Prupe.2G198000_v2.0.a1

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000117
Physical Location & Seq
Reverse (-)
23493703 .. 23497969
4267 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G198000.2

Sequence Viewer

Length: 1755 bp
ATGGAATTAAAACAAAGATGGAAGGAGAGAGAGAAAGAAAAGCAAACCTGGGATTACAGATCGCAGTTGAGTTCTGGGGGGTTTCTTTACTGTCATGCGCAACACGTACTTCCTCCTCTACATAAAGGCCATACAGCATGCCAGCCAAAGCCAACTTATACTTCTCAAGATTATTACCAACAACAAAAGAAAAACCCTCAAGTTATGGCAATGCAATTACGTTCTTTTCTCTTAGGCATACTGCTACTAATTGGCTTTGCTTTCACAAATAGCGAAGCTGATATTAGAGCTCCACCCACACATTTTGACATTGCTTCTCTCAATAGGAGCAGTTTTCCAGAAGGGTTCGTATTTGGTGTAGGTTCTGGATCTTACCAATATGAAGGTGCTGCAAAAGAAGGTGGTAGAGGACCAAGCATTTGGGATACCTTCACCCACAAATATCCAGAAAAGATTAGTGATAGAAGCAATGGAGATATCACTGTTGATCAATATCACCGCTATAAGGAAGATGTGGAGATTATGAAGAATATCGGGTGGGATGCCTATCGATTCTCTATCTCATGGTCAAGATTGTTACCAAATGGAAAGTTAAGTGGAGGAGTGAACAAGGAAGGAATCAAATATTACAACAATCTTATCAATGAGCTCTTACGCAATGGTTTAACGCCATTTGTGACACTCTTTCATTGGGATCTTCCTCAAACTTTAGAAGATGAATATGGTGGTTTCTTAAGCCCTCTTATTGTCAATCATTTTCAAGATTATGCAGAACTTTGTTATAAGGAATTTGGTGATCGAGTAAAGCATTGGAGCACACTGAATGAGCCGCATACCTTCACTTACTATGGTTATGCAACTGGGTCCCTTGCGCCGGGACGATGCTCCGCTTGGCAGCAACTAAACTGCACCGGCGGAGATTCATCAACTGAACCATATTTAGTAGCACACCATCTGCTCCTTGCTCATGCAACTGCTGTAAAATTGTACAAAAATAGATACCAGGCGTCTCAAAATGGAGTGATAGGGATAGAGCTGAATTCAGATTGGTTTGAGCCCCTATCGGAAGTAAAAGAAAATAAAAAAGCTGCATTACGAGCTTTGGATTTTATGTTTGGATGGTTTGCTGAGCCATTGACAAGTGGTGACTATCCTCAAAGCATGCGATCTCGTGTCGGAAGCCGATTACCAAAATTCACAAAAGAACAATCCAAGCTGCTAATTGCTTCATTTGATTTTCTTGGACTAAATTACTATACGGGTTACTATGCAAGTGATGCACCTCAAAATAACTCAGCATTCCCAAGTTGCACAACAGATGCAGGCGTTAATATTTCATCTGAGCGTAATGGGGTCCTCATTGGTCCAAAGGCTGCTTCGGCATGGTTAAATGTTTATCCACAAGGAATTCGACATCTTTTACTCTACATAAAGGAAAAATATCACAATCCAATTATTTACATTACCGAAAATGGTGTGGATGAGTTCAATGATCCGAAATTATCACTTGCCGAAGCCCTTAATGATACCAATAGAATTGACTACTACAATCGCCACCTTTATTATGTTCAAAGTTCTATTGAGAATGGTGTCAAAGTGAAGGGATTCTTTCCGTGGACGTTGCTAGACGACTTTGAATGGAGTTCAGGATTCACTATTCGATTTGGTATCACCTATGTAGATTACAACGATATGCTTAAAAGGTACCCAAAACTCTCGGCGCATTGGTTCAAAAGTTTCCTTAAGAAGTATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_1

Protein Analysis

585

Amino Acids

67.01

Weight (kDa)

