Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5A

Orthogroup ID

OG0000117

Physical Location & Seq

Genomic Coordinates Reverse (-)

80410507 .. 80418045

Gene Structure 7539 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5AG468700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1311 bp

ATGTCTTACGTGTTTATCTCTAATGTCACGTTTCCCCTCTATATAAAGGGGGCCAAGTATAGAGCCAGAAAACATAGTCGATCAGTTATGGCACTTCAAGGCACCCTCATCTCTGCAATCATACTTGTTTTTAGCTGTGCAGTGGCAACTAGTATAGCCACCGCCCCAAGCCATTACGACGTTGCTTCCATCAACCGGAGCACCTTTCCGGCAGGTTTCATATTTGGGACAGCTTCTTCAGCTTACCAGTTCGAAGGTGCTGCAAAAGAAGATGGAAGAGGACCAAGCATATGGGACACATACACTCACAAAATTCCAGATAAGATAAAAGACGGCAGCAATGGAGATGTCGCTATTGATGCATATCACCACTACAAGGAGGATGTTGGCATCATGAAAAATATGGGTTTTGATGCTTACAGATTCTCCATCTCGTGGTCTAGATTGTTACCAAATGGAACGTTAAGAGGGGGTGTGAATAAGGAAGGAATCAAATATTACAACAACCTCATAAACGAGCTTCTAGCCAATGGTCTAAAGCCCTTTGTCACACTCTTCCACTGGGATCTTCCCCAAGCTTTAGAAGATGAATACGGTGGCTTCTTAAGCCCTCAAATTGTAAACCATTTCCAAGACTACGCAGAGCTATGCTTCAAGGAATTTGGTGATAGAGTTAAGGATTGGATCACATTAAACGAGCCCTGGAGCTACGCCATTGGTGGTTATGTAATTGGGACGTTTGCACCATGTCGATGTTCTGAATGGCAAAACCTAAATTGCACCGGTGGAAATTCAGGAACAGAGCCATATTTGGTCTCACACTATCAGCTTCTAGCCCACGCAGCAGCCGTAAAGTTATACAAGGAGAAGTATCAGGCTGATCAGATGGGCGTGATAGGGATAACAATACTGTCACACTGGTTTGTGCCTTTTTCTGATGCCAAGCACCATGAAGAAGCTGTGTGTTATCCGTCACACTGGTTTGTGCCCGTTTCTGATGCCAAGCACCATGAAGAAGCTGCTCAACGAGCATTGGATTTTATGTTTGGATGGTATATGGATCCCTTAACAAACGGTGAATATCCGCACAGCATGAGATCTCTTGTCGGAGATCGATTACCCAAGTTCACTAAAGAGCAATCCGAGATGTTAAAAGGTTCATTTGATTTTCTGGGATTGAATTACTACACCGCTAACTATGCTACTTATGCACCTCATCTCAATAATGCTGCAAACCCTAGCTACTTTACAGATGCTGTCGCTACTGTTTCCAGTGAGTTGAACATTATACTAATCCAAAAGTGTAGTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0008150 GO:0008152 GO:0008422 GO:0015926 GO:0016787 GO:0016798 GO:0071704 GO:1901135 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_1

Protein Analysis

436

Amino Acids

48.93

Weight (kDa)

6.18

Isoelectric Point (pI)

37.25

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_1	PF00232	66 - 318	1e-94	Glycosyl hydrolase family 1
Glyco_hydro_1	PF00232	322 - 410	2.2e-17	Glycosyl hydrolase family 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Publication-ready

