MD15G1441900.v1.1

beta-glucosidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000117
Physical Location & Seq
Reverse (-)
54171329 .. 54176113
4785 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1441900.v1.1.491

Sequence Viewer

Length: 1482 bp
ATGATTAAGTTAGGTTTCATCCTCCTGCTTGTTCTTGGCTGTGCAGTTACAACTAGTAAATCTGCCAAGCAAAATCATCCCAAAGACTATGCTTCATGTGACGCTCATCACATCTTCAACCGGAGCAGTTTTTCCTCCGATTTCATATTTGGGTCTGCCGGAGCGGCTTACCAGTTTGAAGGTGCTGCAAAGGAAGGGGGTAGAGGACCATGTGTTTGGGATACATTCACTCACAAATACCCAGATAAAATAACGGATCGCAGCAATGGAGATGTGGCTGTTGATTCATATCATCGCTATAAGGAAGATGTTGGGATTCTCAAGGATATGGGTTGGGATTTTTACAGATTTTCAATCTCATGGTCTCGCTTGTTACCTAGTATAAAGCCCTTCGTGACACTTTTTCATTGGGATTTTCCCCAGGCTTTGGAGGATGAGTACCTTGGCTTCTTAAGCCCTAACAGTGTGAGTGATTTTCGGGACTTTGCAGACCTCTGCTTTAAAGAGTTTGGTGACAAAATTAAGCACTGGATCACGTTAAATGAGCCTCAAACTTATAGCGTCCAGGGTTATACAGTTGGAGCATTTGCTCCAGGCCGATGCTCTAACCATACAAAATGCAAAGAGGGTGGGAATTCCGCAACGGAGCCATATTTGTCGGCACATCACCAACTTCTAGCTCATGCAGCTGCTGTAAATGTGTATAGAGACAAGTATCAAGCTACACAAAAGGGCGTGATCGGAATAACACTTAACTCAGGTTGGTCTGTTCCATTTTCTAATTCAACGGAAGATAAAGATGCTGCAGTTAGAGCACTTGATTTTTCGTATGGATGGTTTATGGATCCGGTGACAAGCGGTCGGTATCCAAAGAGTATGCAACGCCTAATTGGAAATCGATTGCCCAACTTCACCAAAGAGCAATCCAAAATGCTAAAAGGTTCATATGACTTTGTTGGGTTGAATTACTACTCATCGTCTTATGCAAAAGATGTTACTGCCAATAAGTCTGTAAAGCAGCCAAGCCAGTCAACCGACTCCAACGCTGCTTCGGATTGGCTTTATATTTATCCACAAGGACTTCAAGAACTGTTAACTTACACAAAGATAAAGTATAAAAATCCAATTATTTACATCACAGAAAATGGTAGTTACGGAGTTGACGAGGCAAATGATCCCAAATTATCACTTGAGGAATCTCTCATTGACAAAGAAAGAATTAAATATTACGATTCGCATCTTTATTACGTTCAAGAAGCCATTAAGAATGGCGCTAATGTGAAAGGGTTCTTTGCGTGGTCATTGCTTGACAACTTTGAATGGGTTAACGGTTACACTGTGAGATTTGGTATCATCTATGTGGATTACAAAAACGGACTCAAAAGACATTACAAACTCTCAGCTCATTGGTGGAAGAATCTTCTTAAAGGTAATTCCCACTCGGCTTCCAAACATAATTCTTCAAAGGGCAGCAAAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_1

Protein Analysis

494

Amino Acids

55.86

Weight (kDa)

8.66

Isoelectric Point (pI)

