FvH4_3g43510

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb3
OG0000117
Physical Location & Seq
Forward (+)
36260798 .. 36264831
4034 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_3g43510.t1

Sequence Viewer

Length: 1605 bp
ATGGCACTCCGATTAGGGTTAATCCTCCTCCTACTTGTTCTTGTCTGCACTGCAGCTGTGACAACCGGTAGAGCTGCCAGCTCGCGGCACCGTGACAGCTCTTCCCTCCACCGGAGCAGTTTTCCGGCTGGCTTCGTATTCGGAACAGCTTCATCGGCTTACCAGTATGAAGGTGCTGCAAATGAAGGTGGTAGAGGTCCAAGTATATGGGATACATACACTCACAAGTATCCCGAGAAGATACACGACCACAGTACTGCAGATGTGGCTATTGATGAGTATCATCGCTATAAGGAAGATATCCGGATTATGAAAGATATGGGGCTTGATGCTTACAGATTTTCAATTTCATGGTCAAGATTGTTACCAAATGGAAAGCTGAGTGGAGGTGTGAACAAGGAAGGAATCAAATACTACAATAACCTCATCAACGAGCTTCTAGCCAACGGTCTTGTACCCTATGTTACGCTCTTTCATTGGGATACCCCTCAAGCTCTGGAAGATGAATTCAGTGGGTTTCTTAGCCCTAAAATTGTGGACCATTTCAAGGATTATGCAGATCTCTGCTATAAAGAATTTGGTGACAGAGTTAGGTATTGGATCACGTTAAATGAGCCATGGAGCTACACCAATGGTGGTTATGTTATTGGAACGTTTGCGCCAACCCGATGTTCTGATTGGCAAAATCTGAATTGTACCGGTGGAGATTCAGGGACTGAGCCATACTTGGCGACACATTATCAACTCCTGGCTCATGCAGCAGCCGTGAAGTTGTACAGAGACAAATATCAGGCATCACAGAAGGGCGTGATCGGAATAACACTACTATCATACTGGTTTGTGCCATATTCTGATGCAAAGTGTGATGTGGATGCTGCAGAACGTGCATTGGATTTTATGTATGGATGGTTTATGGACCCCCTGATTAACGGAGACTATCCACACAGCATGCGATATCTTGTTGCAGAACGATTACCAAAATTCACCAAAGAAGAATCCATGTTGCTTAAGGGGTCATTTGATTTCATTGGAGTAAACTACTACACTGCTAACTTCGCAGCCTACAATGCACCTCGGTTTAATGCTACTCATCCTAATTCAAATAACCCAAGCTACTTGACAGACGCTCTTGTCAATCTTTCAGTGGAACGTGATGGAGTTCCTATTGGCCCAAAGACTGCTTTGGATTGGCTCTATGTTTATCCAGAAGGATTTCGAGAGCTATTGCTCTACACAAAGAACAAGTATAATGATCCAGTTATCTACGTCACTGAAAACGGAGTTAATGAGCTAAACGATCCCGGATTATCACTCGAGGAATCCCTAACCGATCATCATAGAATTGACTATTACGATGCCCATCTCAGTTATCTGCTTTCAGCAATGAAGGATGGGGTTAATGTGAAAGGATATTTTGCGTGGTCATTGTTTGATAACTTTGAATGGAATACGGGTTACACTTGTAGATTCGGCTTCAACTTTATAGATTACAGAAATGGACTCAAACGATACCCTAAACTCTCAGCTGGCTGGTTCAAGAATTTTCTTCAGAAGACGTCTGTTAAGTTAGATACAAGTTCCTCTCGAGAGTTTCAATCAATTTAA

Protein Analysis

535

Amino Acids

60.85

Weight (kDa)

5.94

Isoelectric Point (pI)