7.65

Isoelectric Point (pI)

39.7

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 783
Acc16I TGCGCA 1 cut(s) 99
Acc65I GGTACC 1 cut(s) 1704
AccB1I GGYRCC 1 cut(s) 1704
AciI CCGC 4 cut(s) 499, 830, 888, 915
AclWI GGATC 3 cut(s) 376, 702, 1487
AcsI RAATTY 4 cut(s) 788, 1039, 1193, 1407
AcyI GRCGYC 1 cut(s) 1007
AfaI GTAC 3 cut(s) 108, 989, 1706
AfiI CCNNNNNNNGG 2 cut(s) 505, 874
AflII CTTAAG 2 cut(s) 733, 1742
AflIII ACRYGT 1 cut(s) 103
AgsI TTSAA 5 cut(s) 761, 1489, 1571, 1637, 1732
AjnI CCWGG 2 cut(s) 47, 1002
AjuI GAANNNNNNNTTGG 4 cut(s) 145, 177, 1360, 1392
AluBI AGCT 7 cut(s) 278, 290, 649, 1036, 1088, 1100, 1216
AluI AGCT 7 cut(s) 278, 290, 649, 1036, 1088, 1100, 1216
Alw21I GWGCWC 3 cut(s) 292, 651, 818
Alw26I GTCTC 1 cut(s) 1014
AlwI GGATC 3 cut(s) 376, 702, 1487
AoxI GGCC 1 cut(s) 127
ApeKI GCWGC 5 cut(s) 389, 895, 1088, 1216, 1373
ApoI RAATTY 4 cut(s) 788, 1039, 1193, 1407
ArsI GACNNNNNNTTYG 2 cut(s) 402, 434
Asp700I GAANNNNTTC 1 cut(s) 1604
Asp718I GGTACC 1 cut(s) 1704
AspLEI GCGC 3 cut(s) 100, 874, 1723
AspS9I GGNCC 4 cut(s) 410, 864, 1354, 1364
AsuC2I CCSGG 1 cut(s) 876
AsuHPI GGTGA 5 cut(s) 424, 488, 806, 1157, 1663
AvaII GGWCC 4 cut(s) 410, 864, 1354, 1364
BanI GGYRCC 1 cut(s) 1704
BanII GRGCYC 3 cut(s) 292, 651, 1059
BauI CACGAG 1 cut(s) 1170
Bbv12I GWGCWC 3 cut(s) 292, 651, 818
BbvI GCAGC 5 cut(s) 376, 907, 1075, 1203, 1360
BccI CCATC 3 cut(s) 12, 960, 1113
BciT130I CCWGG 2 cut(s) 49, 1004
BciVI GTATCC 1 cut(s) 418
BclI TGATCA 1 cut(s) 487
BcnI CCSGG 1 cut(s) 876
BcoDI GTCTC 1 cut(s) 1014
BfaI CTAG 1 cut(s) 1625
BfrI CTTAAG 2 cut(s) 733, 1742
BfuI GTATCC 1 cut(s) 418
BisI GCNGC 6 cut(s) 390, 830, 896, 1089, 1217, 1374
BlpI GCTNAGC 1 cut(s) 1128
BlsI GCNGC 6 cut(s) 391, 831, 897, 1090, 1218, 1375
Bme1390I CCNGG 3 cut(s) 49, 876, 1004
Bme18I GGWCC 4 cut(s) 410, 864, 1354, 1364
BmgT120I GGNCC 4 cut(s) 410, 864, 1354, 1364
BmiI GGNNCC 4 cut(s) 865, 866, 1355, 1706
BmrFI CCNGG 3 cut(s) 49, 876, 1004
BmrI ACTGGG 1 cut(s) 870
BmsI GCATC 4 cut(s) 532, 872, 1267, 1309
BmuI ACTGGG 1 cut(s) 870
Bpu1102I GCTNAGC 1 cut(s) 1128
BpuEI CTTGAG 2 cut(s) 150, 183
BpuMI CCSGG 1 cut(s) 876
