049
BcuI ACTAGT 1 cut(s) 62
BfaI CTAG 9 cut(s) 63, 354, 437, 746, 1152, 1632, 1715, 2024, 2224
BfrI CTTAAG 2 cut(s) 517, 2213
BfuAI ACCTGC 2 cut(s) 116, 1394
BfuI GTATCC 2 cut(s) 1515, 1750
BglII AGATCT 1 cut(s) 1010
Bme1390I CCNGG 5 cut(s) 616, 1673, 1823, 1924, 1938
Bme18I GGWCC 3 cut(s) 194, 1472, 1522
BmeRI GACNNNNNGTC 1 cut(s) 1322
BmgT120I GGNCC 3 cut(s) 194, 1472, 1522
BmiI GGNNCC 3 cut(s) 373, 975, 1935
BmrFI CCNGG 5 cut(s) 616, 1673, 1823, 1924, 1938
BmrI ACTGGG 1 cut(s) 484
BmsI GCATC 8 cut(s) 262, 312, 316, 841, 901, 1156, 1278, 2137
BmuI ACTGGG 1 cut(s) 484
BpmI CTGGAG 1 cut(s) 637
Bpu10I CCTNAGC 1 cut(s) 1796
Bpu14I TTCGAA 2 cut(s) 165, 1443
BpuEI CTTGAG 1 cut(s) 1118
BpuMI CCSGG 1 cut(s) 1924
Bsa29I ATCGAT 1 cut(s) 1027
BsaAI YACGTR 1 cut(s) 1367
BsaBI GATNNNNATC 2 cut(s) 276, 1554
BsaHI GRCGYC 1 cut(s) 1488
BsaI GGTCTC 1 cut(s) 733
BsaJI CCNNGG 3 cut(s) 614, 1923, 2176
BsaWI WCCGGW 4 cut(s) 108, 695, 1260, 1973
BsaXI ACNNNNNCTCC 2 cut(s) 323, 353
Bsc4I CCNNNNNNNGG 5 cut(s) 108, 289, 348, 381, 382
Bse118I RCCGGY 2 cut(s) 695, 1973
Bse1I ACTGG 6 cut(s) 160, 479, 599, 836, 896, 1438
Bse3DI GCAATG 2 cut(s) 259, 2169
Bse8I GATNNNNATC 2 cut(s) 276, 1554
BseBI CCWGG 4 cut(s) 616, 1673, 1823, 1938
BseCI ATCGAT 1 cut(s) 1027
BseDI CCNNGG 3 cut(s) 614, 1923, 2176
BseGI GGATG 7 cut(s) 301, 654, 968, 1269, 1949, 2114, 2186
BseJI GATNNNNATC 2 cut(s) 276, 1554
BseLI CCNNNNNNNGG 5 cut(s) 108, 289, 348, 381, 382
BseMI GCAATG 2 cut(s) 259, 2169
BseMII CTCAG 3 cut(s) 1646, 1983, 2145
BseNI ACTGG 6 cut(s) 160, 479, 599, 836, 896, 1438
BseSI GKGCMC 2 cut(s) 843, 903
BsgI GTGCAG 2 cut(s) 72, 2136
BshNI GGYRCC 1 cut(s) 1933
BshTI ACCGGT 2 cut(s) 695, 1973
BshVI ATCGAT 1 cut(s) 1027
BsiHKAI GWGCWC 2 cut(s) 116, 1839
BsiSI CCGG 7 cut(s) 109, 122, 696, 1261, 1400, 1923, 1974
BslFI GGGAC 6 cut(s) 154, 221, 1329, 1432, 1499, 2002
BslI CCNNNNNNNGG 5 cut(s) 108, 289, 348, 381, 382
BsmAI GTCTC 2 cut(s) 733, 2049
BsmFI GGGAC 6 cut(s) 154, 221, 1329, 1432, 1499, 2002
BsmI GAATGC 1 cut(s) 1144
Bso31I GGTCTC 1 cut(s) 733
Bsp119I TTCGAA 2 cut(s) 165, 1443
