MD15G1442000.v1.1

beta-glucosidase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr15
OG0000117
Physical Location & Seq
Reverse (-)
54185498 .. 54189171
3674 bp
Loading structure...
UTR
Exon/CDS
Intron
MD15G1442000.v1.1.491

Sequence Viewer

Length: 1626 bp
ATGATTAAGTTAGGTTTCATCCTCCTGCTCGTTCTTGGCTGTGCAGTCACAATTAGTGCCAAGCCAGAGCCTCCCAAACCTAATGCTTCATCTGATGCTTATCAGAACTTCAACCGGACCAGTTTTCCGCCCGATTTCATGTTCGGGGCTGCCGGAGCGGCCTACCAGTTTGAAGGTGCTGCAAAGGAAGGGGGTAGAGGACCATCTGTTTGGGATACATTCACTCACAAATATCCAGATAAAATAAAGGACCGCAGCAATGGAGATGTGGCTGTTGATTCATATCATCGCATTAAGGAAGATGTTGGGATTCTCAAGGATATGGGTTGGGATTTTTACAGATTTTCAATCTCATGGTCTCGCTTGTTACCTAATGGAAAGCTAAGTGGGGGAGTGAACATGGAAGGACTAAACTATTACAAAAACCTCCTCAATGAGCTTCAAGCCAATGGCATAAAACCCTTCGTGACACTCTTTCATTGGGATTTTCCCCAGGCTTTGGAAGATGAGTACCGTGGCTTCTTAAGCCCTAACAGTGTGAGTCATTTTCAGGACTATGCAGACCTCTGCTTTAAAGAATTTGGTGACAAAGTAAAGCACTGGATCACGTTAAATGAGCCTCAAACTTATAGCGTCCAAGGTTATACAGTCGGAACATTTGCTCCAGGCCGATGCTCTAACCATACAAAATGCACAGAGGGTGGAAATTCGGCGACGGAGCCATATTTGGCAGCGTATCACCAACTTCTAGCTCATGCAACTGCTGTAAAAGTGTATAGAGACAAGTATCAGGCTTCGCAAAAGGGCGTGATCGGAATAGCACTTAACTCCGGTTGGTCTGTACCCCTTTCTGATTCTATGGAGGATAAAGGTGCTGCAATGCGAGCACTTGATTTTTCGTATGGCTGGTTTATGGATCCGTTGACAAGGGGTAAATATCCAAAGCATATGGTAAAGCTAGTTGGAAGTCGAATGCCCAAGTTCACCGAAGAGCAATCCAGTCTGCTAAAAGGTTCATATGACTTTATTGGATTGAATTACTACTCATCGTCATATGCAAAAGATGTTCCTGTTAAGGCTGCACAGCTAAGCCAGTCAACCGACGCCAAGGTCGAATCATTAAACAACCGCAATGGAGTCCTCATTGGTCCAATGGCTGCATCAAATTGGCTATATATTTATCCACAAGGGCTTCTAGAACTATTAAGTTACACAAAGAGAAAGTATAAAAATCCAGTTATTTACATCACAGAAAATGGAGTTGACGAGGCAAATGATCCCAAATTATCACTTGAGGAAGCTCTCATCGACAAAGAAAGAATTAAATATTACGATGCGCATCTTTATTACGTTCAAGAAGCCATTAAGAAGGGCATTAATGTGAAAGGGTTCTTTGCGTGGTCTTTGCTCGACAATTTTGAATGGGCTGACGGTTACACTGTGAGATTCGGTCTCATTTATGTGGATTACAAAAACGGACTCAAAAGACATTACAAACTCTCAGCTCGTTGGTGGAAGAATCTTCTTTCCCGCTCGGGTCCTAAACATAATTCCTCAAAGAGCAACACCAAACCCTCAGGGGGCACCAGTTCAAAACCTAAATCCTCAAAGGGCGACATCCTTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_1

Protein Analysis

542

Amino Acids

60.81

Weight (kDa)

9.03

Isoelectric Point (pI)