Bsa29I ATCGAT 1 cut(s) 550
BsaAI YACGTR 1 cut(s) 106
BsaBI GATNNNNATC 2 cut(s) 492, 546
BsaHI GRCGYC 1 cut(s) 1007
BsaJI CCNNGG 2 cut(s) 48, 1613
Bsc4I CCNNNNNNNGG 2 cut(s) 505, 874
Bse118I RCCGGY 1 cut(s) 911
Bse1I ACTGG 1 cut(s) 865
Bse3DI GCAATG 4 cut(s) 216, 309, 475, 664
Bse8I GATNNNNATC 2 cut(s) 492, 546
BseBI CCWGG 2 cut(s) 49, 1004
BseCI ATCGAT 1 cut(s) 550
BseDI CCNNGG 2 cut(s) 48, 1613
BseGI GGATG 3 cut(s) 547, 1124, 1486
BseJI GATNNNNATC 2 cut(s) 492, 546
BseLI CCNNNNNNNGG 2 cut(s) 505, 874
BseMI GCAATG 4 cut(s) 216, 309, 475, 664
BseMII CTCAG 3 cut(s) 1119, 1308, 1332
BseNI ACTGG 1 cut(s) 865
BseRI GAGGAG 2 cut(s) 105, 615
BseXI GCAGC 5 cut(s) 376, 907, 1075, 1203, 1360
BsgI GTGCAG 1 cut(s) 892
BshFI GGCC 1 cut(s) 129
BshNI GGYRCC 1 cut(s) 1704
BshVI ATCGAT 1 cut(s) 550
BsiHKAI GWGCWC 3 cut(s) 292, 651, 818
BsiSI CCGG 2 cut(s) 875, 912
BslFI GGGAC 2 cut(s) 850, 891
BslI CCNNNNNNNGG 2 cut(s) 505, 874
BsmAI GTCTC 1 cut(s) 1014
BsmBI CGTCTC 1 cut(s) 1014
BsmFI GGGAC 2 cut(s) 850, 891
BsmI GAATGC 1 cut(s) 1298
BsnI GGCC 1 cut(s) 129
Bsp1286I GDGCHC 4 cut(s) 292, 651, 818, 1059
Bsp1407I TGTACA 1 cut(s) 987
Bsp143I GATC 7 cut(s) 59, 368, 487, 694, 796, 1166, 1492
Bsp1720I GCTNAGC 1 cut(s) 1128
BspACI CCGC 4 cut(s) 499, 830, 888, 915
BspANI GGCC 1 cut(s) 129
BspCNI CTCAG 3 cut(s) 1120, 1307, 1333
BspDI ATCGAT 1 cut(s) 550
BspLI GGNNCC 4 cut(s) 865, 866, 1355, 1706
BspPI GGATC 3 cut(s) 376, 702, 1487
BspT107I GGYRCC 1 cut(s) 1704
BspTI CTTAAG 2 cut(s) 733, 1742
BsrDI GCAATG 4 cut(s) 216, 309, 475, 664
BsrFI RCCGGY 1 cut(s) 911
BsrGI TGTACA 1 cut(s) 987
BsrI ACTGG 1 cut(s) 865
BssAI RCCGGY 1 cut(s) 911
BssECI CCNNGG 2 cut(s) 48, 1613
BssMI GATC 7 cut(s) 59, 368, 487, 694, 796, 1166, 1492
BssNI GRCGYC 1 cut(s) 1007
BssSI CACGAG 1 cut(s) 1170
Bst2BI CACGAG 1 cut(s) 1170
Bst2UI CCWGG 2 cut(s) 49, 1004
Bst4CI ACNGT 2 cut(s) 92, 484
BstACI GRCGYC 1 cut(s) 1007
BstAFI CTTAAG 2 cut(s) 733, 1742
BstAPI GCANNNNNTGC 1 cut(s) 1277
BstAUI TGTACA 1 cut(s) 987
BstBAI YACGTR 1 cut(s) 106
BstC8I GCNNGC 4 cut(s) 139, 143, 1163, 1324
BstDEI CTNAG 4 cut(s) 232, 1128, 1294, 1341
BstDSI CCRYGG 1 cut(s) 1613
BstF5I GGATG 3 cut(s) 547, 1124, 1486