Bsp1286I GDGCHC 5 cut(s) 116, 615, 843, 903, 1839
Bsp143I GATC 9 cut(s) 478, 597, 793, 973, 1010, 1024, 1361, 1515, 1549
BspCNI CTCAG 3 cut(s) 1647, 1984, 2144
BspDI ATCGAT 1 cut(s) 1027
BspHI TCATGA 1 cut(s) 306
BspLI GGNNCC 3 cut(s) 373, 975, 1935
BspMI ACCTGC 2 cut(s) 116, 1394
BspPI GGATC 4 cut(s) 486, 605, 968, 981
BspT104I TTCGAA 2 cut(s) 165, 1443
BspT107I GGYRCC 1 cut(s) 1933
BspTI CTTAAG 2 cut(s) 517, 2213
BspTNI GGTCTC 1 cut(s) 733
BsrDI GCAATG 2 cut(s) 259, 2169
BsrFI RCCGGY 2 cut(s) 695, 1973
BsrI ACTGG 6 cut(s) 160, 479, 599, 836, 896, 1438
BssAI RCCGGY 2 cut(s) 695, 1973
BssECI CCNNGG 3 cut(s) 614, 1923, 2176
BssMI GATC 9 cut(s) 478, 597, 793, 973, 1010, 1024, 1361, 1515, 1549
BssNI GRCGYC 1 cut(s) 1488
BssSI CACGAG 1 cut(s) 346
Bst2BI CACGAG 1 cut(s) 346
Bst2UI CCWGG 4 cut(s) 616, 1673, 1823, 1938
Bst4CI ACNGT 8 cut(s) 509, 825, 989, 1180, 1476, 1638, 1787, 2098
Bst6I CTCTTC 3 cut(s) 184, 473, 1770
BstACI GRCGYC 1 cut(s) 1488
BstAFI CTTAAG 2 cut(s) 517, 2213
BstBAI YACGTR 1 cut(s) 1367
BstBI TTCGAA 2 cut(s) 165, 1443
BstDEI CTNAG 6 cut(s) 377, 1303, 1655, 1796, 1992, 2131
BstF5I GGATG 7 cut(s) 301, 654, 968, 1269, 1949, 2114, 2186
BstKTI GATC 9 cut(s) 481, 600, 796, 976, 1013, 1027, 1364, 1518, 1552
BstMAI GTCTC 2 cut(s) 733, 2049
BstMBI GATC 9 cut(s) 478, 597, 793, 973, 1010, 1024, 1361, 1515, 1549
BstNI CCWGG 4 cut(s) 616, 1673, 1823, 1938
BstSCI CCNGG 5 cut(s) 614, 1671, 1821, 1922, 1936
BstSLI GKGCMC 2 cut(s) 843, 903
BstX2I RGATCY 3 cut(s) 478, 973, 1010
BstXI CCANNNNNNTGG 2 cut(s) 204, 1532
BstYI RGATCY 3 cut(s) 478, 973, 1010
Bsu15I ATCGAT 1 cut(s) 1027
BsuI GTATCC 2 cut(s) 1515, 1750
BsuTUI ATCGAT 1 cut(s) 1027
BtsCI GGATG 7 cut(s) 301, 654, 968, 1269, 1949, 2114, 2186
BtsI GCAGTG 2 cut(s) 60, 1537
BtsIMutI CAGTG 5 cut(s) 60, 472, 829, 889, 1537
BveI ACCTGC 2 cut(s) 116, 1394
CaiI CAGNNNCTG 2 cut(s) 1169, 1991
CciI TCATGA 1 cut(s) 306
Cfr10I RCCGGY 2 cut(s) 695, 1973
Cfr13I GGNCC 3 cut(s) 194, 1472, 1522
ClaI ATCGAT 1 cut(s) 1027
CseI GACGC 2 cut(s) 1496, 1894
Csp6I GTAC 4 cut(s) 1275, 1310, 1564, 2050
