Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000117

Physical Location & Seq

Genomic Coordinates Forward (+)

366640 .. 375109

Gene Structure 8470 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00000290.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1572 bp

ATGGCGTCCATTTCCAGAGTCTCTTCTTTTCTTAATGTTATTACTATAATCCTCATATTAATTCCTTTTGCCTCGTTAGTGAGAGGTAGTACTAGTGATGATCTGAGCAGCGATCGCTATGCAACTGCTTTTCTCAACCGGACCAGTTTTCCAGCTGGTTTTGTATTCGGCACAGCTTCATCAGCTTACCAGTATGAAGGTGCTGCAAATGAAAGTGGTAGAGGACCAAGTATATGGGATACTTTCACCCACAAATATCCAGGTAAGATTACAGATGGTAGCAATGGAGATGTTGCAATAGATTCATATCATCGCTATAAGGAAGATGTGGGGATTATGAAGGAAATGGGTTTGGATGTTTACAGATTTTCTATCTCATGGTCTAGAGTACTACCAAAGGGGAAAATAAGTGGTGGTGTGAACAAGGAAGGGATAGAATACTACAACAACCTTATCAATGAACTCCTTGCCAATGGTATAAAGCCTTTTGTGACACTCTTCCACTGGGATCTTCCCCAAACCCTGCAAGACGAGCATGGCGGCTTCCTAAGTCCCCATGTTGTGAAGCATTTTGAGGCCTATGCGGAACTTTGTTATAAGGAATTTGGTGATCGGGTGAAGCACTGGATCACATTCAATGAGCCAATTGCCCTCGCTGTGGCTGGTTACGGACTCAGGGCATTGGCACCAGGACGATGTTCCACTTGGATAAACCCCAACTGCACTGGAGGGAATTCAGCGACGGAGCCATATCTGGTCACACATTACCAACTCCTTGCTCATGCAGCTGCAGTTAGCTTGTATAAGAAACATTATCAGGAGTCCCAAAAAGGACTGATGGGGATCACGCTGGTGGCAGAATGGTTGATACCAAATTCTACGGCAGGGCACGACCAAGTTGCGGCATTTAGAGCCCTAGATTTTATGTTTGGATGGTATATGGACCCTTTGACAAATGGTGACTACCCTAAGAGCATGAAATCTCTCGTCGGAGATCGATTGCCTAAGTTCAAGAAAGAGCAATCCAAATTGCTGAAAGGGTCGTTTGACTTTATCGGATTGAACTATTACACTACTAGCTACGTATCCGACGCACCTCAACTAGTGAAAGTCGCCAATGCAAGCTACACGACAGACTCTCTTGCTACTATGTCACCCCTTCGTAGTGGAATCCCCATTGGTCCAAAGGCTGCCTCAGAGGGCCTCTATATTTATCCGAGAGGCATCAGGGATATTTTGCTCTACACAAAGAAAAAGTATAACAATCCGCTTATTTACATTACAGAGAATGGCGTTGATGAGTTTAATGATCCCAAGTTAACACTTGAGGAAGCCCTTGCTGACAACCAAAGAATTGACTACCACTTTCGCCATCTCTATTACCTCCGAGAATCGATCAAAGATGGTGTTAATGTGAAGGGATACTTTGCATGGTCATTATTGGACAACTTTGAATGGACATTAGGTTACACCGTTCGATTTGGCATCAACTATGTCGATTATAAAGATGGGCTTAAAAGATACCCCAAACACTCAGCATTATGGTTCAAGAATTTCCTCAAAAAGTACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004338 GO:0004553 GO:0004565 GO:0006082 GO:0006790 GO:0006807 GO:0006950 GO:0006970 GO:0008150 GO:0008152 GO:0008422 GO:0009056 GO:0009628 GO:0009651 GO:0009719 GO:0009725 GO:0009987 GO:0010033 GO:0015925 GO:0015926 GO:0016143 GO:0016145 GO:0016787 GO:0016798 GO:0019137 GO:0019748 GO:0019757 GO:0019759 GO:0019760 GO:0019762 GO:0033907 GO:0042221 GO:0043436 GO:0044237 GO:0044248 GO:0044273 GO:0044281 GO:0047701 GO:0050896 GO:0071704 GO:0080083 GO:1901135 GO:1901136 GO:1901564 GO:1901565 GO:1901575 GO:1901657 GO:1901658