23.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 38 - 518 1.3e-156 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1130
AatII GACGTC 1 cut(s) 1559
AccB1I GGYRCC 1 cut(s) 87
AccII CGCG 1 cut(s) 85
AccIII TCCGGA 1 cut(s) 303
AciI CCGC 1 cut(s) 85
AclI AACGTT 1 cut(s) 653
AclWI GGATC 3 cut(s) 608, 1247, 1292
AcsI RAATTY 4 cut(s) 506, 575, 980, 1540
AcuI CTGAAG 1 cut(s) 1532
AcyI GRCGYC 1 cut(s) 1556
AfaI GTAC 4 cut(s) 256, 456, 697, 776
AfiI CCNNNNNNNGG 3 cut(s) 84, 111, 547
AflII CTTAAG 1 cut(s) 1007
AgeI ACCGGT 2 cut(s) 65, 698
AgsI TTSAA 7 cut(s) 345, 547, 1101, 1442, 1477, 1537, 1595
AjnI CCWGG 1 cut(s) 747
AjuI GAANNNNNNNTTGG 2 cut(s) 655, 687
Alw26I GTCTC 2 cut(s) 774, 927
AlwI GGATC 3 cut(s) 608, 1247, 1292
AlwNI CAGNNNCTG 1 cut(s) 716
Ama87I CYCGRG 3 cut(s) 233, 1313, 1584
Aor13HI TCCGGA 1 cut(s) 303
AoxI GGCC 1 cut(s) 1168
ApeKI GCWGC 7 cut(s) 53, 74, 176, 758, 761, 875, 1058
ApoI RAATTY 4 cut(s) 506, 575, 980, 1540
AsiGI ACCGGT 2 cut(s) 65, 698
Asp700I GAANNNNTTC 2 cut(s) 148, 1212
AspLEI GCGC 1 cut(s) 661
AspS9I GGNCC 4 cut(s) 197, 538, 916, 1169
AsuC2I CCSGG 1 cut(s) 1302
AsuHPI GGTGA 2 cut(s) 593, 976
AvaI CYCGRG 3 cut(s) 233, 1313, 1584
AvaII GGWCC 3 cut(s) 197, 538, 916
BanI GGYRCC 1 cut(s) 87
BbsI GAAGAC 1 cut(s) 1559
BbvI GCAGC 7 cut(s) 61, 65, 163, 770, 773, 862, 1070
BccI CCATC 4 cut(s) 900, 1148, 1368, 1385
BceAI ACGGC 1 cut(s) 749
BciT130I CCWGG 1 cut(s) 749
BciVI GTATCC 3 cut(s) 205, 240, 475
BcnI CCSGG 1 cut(s) 1302
BcoDI GTCTC 2 cut(s) 774, 927
BfaI CTAG 1 cut(s) 440
BfmI CTRYAG 3 cut(s) 51, 258, 876
BfrI CTTAAG 1 cut(s) 1007
BfuI GTATCC 3 cut(s) 205, 240, 475
BglII AGATCT 1 cut(s) 559
BisI GCNGC 8 cut(s) 54, 75, 86, 177, 759, 762, 876, 1059
BlsI GCNGC 8 cut(s) 55, 76, 87, 178, 760, 763, 877, 1060
BmcAI AGTACT 1 cut(s) 256
Bme1390I CCNGG 2 cut(s) 749, 1302
Bme18I GGWCC 3 cut(s) 197, 538, 916
BmeT110I CYCGRG 3 cut(s) 233, 1313, 1584
BmgT120I GGNCC 4 cut(s) 197, 538, 916, 1169
BmiI GGNNCC 2 cut(s) 89, 918
BmrFI CCNGG 2 cut(s) 749, 1302
BmsI GCATC 5 cut(s) 319, 803, 844, 862, 1345
BpiI GAAGAC 1 cut(s) 1559
BpuEI CTTGAG 1 cut(s) 474
BpuMI CCSGG 1 cut(s) 1302
BsaBI GATNNNNATC 2 cut(s) 279, 1359
BsaHI GRCGYC 1 cut(s) 1556
BsaJI CCNNGG 2 cut(s) 617, 1073