CspAI ACCGGT 2 cut(s) 695, 1973
CviAII CATG 8 cut(s) 307, 660, 863, 923, 1006, 1252, 1626, 2030
CviQI GTAC 4 cut(s) 1275, 1310, 1564, 2050
DdeI CTNAG 6 cut(s) 377, 1303, 1655, 1796, 1992, 2131
DpnI GATC 9 cut(s) 480, 599, 795, 975, 1012, 1026, 1363, 1517, 1551
DpnII GATC 9 cut(s) 478, 597, 793, 973, 1010, 1024, 1361, 1515, 1549
DriI GACNNNNNGTC 1 cut(s) 1322
Eam1104I CTCTTC 3 cut(s) 184, 473, 1770
Eam1105I GACNNNNNGTC 1 cut(s) 1322
EarI CTCTTC 3 cut(s) 184, 473, 1770
EciI GGCGGA 1 cut(s) 1956
Ecl136II GAGCTC 1 cut(s) 1837
Eco24I GRGCYC 2 cut(s) 615, 1839
Eco31I GGTCTC 1 cut(s) 733
Eco47I GGWCC 3 cut(s) 194, 1472, 1522
Eco53kI GAGCTC 1 cut(s) 1837
Eco57I CTGAAG 3 cut(s) 135, 1209, 1366
EcoICRI GAGCTC 1 cut(s) 1837
EcoRII CCWGG 4 cut(s) 614, 1671, 1821, 1936
EcoT22I ATGCAT 2 cut(s) 277, 1253
EcoT38I GRGCYC 2 cut(s) 615, 1839
FaeI CATG 8 cut(s) 310, 663, 866, 926, 1009, 1255, 1629, 2033
FaqI GGGAC 6 cut(s) 154, 221, 1329, 1432, 1499, 2002
FatI CATG 8 cut(s) 306, 659, 862, 922, 1005, 1251, 1625, 2029
FauNDI CATATG 1 cut(s) 203
FbaI TGATCA 2 cut(s) 793, 1549
FokI GGATG 7 cut(s) 308, 661, 975, 1256, 1956, 2121, 2193
FriOI GRGCYC 2 cut(s) 615, 1839
FspBI CTAG 9 cut(s) 63, 354, 437, 746, 1152, 1632, 1715, 2024, 2224
GsuI CTGGAG 1 cut(s) 637
HapII CCGG 7 cut(s) 109, 122, 696, 1261, 1400, 1923, 1974
HgaI GACGC 2 cut(s) 1496, 1894
Hin1I GRCGYC 1 cut(s) 1488
Hin1II CATG 8 cut(s) 310, 663, 866, 926, 1009, 1255, 1629, 2033
HindIII AAGCTT 2 cut(s) 489, 1767
HinfI GANTC 9 cut(s) 336, 402, 1614, 1680, 1696, 1813, 1863, 1982, 2129
HpaII CCGG 7 cut(s) 109, 122, 696, 1261, 1400, 1923, 1974
HphI GGTGA 5 cut(s) 272, 590, 1001, 1868, 2006
Hpy166II GTNNAC 5 cut(s) 535, 1041, 1669, 2050, 2101
Hpy188III TCNNGA 8 cut(s) 230, 307, 354, 708, 1135, 1417, 1508, 1632
Hpy8I GTNNAC 5 cut(s) 535, 1041, 1669, 2050, 2101
Hpy99I CGWCG 2 cut(s) 95, 2199
HpyCH4III ACNGT 8 cut(s) 509, 825, 989, 1180, 1476, 1638, 1787, 2098
HpyCH4IV ACGT 3 cut(s) 93, 1366, 1737
HpyF3I CTNAG 6 cut(s) 377, 1303, 1655, 1796, 1992, 2131
HpySE526I ACGT 3 cut(s) 93, 1366, 1737
Hsp92I GRCGYC 1 cut(s) 1488