KEGG Pathways

Metabolic & Signaling

ko00380 ko00460 ko00500 ko00940 ko01100 ko01110 map00380 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_1

Protein Analysis

523

Amino Acids

59.03

Weight (kDa)

8.53

Isoelectric Point (pI)

25.28

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_1	PF00232	48 - 521	3.4e-160	Glycosyl hydrolase family 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca	FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica	MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica	Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis	pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis	RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata	RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora	Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa	Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha	Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana	Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

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Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	597, 1503
AccB1I	GGYRCC	1 cut(s)	685
AciI	CCGC	4 cut(s)	540, 584, 902, 1268
AclWI	GGATC	4 cut(s)	516, 635, 851, 1304
AcsI	RAATTY	4 cut(s)	602, 733, 874, 1552
AcyI	GRCGYC	1 cut(s)	5
AfaI	GTAC	3 cut(s)	91, 390, 1568
AfiI	CCNNNNNNNGG	2 cut(s)	658, 901
AgsI	TTSAA	5 cut(s)	637, 1012, 1063, 1454, 1549
AhlI	ACTAGT	2 cut(s)	92, 1102
AjnI	CCWGG	2 cut(s)	259, 688
AleI	CACNNNNGTG	1 cut(s)	851
AluBI	AGCT	7 cut(s)	155, 176, 185, 788, 798, 1080, 1125
AluI	AGCT	7 cut(s)	155, 176, 185, 788, 798, 1080, 1125
Alw26I	GTCTC	1 cut(s)	25
AlwI	GGATC	4 cut(s)	516, 635, 851, 1304
AoxI	GGCC	2 cut(s)	576, 1201
ApeKI	GCWGC	5 cut(s)	108, 203, 785, 788, 1190
ApoI	RAATTY	4 cut(s)	602, 733, 874, 1552
AseI	ATTAAT	1 cut(s)	59
AsiSI	GCGATCGC	1 cut(s)	115
AspS9I	GGNCC	5 cut(s)	141, 224, 943, 1181, 1201
AsuHPI	GGTGA	5 cut(s)	238, 620, 628, 971, 1146
AvaII	GGWCC	4 cut(s)	141, 224, 943, 1181
BaeGI	GKGCMC	1 cut(s)	891
BanI	GGYRCC	1 cut(s)	685
BanII	GRGCYC	1 cut(s)	916
BbvI	GCAGC	5 cut(s)	120, 190, 775, 797, 1177
BccI	CCATC	6 cut(s)	269, 832, 927, 1380, 1397, 1502
BceAI	ACGGC	1 cut(s)	897
BcgI	CGANNNNNNTGC	4 cut(s)	101, 135, 881, 915
BciT130I	CCWGG	2 cut(s)	261, 690
BciVI	GTATCC	3 cut(s)	232, 1096, 1415