BsaWI WCCGGW 4 cut(s) 65, 111, 303, 698
Bsc4I CCNNNNNNNGG 3 cut(s) 84, 111, 547
Bse118I RCCGGY 2 cut(s) 65, 698
Bse1I ACTGG 3 cut(s) 163, 839, 1256
Bse3DI GCAATG 1 cut(s) 1389
Bse8I GATNNNNATC 2 cut(s) 279, 1359
BseAI TCCGGA 1 cut(s) 303
BseBI CCWGG 1 cut(s) 749
BseDI CCNNGG 2 cut(s) 617, 1073
BseGI GGATG 4 cut(s) 877, 911, 1090, 1396
BseJI GATNNNNATC 2 cut(s) 279, 1359
BseLI CCNNNNNNNGG 3 cut(s) 84, 111, 547
BseMI GCAATG 1 cut(s) 1389
BseMII CTCAG 4 cut(s) 371, 708, 1378, 1536
BseNI ACTGG 3 cut(s) 163, 839, 1256
BseRI GAGGAG 1 cut(s) 17
BseXI GCAGC 7 cut(s) 61, 65, 163, 770, 773, 862, 1070
BsgI GTGCAG 1 cut(s) 31
Bsh1236I CGCG 1 cut(s) 85
BshFI GGCC 1 cut(s) 1170
BshNI GGYRCC 1 cut(s) 87
BshTI ACCGGT 2 cut(s) 65, 698
BsiHKCI CYCGRG 3 cut(s) 233, 1313, 1584
BsiSI CCGG 6 cut(s) 66, 112, 125, 304, 699, 1302
BslFI GGGAC 1 cut(s) 727
BslI CCNNNNNNNGG 3 cut(s) 84, 111, 547
BsmAI GTCTC 2 cut(s) 774, 927
BsmFI GGGAC 1 cut(s) 727
BsnI GGCC 1 cut(s) 1170
BsoBI CYCGRG 3 cut(s) 233, 1313, 1584
Bsp13I TCCGGA 1 cut(s) 303
Bsp1407I TGTACA 1 cut(s) 774
Bsp143I GATC 6 cut(s) 559, 600, 810, 1252, 1297, 1330
Bsp19I CCATGG 1 cut(s) 617
BspACI CCGC 1 cut(s) 85
BspANI GGCC 1 cut(s) 1170
BspCNI CTCAG 4 cut(s) 372, 709, 1377, 1535
BspEI TCCGGA 1 cut(s) 303
BspFNI CGCG 1 cut(s) 85
BspLI GGNNCC 2 cut(s) 89, 918
BspMAI CTGCAG 3 cut(s) 55, 262, 880
BspPI GGATC 3 cut(s) 608, 1247, 1292
BspQI GCTCTTC 1 cut(s) 106
BspT107I GGYRCC 1 cut(s) 87
BspTI CTTAAG 1 cut(s) 1007
BsrDI GCAATG 1 cut(s) 1389
BsrFI RCCGGY 2 cut(s) 65, 698
BsrGI TGTACA 1 cut(s) 774
BsrI ACTGG 3 cut(s) 163, 839, 1256
BssAI RCCGGY 2 cut(s) 65, 698
BssECI CCNNGG 2 cut(s) 617, 1073
BssMI GATC 6 cut(s) 559, 600, 810, 1252, 1297, 1330
BssNI GRCGYC 1 cut(s) 1556
BssT1I CCWWGG 1 cut(s) 617
Bst2UI CCWGG 1 cut(s) 749
Bst4CI ACNGT 3 cut(s) 92, 254, 449
Bst6I CTCTTC 1 cut(s) 106
BstACI GRCGYC 1 cut(s) 1556
BstAFI CTTAAG 1 cut(s) 1007
BstAPI GCANNNNNTGC 1 cut(s) 884
BstAUI TGTACA 1 cut(s) 774
BstC8I GCNNGC 5 cut(s) 79, 83, 130, 950, 1528
BstDEI CTNAG 5 cut(s) 380, 521, 717, 1364, 1522
BstDSI CCRYGG 1 cut(s) 617
BstF5I GGATG 4 cut(s) 877, 911, 1090, 1396
BstFNI CGCG 1 cut(s) 85
BstHHI GCGC 1 cut(s) 661
BstKTI GATC 6 cut(s) 562, 603, 813, 1255, 1300, 1333