Hsp92II CATG 8 cut(s) 310, 663, 866, 926, 1009, 1255, 1629, 2033
Ksp22I TGATCA 2 cut(s) 793, 1549
Kzo9I GATC 9 cut(s) 478, 597, 793, 973, 1010, 1024, 1361, 1515, 1549
LmnI GCTCC 3 cut(s) 111, 618, 2204
LweI GCATC 8 cut(s) 262, 312, 316, 841, 901, 1156, 1278, 2137
MaeI CTAG 9 cut(s) 63, 354, 437, 746, 1152, 1632, 1715, 2024, 2224
MaeII ACGT 3 cut(s) 93, 1366, 1737
MaeIII GTNAC 9 cut(s) 360, 460, 825, 885, 1638, 1738, 1856, 2007, 2138
MalI GATC 9 cut(s) 480, 599, 795, 975, 1012, 1026, 1363, 1517, 1551
MboI GATC 9 cut(s) 478, 597, 793, 973, 1010, 1024, 1361, 1515, 1549
MflI RGATCY 3 cut(s) 478, 973, 1010
MhlI GDGCHC 5 cut(s) 116, 615, 843, 903, 1839
MlyI GAGTC 2 cut(s) 1872, 2123
MmeI TCCRAC 2 cut(s) 1000, 2151
Mph1103I ATGCAT 2 cut(s) 277, 1253
MroXI GAANNNNTTC 1 cut(s) 1817
MseI TTAA 7 cut(s) 518, 588, 605, 980, 1064, 1241, 2214
MslI CAYNNNNRTG 2 cut(s) 664, 1530
MspA1I CMGCKG 1 cut(s) 2036
MspCI CTTAAG 2 cut(s) 517, 2213
MspI CCGG 7 cut(s) 109, 122, 696, 1261, 1400, 1923, 1974
MspR9I CCNGG 5 cut(s) 616, 1673, 1823, 1924, 1938
Mva1269I GAATGC 1 cut(s) 1144
MvaI CCWGG 4 cut(s) 616, 1673, 1823, 1938
NciI CCSGG 1 cut(s) 1924
NdeI CATATG 1 cut(s) 203
NdeII GATC 9 cut(s) 478, 597, 793, 973, 1010, 1024, 1361, 1515, 1549
NlaIII CATG 8 cut(s) 310, 663, 866, 926, 1009, 1255, 1629, 2033
NlaIV GGNNCC 3 cut(s) 373, 975, 1935
NmuCI GTSAC 7 cut(s) 460, 825, 885, 1738, 1856, 2007, 2138
NsiI ATGCAT 2 cut(s) 277, 1253
NspV TTCGAA 2 cut(s) 165, 1443
OliI CACNNNNGTG 1 cut(s) 1530
PagI TCATGA 1 cut(s) 306
PcsI WCGNNNNNNNCGW 1 cut(s) 759
PctI GAATGC 1 cut(s) 1144
PdmI GAANNNNTTC 1 cut(s) 1817
PfeI GAWTC 7 cut(s) 336, 402, 1614, 1680, 1696, 1813, 1982
PflFI GACNNNGTC 1 cut(s) 1862
PflMI CCANNNNNTGG 1 cut(s) 348
PfoI TCCNGGA 1 cut(s) 1821
PinAI ACCGGT 2 cut(s) 695, 1973
PleI GAGTC 2 cut(s) 1871, 2123
PpsI GAGTC 2 cut(s) 1871, 2123
Ppu21I YACGTR 1 cut(s) 1367
Psp124BI GAGCTC 1 cut(s) 1839
Psp6I CCWGG 4 cut(s) 614, 1671, 1821, 1936
PspGI CCWGG 4 cut(s) 614, 1671, 1821, 1936
PspN4I GGNNCC 3 cut(s) 373, 975, 1935
PspPI GGNCC 3 cut(s) 194, 1472, 1522
PstNI CAGNNNCTG 2 cut(s) 1169, 1991