BcoDI	GTCTC	1 cut(s)	25
BcuI	ACTAGT	2 cut(s)	92, 1102
BfaI	CTAG	5 cut(s)	93, 384, 917, 1077, 1103
BfmI	CTRYAG	1 cut(s)	789
BfuI	GTATCC	3 cut(s)	232, 1096, 1415
BisI	GCNGC	7 cut(s)	109, 204, 541, 786, 789, 903, 1191
BlsI	GCNGC	7 cut(s)	110, 205, 542, 787, 790, 904, 1192
BmcAI	AGTACT	3 cut(s)	91, 390, 1568
Bme1390I	CCNGG	2 cut(s)	261, 690
Bme18I	GGWCC	4 cut(s)	141, 224, 943, 1181
BmgT120I	GGNCC	5 cut(s)	141, 224, 943, 1181, 1201
BmiI	GGNNCC	3 cut(s)	687, 747, 945
BmrFI	CCNGG	2 cut(s)	261, 690
BmrI	ACTGGG	1 cut(s)	514
BmsI	GCATC	2 cut(s)	1233, 1494
BmuI	ACTGGG	1 cut(s)	514
BpmI	CTGGAG	1 cut(s)	747
BpuEI	CTTGAG	1 cut(s)	1346
Bsa29I	ATCGAT	2 cut(s)	997, 1394
BsaAI	YACGTR	1 cut(s)	1084
BsaBI	GATNNNNATC	2 cut(s)	306, 842
BsaHI	GRCGYC	1 cut(s)	5
BsaWI	WCCGGW	1 cut(s)	138
Bsc4I	CCNNNNNNNGG	2 cut(s)	658, 901
Bse1I	ACTGG	5 cut(s)	144, 190, 509, 629, 730
Bse3DI	GCAATG	1 cut(s)	289
Bse8I	GATNNNNATC	2 cut(s)	306, 842
BseBI	CCWGG	2 cut(s)	261, 690
BseCI	ATCGAT	2 cut(s)	997, 1394
BseGI	GGATG	2 cut(s)	361, 938
BseJI	GATNNNNATC	2 cut(s)	306, 842
BseLI	CCNNNNNNNGG	2 cut(s)	658, 901
BseMI	GCAATG	1 cut(s)	289
BseMII	CTCAG	4 cut(s)	95, 688, 1209, 1548
BseNI	ACTGG	5 cut(s)	144, 190, 509, 629, 730
BseSI	GKGCMC	1 cut(s)	891
BseXI	GCAGC	5 cut(s)	120, 190, 775, 797, 1177
BsgI	GTGCAG	1 cut(s)	706
Bsh1285I	CGRYCG	1 cut(s)	115
BshFI	GGCC	2 cut(s)	578, 1203
BshNI	GGYRCC	1 cut(s)	685
BshVI	ATCGAT	2 cut(s)	997, 1394
BsiEI	CGRYCG	1 cut(s)	115
BsiSI	CCGG	1 cut(s)	139
BslFI	GGGAC	2 cut(s)	537, 808
BslI	CCNNNNNNNGG	2 cut(s)	658, 901
BsmAI	GTCTC	1 cut(s)	25
BsmFI	GGGAC	2 cut(s)	537, 808
BsnI	GGCC	2 cut(s)	578, 1203
Bsp1286I	GDGCHC	2 cut(s)	891, 916
Bsp143I	GATC	9 cut(s)	100, 112, 508, 610, 627, 843, 994, 1309, 1395
BspACI	CCGC	4 cut(s)	540, 584, 902, 1268
BspANI	GGCC	2 cut(s)	578, 1203
BspCNI	CTCAG	4 cut(s)	96, 687, 1208, 1547
BspDI	ATCGAT	2 cut(s)	997, 1394
BspLI	GGNNCC	3 cut(s)	687, 747, 945
BspMAI	CTGCAG	1 cut(s)	793
BspPI	GGATC	4 cut(s)	516, 635, 851, 1304
BspT107I	GGYRCC	1 cut(s)	685
BsrDI	GCAATG	1 cut(s)	289
BsrI	ACTGG	5 cut(s)	144, 190, 509, 629, 730
BssMI	GATC	9 cut(s)	100, 112, 508, 610, 627, 843, 994, 1309, 1395
BssNI	GRCGYC	1 cut(s)	5
Bst2UI	CCWGG	2 cut(s)	261, 690
Bst4CI	ACNGT	1 cut(s)	1474
Bst6I	CTCTTC	2 cut(s)	28, 503