BstMAI GTCTC 2 cut(s) 774, 927
BstMBI GATC 6 cut(s) 559, 600, 810, 1252, 1297, 1330
BstMWI GCNNNNNNNGC 6 cut(s) 155, 266, 758, 884, 1055, 1067
BstNI CCWGG 1 cut(s) 749
BstNSI RCATGY 1 cut(s) 952
BstSCI CCNGG 2 cut(s) 747, 1300
BstSFI CTRYAG 3 cut(s) 51, 258, 876
BstUI CGCG 1 cut(s) 85
BstV1I GCAGC 7 cut(s) 61, 65, 163, 770, 773, 862, 1070
BstV2I GAAGAC 1 cut(s) 1559
BstX2I RGATCY 1 cut(s) 559
BstXI CCANNNNNNTGG 1 cut(s) 207
BstYI RGATCY 1 cut(s) 559
BsuI GTATCC 3 cut(s) 205, 240, 475
BsuRI GGCC 1 cut(s) 1170
BtgI CCRYGG 1 cut(s) 617
BtgZI GCGATG 1 cut(s) 269
BtsCI GGATG 4 cut(s) 877, 911, 1090, 1396
BtsI GCAGTG 2 cut(s) 48, 1044
BtsIMutI CAGTG 5 cut(s) 48, 517, 1044, 1149, 1269
Cac8I GCNNGC 5 cut(s) 79, 83, 130, 950, 1528
CaiI CAGNNNCTG 1 cut(s) 716
CfoI GCGC 1 cut(s) 661
Cfr10I RCCGGY 2 cut(s) 65, 698
Cfr13I GGNCC 4 cut(s) 197, 538, 916, 1169
CseI GACGC 1 cut(s) 1133
Csp6I GTAC 4 cut(s) 255, 455, 696, 775
CspAI ACCGGT 2 cut(s) 65, 698
CviAII CATG 5 cut(s) 351, 618, 755, 949, 1000
CviQI GTAC 4 cut(s) 255, 455, 696, 775
DdeI CTNAG 5 cut(s) 380, 521, 717, 1364, 1522
DpnI GATC 6 cut(s) 561, 602, 812, 1254, 1299, 1332
DpnII GATC 6 cut(s) 559, 600, 810, 1252, 1297, 1330
DrdI GACNNNNNNGTC 1 cut(s) 1130
DseDI GACNNNNNNGTC 1 cut(s) 1130
Eam1104I CTCTTC 1 cut(s) 106
EarI CTCTTC 1 cut(s) 106
Eco130I CCWWGG 1 cut(s) 617
Eco32I GATATC 2 cut(s) 301, 956
Eco47I GGWCC 3 cut(s) 197, 538, 916
Eco57I CTGAAG 1 cut(s) 1532
Eco88I CYCGRG 3 cut(s) 233, 1313, 1584
EcoRI GAATTC 1 cut(s) 506
EcoRII CCWGG 1 cut(s) 747
EcoRV GATATC 2 cut(s) 301, 956
EcoT14I CCWWGG 1 cut(s) 617
ErhI CCWWGG 1 cut(s) 617
FaeI CATG 5 cut(s) 354, 621, 758, 952, 1003
FaqI GGGAC 1 cut(s) 727
FatI CATG 5 cut(s) 350, 617, 754, 948, 999
Fnu4HI GCNGC 8 cut(s) 54, 75, 86, 177, 759, 762, 876, 1059
FokI GGATG 4 cut(s) 884, 918, 1077, 1403
Fsp4HI GCNGC 8 cut(s) 54, 75, 86, 177, 759, 762, 876, 1059
FspBI CTAG 1 cut(s) 440
GlaI GCGC 1 cut(s) 660
GluI GCNGC 8 cut(s) 54, 75, 86, 177, 759, 762, 876, 1059
HaeIII GGCC 1 cut(s) 1170
HapII CCGG 6 cut(s) 66, 112, 125, 304, 699, 1302
HgaI GACGC 1 cut(s) 1133
HhaI GCGC 1 cut(s) 661
Hin1I GRCGYC 1 cut(s) 1556
Hin1II CATG 5 cut(s) 354, 621, 758, 952, 1003
Hin6I GCGC 1 cut(s) 659