BstHHI GCGC 3 cut(s) 100, 874, 1723
BstKTI GATC 7 cut(s) 62, 371, 490, 697, 799, 1169, 1495
BstMAI GTCTC 1 cut(s) 1014
BstMBI GATC 7 cut(s) 59, 368, 487, 694, 796, 1166, 1492
BstMWI GCNNNNNNNGC 3 cut(s) 1097, 1277, 1379
BstNI CCWGG 2 cut(s) 49, 1004
BstNSI RCATGY 2 cut(s) 141, 1165
BstSCI CCNGG 3 cut(s) 47, 874, 1002
BstV1I GCAGC 5 cut(s) 376, 907, 1075, 1203, 1360
BstX2I RGATCY 2 cut(s) 368, 694
BstXI CCANNNNNNTGG 1 cut(s) 420
BstYI RGATCY 2 cut(s) 368, 694
Bsu15I ATCGAT 1 cut(s) 550
BsuI GTATCC 1 cut(s) 418
BsuRI GGCC 1 cut(s) 129
BsuTUI ATCGAT 1 cut(s) 550
BtgI CCRYGG 1 cut(s) 1613
BtsCI GGATG 3 cut(s) 547, 1124, 1486
BtsIMutI CAGTG 2 cut(s) 480, 818
Cac8I GCNNGC 4 cut(s) 139, 143, 1163, 1324
CfoI GCGC 3 cut(s) 100, 874, 1723
Cfr10I RCCGGY 1 cut(s) 911
Cfr13I GGNCC 4 cut(s) 410, 864, 1354, 1364
ClaI ATCGAT 1 cut(s) 550
CseI GACGC 1 cut(s) 996
Csp6I GTAC 3 cut(s) 107, 988, 1705
CspCI CAANNNNNGTGG 2 cut(s) 286, 321
CviAII CATG 6 cut(s) 95, 138, 564, 968, 1162, 1383
CviQI GTAC 3 cut(s) 107, 988, 1705
DdeI CTNAG 4 cut(s) 232, 1128, 1294, 1341
DpnI GATC 7 cut(s) 61, 370, 489, 696, 798, 1168, 1494
DpnII GATC 7 cut(s) 59, 368, 487, 694, 796, 1166, 1492
EciI GGCGGA 1 cut(s) 930
Ecl136II GAGCTC 2 cut(s) 290, 649
Eco24I GRGCYC 3 cut(s) 292, 651, 1059
Eco32I GATATC 1 cut(s) 478
Eco47I GGWCC 4 cut(s) 410, 864, 1354, 1364
Eco53kI GAGCTC 2 cut(s) 290, 649
EcoICRI GAGCTC 2 cut(s) 290, 649
EcoO109I RGGNCCY 2 cut(s) 864, 1354
EcoRI GAATTC 2 cut(s) 1039, 1407
EcoRII CCWGG 2 cut(s) 47, 1002
EcoRV GATATC 1 cut(s) 478
EcoT38I GRGCYC 3 cut(s) 292, 651, 1059
Esp3I CGTCTC 1 cut(s) 1014
FaeI CATG 6 cut(s) 98, 141, 567, 971, 1165, 1386
FalI AAGNNNNNCTT 2 cut(s) 1592, 1624
FaqI GGGAC 2 cut(s) 850, 891
FatI CATG 6 cut(s) 94, 137, 563, 967, 1161, 1382
FbaI TGATCA 1 cut(s) 487
Fnu4HI GCNGC 6 cut(s) 390, 830, 896, 1089, 1217, 1374
FokI GGATG 3 cut(s) 554, 1131, 1493
FriOI GRGCYC 3 cut(s) 292, 651, 1059
Fsp4HI GCNGC 6 cut(s) 390, 830, 896, 1089, 1217, 1374
FspBI CTAG 1 cut(s) 1625
FspI TGCGCA 1 cut(s) 99
GlaI GCGC 3 cut(s) 99, 873, 1722
GluI GCNGC 6 cut(s) 390, 830, 896, 1089, 1217, 1374
HaeIII GGCC 1 cut(s) 129