25.86

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 42 - 127 8.9e-34 Glycosyl hydrolase family 1
Glyco_hydro_1 PF00232 128 - 478 8.5e-102 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 427
AccBSI CCGCTC 1 cut(s) 164
AciI CCGC 3 cut(s) 164, 639, 858
AclWI GGATC 5 cut(s) 264, 539, 839, 852, 1169
AcsI RAATTY 1 cut(s) 634
AfaI GTAC 1 cut(s) 440
AfiI CCNNNNNNNGG 1 cut(s) 427
AflII CTTAAG 1 cut(s) 451
AgsI TTSAA 9 cut(s) 118, 179, 354, 786, 964, 1085, 1253, 1319, 1464
AhdI GACNNNNNGTC 1 cut(s) 858
AhlI ACTAGT 1 cut(s) 53
AjnI CCWGG 3 cut(s) 420, 564, 592
AluBI AGCT 4 cut(s) 680, 689, 722, 1403
AluI AGCT 4 cut(s) 680, 689, 722, 1403
Alw21I GWGCWC 1 cut(s) 817
Alw26I GTCTC 2 cut(s) 369, 702
AlwI GGATC 5 cut(s) 264, 539, 839, 852, 1169
AlwNI CAGNNNCTG 1 cut(s) 692
AoxI GGCC 1 cut(s) 595
ApeKI GCWGC 8 cut(s) 185, 261, 686, 689, 803, 1018, 1046, 1470
ApoI RAATTY 1 cut(s) 634
ArsI GACNNNNNNTTYG 2 cut(s) 198, 230
Asp700I GAANNNNTTC 1 cut(s) 1286
AspLEI GCGC 1 cut(s) 1274
AspS9I GGNCC 1 cut(s) 206
AsuHPI GGTGA 4 cut(s) 524, 659, 862, 904
AvaII GGWCC 1 cut(s) 206
BamHI GGATCC 1 cut(s) 844
BarI GAAGNNNNNNTAC 2 cut(s) 431, 463
Bbv12I GWGCWC 1 cut(s) 817
BbvI GCAGC 7 cut(s) 172, 273, 676, 698, 790, 1030, 1033
BccI CCATC 1 cut(s) 828
BciT130I CCWGG 3 cut(s) 422, 566, 594
BciVI GTATCC 2 cut(s) 214, 876
BcoDI GTCTC 2 cut(s) 369, 702
BcuI ACTAGT 1 cut(s) 53
BfaI CTAG 3 cut(s) 54, 378, 677
BfmI CTRYAG 1 cut(s) 804
BfoI RGCGCY 1 cut(s) 1275
BfrI CTTAAG 1 cut(s) 451
BfuI GTATCC 2 cut(s) 214, 876
BglI GCCNNNNNGGC 1 cut(s) 164
BisI GCNGC 9 cut(s) 165, 186, 262, 687, 690, 804, 1019, 1047, 1471
BlsI GCNGC 9 cut(s) 166, 187, 263, 688, 691, 805, 1020, 1048, 1472
Bme1390I CCNGG 3 cut(s) 422, 566, 594
Bme18I GGWCC 1 cut(s) 206
BmeRI GACNNNNNGTC 1 cut(s) 858
BmgT120I GGNCC 1 cut(s) 206
BmiI GGNNCC 2 cut(s) 648, 846
BmrFI CCNGG 3 cut(s) 422, 566, 594
BmsI GCATC 3 cut(s) 590, 790, 1246
BpmI CTGGAG 1 cut(s) 576
BpuEI CTTGAG 2 cut(s) 305, 1211
Bsa29I ATCGAT 1 cut(s) 898
BsaBI GATNNNNATC 2 cut(s) 288, 1236
BsaI GGTCTC 1 cut(s) 369
BsaJI CCNNGG 3 cut(s) 420, 442, 565
BsaWI WCCGGW 2 cut(s) 120, 847
BsaXI ACNNNNNCTCC 2 cut(s) 422, 452
Bsc4I CCNNNNNNNGG 1 cut(s) 427
Bse1I ACTGG 3 cut(s) 172, 533, 1027
Bse3DI GCAATG 2 cut(s) 271, 1301
Bse8I GATNNNNATC 2 cut(s) 288, 1236
BseBI CCWGG 3 cut(s) 422, 566, 594
BseCI ATCGAT 1 cut(s) 898
BseDI CCNNGG 3 cut(s) 420, 442, 565
BseGI GGATG 4 cut(s) 18, 76, 439, 839
