Rw5G047520

Belongs to the glycosyl hydrolase 1 family

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr5
Physical Location & Seq
Forward (+)
82242623 .. 82248785
6163 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw5G047520.1

Sequence Viewer

Length: 1539 bp
ATGGCACTTCAAGGCACTCTCATCTCTGCAATCATACTTGTTTTTAGCTGTGCAGTGGCAACTAGTATAGCTACCGCCCCAAGCCATTACGACGTTGCTTCCATCAACCGGAGCACCTTTCCGGCAGGTTTCATATTTGGGACAGCTTCTTCAGCTTACCAGTTCGAAGGTGCTGCAAAAGAAGATGGAAGAGGACCAAGCATATGGGACACATACACTCACAAAATTCCAGATAAGATAAAAGACCGCAGCACTGGAGATGTCGCTATTGATGCATATCACCGCTACAAGGAGGATGTTGGCATCATGAAAAATATGGGTTTTGATGCTTACAGATTCTCCATCTCATGGTCTAGATTGTTACCAGATGGAACGCTAAGAGGGGGTGTGAATAAGGAAGGAATCAAATATTACAACAACCTCATAAACGAGCTTCTAGCCAAGGGTCTAAAGCCCTTTGTCACACTCTTCCATTGGGATCTTCCCCAAGCTTTAGAAGATGAATACGGTGGCTTCTTAAGCCCTCAAATTGTAAACCATTTCCAAGACTACGCAGAGCTATGCTTCAAGGAATTTGGTGATAGAGTTAAGGACTGGATCACATTAAACGAGCCCTGGAGCTACGCTAATGGTGGTTATGTAATTGGGACGTTTGCACCATGCCGATGTTCTGAATGGCAAAACCTAAATTGCACTGGTGGAAATTCAGGAACAGAGCCATATTTAGTTTCACACTACCAGCTTCTAGCTCACGCAGCAGCCGTAAAGTTATACAAGGAGAAGTATCAGGCTGATCAGAAGGGTGTGATAGGGATAACAATACTGTCACACTGGTTTGTGCCCTTTTCTGATGCCAAGCACCATGAAGAAGCTGCTCTACGAGCATTGGATTTTATGTTTGGATGGTATTTGGATCCCTTAACAAACGGTGAATATCCGCACAGCATGAGATCTCTTGTCGGAGATCGATTACCCAAGTTCACTAAAGAGCAATCCGAGATGTTAAAAGGTTCATTTGATTTTCTGGGATTGAATTACTACACCGCTAACTATGCTACTTATGCACCTCATCTCAAGAATGCAGCAAACCCTAGCTACTTTACAGATGCTGTCGCTACTGTTTCCACCGAGCGTAATGGTATTCCTATTGGTCAAAAGGCTGCTTCAGATTGGCTCTATGTTTATCCAGAAGGAATTCGAGAACTATTGCTTTACACGAAGGAAAAGTACAATAATCCACTTATTTACATCACTGAAAATGGAAGGGATGAGCACAATGATCCCAAATTATCACTTGAGGAAGCCCTAGCCGATACTCACCGAATTGAGTTTTACTATCGACATCTTTATTATCTTCATGAAGCGATCAAGGATGGCGTTAACGTGAAGGGATATTTTGCTTGGTCTTTGTTTGACAACTTCGAATGGAATATGGGTTACAGTGTAAGGTTTGGCATCAACTATGTGGATTACAATGATGGGCTCAAAAGATACCCTAAACTCTCAGCACACTGGTTCAAGAATTTTCTTGAAAATTAG

Protein Analysis

512

Amino Acids

58.38

Weight (kDa)

5.87

Isoelectric Point (pI)