HapII CCGG 2 cut(s) 875, 912
HgaI GACGC 1 cut(s) 996
HhaI GCGC 3 cut(s) 100, 874, 1723
Hin1I GRCGYC 1 cut(s) 1007
Hin1II CATG 6 cut(s) 98, 141, 567, 971, 1165, 1386
Hin6I GCGC 3 cut(s) 98, 872, 1721
HinP1I GCGC 3 cut(s) 98, 872, 1721
HinfI GANTC 5 cut(s) 552, 618, 920, 1605, 1650
HpaII CCGG 2 cut(s) 875, 912
HphI GGTGA 5 cut(s) 424, 488, 806, 1157, 1663
Hpy166II GTNNAC 2 cut(s) 607, 1617
Hpy188I TCNGA 5 cut(s) 1045, 1066, 1178, 1342, 1497
Hpy188III TCNNGA 7 cut(s) 167, 338, 366, 446, 570, 761, 1647
Hpy8I GTNNAC 2 cut(s) 607, 1617
HpyAV CCTTC 8 cut(s) 16, 335, 377, 392, 439, 608, 847, 1594
HpyCH4III ACNGT 2 cut(s) 92, 484
HpyCH4IV ACGT 3 cut(s) 105, 220, 1619
HpyF10VI GCNNNNNNNGC 3 cut(s) 1097, 1277, 1379
HpyF3I CTNAG 4 cut(s) 232, 1128, 1294, 1341
HpySE526I ACGT 3 cut(s) 105, 220, 1619
Hsp92I GRCGYC 1 cut(s) 1007
Hsp92II CATG 6 cut(s) 98, 141, 567, 971, 1165, 1386
HspAI GCGC 3 cut(s) 98, 872, 1721
KflI GGGWCCC 1 cut(s) 864
KpnI GGTACC 1 cut(s) 1708
Ksp22I TGATCA 1 cut(s) 487
Kzo9I GATC 7 cut(s) 59, 368, 487, 694, 796, 1166, 1492
LmnI GCTCC 5 cut(s) 295, 327, 813, 890, 963
Lsp1109I GCAGC 5 cut(s) 376, 907, 1075, 1203, 1360
LweI GCATC 4 cut(s) 532, 872, 1267, 1309
MaeI CTAG 1 cut(s) 1625
MaeII ACGT 3 cut(s) 105, 220, 1619
MaeIII GTNAC 4 cut(s) 576, 676, 1145, 1262
MalI GATC 7 cut(s) 61, 370, 489, 696, 798, 1168, 1494
MboI GATC 7 cut(s) 59, 368, 487, 694, 796, 1166, 1492
MboII GAAGA 4 cut(s) 521, 538, 689, 725
MflI RGATCY 2 cut(s) 368, 694
MhlI GDGCHC 4 cut(s) 292, 651, 818, 1059
MmeI TCCRAC 1 cut(s) 1156
MroXI GAANNNNTTC 1 cut(s) 1604
MseI TTAA 9 cut(s) 8, 593, 665, 734, 1329, 1388, 1521, 1698, 1743
MspCI CTTAAG 2 cut(s) 733, 1742
MspI CCGG 2 cut(s) 875, 912
MspR9I CCNGG 3 cut(s) 49, 876, 1004
Mva1269I GAATGC 1 cut(s) 1298
MvaI CCWGG 2 cut(s) 49, 1004
MwoI GCNNNNNNNGC 3 cut(s) 1097, 1277, 1379
NciI CCSGG 1 cut(s) 876
NdeII GATC 7 cut(s) 59, 368, 487, 694, 796, 1166, 1492
NlaIII CATG 6 cut(s) 98, 141, 567, 971, 1165, 1386
NlaIV GGNNCC 4 cut(s) 865, 866, 1355, 1706
NmeAIII GCCGAG 1 cut(s) 1697
NmuCI GTSAC 2 cut(s) 676, 1145
NsbI TGCGCA 1 cut(s) 99
NspI RCATGY 2 cut(s) 141, 1165
PaeI GCATGC 2 cut(s) 141, 1165