BseJI GATNNNNATC 2 cut(s) 288, 1236
BseLI CCNNNNNNNGG 1 cut(s) 427
BseMI GCAATG 2 cut(s) 271, 1301
BseMII CTCAG 2 cut(s) 771, 1413
BseNI ACTGG 3 cut(s) 172, 533, 1027
BseXI GCAGC 7 cut(s) 172, 273, 676, 698, 790, 1030, 1033
BsgI GTGCAG 1 cut(s) 63
Bsh1285I CGRYCG 1 cut(s) 862
BshFI GGCC 1 cut(s) 597
BshVI ATCGAT 1 cut(s) 898
BsiEI CGRYCG 1 cut(s) 862
BsiHKAI GWGCWC 1 cut(s) 817
BsiSI CCGG 3 cut(s) 121, 159, 848
BslFI GGGAC 1 cut(s) 494
BslI CCNNNNNNNGG 1 cut(s) 427
BsmAI GTCTC 2 cut(s) 369, 702
BsmFI GGGAC 1 cut(s) 494
BsnI GGCC 1 cut(s) 597
Bso31I GGTCTC 1 cut(s) 369
Bsp1286I GDGCHC 1 cut(s) 817
Bsp143I GATC 5 cut(s) 256, 531, 738, 844, 1174
BspACI CCGC 3 cut(s) 164, 639, 858
BspANI GGCC 1 cut(s) 597
BspCNI CTCAG 2 cut(s) 770, 1412
BspDI ATCGAT 1 cut(s) 898
BspLI GGNNCC 2 cut(s) 648, 846
BspMAI CTGCAG 1 cut(s) 808
BspPI GGATC 5 cut(s) 264, 539, 839, 852, 1169
BspTI CTTAAG 1 cut(s) 451
BspTNI GGTCTC 1 cut(s) 369
BsrBI CCGCTC 1 cut(s) 164
BsrDI GCAATG 2 cut(s) 271, 1301
BsrI ACTGG 3 cut(s) 172, 533, 1027
BssECI CCNNGG 3 cut(s) 420, 442, 565
BssMI GATC 5 cut(s) 256, 531, 738, 844, 1174
BssT1I CCWWGG 1 cut(s) 442
Bst2UI CCWGG 3 cut(s) 422, 566, 594
Bst4CI ACNGT 5 cut(s) 464, 577, 1092, 1331, 1339
BstAFI CTTAAG 1 cut(s) 451
BstDEI CTNAG 2 cut(s) 757, 1399
BstF5I GGATG 4 cut(s) 18, 76, 439, 839
BstH2I RGCGCY 1 cut(s) 1275
BstHHI GCGC 1 cut(s) 1274
BstKTI GATC 5 cut(s) 259, 534, 741, 847, 1177
BstMAI GTCTC 2 cut(s) 369, 702
BstMBI GATC 5 cut(s) 256, 531, 738, 844, 1174
BstMCI CGRYCG 1 cut(s) 862
BstMWI GCNNNNNNNGC 4 cut(s) 164, 453, 686, 812
BstNI CCWGG 3 cut(s) 422, 566, 594
BstSCI CCNGG 3 cut(s) 420, 564, 592
BstSFI CTRYAG 1 cut(s) 804
BstV1I GCAGC 7 cut(s) 172, 273, 676, 698, 790, 1030, 1033
BstX2I RGATCY 1 cut(s) 844
BstXI CCANNNNNNTGG 1 cut(s) 216
BstYI RGATCY 1 cut(s) 844
Bsu15I ATCGAT 1 cut(s) 898
BsuI GTATCC 2 cut(s) 214, 876
BsuRI GGCC 1 cut(s) 597
BsuTUI ATCGAT 1 cut(s) 898
BtgZI GCGATG 1 cut(s) 278
BtsCI GGATG 4 cut(s) 18, 76, 439, 839
BtsIMutI CAGTG 3 cut(s) 469, 526, 1335
CaiI CAGNNNCTG 1 cut(s) 692
CfoI GCGC 1 cut(s) 1274
Cfr13I GGNCC 1 cut(s) 206
ClaI ATCGAT 1 cut(s) 898
CseI GACGC 2 cut(s) 110, 550
Csp6I GTAC 1 cut(s) 439
CspCI CAANNNNNGTGG 2 cut(s) 610, 645
CviAII CATG 4 cut(s) 96, 210, 360, 683
CviQI GTAC 1 cut(s) 439
DdeI CTNAG 2 cut(s) 757, 1399
DpnI GATC 5 cut(s) 258, 533, 740, 846, 1176
DpnII GATC 5 cut(s) 256, 531, 738, 844, 1174