27.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 37 - 511 1.1e-159 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 116
AccB7I CCANNNNNTGG 1 cut(s) 348
AciI CCGC 5 cut(s) 75, 247, 283, 938, 1044
AclWI GGATC 5 cut(s) 486, 605, 908, 921, 1274
AcsI RAATTY 5 cut(s) 225, 572, 703, 1194, 1522
AcuI CTGAAG 2 cut(s) 135, 1149
AfaI GTAC 1 cut(s) 1229
AfiI CCNNNNNNNGG 3 cut(s) 108, 289, 348
AflII CTTAAG 1 cut(s) 517
AgsI TTSAA 5 cut(s) 11, 568, 1033, 1519, 1532
AhlI ACTAGT 1 cut(s) 62
AjnI CCWGG 1 cut(s) 614
Alw21I GWGCWC 2 cut(s) 116, 1275
AlwI GGATC 5 cut(s) 486, 605, 908, 921, 1274
AlwNI CAGNNNCTG 1 cut(s) 1109
ApeKI GCWGC 7 cut(s) 173, 249, 755, 758, 872, 1082, 1160
ApoI RAATTY 5 cut(s) 225, 572, 703, 1194, 1522
Asp700I GAANNNNTTC 1 cut(s) 1194
AspS9I GGNCC 1 cut(s) 194
AsuHPI GGTGA 4 cut(s) 272, 590, 941, 1310
AsuII TTCGAA 2 cut(s) 165, 1422
AvaII GGWCC 1 cut(s) 194
BaeGI GKGCMC 1 cut(s) 843
BamHI GGATCC 1 cut(s) 913
BanII GRGCYC 2 cut(s) 615, 1485
BarI GAAGNNNNNNTAC 4 cut(s) 861, 893, 1211, 1243
Bbv12I GWGCWC 2 cut(s) 116, 1275
BbvI GCAGC 7 cut(s) 160, 261, 767, 770, 859, 1094, 1147
BccI CCATC 7 cut(s) 110, 179, 350, 362, 897, 1367, 1472
BceAI ACGGC 1 cut(s) 746
BcgI CGANNNNNNTGC 2 cut(s) 155, 189
BciT130I CCWGG 1 cut(s) 616
BclI TGATCA 1 cut(s) 793
BcuI ACTAGT 1 cut(s) 62
BfaI CTAG 6 cut(s) 63, 354, 437, 746, 1092, 1307
BfrI CTTAAG 1 cut(s) 517
BfuAI ACCTGC 1 cut(s) 116
BglII AGATCT 1 cut(s) 950
BisI GCNGC 7 cut(s) 174, 250, 756, 759, 873, 1083, 1161
BlsI GCNGC 7 cut(s) 175, 251, 757, 760, 874, 1084, 1162
Bme1390I CCNGG 1 cut(s) 616
Bme18I GGWCC 1 cut(s) 194
BmgT120I GGNCC 1 cut(s) 194
BmiI GGNNCC 1 cut(s) 915
BmrFI CCNGG 1 cut(s) 616
BmsI GCATC 6 cut(s) 262, 312, 316, 841, 1096, 1464
BpmI CTGGAG 2 cut(s) 276, 637
Bpu14I TTCGAA 2 cut(s) 165, 1422
BpuEI CTTGAG 2 cut(s) 1058, 1316
Bsa29I ATCGAT 1 cut(s) 967
BsaBI GATNNNNATC 1 cut(s) 276
BsaJI CCNNGG 2 cut(s) 441, 614
BsaWI WCCGGW 1 cut(s) 108
BsaXI ACNNNNNCTCC 2 cut(s) 323, 353
Bsc4I CCNNNNNNNGG 3 cut(s) 108, 289, 348
Bse1I ACTGG 6 cut(s) 160, 259, 599, 700, 836, 1517
Bse8I GATNNNNATC 1 cut(s) 276
BseBI CCWGG 1 cut(s) 616
BseCI ATCGAT 1 cut(s) 967
BseDI CCNNGG 2 cut(s) 441, 614
BseGI GGATG 4 cut(s) 301, 908, 1273, 1378
BseJI GATNNNNATC 1 cut(s) 276
BseLI CCNNNNNNNGG 3 cut(s) 108, 289, 348
BseMII CTCAG 1 cut(s) 1518
BseNI ACTGG 6 cut(s) 160, 259, 599, 700, 836, 1517
BseSI GKGCMC 1 cut(s) 843
