Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0000117

Physical Location & Seq

Genomic Coordinates Reverse (-)

5522389 .. 5525485

Gene Structure 3097 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1068200.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1533 bp

ATGGCAATGAGGTTACAGTCACTGCTGTTGGGTGTGCTACTACTAACTGGCTTTGCAGCGGGAGATAGTAAAACTACTGCTGTTATACCTAGTCGTTATAGCAGTGCTTCCCTGAACAGAAGCAGTTTTCCATCAGGCTTTGTATTTGGTTCAGCTTCAGCATCTTACCAATATGAAGGTGCATGGGATGAAGGTGGTAAAGGACCAAGCATATGGGATAACTTCACCCACCAGTATCCAGAAAAAATCATTGATGGAAGCAACGGGGACGTGGCTGATGATCAATACCACCGCTATAAGGAAGATGTAAAGATTTTGAAGGATATGGGATTGGATGCTTATAGGTTCTCTATCTCATGGTCCAGATTGTTACCAAATGGAAAGCTAAGTGGGGGTGTGAACAAGGAAGGAGTACAATACTACAACAATCTCATCAATGAACTCCTAAACAAAGGTGTAACGCCATATGCGACAATCTTTCATTGGGATCTTCCTCAAGCTTTAGAAGAAGAATATGGTGGTTTCTTAAACCGTCAAATTGTCAATCATTTTCGAGACTACGCAGAACTTTGCTTTAAGTTATTTGGCGATCGAGTAAAGCATTGGATCACACTAAATGAGCCATATACTTTTATTACTTTTGGCTATGCATCAGGAGAATTAGCACCCGGGCGATGTTCTGCTTGGCAGAACTTAAACTGCACCGGCGGTGATTCGGCTACCGAACCCTATATAGTAGCACACCACTTCCTCCTCGCTCATGCACATGCTGTTAAAGTGTACAAGACTAAATATCAGGCATCTCAAGAAGGCGTGATAGGAATAACATTAGCGACAAATTGGTTTGTGCCGATTTCTAACGCAACGCGTCATCGGAATGCTGCAAATCGATCTTTGGATTTTATGTTTATGGAGCCATTGACAAGCGGCCAATATCCGCACAGTATGCAAGTTCTTGTTAAAGAAAGATTACCTAAATTTACACAAGAAGAATCCAAGTTAATAAAAGGGTCATTTGATTTTGTTGGAATGAATTATTATACTACTCACTATTCAAGCGATCAACCTCATAATAATTCTGCAAATGCAAGCTTCCTGACCGATGCTCGCGTTTTTGAATCAACCGAGCTTAATGGAGTCCCCATTGGTCCTCCGGCTGCTTCAAGCTGGCTAGTTATTTATCCAAAAGGCATTCGAGAGATTTTACTCTACGCAAAGCACAAATATAATAATCCGCTCATTTACATTACTGAGAACGGCCTTGACGAGTTCGATGATCCCACATTGTCACTTCCGCAATCCCTCAATGATACCCACAGAATTGATTACCACTACCACCACCTCGACTATCTTCGAAAAGCAATCAATGATGGTGTAAATGTGAAGGGATACTTTGCATGGTCATTGCTGGACAATTTTGAATGGGCTTCTGGATACACCTTACGATTTGGTTTCGTCTATATAGATTACAATGATGGACTTAAGAGGCACCCAAAACTCTCAGCAAGCTGGTTCAAATGTTTCCTTGGATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0008150 GO:0008152 GO:0008422 GO:0015926 GO:0016787 GO:0016798 GO:0071704 GO:1901135 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_1

Protein Analysis

511

Amino Acids

57.77

Weight (kDa)

6.34

Isoelectric Point (pI)