DraI TTTAAA 1 cut(s) 502
DriI GACNNNNNGTC 1 cut(s) 858
Eam1105I GACNNNNNGTC 1 cut(s) 858
Eco130I CCWWGG 1 cut(s) 442
Eco31I GGTCTC 1 cut(s) 369
Eco47I GGWCC 1 cut(s) 206
EcoRI GAATTC 1 cut(s) 634
EcoRII CCWGG 3 cut(s) 420, 564, 592
EcoT14I CCWWGG 1 cut(s) 442
ErhI CCWWGG 1 cut(s) 442
FaeI CATG 4 cut(s) 99, 213, 363, 686
FaqI GGGAC 1 cut(s) 494
FatI CATG 4 cut(s) 95, 209, 359, 682
FauNDI CATATG 1 cut(s) 946
Fnu4HI GCNGC 9 cut(s) 165, 186, 262, 687, 690, 804, 1019, 1047, 1471
FokI GGATG 4 cut(s) 5, 63, 446, 846
Fsp4HI GCNGC 9 cut(s) 165, 186, 262, 687, 690, 804, 1019, 1047, 1471
FspBI CTAG 3 cut(s) 54, 378, 677
GlaI GCGC 1 cut(s) 1273
GluI GCNGC 9 cut(s) 165, 186, 262, 687, 690, 804, 1019, 1047, 1471
GsuI CTGGAG 1 cut(s) 576
HaeII RGCGCY 1 cut(s) 1275
HaeIII GGCC 1 cut(s) 597
HapII CCGG 3 cut(s) 121, 159, 848
HgaI GACGC 2 cut(s) 110, 550
HhaI GCGC 1 cut(s) 1274
Hin1II CATG 4 cut(s) 99, 213, 363, 686
Hin6I GCGC 1 cut(s) 1272
HinP1I GCGC 1 cut(s) 1272
HincII GTYRAC 4 cut(s) 1032, 1095, 1162, 1327
HindII GTYRAC 4 cut(s) 1032, 1095, 1162, 1327
HinfI GANTC 7 cut(s) 284, 316, 1037, 1196, 1232, 1377, 1417
HpaI GTTAAC 2 cut(s) 1095, 1327
HpaII CCGG 3 cut(s) 121, 159, 848
HphI GGTGA 4 cut(s) 524, 659, 862, 904
Hpy166II GTNNAC 4 cut(s) 1032, 1095, 1162, 1327
Hpy188I TCNGA 3 cut(s) 139, 743, 1054
Hpy188III TCNNGA 4 cut(s) 394, 479, 1085, 1253
Hpy8I GTNNAC 4 cut(s) 1032, 1095, 1162, 1327
HpyAV CCTTC 3 cut(s) 173, 188, 400
HpyCH4III ACNGT 5 cut(s) 464, 577, 1092, 1331, 1339
HpyCH4IV ACGT 2 cut(s) 536, 1248
HpyCH4V TGCA 8 cut(s) 44, 188, 488, 621, 686, 806, 880, 986
HpyF10VI GCNNNNNNNGC 4 cut(s) 164, 453, 686, 812
HpyF3I CTNAG 2 cut(s) 757, 1399
HpySE526I ACGT 2 cut(s) 536, 1248
Hsp92II CATG 4 cut(s) 99, 213, 363, 686
HspAI GCGC 1 cut(s) 1272
KspAI GTTAAC 2 cut(s) 1095, 1327
Kzo9I GATC 5 cut(s) 256, 531, 738, 844, 1174
LmnI GCTCC 5 cut(s) 123, 161, 581, 595, 646
Lsp1109I GCAGC 7 cut(s) 172, 273, 676, 698, 790, 1030, 1033
LweI GCATC 3 cut(s) 590, 790, 1246
MaeI CTAG 3 cut(s) 54, 378, 677
MaeII ACGT 2 cut(s) 536, 1248
MaeIII GTNAC 9 cut(s) 46, 98, 372, 394, 512, 850, 994, 1151, 1331
MalI GATC 5 cut(s) 258, 533, 740, 846, 1176
MbiI CCGCTC 1 cut(s) 164
MboI GATC 5 cut(s) 256, 531, 738, 844, 1174
MboII GAAGA 6 cut(s) 106, 317, 803, 1412, 1426, 1452
MflI RGATCY 1 cut(s) 844
MhlI GDGCHC 1 cut(s) 817
MlyI GAGTC 2 cut(s) 1031, 1371
MmeI TCCRAC 2 cut(s) 559, 1065