BstACI	GRCGYC	1 cut(s)	5
BstBAI	YACGTR	1 cut(s)	1084
BstC8I	GCNNGC	1 cut(s)	1123
BstDEI	CTNAG	7 cut(s)	104, 548, 674, 969, 1005, 1195, 1534
BstF5I	GGATG	2 cut(s)	361, 938
BstKTI	GATC	9 cut(s)	103, 115, 511, 613, 630, 846, 997, 1312, 1398
BstMAI	GTCTC	1 cut(s)	25
BstMBI	GATC	9 cut(s)	100, 112, 508, 610, 627, 843, 994, 1309, 1395
BstMCI	CGRYCG	1 cut(s)	115
BstMWI	GCNNNNNNNGC	5 cut(s)	114, 182, 532, 785, 911
BstNI	CCWGG	2 cut(s)	261, 690
BstSCI	CCNGG	2 cut(s)	259, 688
BstSFI	CTRYAG	1 cut(s)	789
BstSLI	GKGCMC	1 cut(s)	891
BstSNI	TACGTA	1 cut(s)	1084
BstV1I	GCAGC	5 cut(s)	120, 190, 775, 797, 1177
BstX2I	RGATCY	1 cut(s)	508
BstXI	CCANNNNNNTGG	1 cut(s)	234
BstYI	RGATCY	1 cut(s)	508
Bsu15I	ATCGAT	2 cut(s)	997, 1394
BsuI	GTATCC	3 cut(s)	232, 1096, 1415
BsuRI	GGCC	2 cut(s)	578, 1203
BsuTUI	ATCGAT	2 cut(s)	997, 1394
BtgZI	GCGATG	1 cut(s)	296
BtsCI	GGATG	2 cut(s)	361, 938
BtsIMutI	CAGTG	3 cut(s)	502, 622, 723
Cac8I	GCNNGC	1 cut(s)	1123
Cfr13I	GGNCC	5 cut(s)	141, 224, 943, 1181, 1201
ClaI	ATCGAT	2 cut(s)	997, 1394
CseI	GACGC	1 cut(s)	1100
Csp6I	GTAC	3 cut(s)	90, 389, 1567
CviAII	CATG	6 cut(s)	378, 536, 557, 782, 976, 1431
CviQI	GTAC	3 cut(s)	90, 389, 1567
DdeI	CTNAG	7 cut(s)	104, 548, 674, 969, 1005, 1195, 1534
DpnI	GATC	9 cut(s)	102, 114, 510, 612, 629, 845, 996, 1311, 1397
DpnII	GATC	9 cut(s)	100, 112, 508, 610, 627, 843, 994, 1309, 1395
Eam1104I	CTCTTC	2 cut(s)	28, 503
EarI	CTCTTC	2 cut(s)	28, 503
Eco105I	TACGTA	1 cut(s)	1084
Eco147I	AGGCCT	1 cut(s)	578
Eco24I	GRGCYC	1 cut(s)	916
Eco47I	GGWCC	4 cut(s)	141, 224, 943, 1181
EcoO109I	RGGNCCY	1 cut(s)	1201
EcoRI	GAATTC	1 cut(s)	733
EcoRII	CCWGG	2 cut(s)	259, 688
EcoT38I	GRGCYC	1 cut(s)	916
FaeI	CATG	6 cut(s)	381, 539, 560, 785, 979, 1434
FalI	AAGNNNNNCTT	4 cut(s)	1409, 1441, 1497, 1529
FaqI	GGGAC	2 cut(s)	537, 808
FatI	CATG	6 cut(s)	377, 535, 556, 781, 975, 1430
Fnu4HI	GCNGC	7 cut(s)	109, 204, 541, 786, 789, 903, 1191
FokI	GGATG	2 cut(s)	368, 945
FriOI	GRGCYC	1 cut(s)	916
Fsp4HI	GCNGC	7 cut(s)	109, 204, 541, 786, 789, 903, 1191
FspBI	CTAG	5 cut(s)	93, 384, 917, 1077, 1103
GluI	GCNGC	7 cut(s)	109, 204, 541, 786, 789, 903, 1191
GsuI	CTGGAG	1 cut(s)	747
HaeIII	GGCC	2 cut(s)	578, 1203
HapII	CCGG	1 cut(s)	139
HgaI	GACGC	1 cut(s)	1100
Hin1I	GRCGYC	1 cut(s)	5