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Orthologous Genes (Group: OG0000117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca	FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica	MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica	Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis	pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis	RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata	RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora	Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa	Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha	Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana	Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	203
AccB1I	GGYRCC	1 cut(s)	101
AccB7I	CCANNNNNTGG	1 cut(s)	435
AciI	CCGC	3 cut(s)	162, 1085, 1191
AclI	AACGTT	1 cut(s)	461
AclWI	GGATC	4 cut(s)	573, 692, 1055, 1068
AcsI	RAATTY	3 cut(s)	312, 659, 790
AcuI	CTGAAG	1 cut(s)	222
AfiI	CCNNNNNNNGG	3 cut(s)	195, 376, 435
AflII	CTTAAG	1 cut(s)	604
AflIII	ACRYGT	1 cut(s)	9
AgeI	ACCGGT	1 cut(s)	782
AgsI	TTSAA	4 cut(s)	98, 655, 1180, 1282
AhlI	ACTAGT	1 cut(s)	149
AjnI	CCWGG	1 cut(s)	701
Alw21I	GWGCWC	1 cut(s)	203
Alw26I	GTCTC	1 cut(s)	820
AlwI	GGATC	4 cut(s)	573, 692, 1055, 1068
AlwNI	CAGNNNCTG	1 cut(s)	1256
AoxI	GGCC	1 cut(s)	51
ApeKI	GCWGC	6 cut(s)	260, 336, 842, 845, 1019, 1229
ApoI	RAATTY	3 cut(s)	312, 659, 790
AsiGI	ACCGGT	1 cut(s)	782
AspS9I	GGNCC	2 cut(s)	51, 281
AsuHPI	GGTGA	3 cut(s)	359, 677, 1088
AsuII	TTCGAA	1 cut(s)	252
AvaII	GGWCC	1 cut(s)	281
BaeGI	GKGCMC	1 cut(s)	990
BamHI	GGATCC	1 cut(s)	1060
BanI	GGYRCC	1 cut(s)	101
BanII	GRGCYC	1 cut(s)	702
BauI	CACGAG	1 cut(s)	433
Bbv12I	GWGCWC	1 cut(s)	203
BbvI	GCAGC	6 cut(s)	247, 348, 854, 857, 1006, 1216
BccI	CCATC	5 cut(s)	197, 266, 437, 880, 1044
BceAI	ACGGC	2 cut(s)	349, 833
BcgI	CGANNNNNNTGC	2 cut(s)	242, 276
BciT130I	CCWGG	1 cut(s)	703
BclI	TGATCA	1 cut(s)	880
BcoDI	GTCTC	1 cut(s)	820
BcuI	ACTAGT	1 cut(s)	149
BfaI	CTAG	5 cut(s)	150, 441, 524, 833, 1239
BfrI	CTTAAG	1 cut(s)	604
BfuAI	ACCTGC	1 cut(s)	203
BglII	AGATCT	1 cut(s)	1097
BisI	GCNGC	6 cut(s)	261, 337, 843, 846, 1020, 1230
BlsI	GCNGC	6 cut(s)	262, 338, 844, 847, 1021, 1231
Bme1390I	CCNGG	1 cut(s)	703
Bme18I	GGWCC	1 cut(s)	281
BmgT120I	GGNCC	2 cut(s)	51, 281
BmiI	GGNNCC	3 cut(s)	52, 103, 1062
BmrFI	CCNGG	1 cut(s)	703
BmrI	ACTGGG	1 cut(s)	571
BmsI	GCATC	6 cut(s)	349, 399, 403, 928, 988, 1243
BmuI	ACTGGG	1 cut(s)	571
BpmI	CTGGAG	1 cut(s)	724
Bpu14I	TTCGAA	1 cut(s)	252
Bsa29I	ATCGAT	1 cut(s)	1114
BsaAI	YACGTR	1 cut(s)	10
BsaBI	GATNNNNATC	1 cut(s)	363