MnlI CCTC 9 cut(s) 32, 145, 197, 424, 503, 558, 619, 1159, 1186
MroXI GAANNNNTTC 1 cut(s) 1286
MslI CAYNNNNRTG 1 cut(s) 1358
MspA1I CMGCKG 1 cut(s) 689
MspCI CTTAAG 1 cut(s) 451
MspI CCGG 3 cut(s) 121, 159, 848
MspR9I CCNGG 3 cut(s) 422, 566, 594
MvaI CCWGG 3 cut(s) 422, 566, 594
MwoI GCNNNNNNNGC 4 cut(s) 164, 453, 686, 812
NdeI CATATG 1 cut(s) 946
NdeII GATC 5 cut(s) 256, 531, 738, 844, 1174
NlaIII CATG 4 cut(s) 99, 213, 363, 686
NlaIV GGNNCC 2 cut(s) 648, 846
NmeAIII GCCGAG 1 cut(s) 1421
NmuCI GTSAC 4 cut(s) 98, 394, 512, 850
PcsI WCGNNNNNNNCGW 1 cut(s) 1161
PdmI GAANNNNTTC 1 cut(s) 1286
PfeI GAWTC 5 cut(s) 284, 316, 1196, 1232, 1417
PflMI CCANNNNNTGG 1 cut(s) 427
PkrI GCNGC 9 cut(s) 166, 187, 263, 688, 691, 805, 1020, 1048, 1472
PleI GAGTC 2 cut(s) 1031, 1371
PpsI GAGTC 2 cut(s) 1031, 1371
Psp6I CCWGG 3 cut(s) 420, 564, 592
PspGI CCWGG 3 cut(s) 420, 564, 592
PspN4I GGNNCC 2 cut(s) 648, 846
PspPI GGNCC 1 cut(s) 206
PstI CTGCAG 1 cut(s) 808
PstNI CAGNNNCTG 1 cut(s) 692
PsuI RGATCY 1 cut(s) 844
PvuII CAGCTG 1 cut(s) 689
RsaI GTAC 1 cut(s) 440
RsaNI GTAC 1 cut(s) 439
RseI CAYNNNNRTG 1 cut(s) 1358
SatI GCNGC 9 cut(s) 165, 186, 262, 687, 690, 804, 1019, 1047, 1471
Sau3AI GATC 5 cut(s) 256, 531, 738, 844, 1174
Sau96I GGNCC 1 cut(s) 206
SchI GAGTC 2 cut(s) 1031, 1371
ScrFI CCNGG 3 cut(s) 422, 566, 594
SduI GDGCHC 1 cut(s) 817
SfaNI GCATC 3 cut(s) 590, 790, 1246
SfcI CTRYAG 1 cut(s) 804
SinI GGWCC 1 cut(s) 206
SmiMI CAYNNNNRTG 1 cut(s) 1358
SmlI CTYRAG 3 cut(s) 320, 451, 1190
SmoI CTYRAG 3 cut(s) 320, 451, 1190
SpeI ACTAGT 1 cut(s) 53
SsiI CCGC 3 cut(s) 164, 639, 858
SspI AATATT 1 cut(s) 1226
SspMI CTAG 3 cut(s) 54, 378, 677
StyD4I CCNGG 3 cut(s) 420, 564, 592
StyI CCWWGG 1 cut(s) 442
TaaI ACNGT 5 cut(s) 464, 577, 1092, 1331, 1339
TaiI ACGT 2 cut(s) 539, 1251
TaqI TCGA 1 cut(s) 898
TauI GCSGC 1 cut(s) 167
TfiI GAWTC 5 cut(s) 284, 316, 1196, 1232, 1417
TscAI CASTG 3 cut(s) 469, 533, 1342
TseFI GTSAC 4 cut(s) 98, 394, 512, 850
TseI GCWGC 8 cut(s) 185, 261, 686, 689, 803, 1018, 1046, 1470
Tsp45I GTSAC 4 cut(s) 98, 394, 512, 850
TspDTI ATGAA 6 cut(s) 7, 84, 133, 276, 395, 933
TspGWI ACGGA 5 cut(s) 269, 659, 803, 1170, 1389
TspRI CASTG 3 cut(s) 469, 533, 1342
Van91I CCANNNNNTGG 1 cut(s) 427
Vha464I CTTAAG 1 cut(s) 451
VpaK11BI GGWCC 1 cut(s) 206
XapI RAATTY 1 cut(s) 634
XmnI GAANNNNTTC 1 cut(s) 1286
XspI CTAG 3 cut(s) 54, 378, 677
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.