30.33

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_1	PF00232	41 - 506	2e-159	Glycosyl hydrolase family 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca	FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica	MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica	Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis	pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis	RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata	RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora	Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa	Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha	Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana	Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1488
AccBSI	CCGCTC	1 cut(s)	1237
AccII	CGCG	2 cut(s)	868, 1110
AciI	CCGC	7 cut(s)	59, 292, 708, 927, 938, 1235, 1295
AclWI	GGATC	3 cut(s)	495, 614, 1271
AcoI	YGGCCR	1 cut(s)	928
AcsI	RAATTY	1 cut(s)	977
AcuI	CTGAAG	1 cut(s)	141
AfaI	GTAC	2 cut(s)	414, 782
AfiI	CCNNNNNNNGG	1 cut(s)	298
AflII	CTTAAG	1 cut(s)	1481
AflIII	ACRYGT	1 cut(s)	866
AgsI	TTSAA	6 cut(s)	319, 1056, 1118, 1164, 1421, 1516
AjiI	CACGTC	1 cut(s)	271
AluBI	AGCT	7 cut(s)	155, 385, 500, 1092, 1129, 1167, 1509
AluI	AGCT	7 cut(s)	155, 385, 500, 1092, 1129, 1167, 1509
Alw26I	GTCTC	1 cut(s)	549
AlwI	GGATC	3 cut(s)	495, 614, 1271
AlwNI	CAGNNNCTG	1 cut(s)	22
Ama87I	CYCGRG	1 cut(s)	668
AoxI	GGCC	2 cut(s)	928, 1258
ApeKI	GCWGC	3 cut(s)	56, 881, 1157
ApoI	RAATTY	1 cut(s)	977
AspS9I	GGNCC	3 cut(s)	203, 360, 1148
AsuC2I	CCSGG	2 cut(s)	669, 670
AsuHPI	GGTGA	2 cut(s)	217, 722
AsuII	TTCGAA	1 cut(s)	1354
AvaI	CYCGRG	1 cut(s)	668
AvaII	GGWCC	3 cut(s)	203, 360, 1148
BanI	GGYRCC	1 cut(s)	1488
BbvI	GCAGC	3 cut(s)	68, 868, 1144
BccI	CCATC	4 cut(s)	139, 248, 1364, 1469
BceAI	ACGGC	1 cut(s)	1273
BciVI	GTATCC	3 cut(s)	246, 1382, 1427
BclI	TGATCA	1 cut(s)	280
BcnI	CCSGG	2 cut(s)	669, 670
BcoDI	GTCTC	1 cut(s)	549
BfaI	CTAG	2 cut(s)	90, 1172
BfrI	CTTAAG	1 cut(s)	1481
BfuI	GTATCC	3 cut(s)	246, 1382, 1427
BisI	GCNGC	4 cut(s)	57, 882, 928, 1158
BlsI	GCNGC	4 cut(s)	58, 883, 929, 1159
Bme1390I	CCNGG	2 cut(s)	669, 670
Bme18I	GGWCC	3 cut(s)	203, 360, 1148
BmeT110I	CYCGRG	1 cut(s)	668
BmgBI	CACGTC	1 cut(s)	271
BmgT120I	GGNCC	3 cut(s)	203, 360, 1148
BmiI	GGNNCC	2 cut(s)	915, 1490
BmrFI	CCNGG	2 cut(s)	669, 670
BmsI	GCATC	5 cut(s)	170, 325, 659, 809, 1093
Bpu14I	TTCGAA	1 cut(s)	1354
BpuEI	CTTGAG	2 cut(s)	480, 789
BpuMI	CCSGG	2 cut(s)	669, 670
Bsa29I	ATCGAT	1 cut(s)	889
BsaJI	CCNNGG	2 cut(s)	668, 1525
Bsc4I	CCNNNNNNNGG	1 cut(s)	298