Hin1II	CATG	6 cut(s)	381, 539, 560, 785, 979, 1434
HincII	GTYRAC	1 cut(s)	1320
HindII	GTYRAC	1 cut(s)	1320
HinfI	GANTC	7 cut(s)	18, 302, 672, 821, 1136, 1170, 1391
HpaI	GTTAAC	1 cut(s)	1320
HpaII	CCGG	1 cut(s)	139
HphI	GGTGA	5 cut(s)	238, 620, 628, 971, 1146
Hpy166II	GTNNAC	3 cut(s)	361, 421, 1320
Hpy188I	TCNGA	7 cut(s)	105, 992, 1058, 1090, 1198, 1218, 1388
Hpy188III	TCNNGA	5 cut(s)	15, 384, 818, 1012, 1549
Hpy8I	GTNNAC	3 cut(s)	361, 421, 1320
Hpy99I	CGWCG	3 cut(s)	745, 992, 1094
HpyAV	CCTTC	5 cut(s)	191, 334, 422, 1169, 1411
HpyCH4III	ACNGT	1 cut(s)	1474
HpyCH4IV	ACGT	1 cut(s)	1083
HpyCH4V	TGCA	9 cut(s)	122, 206, 296, 526, 723, 785, 791, 1121, 1430
HpyF10VI	GCNNNNNNNGC	5 cut(s)	114, 182, 532, 785, 911
HpyF3I	CTNAG	7 cut(s)	104, 548, 674, 969, 1005, 1195, 1534
HpySE526I	ACGT	1 cut(s)	1083
Hsp92I	GRCGYC	1 cut(s)	5
Hsp92II	CATG	6 cut(s)	381, 539, 560, 785, 979, 1434
KspAI	GTTAAC	1 cut(s)	1320
Kzo9I	GATC	9 cut(s)	100, 112, 508, 610, 627, 843, 994, 1309, 1395
LmnI	GCTCC	1 cut(s)	745
Lsp1109I	GCAGC	5 cut(s)	120, 190, 775, 797, 1177
LweI	GCATC	2 cut(s)	1233, 1494
MaeI	CTAG	5 cut(s)	93, 384, 917, 1077, 1103
MaeII	ACGT	1 cut(s)	1083
MaeIII	GTNAC	6 cut(s)	490, 665, 757, 959, 1152, 1466
MalI	GATC	9 cut(s)	102, 114, 510, 612, 629, 845, 996, 1311, 1397
MboI	GATC	9 cut(s)	100, 112, 508, 610, 627, 843, 994, 1309, 1395
MboII	GAAGA	4 cut(s)	15, 335, 490, 503
MfeI	CAATTG	1 cut(s)	645
MflI	RGATCY	1 cut(s)	508
MhlI	GDGCHC	2 cut(s)	891, 916
MluCI	AATT	8 cut(s)	60, 602, 645, 733, 874, 1028, 1353, 1552
MlyI	GAGTC	4 cut(s)	27, 666, 830, 1130
MmeI	TCCRAC	2 cut(s)	970, 1113
MseI	TTAA	6 cut(s)	33, 59, 1305, 1319, 1410, 1515
MslI	CAYNNNNRTG	1 cut(s)	851
MspA1I	CMGCKG	2 cut(s)	155, 788
MspI	CCGG	1 cut(s)	139
MspR9I	CCNGG	2 cut(s)	261, 690
MunI	CAATTG	1 cut(s)	645
MvaI	CCWGG	2 cut(s)	261, 690
MwoI	GCNNNNNNNGC	5 cut(s)	114, 182, 532, 785, 911
NdeII	GATC	9 cut(s)	100, 112, 508, 610, 627, 843, 994, 1309, 1395
NlaIII	CATG	6 cut(s)	381, 539, 560, 785, 979, 1434
NlaIV	GGNNCC	3 cut(s)	687, 747, 945
NmuCI	GTSAC	4 cut(s)	490, 757, 959, 1152
OliI	CACNNNNGTG	1 cut(s)	851
PceI	AGGCCT	1 cut(s)	578
PfeI	GAWTC	3 cut(s)	302, 1170, 1391
PkrI	GCNGC	7 cut(s)	110, 205, 542, 787, 790, 904, 1192
Ple19I	CGATCG	1 cut(s)	115
PleI	GAGTC	4 cut(s)	26, 666, 829, 1130
PpsI	GAGTC	4 cut(s)	26, 666, 829, 1130