27.77

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 40 - 512 3e-159 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1109
Acc16I TGCGCA 1 cut(s) 1338
AccB1I GGYRCC 1 cut(s) 1583
AccB7I CCANNNNNTGG 1 cut(s) 499
AccBSI CCGCTC 2 cut(s) 158, 1533
AciI CCGC 5 cut(s) 128, 158, 253, 1129, 1531
AclWI GGATC 4 cut(s) 611, 911, 924, 1271
AcsI RAATTY 2 cut(s) 578, 706
AcyI GRCGYC 1 cut(s) 1104
AfaI GTAC 2 cut(s) 512, 843
AfiI CCNNNNNNNGG 2 cut(s) 499, 1580
AflII CTTAAG 1 cut(s) 523
AgsI TTSAA 8 cut(s) 112, 173, 348, 443, 1036, 1355, 1421, 1593
AjnI CCWGG 2 cut(s) 492, 664
AloI GAACNNNNNNTCC 2 cut(s) 646, 678
AluBI AGCT 7 cut(s) 382, 439, 752, 958, 1087, 1301, 1505
AluI AGCT 7 cut(s) 382, 439, 752, 958, 1087, 1301, 1505
Alw21I GWGCWC 1 cut(s) 889
Alw26I GTCTC 3 cut(s) 363, 774, 1457
AlwI GGATC 4 cut(s) 611, 911, 924, 1271
Ama87I CYCGRG 1 cut(s) 1534
AoxI GGCC 2 cut(s) 159, 667
ApeKI GCWGC 7 cut(s) 149, 179, 255, 731, 875, 1079, 1157
ApoI RAATTY 2 cut(s) 578, 706
ArsI GACNNNNNNTTYG 2 cut(s) 192, 224
AseI ATTAAT 1 cut(s) 1377
Asp700I GAANNNNTTC 1 cut(s) 1388
AspLEI GCGC 1 cut(s) 1339
AspS9I GGNCC 5 cut(s) 117, 200, 250, 1148, 1538
AsuHPI GGTGA 3 cut(s) 596, 731, 976
AvaI CYCGRG 1 cut(s) 1534
AvaII GGWCC 5 cut(s) 117, 200, 250, 1148, 1538
AxyI CCTNAGG 1 cut(s) 1576
BaeGI GKGCMC 1 cut(s) 1586
BamHI GGATCC 1 cut(s) 916
BanI GGYRCC 1 cut(s) 1583
BarI GAAGNNNNNNTAC 2 cut(s) 503, 535
Bbv12I GWGCWC 1 cut(s) 889
BbvI GCAGC 7 cut(s) 136, 166, 267, 743, 862, 1066, 1144
BccI CCATC 1 cut(s) 211
BciT130I CCWGG 2 cut(s) 494, 666
BciVI GTATCC 1 cut(s) 208
BcoDI GTCTC 3 cut(s) 363, 774, 1457
BfaI CTAG 3 cut(s) 749, 959, 1196
BfrI CTTAAG 1 cut(s) 523
BfuI GTATCC 1 cut(s) 208
BglI GCCNNNNNGGC 1 cut(s) 158
BisI GCNGC 8 cut(s) 150, 159, 180, 256, 732, 876, 1080, 1158
BlpI GCTNAGC 1 cut(s) 1088
BlsI GCNGC 8 cut(s) 151, 160, 181, 257, 733, 877, 1081, 1159
Bme1390I CCNGG 2 cut(s) 494, 666
Bme18I GGWCC 5 cut(s) 117, 200, 250, 1148, 1538
BmeT110I CYCGRG 1 cut(s) 1534
BmgT120I GGNCC 5 cut(s) 117, 200, 250, 1148, 1538
BmiI GGNNCC 4 cut(s) 720, 918, 1539, 1585
BmrFI CCNGG 2 cut(s) 494, 666
BmsI GCATC 5 cut(s) 85, 662, 1169, 1324, 1348
BpmI CTGGAG 1 cut(s) 648