Bse118I	RCCGGY	1 cut(s)	704
Bse1I	ACTGG	2 cut(s)	52, 232
Bse3DI	GCAATG	2 cut(s)	12, 1403
BseCI	ATCGAT	1 cut(s)	889
BseDI	CCNNGG	2 cut(s)	668, 1525
BseGI	GGATG	2 cut(s)	193, 340
BseLI	CCNNNNNNNGG	1 cut(s)	298
BseMI	GCAATG	2 cut(s)	12, 1403
BseMII	CTCAG	2 cut(s)	1242, 1515
BseNI	ACTGG	2 cut(s)	52, 232
BseRI	GAGGAG	1 cut(s)	743
BseXI	GCAGC	3 cut(s)	68, 868, 1144
BsgI	GTGCAG	1 cut(s)	685
Bsh1236I	CGCG	2 cut(s)	868, 1110
Bsh1285I	CGRYCG	1 cut(s)	592
BshFI	GGCC	2 cut(s)	930, 1260
BshNI	GGYRCC	1 cut(s)	1488
BshVI	ATCGAT	1 cut(s)	889
BsiEI	CGRYCG	1 cut(s)	592
BsiHKCI	CYCGRG	1 cut(s)	668
BsiSI	CCGG	3 cut(s)	669, 705, 1154
BslFI	GGGAC	2 cut(s)	281, 1124
BslI	CCNNNNNNNGG	1 cut(s)	298
BsmAI	GTCTC	1 cut(s)	549
BsmFI	GGGAC	2 cut(s)	281, 1124
BsmI	GAATGC	2 cut(s)	883, 1191
BsnI	GGCC	2 cut(s)	930, 1260
BsoBI	CYCGRG	1 cut(s)	668
Bsp119I	TTCGAA	1 cut(s)	1354
Bsp1407I	TGTACA	1 cut(s)	780
Bsp143I	GATC	7 cut(s)	280, 487, 589, 606, 890, 1060, 1276
BspACI	CCGC	7 cut(s)	59, 292, 708, 927, 938, 1235, 1295
BspANI	GGCC	2 cut(s)	930, 1260
BspCNI	CTCAG	2 cut(s)	1243, 1514
BspDI	ATCGAT	1 cut(s)	889
BspFNI	CGCG	2 cut(s)	868, 1110
BspLI	GGNNCC	2 cut(s)	915, 1490
BspPI	GGATC	3 cut(s)	495, 614, 1271
BspT104I	TTCGAA	1 cut(s)	1354
BspT107I	GGYRCC	1 cut(s)	1488
BspTI	CTTAAG	1 cut(s)	1481
BsrBI	CCGCTC	1 cut(s)	1237
BsrDI	GCAATG	2 cut(s)	12, 1403
BsrFI	RCCGGY	1 cut(s)	704
BsrGI	TGTACA	1 cut(s)	780
BsrI	ACTGG	2 cut(s)	52, 232
BssAI	RCCGGY	1 cut(s)	704
BssECI	CCNNGG	2 cut(s)	668, 1525
BssMI	GATC	7 cut(s)	280, 487, 589, 606, 890, 1060, 1276
BssT1I	CCWWGG	1 cut(s)	1525
Bst4CI	ACNGT	3 cut(s)	18, 533, 944
BstAFI	CTTAAG	1 cut(s)	1481
BstAPI	GCANNNNNTGC	1 cut(s)	946
BstAUI	TGTACA	1 cut(s)	780
BstBI	TTCGAA	1 cut(s)	1354
BstC8I	GCNNGC	4 cut(s)	1090, 1108, 1169, 1507
BstDEI	CTNAG	3 cut(s)	386, 1251, 1501
BstF5I	GGATG	2 cut(s)	193, 340
BstFNI	CGCG	2 cut(s)	868, 1110
BstKTI	GATC	7 cut(s)	283, 490, 592, 609, 893, 1063, 1279
BstMAI	GTCTC	1 cut(s)	549
BstMBI	GATC	7 cut(s)	280, 487, 589, 606, 890, 1060, 1276
BstMCI	CGRYCG	1 cut(s)	592
BstMWI	GCNNNNNNNGC	1 cut(s)	946
BstNSI	RCATGY	1 cut(s)	770
BstSCI	CCNGG	2 cut(s)	667, 668
BstUI	CGCG	2 cut(s)	868, 1110
BstV1I	GCAGC	3 cut(s)	68, 868, 1144
BstX2I	RGATCY	1 cut(s)	487
BstXI	CCANNNNNNTGG	1 cut(s)	213
BstYI	RGATCY	1 cut(s)	487
Bsu15I	ATCGAT	1 cut(s)	889
BsuI	GTATCC	3 cut(s)	246, 1382, 1427
BsuRI	GGCC	2 cut(s)	930, 1260
BsuTUI	ATCGAT	1 cut(s)	889
BtgZI	GCGATG	1 cut(s)	688
BtrI	CACGTC	1 cut(s)	271
BtsCI	GGATG	2 cut(s)	193, 340
BtsI	GCAGTG	2 cut(s)	20, 109
BtsIMutI	CAGTG	2 cut(s)	20, 109