PsuI RGATCY 3 cut(s) 478, 973, 1010
PsyI GACNNNGTC 1 cut(s) 1862
RsaI GTAC 4 cut(s) 1276, 1311, 1565, 2051
RsaNI GTAC 4 cut(s) 1275, 1310, 1564, 2050
RseI CAYNNNNRTG 2 cut(s) 664, 1530
SacI GAGCTC 1 cut(s) 1839
SaqAI TTAA 7 cut(s) 518, 588, 605, 980, 1064, 1241, 2214
Sau3AI GATC 9 cut(s) 478, 597, 793, 973, 1010, 1024, 1361, 1515, 1549
Sau96I GGNCC 3 cut(s) 194, 1472, 1522
SchI GAGTC 2 cut(s) 1872, 2123
ScrFI CCNGG 5 cut(s) 616, 1673, 1823, 1924, 1938
SduI GDGCHC 5 cut(s) 116, 615, 843, 903, 1839
SfaNI GCATC 8 cut(s) 262, 312, 316, 841, 901, 1156, 1278, 2137
SfuI TTCGAA 2 cut(s) 165, 1443
SgrAI CRCCGGYG 2 cut(s) 695, 1973
SinI GGWCC 3 cut(s) 194, 1472, 1522
SmiMI CAYNNNNRTG 2 cut(s) 664, 1530
SmlI CTYRAG 3 cut(s) 517, 1133, 2213
SmoI CTYRAG 3 cut(s) 517, 1133, 2213
SpeI ACTAGT 1 cut(s) 62
SspI AATATT 2 cut(s) 410, 1688
SspMI CTAG 9 cut(s) 63, 354, 437, 746, 1152, 1632, 1715, 2024, 2224
SstI GAGCTC 1 cut(s) 1839
StyD4I CCNGG 5 cut(s) 614, 1671, 1821, 1922, 1936
TaaI ACNGT 8 cut(s) 509, 825, 989, 1180, 1476, 1638, 1787, 2098
TaiI ACGT 3 cut(s) 96, 1369, 1740
TaqI TCGA 4 cut(s) 165, 1027, 1360, 1443
TatI WGTACW 1 cut(s) 1309
TauI GCSGC 4 cut(s) 1389, 1894, 2036, 2188
TfiI GAWTC 7 cut(s) 336, 402, 1614, 1680, 1696, 1813, 1982
Tru1I TTAA 7 cut(s) 518, 588, 605, 980, 1064, 1241, 2214
Tru9I TTAA 7 cut(s) 518, 588, 605, 980, 1064, 1241, 2214
TscAI CASTG 5 cut(s) 60, 479, 836, 896, 1537
TseFI GTSAC 7 cut(s) 460, 825, 885, 1738, 1856, 2007, 2138
Tsp45I GTSAC 7 cut(s) 460, 825, 885, 1738, 1856, 2007, 2138
TspDTI ATGAA 9 cut(s) 121, 323, 516, 879, 939, 1062, 1399, 1739, 2180
TspGWI ACGGA 2 cut(s) 873, 1262
TspRI CASTG 5 cut(s) 60, 479, 836, 896, 1537
Tth111I GACNNNGTC 1 cut(s) 1862
Van91I CCANNNNNTGG 1 cut(s) 348
Vha464I CTTAAG 2 cut(s) 517, 2213
VpaK11BI GGWCC 3 cut(s) 194, 1472, 1522
XapI RAATTY 5 cut(s) 225, 572, 703, 1850, 2060
XbaI TCTAGA 2 cut(s) 353, 1631
XmnI GAANNNNTTC 1 cut(s) 1817
XspI CTAG 9 cut(s) 63, 354, 437, 746, 1152, 1632, 1715, 2024, 2224
Zsp2I ATGCAT 2 cut(s) 277, 1253
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.