Bpu1102I GCTNAGC 1 cut(s) 1088
BpuEI CTTGAG 2 cut(s) 299, 1313
BsaBI GATNNNNATC 3 cut(s) 99, 282, 1338
BsaHI GRCGYC 1 cut(s) 1104
BsaI GGTCTC 2 cut(s) 363, 1457
BsaJI CCNNGG 4 cut(s) 492, 514, 637, 1107
BsaWI WCCGGW 2 cut(s) 114, 830
BsaXI ACNNNNNCTCC 2 cut(s) 646, 676
Bsc4I CCNNNNNNNGG 2 cut(s) 499, 1580
Bse1I ACTGG 7 cut(s) 120, 166, 605, 999, 1093, 1235, 1587
Bse21I CCTNAGG 1 cut(s) 1576
Bse3DI GCAATG 3 cut(s) 265, 885, 1138
Bse8I GATNNNNATC 3 cut(s) 99, 282, 1338
BseBI CCWGG 2 cut(s) 494, 666
BseDI CCNNGG 4 cut(s) 492, 514, 637, 1107
BseGI GGATG 2 cut(s) 18, 1617
BseJI GATNNNNATC 3 cut(s) 99, 282, 1338
BseLI CCNNNNNNNGG 2 cut(s) 499, 1580
BseMI GCAATG 3 cut(s) 265, 885, 1138
BseMII CTCAG 2 cut(s) 1515, 1590
BseNI ACTGG 7 cut(s) 120, 166, 605, 999, 1093, 1235, 1587
BseRI GAGGAG 1 cut(s) 419
BseSI GKGCMC 1 cut(s) 1586
BseXI GCAGC 7 cut(s) 136, 166, 267, 743, 862, 1066, 1144
BsgI GTGCAG 2 cut(s) 63, 1065
BshFI GGCC 2 cut(s) 161, 669
BshNI GGYRCC 1 cut(s) 1583
BsiHKAI GWGCWC 1 cut(s) 889
BsiHKCI CYCGRG 1 cut(s) 1534
BsiSI CCGG 3 cut(s) 115, 153, 831
BslI CCNNNNNNNGG 2 cut(s) 499, 1580
BsmAI GTCTC 3 cut(s) 363, 774, 1457
BsmI GAATGC 1 cut(s) 978
BsnI GGCC 2 cut(s) 161, 669
Bso31I GGTCTC 2 cut(s) 363, 1457
BsoBI CYCGRG 1 cut(s) 1534
Bsp1286I GDGCHC 2 cut(s) 889, 1586
Bsp143I GATC 4 cut(s) 603, 810, 916, 1276
Bsp1720I GCTNAGC 1 cut(s) 1088
BspACI CCGC 5 cut(s) 128, 158, 253, 1129, 1531
BspANI GGCC 2 cut(s) 161, 669
BspCNI CTCAG 2 cut(s) 1514, 1589
BspLI GGNNCC 4 cut(s) 720, 918, 1539, 1585
BspPI GGATC 4 cut(s) 611, 911, 924, 1271
BspQI GCTCTTC 1 cut(s) 984
BspT107I GGYRCC 1 cut(s) 1583
BspTI CTTAAG 1 cut(s) 523
BspTNI GGTCTC 2 cut(s) 363, 1457
BsrBI CCGCTC 2 cut(s) 158, 1533
BsrDI GCAATG 3 cut(s) 265, 885, 1138
BsrI ACTGG 7 cut(s) 120, 166, 605, 999, 1093, 1235, 1587
BssECI CCNNGG 4 cut(s) 492, 514, 637, 1107
BssMI GATC 4 cut(s) 603, 810, 916, 1276
BssNI GRCGYC 1 cut(s) 1104
BssT1I CCWWGG 2 cut(s) 637, 1107
Bst2UI CCWGG 2 cut(s) 494, 666
Bst4CI ACNGT 5 cut(s) 515, 536, 649, 1433, 1441
Bst6I CTCTTC 1 cut(s) 984
BstACI GRCGYC 1 cut(s) 1104
BstAFI CTTAAG 1 cut(s) 523
BstC8I GCNNGC 1 cut(s) 885
BstDEI CTNAG 4 cut(s) 383, 1088, 1501, 1576
BstDSI CCRYGG 1 cut(s) 514