BsaI	GGTCTC	1 cut(s)	820
BsaJI	CCNNGG	1 cut(s)	701
BsaWI	WCCGGW	2 cut(s)	195, 782
BsaXI	ACNNNNNCTCC	2 cut(s)	410, 440
Bsc4I	CCNNNNNNNGG	3 cut(s)	195, 376, 435
Bse118I	RCCGGY	1 cut(s)	782
Bse1I	ACTGG	5 cut(s)	247, 566, 923, 983, 1272
Bse3DI	GCAATG	1 cut(s)	346
Bse8I	GATNNNNATC	1 cut(s)	363
BseBI	CCWGG	1 cut(s)	703
BseCI	ATCGAT	1 cut(s)	1114
BseDI	CCNNGG	1 cut(s)	701
BseGI	GGATG	2 cut(s)	388, 1055
BseJI	GATNNNNATC	1 cut(s)	363
BseLI	CCNNNNNNNGG	3 cut(s)	195, 376, 435
BseMI	GCAATG	1 cut(s)	346
BseNI	ACTGG	5 cut(s)	247, 566, 923, 983, 1272
BseSI	GKGCMC	1 cut(s)	990
BseXI	GCAGC	6 cut(s)	247, 348, 854, 857, 1006, 1216
BsgI	GTGCAG	1 cut(s)	159
BshFI	GGCC	1 cut(s)	53
BshNI	GGYRCC	1 cut(s)	101
BshTI	ACCGGT	1 cut(s)	782
BshVI	ATCGAT	1 cut(s)	1114
BsiHKAI	GWGCWC	1 cut(s)	203
BsiSI	CCGG	3 cut(s)	196, 209, 783
BslFI	GGGAC	3 cut(s)	241, 308, 748
BslI	CCNNNNNNNGG	3 cut(s)	195, 376, 435
BsmAI	GTCTC	1 cut(s)	820
BsmFI	GGGAC	3 cut(s)	241, 308, 748
BsnI	GGCC	1 cut(s)	53
Bso31I	GGTCTC	1 cut(s)	820
Bsp119I	TTCGAA	1 cut(s)	252
Bsp1286I	GDGCHC	3 cut(s)	203, 702, 990
Bsp143I	GATC	7 cut(s)	80, 565, 684, 880, 1060, 1097, 1111
BspACI	CCGC	3 cut(s)	162, 1085, 1191
BspANI	GGCC	1 cut(s)	53
BspDI	ATCGAT	1 cut(s)	1114
BspHI	TCATGA	1 cut(s)	393
BspLI	GGNNCC	3 cut(s)	52, 103, 1062
BspMI	ACCTGC	1 cut(s)	203
BspPI	GGATC	4 cut(s)	573, 692, 1055, 1068
BspT104I	TTCGAA	1 cut(s)	252
BspT107I	GGYRCC	1 cut(s)	101
BspTI	CTTAAG	1 cut(s)	604
BspTNI	GGTCTC	1 cut(s)	820
BsrDI	GCAATG	1 cut(s)	346
BsrFI	RCCGGY	1 cut(s)	782
BsrI	ACTGG	5 cut(s)	247, 566, 923, 983, 1272
BssAI	RCCGGY	1 cut(s)	782
BssECI	CCNNGG	1 cut(s)	701
BssMI	GATC	7 cut(s)	80, 565, 684, 880, 1060, 1097, 1111
BssSI	CACGAG	1 cut(s)	433
Bst2BI	CACGAG	1 cut(s)	433
Bst2UI	CCWGG	1 cut(s)	703
Bst4CI	ACNGT	4 cut(s)	596, 912, 1076, 1267
Bst6I	CTCTTC	2 cut(s)	271, 560
BstAFI	CTTAAG	1 cut(s)	604
BstBAI	YACGTR	1 cut(s)	10
BstBI	TTCGAA	1 cut(s)	252
BstF5I	GGATG	2 cut(s)	388, 1055
BstKTI	GATC	7 cut(s)	83, 568, 687, 883, 1063, 1100, 1114
BstMAI	GTCTC	1 cut(s)	820
BstMBI	GATC	7 cut(s)	80, 565, 684, 880, 1060, 1097, 1111
BstMWI	GCNNNNNNNGC	7 cut(s)	239, 359, 606, 842, 1028, 1199, 1208
BstNI	CCWGG	1 cut(s)	703
BstSCI	CCNGG	1 cut(s)	701
BstSLI	GKGCMC	1 cut(s)	990
BstV1I	GCAGC	6 cut(s)	247, 348, 854, 857, 1006, 1216
BstX2I	RGATCY	3 cut(s)	565, 1060, 1097
BstXI	CCANNNNNNTGG	1 cut(s)	291
BstYI	RGATCY	3 cut(s)	565, 1060, 1097
Bsu15I	ATCGAT	1 cut(s)	1114
BsuRI	GGCC	1 cut(s)	53
BsuTUI	ATCGAT	1 cut(s)	1114
BtsCI	GGATG	2 cut(s)	388, 1055
BtsI	GCAGTG	1 cut(s)	147
BtsIMutI	CAGTG	5 cut(s)	147, 559, 916, 976, 1279
BveI	ACCTGC	1 cut(s)	203