BseXI GCAGC 7 cut(s) 160, 261, 767, 770, 859, 1094, 1147
BsgI GTGCAG 1 cut(s) 72
BshVI ATCGAT 1 cut(s) 967
BsiHKAI GWGCWC 2 cut(s) 116, 1275
BsiSI CCGG 2 cut(s) 109, 122
BslFI GGGAC 3 cut(s) 154, 221, 661
BslI CCNNNNNNNGG 3 cut(s) 108, 289, 348
BsmFI GGGAC 3 cut(s) 154, 221, 661
BsmI GAATGC 1 cut(s) 1084
Bsp119I TTCGAA 2 cut(s) 165, 1422
Bsp1286I GDGCHC 5 cut(s) 116, 615, 843, 1275, 1485
Bsp143I GATC 8 cut(s) 478, 597, 793, 913, 950, 964, 1279, 1365
BspACI CCGC 5 cut(s) 75, 247, 283, 938, 1044
BspCNI CTCAG 1 cut(s) 1517
BspDI ATCGAT 1 cut(s) 967
BspHI TCATGA 2 cut(s) 306, 1357
BspLI GGNNCC 1 cut(s) 915
BspMI ACCTGC 1 cut(s) 116
BspPI GGATC 5 cut(s) 486, 605, 908, 921, 1274
BspT104I TTCGAA 2 cut(s) 165, 1422
BspTI CTTAAG 1 cut(s) 517
BsrI ACTGG 6 cut(s) 160, 259, 599, 700, 836, 1517
BssECI CCNNGG 2 cut(s) 441, 614
BssMI GATC 8 cut(s) 478, 597, 793, 913, 950, 964, 1279, 1365
BssT1I CCWWGG 1 cut(s) 441
Bst2UI CCWGG 1 cut(s) 616
Bst4CI ACNGT 5 cut(s) 509, 825, 929, 1120, 1442
Bst6I CTCTTC 2 cut(s) 184, 473
BstAFI CTTAAG 1 cut(s) 517
BstBI TTCGAA 2 cut(s) 165, 1422
BstDEI CTNAG 2 cut(s) 377, 1504
BstF5I GGATG 4 cut(s) 301, 908, 1273, 1378
BstKTI GATC 8 cut(s) 481, 600, 796, 916, 953, 967, 1282, 1368
BstMBI GATC 8 cut(s) 478, 597, 793, 913, 950, 964, 1279, 1365
BstMWI GCNNNNNNNGC 7 cut(s) 152, 272, 519, 755, 881, 1052, 1061
BstNI CCWGG 1 cut(s) 616
BstSCI CCNGG 1 cut(s) 614
BstSLI GKGCMC 1 cut(s) 843
BstV1I GCAGC 7 cut(s) 160, 261, 767, 770, 859, 1094, 1147
BstX2I RGATCY 3 cut(s) 478, 913, 950
BstXI CCANNNNNNTGG 1 cut(s) 204
BstYI RGATCY 3 cut(s) 478, 913, 950
Bsu15I ATCGAT 1 cut(s) 967
BsuTUI ATCGAT 1 cut(s) 967
BtsCI GGATG 4 cut(s) 301, 908, 1273, 1378
BtsI GCAGTG 1 cut(s) 60
BtsIMutI CAGTG 7 cut(s) 60, 252, 693, 829, 1251, 1447, 1510
BveI ACCTGC 1 cut(s) 116
CaiI CAGNNNCTG 1 cut(s) 1109
CciI TCATGA 2 cut(s) 306, 1357
Cfr13I GGNCC 1 cut(s) 194
ClaI ATCGAT 1 cut(s) 967
Csp6I GTAC 1 cut(s) 1228
CviAII CATG 6 cut(s) 307, 348, 660, 863, 946, 1358
CviQI GTAC 1 cut(s) 1228
DdeI CTNAG 2 cut(s) 377, 1504
DpnI GATC 8 cut(s) 480, 599, 795, 915, 952, 966, 1281, 1367
DpnII GATC 8 cut(s) 478, 597, 793, 913, 950, 964, 1279, 1365
Eam1104I CTCTTC 2 cut(s) 184, 473
EarI CTCTTC 2 cut(s) 184, 473
Eco130I CCWWGG 1 cut(s) 441
Eco24I GRGCYC 2 cut(s) 615, 1485
Eco47I GGWCC 1 cut(s) 194
Eco57I CTGAAG 2 cut(s) 135, 1149
EcoRI GAATTC 1 cut(s) 1194
EcoRII CCWGG 1 cut(s) 614
EcoT14I CCWWGG 1 cut(s) 441