PctI GAATGC 1 cut(s) 1298
PdmI GAANNNNTTC 1 cut(s) 1604
PfeI GAWTC 5 cut(s) 552, 618, 920, 1605, 1650
PkrI GCNGC 6 cut(s) 391, 831, 897, 1090, 1218, 1375
Ppu21I YACGTR 1 cut(s) 106
PpuMI RGGWCCY 2 cut(s) 864, 1354
PsiI TTATAA 1 cut(s) 783
Psp124BI GAGCTC 2 cut(s) 292, 651
Psp5II RGGWCCY 2 cut(s) 864, 1354
Psp6I CCWGG 2 cut(s) 47, 1002
PspGI CCWGG 2 cut(s) 47, 1002
PspN4I GGNNCC 4 cut(s) 865, 866, 1355, 1706
PspPI GGNCC 4 cut(s) 410, 864, 1354, 1364
PspPPI RGGWCCY 2 cut(s) 864, 1354
PsuI RGATCY 2 cut(s) 368, 694
RsaI GTAC 3 cut(s) 108, 989, 1706
RsaNI GTAC 3 cut(s) 107, 988, 1705
SacI GAGCTC 2 cut(s) 292, 651
SaqAI TTAA 9 cut(s) 8, 593, 665, 734, 1329, 1388, 1521, 1698, 1743
SatI GCNGC 6 cut(s) 390, 830, 896, 1089, 1217, 1374
Sau3AI GATC 7 cut(s) 59, 368, 487, 694, 796, 1166, 1492
Sau96I GGNCC 4 cut(s) 410, 864, 1354, 1364
ScrFI CCNGG 3 cut(s) 49, 876, 1004
SduI GDGCHC 4 cut(s) 292, 651, 818, 1059
SfaNI GCATC 4 cut(s) 532, 872, 1267, 1309
SgrAI CRCCGGYG 1 cut(s) 911
SinI GGWCC 4 cut(s) 410, 864, 1354, 1364
SmlI CTYRAG 4 cut(s) 165, 198, 733, 1742
SmoI CTYRAG 4 cut(s) 165, 198, 733, 1742
SphI GCATGC 2 cut(s) 141, 1165
SsiI CCGC 4 cut(s) 499, 830, 888, 915
SspI AATATT 2 cut(s) 626, 1333
SspMI CTAG 1 cut(s) 1625
SstI GAGCTC 2 cut(s) 292, 651
StyD4I CCNGG 3 cut(s) 47, 874, 1002
TaaI ACNGT 2 cut(s) 92, 484
TaiI ACGT 3 cut(s) 108, 223, 1622
TaqI TCGA 4 cut(s) 550, 799, 1411, 1660
TatI WGTACW 1 cut(s) 987
TauI GCSGC 1 cut(s) 832
TfiI GAWTC 5 cut(s) 552, 618, 920, 1605, 1650
Tru1I TTAA 9 cut(s) 8, 593, 665, 734, 1329, 1388, 1521, 1698, 1743
Tru9I TTAA 9 cut(s) 8, 593, 665, 734, 1329, 1388, 1521, 1698, 1743
TscAI CASTG 2 cut(s) 487, 825
TseFI GTSAC 2 cut(s) 676, 1145
TseI GCWGC 5 cut(s) 389, 895, 1088, 1216, 1373
Tsp45I GTSAC 2 cut(s) 676, 1145
TspDTI ATGAA 7 cut(s) 396, 539, 677, 732, 912, 1218, 1326
TspGWI ACGGA 1 cut(s) 1602
TspRI CASTG 2 cut(s) 487, 825
Vha464I CTTAAG 2 cut(s) 733, 1742
VpaK11BI GGWCC 4 cut(s) 410, 864, 1354, 1364
XapI RAATTY 4 cut(s) 788, 1039, 1193, 1407
XceI RCATGY 2 cut(s) 141, 1165
XmnI GAANNNNTTC 1 cut(s) 1604
XspI CTAG 1 cut(s) 1625
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.