BstF5I GGATG 2 cut(s) 18, 1617
BstHHI GCGC 1 cut(s) 1339
BstKTI GATC 4 cut(s) 606, 813, 919, 1279
BstMAI GTCTC 3 cut(s) 363, 774, 1457
BstMBI GATC 4 cut(s) 603, 810, 916, 1276
BstMWI GCNNNNNNNGC 4 cut(s) 155, 158, 525, 884
BstNI CCWGG 2 cut(s) 494, 666
BstSCI CCNGG 2 cut(s) 492, 664
BstSLI GKGCMC 1 cut(s) 1586
BstV1I GCAGC 7 cut(s) 136, 166, 267, 743, 862, 1066, 1144
BstX2I RGATCY 1 cut(s) 916
BstXI CCANNNNNNTGG 1 cut(s) 210
BstYI RGATCY 1 cut(s) 916
Bsu36I CCTNAGG 1 cut(s) 1576
BsuI GTATCC 1 cut(s) 208
BsuRI GGCC 2 cut(s) 161, 669
BtgI CCRYGG 1 cut(s) 514
BtgZI GCGATG 1 cut(s) 272
BtsCI GGATG 2 cut(s) 18, 1617
BtsIMutI CAGTG 3 cut(s) 541, 598, 1437
Cac8I GCNNGC 1 cut(s) 885
CfoI GCGC 1 cut(s) 1339
Cfr13I GGNCC 5 cut(s) 117, 200, 250, 1148, 1538
CseI GACGC 2 cut(s) 622, 1112
Csp6I GTAC 2 cut(s) 511, 842
CviAII CATG 4 cut(s) 139, 354, 400, 755
CviQI GTAC 2 cut(s) 511, 842
DdeI CTNAG 4 cut(s) 383, 1088, 1501, 1576
DpnI GATC 4 cut(s) 605, 812, 918, 1278
DpnII GATC 4 cut(s) 603, 810, 916, 1276
DraI TTTAAA 1 cut(s) 574
DrdI GACNNNNNNGTC 1 cut(s) 1109
DseDI GACNNNNNNGTC 1 cut(s) 1109
Eam1104I CTCTTC 1 cut(s) 984
EarI CTCTTC 1 cut(s) 984
EciI GGCGGA 1 cut(s) 117
Eco130I CCWWGG 2 cut(s) 637, 1107
Eco31I GGTCTC 2 cut(s) 363, 1457
Eco47I GGWCC 5 cut(s) 117, 200, 250, 1148, 1538
Eco81I CCTNAGG 1 cut(s) 1576
Eco88I CYCGRG 1 cut(s) 1534
EcoO109I RGGNCCY 1 cut(s) 1538
EcoRII CCWGG 2 cut(s) 492, 664
EcoT14I CCWWGG 2 cut(s) 637, 1107
ErhI CCWWGG 2 cut(s) 637, 1107
FaeI CATG 4 cut(s) 142, 357, 403, 758
FatI CATG 4 cut(s) 138, 353, 399, 754
FauI CCCGC 1 cut(s) 1538
FauNDI CATATG 3 cut(s) 948, 1018, 1054
Fnu4HI GCNGC 8 cut(s) 150, 159, 180, 256, 732, 876, 1080, 1158
FokI GGATG 2 cut(s) 5, 1604
Fsp4HI GCNGC 8 cut(s) 150, 159, 180, 256, 732, 876, 1080, 1158
FspAI RTGCGCAY 1 cut(s) 1338
FspBI CTAG 3 cut(s) 749, 959, 1196
FspI TGCGCA 1 cut(s) 1338
GlaI GCGC 1 cut(s) 1338
GluI GCNGC 8 cut(s) 150, 159, 180, 256, 732, 876, 1080, 1158
GsuI CTGGAG 1 cut(s) 648
HaeIII GGCC 2 cut(s) 161, 669
HapII CCGG 3 cut(s) 115, 153, 831
HgaI GACGC 2 cut(s) 622, 1112
HhaI GCGC 1 cut(s) 1339
Hin1I GRCGYC 1 cut(s) 1104
Hin1II CATG 4 cut(s) 142, 357, 403, 758
Hin6I GCGC 1 cut(s) 1337