Ppu21I	YACGTR	1 cut(s)	1084
PshBI	ATTAAT	1 cut(s)	59
PsiI	TTATAA	2 cut(s)	597, 1503
Psp6I	CCWGG	2 cut(s)	259, 688
PspGI	CCWGG	2 cut(s)	259, 688
PspN4I	GGNNCC	3 cut(s)	687, 747, 945
PspPI	GGNCC	5 cut(s)	141, 224, 943, 1181, 1201
PstI	CTGCAG	1 cut(s)	793
PsuI	RGATCY	1 cut(s)	508
PvuI	CGATCG	1 cut(s)	115
PvuII	CAGCTG	2 cut(s)	155, 788
RgaI	GCGATCGC	1 cut(s)	115
RsaI	GTAC	3 cut(s)	91, 390, 1568
RsaNI	GTAC	3 cut(s)	90, 389, 1567
RseI	CAYNNNNRTG	1 cut(s)	851
SaqAI	TTAA	6 cut(s)	33, 59, 1305, 1319, 1410, 1515
SatI	GCNGC	7 cut(s)	109, 204, 541, 786, 789, 903, 1191
Sau3AI	GATC	9 cut(s)	100, 112, 508, 610, 627, 843, 994, 1309, 1395
Sau96I	GGNCC	5 cut(s)	141, 224, 943, 1181, 1201
ScaI	AGTACT	3 cut(s)	91, 390, 1568
SchI	GAGTC	4 cut(s)	27, 666, 830, 1130
ScrFI	CCNGG	2 cut(s)	261, 690
SduI	GDGCHC	2 cut(s)	891, 916
SfaAI	GCGATCGC	1 cut(s)	115
SfaNI	GCATC	2 cut(s)	1233, 1494
SfcI	CTRYAG	1 cut(s)	789
SgfI	GCGATCGC	1 cut(s)	115
SinI	GGWCC	4 cut(s)	141, 224, 943, 1181
SmiMI	CAYNNNNRTG	1 cut(s)	851
SmlI	CTYRAG	1 cut(s)	1325
SmoI	CTYRAG	1 cut(s)	1325
SnaBI	TACGTA	1 cut(s)	1084
SpeI	ACTAGT	2 cut(s)	92, 1102
Sse9I	AATT	8 cut(s)	60, 602, 645, 733, 874, 1028, 1353, 1552
SseBI	AGGCCT	1 cut(s)	578
SsiI	CCGC	4 cut(s)	540, 584, 902, 1268
SspMI	CTAG	5 cut(s)	93, 384, 917, 1077, 1103
StuI	AGGCCT	1 cut(s)	578
StyD4I	CCNGG	2 cut(s)	259, 688
TaaI	ACNGT	1 cut(s)	1474
TaiI	ACGT	1 cut(s)	1086
TaqI	TCGA	4 cut(s)	997, 1394, 1477, 1497
TasI	AATT	8 cut(s)	60, 602, 645, 733, 874, 1028, 1353, 1552
TatI	WGTACW	3 cut(s)	89, 388, 1566
TauI	GCSGC	2 cut(s)	543, 905
TfiI	GAWTC	3 cut(s)	302, 1170, 1391
Tru1I	TTAA	6 cut(s)	33, 59, 1305, 1319, 1410, 1515
Tru9I	TTAA	6 cut(s)	33, 59, 1305, 1319, 1410, 1515
TscAI	CASTG	3 cut(s)	509, 629, 730
TseFI	GTSAC	4 cut(s)	490, 757, 959, 1152
TseI	GCWGC	5 cut(s)	108, 203, 785, 788, 1190
Tsp45I	GTSAC	4 cut(s)	490, 757, 959, 1152
TspDTI	ATGAA	7 cut(s)	168, 210, 225, 294, 353, 474, 992
TspGWI	ACGGA	2 cut(s)	684, 758
TspRI	CASTG	3 cut(s)	509, 629, 730
VpaK11BI	GGWCC	4 cut(s)	141, 224, 943, 1181
VspI	ATTAAT	1 cut(s)	59
XapI	RAATTY	4 cut(s)	602, 733, 874, 1552
XbaI	TCTAGA	1 cut(s)	383
XspI	CTAG	5 cut(s)	93, 384, 917, 1077, 1103
ZrmI	AGTACT	3 cut(s)	91, 390, 1568

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.