EcoT22I ATGCAT 1 cut(s) 277
EcoT38I GRGCYC 2 cut(s) 615, 1485
ErhI CCWWGG 1 cut(s) 441
FaeI CATG 6 cut(s) 310, 351, 663, 866, 949, 1361
FaqI GGGAC 3 cut(s) 154, 221, 661
FatI CATG 6 cut(s) 306, 347, 659, 862, 945, 1357
FauNDI CATATG 1 cut(s) 203
FbaI TGATCA 1 cut(s) 793
Fnu4HI GCNGC 7 cut(s) 174, 250, 756, 759, 873, 1083, 1161
FokI GGATG 4 cut(s) 308, 915, 1280, 1385
FriOI GRGCYC 2 cut(s) 615, 1485
Fsp4HI GCNGC 7 cut(s) 174, 250, 756, 759, 873, 1083, 1161
FspBI CTAG 6 cut(s) 63, 354, 437, 746, 1092, 1307
GluI GCNGC 7 cut(s) 174, 250, 756, 759, 873, 1083, 1161
GsuI CTGGAG 2 cut(s) 276, 637
HapII CCGG 2 cut(s) 109, 122
Hin1II CATG 6 cut(s) 310, 351, 663, 866, 949, 1361
HincII GTYRAC 1 cut(s) 1381
HindII GTYRAC 1 cut(s) 1381
HindIII AAGCTT 1 cut(s) 489
HinfI GANTC 2 cut(s) 336, 402
HpaI GTTAAC 1 cut(s) 1381
HpaII CCGG 2 cut(s) 109, 122
HphI GGTGA 4 cut(s) 272, 590, 941, 1310
Hpy166II GTNNAC 3 cut(s) 535, 981, 1381
Hpy188I TCNGA 6 cut(s) 673, 798, 850, 962, 997, 1168
Hpy8I GTNNAC 3 cut(s) 535, 981, 1381
Hpy99I CGWCG 1 cut(s) 95
HpyAV CCTTC 7 cut(s) 161, 392, 793, 1184, 1213, 1257, 1381
HpyCH4III ACNGT 5 cut(s) 509, 825, 929, 1120, 1442
HpyCH4IV ACGT 3 cut(s) 93, 650, 1383
HpyCH4V TGCA 8 cut(s) 29, 53, 176, 275, 656, 693, 1064, 1082
HpyF10VI GCNNNNNNNGC 7 cut(s) 152, 272, 519, 755, 881, 1052, 1061
HpyF3I CTNAG 2 cut(s) 377, 1504
HpySE526I ACGT 3 cut(s) 93, 650, 1383
Hsp92II CATG 6 cut(s) 310, 351, 663, 866, 949, 1361
Ksp22I TGATCA 1 cut(s) 793
KspAI GTTAAC 1 cut(s) 1381
Kzo9I GATC 8 cut(s) 478, 597, 793, 913, 950, 964, 1279, 1365
LmnI GCTCC 2 cut(s) 111, 618
Lsp1109I GCAGC 7 cut(s) 160, 261, 767, 770, 859, 1094, 1147
LweI GCATC 6 cut(s) 262, 312, 316, 841, 1096, 1464
MaeI CTAG 6 cut(s) 63, 354, 437, 746, 1092, 1307
MaeII ACGT 3 cut(s) 93, 650, 1383
MaeIII GTNAC 4 cut(s) 360, 460, 825, 1436
MalI GATC 8 cut(s) 480, 599, 795, 915, 952, 966, 1281, 1367
MboI GATC 8 cut(s) 478, 597, 793, 913, 950, 964, 1279, 1365
MboII GAAGA 8 cut(s) 141, 194, 201, 460, 473, 509, 878, 1346
MflI RGATCY 3 cut(s) 478, 913, 950
MhlI GDGCHC 5 cut(s) 116, 615, 843, 1275, 1485
MmeI TCCRAC 1 cut(s) 940
MnlI CCTC 7 cut(s) 185, 286, 374, 431, 534, 1077, 1291
Mph1103I ATGCAT 1 cut(s) 277
MroXI GAANNNNTTC 1 cut(s) 1194
MseI TTAA 6 cut(s) 518, 588, 605, 920, 1004, 1380
MslI CAYNNNNRTG 1 cut(s) 664
MspCI CTTAAG 1 cut(s) 517
MspI CCGG 2 cut(s) 109, 122
MspR9I CCNGG 1 cut(s) 616