HinP1I GCGC 1 cut(s) 659
HinfI GANTC 6 cut(s) 405, 707, 995, 1319, 1467, 1500
HpaII CCGG 6 cut(s) 66, 112, 125, 304, 699, 1302
HphI GGTGA 2 cut(s) 593, 976
Hpy166II GTNNAC 3 cut(s) 394, 538, 1036
Hpy188I TCNGA 7 cut(s) 11, 143, 676, 690, 815, 853, 1551
Hpy188III TCNNGA 9 cut(s) 233, 304, 357, 497, 1205, 1217, 1537, 1584, 1586
Hpy8I GTNNAC 3 cut(s) 394, 538, 1036
HpyAV CCTTC 6 cut(s) 164, 179, 395, 796, 1202, 1381
HpyCH4III ACNGT 3 cut(s) 92, 254, 449
HpyCH4IV ACGT 6 cut(s) 605, 653, 883, 1150, 1266, 1556
HpyF10VI GCNNNNNNNGC 6 cut(s) 155, 266, 758, 884, 1055, 1067
HpyF3I CTNAG 5 cut(s) 380, 521, 717, 1364, 1522
HpySE526I ACGT 6 cut(s) 605, 653, 883, 1150, 1266, 1556
Hsp92I GRCGYC 1 cut(s) 1556
Hsp92II CATG 5 cut(s) 354, 621, 758, 952, 1003
HspAI GCGC 1 cut(s) 659
Kpn2I TCCGGA 1 cut(s) 303
Kzo9I GATC 6 cut(s) 559, 600, 810, 1252, 1297, 1330
LguI GCTCTTC 1 cut(s) 106
LmnI GCTCC 2 cut(s) 114, 621
Lsp1109I GCAGC 7 cut(s) 61, 65, 163, 770, 773, 862, 1070
LweI GCATC 5 cut(s) 319, 803, 844, 862, 1345
MaeI CTAG 1 cut(s) 440
MaeII ACGT 6 cut(s) 605, 653, 883, 1150, 1266, 1556
MaeIII GTNAC 7 cut(s) 58, 92, 363, 463, 581, 1267, 1454
MalI GATC 6 cut(s) 561, 602, 812, 1254, 1299, 1332
MboI GATC 6 cut(s) 559, 600, 810, 1252, 1297, 1330
MboII GAAGA 7 cut(s) 93, 250, 308, 512, 1004, 1538, 1564
MflI RGATCY 1 cut(s) 559
MlyI GAGTC 1 cut(s) 1494
MroI TCCGGA 1 cut(s) 303
MroXI GAANNNNTTC 2 cut(s) 148, 1212
MseI TTAA 9 cut(s) 20, 608, 927, 1008, 1080, 1284, 1398, 1563, 1603
MspA1I CMGCKG 2 cut(s) 56, 1526
MspCI CTTAAG 1 cut(s) 1007
MspI CCGG 6 cut(s) 66, 112, 125, 304, 699, 1302
MspR9I CCNGG 2 cut(s) 749, 1302
MvaI CCWGG 1 cut(s) 749
MvnI CGCG 1 cut(s) 85
MwoI GCNNNNNNNGC 6 cut(s) 155, 266, 758, 884, 1055, 1067
NciI CCSGG 1 cut(s) 1302
NcoI CCATGG 1 cut(s) 617
NdeII GATC 6 cut(s) 559, 600, 810, 1252, 1297, 1330
NlaIII CATG 5 cut(s) 354, 621, 758, 952, 1003
NlaIV GGNNCC 2 cut(s) 89, 918
NmuCI GTSAC 4 cut(s) 58, 92, 581, 1267
NspI RCATGY 1 cut(s) 952
PaeI GCATGC 1 cut(s) 952
PaeR7I CTCGAG 2 cut(s) 1313, 1584
PciSI GCTCTTC 1 cut(s) 106
PdmI GAANNNNTTC 2 cut(s) 148, 1212
PfeI GAWTC 5 cut(s) 405, 707, 995, 1319, 1467
PfoI TCCNGGA 1 cut(s) 1300
PinAI ACCGGT 2 cut(s) 65, 698