Cac8I	GCNNGC	4 cut(s)	1090, 1108, 1169, 1507
CaiI	CAGNNNCTG	1 cut(s)	22
Cfr10I	RCCGGY	1 cut(s)	704
Cfr13I	GGNCC	3 cut(s)	203, 360, 1148
Cfr9I	CCCGGG	1 cut(s)	668
ClaI	ATCGAT	1 cut(s)	889
CseI	GACGC	1 cut(s)	857
Csp6I	GTAC	2 cut(s)	413, 781
CviAII	CATG	5 cut(s)	183, 357, 761, 767, 1398
CviQI	GTAC	2 cut(s)	413, 781
DdeI	CTNAG	3 cut(s)	386, 1251, 1501
DpnI	GATC	7 cut(s)	282, 489, 591, 608, 892, 1062, 1278
DpnII	GATC	7 cut(s)	280, 487, 589, 606, 890, 1060, 1276
EaeI	YGGCCR	1 cut(s)	928
Eco130I	CCWWGG	1 cut(s)	1525
Eco47I	GGWCC	3 cut(s)	203, 360, 1148
Eco57I	CTGAAG	1 cut(s)	141
Eco88I	CYCGRG	1 cut(s)	668
EcoT14I	CCWWGG	1 cut(s)	1525
EcoT22I	ATGCAT	1 cut(s)	652
ErhI	CCWWGG	1 cut(s)	1525
FaeI	CATG	5 cut(s)	186, 360, 764, 770, 1401
FalI	AAGNNNNNCTT	2 cut(s)	1376, 1408
FaqI	GGGAC	2 cut(s)	281, 1124
FatI	CATG	5 cut(s)	182, 356, 760, 766, 1397
FauI	CCCGC	1 cut(s)	52
FauNDI	CATATG	2 cut(s)	212, 466
FbaI	TGATCA	1 cut(s)	280
Fnu4HI	GCNGC	4 cut(s)	57, 882, 928, 1158
FokI	GGATG	2 cut(s)	200, 347
Fsp4HI	GCNGC	4 cut(s)	57, 882, 928, 1158
FspBI	CTAG	2 cut(s)	90, 1172
GluI	GCNGC	4 cut(s)	57, 882, 928, 1158
HaeIII	GGCC	2 cut(s)	930, 1260
HapII	CCGG	3 cut(s)	669, 705, 1154
HgaI	GACGC	1 cut(s)	857
Hin1II	CATG	5 cut(s)	186, 360, 764, 770, 1401
HindIII	AAGCTT	2 cut(s)	498, 1090
HinfI	GANTC	4 cut(s)	713, 992, 1118, 1137
HpaII	CCGG	3 cut(s)	669, 705, 1154
HphI	GGTGA	2 cut(s)	217, 722
Hpy166II	GTNNAC	2 cut(s)	400, 781
Hpy188I	TCNGA	1 cut(s)	876
Hpy188III	TCNNGA	8 cut(s)	239, 363, 554, 654, 806, 1096, 1196, 1431
Hpy8I	GTNNAC	2 cut(s)	400, 781
HpyAV	CCTTC	6 cut(s)	170, 185, 313, 401, 803, 1378
HpyCH4III	ACNGT	3 cut(s)	18, 533, 944
HpyCH4IV	ACGT	1 cut(s)	270
HpyF10VI	GCNNNNNNNGC	1 cut(s)	946
HpyF3I	CTNAG	3 cut(s)	386, 1251, 1501
HpySE526I	ACGT	1 cut(s)	270
Hsp92II	CATG	5 cut(s)	186, 360, 764, 770, 1401
Ksp22I	TGATCA	1 cut(s)	280
Kzo9I	GATC	7 cut(s)	280, 487, 589, 606, 890, 1060, 1276
LmnI	GCTCC	1 cut(s)	913
Lsp1109I	GCAGC	3 cut(s)	68, 868, 1144
LweI	GCATC	5 cut(s)	170, 325, 659, 809, 1093
MaeI	CTAG	2 cut(s)	90, 1172
MaeII	ACGT	1 cut(s)	270
MaeIII	GTNAC	5 cut(s)	12, 18, 369, 457, 1287
MalI	GATC	7 cut(s)	282, 489, 591, 608, 892, 1062, 1278
MbiI	CCGCTC	1 cut(s)	1237
MboI	GATC	7 cut(s)	280, 487, 589, 606, 890, 1060, 1276
MboII	GAAGA	6 cut(s)	314, 482, 518, 521, 1001, 1343
MflI	RGATCY	1 cut(s)	487
MluCI	AATT	8 cut(s)	537, 659, 838, 977, 1033, 1075, 1320, 1414
MluI	ACGCGT	1 cut(s)	866
MlyI	GAGTC	1 cut(s)	1146
MmeI	TCCRAC	1 cut(s)	1006
MnlI	CCTC	9 cut(s)	3, 504, 761, 764, 1077, 1161, 1313, 1352, 1479