Mva1269I GAATGC 1 cut(s) 1084
MvaI CCWGG 1 cut(s) 616
MwoI GCNNNNNNNGC 7 cut(s) 152, 272, 519, 755, 881, 1052, 1061
NdeI CATATG 1 cut(s) 203
NdeII GATC 8 cut(s) 478, 597, 793, 913, 950, 964, 1279, 1365
NlaIII CATG 6 cut(s) 310, 351, 663, 866, 949, 1361
NlaIV GGNNCC 1 cut(s) 915
NmuCI GTSAC 2 cut(s) 460, 825
NsiI ATGCAT 1 cut(s) 277
NspV TTCGAA 2 cut(s) 165, 1422
PagI TCATGA 2 cut(s) 306, 1357
PcsI WCGNNNNNNNCGW 1 cut(s) 759
PctI GAATGC 1 cut(s) 1084
PdmI GAANNNNTTC 1 cut(s) 1194
PfeI GAWTC 2 cut(s) 336, 402
PflMI CCANNNNNTGG 1 cut(s) 348
PkrI GCNGC 7 cut(s) 175, 251, 757, 760, 874, 1084, 1162
Psp6I CCWGG 1 cut(s) 614
PspGI CCWGG 1 cut(s) 614
PspN4I GGNNCC 1 cut(s) 915
PspPI GGNCC 1 cut(s) 194
PstNI CAGNNNCTG 1 cut(s) 1109
PsuI RGATCY 3 cut(s) 478, 913, 950
RsaI GTAC 1 cut(s) 1229
RsaNI GTAC 1 cut(s) 1228
RseI CAYNNNNRTG 1 cut(s) 664
SaqAI TTAA 6 cut(s) 518, 588, 605, 920, 1004, 1380
SatI GCNGC 7 cut(s) 174, 250, 756, 759, 873, 1083, 1161
Sau3AI GATC 8 cut(s) 478, 597, 793, 913, 950, 964, 1279, 1365
Sau96I GGNCC 1 cut(s) 194
ScrFI CCNGG 1 cut(s) 616
SduI GDGCHC 5 cut(s) 116, 615, 843, 1275, 1485
SfaNI GCATC 6 cut(s) 262, 312, 316, 841, 1096, 1464
SfuI TTCGAA 2 cut(s) 165, 1422
SinI GGWCC 1 cut(s) 194
SmiMI CAYNNNNRTG 1 cut(s) 664
SmlI CTYRAG 3 cut(s) 517, 1073, 1295
SmoI CTYRAG 3 cut(s) 517, 1073, 1295
SpeI ACTAGT 1 cut(s) 62
SsiI CCGC 5 cut(s) 75, 247, 283, 938, 1044
SspI AATATT 1 cut(s) 410
SspMI CTAG 6 cut(s) 63, 354, 437, 746, 1092, 1307
StyD4I CCNGG 1 cut(s) 614
StyI CCWWGG 1 cut(s) 441
TaaI ACNGT 5 cut(s) 509, 825, 929, 1120, 1442
TaiI ACGT 3 cut(s) 96, 653, 1386
TaqI TCGA 5 cut(s) 165, 967, 1198, 1339, 1422
TatI WGTACW 1 cut(s) 1227
TfiI GAWTC 2 cut(s) 336, 402
Tru1I TTAA 6 cut(s) 518, 588, 605, 920, 1004, 1380
Tru9I TTAA 6 cut(s) 518, 588, 605, 920, 1004, 1380
TscAI CASTG 7 cut(s) 60, 259, 700, 836, 1258, 1447, 1517
TseFI GTSAC 2 cut(s) 460, 825
TseI GCWGC 7 cut(s) 173, 249, 755, 758, 872, 1082, 1160
Tsp45I GTSAC 2 cut(s) 460, 825
TspDTI ATGAA 7 cut(s) 121, 323, 516, 879, 1002, 1346, 1374
TspRI CASTG 7 cut(s) 60, 259, 700, 836, 1258, 1447, 1517
Van91I CCANNNNNTGG 1 cut(s) 348
Vha464I CTTAAG 1 cut(s) 517
VpaK11BI GGWCC 1 cut(s) 194
XapI RAATTY 5 cut(s) 225, 572, 703, 1194, 1522
XbaI TCTAGA 1 cut(s) 353
XmnI GAANNNNTTC 1 cut(s) 1194
XspI CTAG 6 cut(s) 63, 354, 437, 746, 1092, 1307
Zsp2I ATGCAT 1 cut(s) 277
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.