HinP1I GCGC 1 cut(s) 1337
HincII GTYRAC 3 cut(s) 924, 1098, 1264
HindII GTYRAC 3 cut(s) 924, 1098, 1264
HinfI GANTC 9 cut(s) 278, 310, 541, 854, 1115, 1137, 1446, 1479, 1519
HpaII CCGG 3 cut(s) 115, 153, 831
HphI GGTGA 3 cut(s) 596, 731, 976
Hpy166II GTNNAC 5 cut(s) 397, 924, 984, 1098, 1264
Hpy188I TCNGA 5 cut(s) 94, 105, 653, 815, 853
Hpy188III TCNNGA 5 cut(s) 236, 466, 551, 1196, 1355
Hpy8I GTNNAC 5 cut(s) 397, 924, 984, 1098, 1264
Hpy99I CGWCG 2 cut(s) 718, 1106
HpyAV CCTTC 5 cut(s) 167, 182, 398, 472, 1363
HpyCH4III ACNGT 5 cut(s) 515, 536, 649, 1433, 1441
HpyCH4IV ACGT 2 cut(s) 608, 1350
HpyCH4V TGCA 9 cut(s) 44, 182, 560, 693, 758, 878, 1058, 1082, 1160
HpyF10VI GCNNNNNNNGC 4 cut(s) 155, 158, 525, 884
HpyF3I CTNAG 4 cut(s) 383, 1088, 1501, 1576
HpySE526I ACGT 2 cut(s) 608, 1350
Hsp92I GRCGYC 1 cut(s) 1104
Hsp92II CATG 4 cut(s) 142, 357, 403, 758
HspAI GCGC 1 cut(s) 1337
Kzo9I GATC 4 cut(s) 603, 810, 916, 1276
LguI GCTCTTC 1 cut(s) 984
LmnI GCTCC 3 cut(s) 155, 667, 718
Lsp1109I GCAGC 7 cut(s) 136, 166, 267, 743, 862, 1066, 1144
LweI GCATC 5 cut(s) 85, 662, 1169, 1324, 1348
MaeI CTAG 3 cut(s) 749, 959, 1196
MaeII ACGT 2 cut(s) 608, 1350
MaeIII GTNAC 6 cut(s) 46, 366, 466, 584, 1208, 1433
MalI GATC 4 cut(s) 605, 812, 918, 1278
MbiI CCGCTC 2 cut(s) 158, 1533
MboI GATC 4 cut(s) 603, 810, 916, 1276
MboII GAAGA 5 cut(s) 311, 515, 1001, 1514, 1528
MflI RGATCY 1 cut(s) 916
MhlI GDGCHC 2 cut(s) 889, 1586
MluCI AATT 9 cut(s) 51, 578, 706, 1036, 1165, 1283, 1320, 1414, 1549
MlyI GAGTC 3 cut(s) 550, 1146, 1473
MmeI TCCRAC 2 cut(s) 631, 943
MroXI GAANNNNTTC 1 cut(s) 1388
MslI CAYNNNNRTG 2 cut(s) 1379, 1460
MspCI CTTAAG 1 cut(s) 523
MspI CCGG 3 cut(s) 115, 153, 831
MspR9I CCNGG 2 cut(s) 494, 666
Mva1269I GAATGC 1 cut(s) 978
MvaI CCWGG 2 cut(s) 494, 666
MwoI GCNNNNNNNGC 4 cut(s) 155, 158, 525, 884
NdeI CATATG 3 cut(s) 948, 1018, 1054
NdeII GATC 4 cut(s) 603, 810, 916, 1276
NlaIII CATG 4 cut(s) 142, 357, 403, 758
NlaIV GGNNCC 4 cut(s) 720, 918, 1539, 1585
NmuCI GTSAC 3 cut(s) 46, 466, 584
NsbI TGCGCA 1 cut(s) 1338
PciSI GCTCTTC 1 cut(s) 984
PcsI WCGNNNNNNNCGW 1 cut(s) 1110
PctI GAATGC 1 cut(s) 978
PdmI GAANNNNTTC 1 cut(s) 1388