CaiI	CAGNNNCTG	1 cut(s)	1256
CciI	TCATGA	1 cut(s)	393
Cfr10I	RCCGGY	1 cut(s)	782
Cfr13I	GGNCC	2 cut(s)	51, 281
ClaI	ATCGAT	1 cut(s)	1114
CspAI	ACCGGT	1 cut(s)	782
CviAII	CATG	5 cut(s)	394, 747, 950, 1010, 1093
DpnI	GATC	7 cut(s)	82, 567, 686, 882, 1062, 1099, 1113
DpnII	GATC	7 cut(s)	80, 565, 684, 880, 1060, 1097, 1111
Eam1104I	CTCTTC	2 cut(s)	271, 560
EarI	CTCTTC	2 cut(s)	271, 560
Eco24I	GRGCYC	1 cut(s)	702
Eco31I	GGTCTC	1 cut(s)	820
Eco47I	GGWCC	1 cut(s)	281
Eco57I	CTGAAG	1 cut(s)	222
EcoRII	CCWGG	1 cut(s)	701
EcoT22I	ATGCAT	1 cut(s)	364
EcoT38I	GRGCYC	1 cut(s)	702
FaeI	CATG	5 cut(s)	397, 750, 953, 1013, 1096
FaqI	GGGAC	3 cut(s)	241, 308, 748
FatI	CATG	5 cut(s)	393, 746, 949, 1009, 1092
FauNDI	CATATG	1 cut(s)	290
FbaI	TGATCA	1 cut(s)	880
Fnu4HI	GCNGC	6 cut(s)	261, 337, 843, 846, 1020, 1230
FokI	GGATG	2 cut(s)	395, 1062
FriOI	GRGCYC	1 cut(s)	702
Fsp4HI	GCNGC	6 cut(s)	261, 337, 843, 846, 1020, 1230
FspBI	CTAG	5 cut(s)	150, 441, 524, 833, 1239
GluI	GCNGC	6 cut(s)	261, 337, 843, 846, 1020, 1230
GsuI	CTGGAG	1 cut(s)	724
HaeIII	GGCC	1 cut(s)	53
HapII	CCGG	3 cut(s)	196, 209, 783
Hin1II	CATG	5 cut(s)	397, 750, 953, 1013, 1096
HindIII	AAGCTT	1 cut(s)	576
HinfI	GANTC	2 cut(s)	423, 489
HpaII	CCGG	3 cut(s)	196, 209, 783
HphI	GGTGA	3 cut(s)	359, 677, 1088
Hpy166II	GTNNAC	2 cut(s)	622, 1128
Hpy188I	TCNGA	6 cut(s)	760, 885, 937, 997, 1109, 1144
Hpy188III	TCNNGA	4 cut(s)	317, 394, 441, 795
Hpy8I	GTNNAC	2 cut(s)	622, 1128
Hpy99I	CGWCG	1 cut(s)	182
HpyAV	CCTTC	2 cut(s)	248, 479
HpyCH4III	ACNGT	4 cut(s)	596, 912, 1076, 1267
HpyCH4IV	ACGT	5 cut(s)	9, 29, 180, 461, 737
HpyCH4V	TGCA	8 cut(s)	116, 140, 263, 362, 743, 780, 1211, 1232
HpyF10VI	GCNNNNNNNGC	7 cut(s)	239, 359, 606, 842, 1028, 1199, 1208
HpySE526I	ACGT	5 cut(s)	9, 29, 180, 461, 737
Hsp92II	CATG	5 cut(s)	397, 750, 953, 1013, 1096
Ksp22I	TGATCA	1 cut(s)	880
Kzo9I	GATC	7 cut(s)	80, 565, 684, 880, 1060, 1097, 1111
LmnI	GCTCC	2 cut(s)	198, 705
Lsp1109I	GCAGC	6 cut(s)	247, 348, 854, 857, 1006, 1216
LweI	GCATC	6 cut(s)	349, 399, 403, 928, 988, 1243
MaeI	CTAG	5 cut(s)	150, 441, 524, 833, 1239
MaeII	ACGT	5 cut(s)	9, 29, 180, 461, 737
MaeIII	GTNAC	5 cut(s)	25, 447, 547, 912, 972
MalI	GATC	7 cut(s)	82, 567, 686, 882, 1062, 1099, 1113
MboI	GATC	7 cut(s)	80, 565, 684, 880, 1060, 1097, 1111
MboII	GAAGA	8 cut(s)	228, 281, 288, 547, 560, 596, 965, 1025
MflI	RGATCY	3 cut(s)	565, 1060, 1097
MhlI	GDGCHC	3 cut(s)	203, 702, 990
MluCI	AATT	7 cut(s)	312, 615, 659, 729, 775, 790, 1180
MmeI	TCCRAC	1 cut(s)	1087
MnlI	CCTC	8 cut(s)	47, 116, 272, 373, 461, 518, 621, 1224