PkrI GCNGC 8 cut(s) 55, 76, 87, 178, 760, 763, 877, 1060
PleI GAGTC 1 cut(s) 1494
PpsI GAGTC 1 cut(s) 1494
Psp1406I AACGTT 1 cut(s) 653
Psp6I CCWGG 1 cut(s) 747
PspGI CCWGG 1 cut(s) 747
PspN4I GGNNCC 2 cut(s) 89, 918
PspPI GGNCC 4 cut(s) 197, 538, 916, 1169
PspXI VCTCGAGB 1 cut(s) 1313
PstI CTGCAG 3 cut(s) 55, 262, 880
PstNI CAGNNNCTG 1 cut(s) 716
PsuI RGATCY 1 cut(s) 559
PvuII CAGCTG 2 cut(s) 56, 1526
RsaI GTAC 4 cut(s) 256, 456, 697, 776
RsaNI GTAC 4 cut(s) 255, 455, 696, 775
SapI GCTCTTC 1 cut(s) 106
SaqAI TTAA 9 cut(s) 20, 608, 927, 1008, 1080, 1284, 1398, 1563, 1603
SatI GCNGC 8 cut(s) 54, 75, 86, 177, 759, 762, 876, 1059
Sau3AI GATC 6 cut(s) 559, 600, 810, 1252, 1297, 1330
Sau96I GGNCC 4 cut(s) 197, 538, 916, 1169
ScaI AGTACT 1 cut(s) 256
SchI GAGTC 1 cut(s) 1494
ScrFI CCNGG 2 cut(s) 749, 1302
SfaNI GCATC 5 cut(s) 319, 803, 844, 862, 1345
SfcI CTRYAG 3 cut(s) 51, 258, 876
Sfr274I CTCGAG 2 cut(s) 1313, 1584
SinI GGWCC 3 cut(s) 197, 538, 916
SlaI CTCGAG 2 cut(s) 1313, 1584
SmlI CTYRAG 4 cut(s) 489, 1007, 1313, 1584
SmoI CTYRAG 4 cut(s) 489, 1007, 1313, 1584
SphI GCATGC 1 cut(s) 952
SsiI CCGC 1 cut(s) 85
SspMI CTAG 1 cut(s) 440
StyD4I CCNGG 2 cut(s) 747, 1300
StyI CCWWGG 1 cut(s) 617
TaaI ACNGT 3 cut(s) 92, 254, 449
TaiI ACGT 6 cut(s) 608, 656, 886, 1153, 1269, 1559
TaqI TCGA 3 cut(s) 1216, 1314, 1585
TatI WGTACW 2 cut(s) 254, 774
TauI GCSGC 1 cut(s) 88
TfiI GAWTC 5 cut(s) 405, 707, 995, 1319, 1467
Tru1I TTAA 9 cut(s) 20, 608, 927, 1008, 1080, 1284, 1398, 1563, 1603
Tru9I TTAA 9 cut(s) 20, 608, 927, 1008, 1080, 1284, 1398, 1563, 1603
TscAI CASTG 5 cut(s) 55, 517, 1051, 1149, 1276
TseFI GTSAC 4 cut(s) 58, 92, 581, 1267
TseI GCWGC 7 cut(s) 53, 74, 176, 758, 761, 875, 1058
Tsp45I GTSAC 4 cut(s) 58, 92, 581, 1267
TspDTI ATGAA 9 cut(s) 141, 183, 198, 326, 339, 464, 519, 1015, 1400
TspGWI ACGGA 2 cut(s) 945, 1293
TspRI CASTG 5 cut(s) 55, 517, 1051, 1149, 1276
Vha464I CTTAAG 1 cut(s) 1007
VpaK11BI GGWCC 3 cut(s) 197, 538, 916
XapI RAATTY 4 cut(s) 506, 575, 980, 1540
XceI RCATGY 1 cut(s) 952
XhoI CTCGAG 2 cut(s) 1313, 1584
XmnI GAANNNNTTC 2 cut(s) 148, 1212
XspI CTAG 1 cut(s) 440
ZraI GACGTC 1 cut(s) 1557
ZrmI AGTACT 1 cut(s) 256
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.