PfeI GAWTC 6 cut(s) 278, 310, 854, 1115, 1446, 1519
PflMI CCANNNNNTGG 1 cut(s) 499
PkrI GCNGC 8 cut(s) 151, 160, 181, 257, 733, 877, 1081, 1159
PleI GAGTC 3 cut(s) 549, 1145, 1473
PpsI GAGTC 3 cut(s) 549, 1145, 1473
PpuMI RGGWCCY 1 cut(s) 1538
PshBI ATTAAT 1 cut(s) 1377
Psp5II RGGWCCY 1 cut(s) 1538
Psp6I CCWGG 2 cut(s) 492, 664
PspGI CCWGG 2 cut(s) 492, 664
PspN4I GGNNCC 4 cut(s) 720, 918, 1539, 1585
PspPI GGNCC 5 cut(s) 117, 200, 250, 1148, 1538
PspPPI RGGWCCY 1 cut(s) 1538
PsuI RGATCY 1 cut(s) 916
RsaI GTAC 2 cut(s) 512, 843
RsaNI GTAC 2 cut(s) 511, 842
RseI CAYNNNNRTG 2 cut(s) 1379, 1460
SapI GCTCTTC 1 cut(s) 984
SatI GCNGC 8 cut(s) 150, 159, 180, 256, 732, 876, 1080, 1158
Sau3AI GATC 4 cut(s) 603, 810, 916, 1276
Sau96I GGNCC 5 cut(s) 117, 200, 250, 1148, 1538
SchI GAGTC 3 cut(s) 550, 1146, 1473
ScrFI CCNGG 2 cut(s) 494, 666
SduI GDGCHC 2 cut(s) 889, 1586
SfaNI GCATC 5 cut(s) 85, 662, 1169, 1324, 1348
SinI GGWCC 5 cut(s) 117, 200, 250, 1148, 1538
SmiMI CAYNNNNRTG 2 cut(s) 1379, 1460
SmlI CTYRAG 3 cut(s) 314, 523, 1292
SmoI CTYRAG 3 cut(s) 314, 523, 1292
Sse9I AATT 9 cut(s) 51, 578, 706, 1036, 1165, 1283, 1320, 1414, 1549
SsiI CCGC 5 cut(s) 128, 158, 253, 1129, 1531
SspI AATATT 1 cut(s) 1328
SspMI CTAG 3 cut(s) 749, 959, 1196
StyD4I CCNGG 2 cut(s) 492, 664
StyI CCWWGG 2 cut(s) 637, 1107
TaaI ACNGT 5 cut(s) 515, 536, 649, 1433, 1441
TaiI ACGT 2 cut(s) 611, 1353
TaqI TCGA 4 cut(s) 970, 1113, 1308, 1410
TaqII GACCGA 1 cut(s) 1439
TasI AATT 9 cut(s) 51, 578, 706, 1036, 1165, 1283, 1320, 1414, 1549
TauI GCSGC 1 cut(s) 161
TfiI GAWTC 6 cut(s) 278, 310, 854, 1115, 1446, 1519
TscAI CASTG 3 cut(s) 541, 605, 1444
TseFI GTSAC 3 cut(s) 46, 466, 584
TseI GCWGC 7 cut(s) 149, 179, 255, 731, 875, 1079, 1157
Tsp45I GTSAC 3 cut(s) 46, 466, 584
TspDTI ATGAA 6 cut(s) 7, 78, 127, 270, 467, 1005
TspGWI ACGGA 3 cut(s) 731, 909, 1491
TspRI CASTG 3 cut(s) 541, 605, 1444
Van91I CCANNNNNTGG 1 cut(s) 499
Vha464I CTTAAG 1 cut(s) 523
VpaK11BI GGWCC 5 cut(s) 117, 200, 250, 1148, 1538
VspI ATTAAT 1 cut(s) 1377
XapI RAATTY 2 cut(s) 578, 706
XbaI TCTAGA 1 cut(s) 1195
XmnI GAANNNNTTC 1 cut(s) 1388
XspI CTAG 3 cut(s) 749, 959, 1196
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.