Mph1103I	ATGCAT	1 cut(s)	364
MseI	TTAA	7 cut(s)	464, 605, 675, 692, 1067, 1151, 1309
MslI	CAYNNNNRTG	1 cut(s)	751
MspCI	CTTAAG	1 cut(s)	604
MspI	CCGG	3 cut(s)	196, 209, 783
MspR9I	CCNGG	1 cut(s)	703
MvaI	CCWGG	1 cut(s)	703
MwoI	GCNNNNNNNGC	7 cut(s)	239, 359, 606, 842, 1028, 1199, 1208
NdeI	CATATG	1 cut(s)	290
NdeII	GATC	7 cut(s)	80, 565, 684, 880, 1060, 1097, 1111
NlaIII	CATG	5 cut(s)	397, 750, 953, 1013, 1096
NlaIV	GGNNCC	3 cut(s)	52, 103, 1062
NmuCI	GTSAC	4 cut(s)	25, 547, 912, 972
NsiI	ATGCAT	1 cut(s)	364
NspV	TTCGAA	1 cut(s)	252
PagI	TCATGA	1 cut(s)	393
PcsI	WCGNNNNNNNCGW	1 cut(s)	846
PfeI	GAWTC	2 cut(s)	423, 489
PflMI	CCANNNNNTGG	1 cut(s)	435
PinAI	ACCGGT	1 cut(s)	782
PkrI	GCNGC	6 cut(s)	262, 338, 844, 847, 1021, 1231
Ppu21I	YACGTR	1 cut(s)	10
Psp1406I	AACGTT	1 cut(s)	461
Psp6I	CCWGG	1 cut(s)	701
PspGI	CCWGG	1 cut(s)	701
PspN4I	GGNNCC	3 cut(s)	52, 103, 1062
PspPI	GGNCC	2 cut(s)	51, 281
PstNI	CAGNNNCTG	1 cut(s)	1256
PsuI	RGATCY	3 cut(s)	565, 1060, 1097
RseI	CAYNNNNRTG	1 cut(s)	751
SaqAI	TTAA	7 cut(s)	464, 605, 675, 692, 1067, 1151, 1309
SatI	GCNGC	6 cut(s)	261, 337, 843, 846, 1020, 1230
Sau3AI	GATC	7 cut(s)	80, 565, 684, 880, 1060, 1097, 1111
Sau96I	GGNCC	2 cut(s)	51, 281
ScrFI	CCNGG	1 cut(s)	703
SduI	GDGCHC	3 cut(s)	203, 702, 990
SfaNI	GCATC	6 cut(s)	349, 399, 403, 928, 988, 1243
SfuI	TTCGAA	1 cut(s)	252
SgrAI	CRCCGGYG	1 cut(s)	782
SinI	GGWCC	1 cut(s)	281
SmiMI	CAYNNNNRTG	1 cut(s)	751
SmlI	CTYRAG	1 cut(s)	604
SmoI	CTYRAG	1 cut(s)	604
SpeI	ACTAGT	1 cut(s)	149
Sse9I	AATT	7 cut(s)	312, 615, 659, 729, 775, 790, 1180
SsiI	CCGC	3 cut(s)	162, 1085, 1191
SspI	AATATT	1 cut(s)	497
SspMI	CTAG	5 cut(s)	150, 441, 524, 833, 1239
StyD4I	CCNGG	1 cut(s)	701
TaaI	ACNGT	4 cut(s)	596, 912, 1076, 1267
TaiI	ACGT	5 cut(s)	12, 32, 183, 464, 740
TaqI	TCGA	4 cut(s)	79, 252, 751, 1114
TasI	AATT	7 cut(s)	312, 615, 659, 729, 775, 790, 1180
TfiI	GAWTC	2 cut(s)	423, 489
Tru1I	TTAA	7 cut(s)	464, 605, 675, 692, 1067, 1151, 1309
Tru9I	TTAA	7 cut(s)	464, 605, 675, 692, 1067, 1151, 1309
TscAI	CASTG	5 cut(s)	147, 566, 923, 983, 1279
TseFI	GTSAC	4 cut(s)	25, 547, 912, 972
TseI	GCWGC	6 cut(s)	260, 336, 842, 845, 1019, 1229
Tsp45I	GTSAC	4 cut(s)	25, 547, 912, 972
TspDTI	ATGAA	6 cut(s)	208, 410, 603, 966, 1026, 1149
TspGWI	ACGGA	1 cut(s)	960
TspRI	CASTG	5 cut(s)	147, 566, 923, 983, 1279
Van91I	CCANNNNNTGG	1 cut(s)	435
Vha464I	CTTAAG	1 cut(s)	604
VpaK11BI	GGWCC	1 cut(s)	281
XapI	RAATTY	3 cut(s)	312, 659, 790
XbaI	TCTAGA	1 cut(s)	440
XspI	CTAG	5 cut(s)	150, 441, 524, 833, 1239
Zsp2I	ATGCAT	1 cut(s)	364

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.