Mph1103I	ATGCAT	1 cut(s)	652
MseI	TTAA	8 cut(s)	527, 576, 695, 774, 960, 1001, 1131, 1482
MslI	CAYNNNNRTG	2 cut(s)	765, 876
MspA1I	CMGCKG	1 cut(s)	59
MspCI	CTTAAG	1 cut(s)	1481
MspI	CCGG	3 cut(s)	669, 705, 1154
MspR9I	CCNGG	2 cut(s)	669, 670
Mva1269I	GAATGC	2 cut(s)	883, 1191
MvnI	CGCG	2 cut(s)	868, 1110
MwoI	GCNNNNNNNGC	1 cut(s)	946
NciI	CCSGG	2 cut(s)	669, 670
NdeI	CATATG	2 cut(s)	212, 466
NdeII	GATC	7 cut(s)	280, 487, 589, 606, 890, 1060, 1276
NlaIII	CATG	5 cut(s)	186, 360, 764, 770, 1401
NlaIV	GGNNCC	2 cut(s)	915, 1490
NmuCI	GTSAC	2 cut(s)	18, 1287
NsiI	ATGCAT	1 cut(s)	652
NspI	RCATGY	1 cut(s)	770
NspV	TTCGAA	1 cut(s)	1354
PcsI	WCGNNNNNNNCGW	2 cut(s)	467, 1263
PctI	GAATGC	2 cut(s)	883, 1191
PfeI	GAWTC	3 cut(s)	713, 992, 1118
PkrI	GCNGC	4 cut(s)	58, 883, 929, 1159
Ple19I	CGATCG	1 cut(s)	592
PleI	GAGTC	1 cut(s)	1145
PpsI	GAGTC	1 cut(s)	1145
PspN4I	GGNNCC	2 cut(s)	915, 1490
PspPI	GGNCC	3 cut(s)	203, 360, 1148
PstNI	CAGNNNCTG	1 cut(s)	22
PsuI	RGATCY	1 cut(s)	487
PvuI	CGATCG	1 cut(s)	592
RsaI	GTAC	2 cut(s)	414, 782
RsaNI	GTAC	2 cut(s)	413, 781
RseI	CAYNNNNRTG	2 cut(s)	765, 876
SaqAI	TTAA	8 cut(s)	527, 576, 695, 774, 960, 1001, 1131, 1482
SatI	GCNGC	4 cut(s)	57, 882, 928, 1158
Sau3AI	GATC	7 cut(s)	280, 487, 589, 606, 890, 1060, 1276
Sau96I	GGNCC	3 cut(s)	203, 360, 1148
SchI	GAGTC	1 cut(s)	1146
ScrFI	CCNGG	2 cut(s)	669, 670
SfaNI	GCATC	5 cut(s)	170, 325, 659, 809, 1093
SfuI	TTCGAA	1 cut(s)	1354
SgrAI	CRCCGGYG	1 cut(s)	704
SinI	GGWCC	3 cut(s)	203, 360, 1148
SmaI	CCCGGG	1 cut(s)	670
SmiMI	CAYNNNNRTG	2 cut(s)	765, 876
SmlI	CTYRAG	3 cut(s)	495, 804, 1481
SmoI	CTYRAG	3 cut(s)	495, 804, 1481
Sse9I	AATT	8 cut(s)	537, 659, 838, 977, 1033, 1075, 1320, 1414
SsiI	CCGC	7 cut(s)	59, 292, 708, 927, 938, 1235, 1295
SspMI	CTAG	2 cut(s)	90, 1172
StyD4I	CCNGG	2 cut(s)	667, 668
StyI	CCWWGG	1 cut(s)	1525
TaaI	ACNGT	3 cut(s)	18, 533, 944
TaiI	ACGT	1 cut(s)	273
TaqI	TCGA	7 cut(s)	553, 592, 889, 1195, 1272, 1344, 1354
TaqII	GACCGA	1 cut(s)	1115
TasI	AATT	8 cut(s)	537, 659, 838, 977, 1033, 1075, 1320, 1414
TatI	WGTACW	2 cut(s)	412, 780
TauI	GCSGC	1 cut(s)	930
TfiI	GAWTC	3 cut(s)	713, 992, 1118
Tru1I	TTAA	8 cut(s)	527, 576, 695, 774, 960, 1001, 1131, 1482
Tru9I	TTAA	8 cut(s)	527, 576, 695, 774, 960, 1001, 1131, 1482
TscAI	CASTG	2 cut(s)	27, 109
TseFI	GTSAC	2 cut(s)	18, 1287
TseI	GCWGC	3 cut(s)	56, 881, 1157
Tsp45I	GTSAC	2 cut(s)	18, 1287
TspDTI	ATGAA	5 cut(s)	189, 204, 453, 470, 1046
TspMI	CCCGGG	1 cut(s)	668
TspRI	CASTG	2 cut(s)	27, 109
Vha464I	CTTAAG	1 cut(s)	1481
VpaK11BI	GGWCC	3 cut(s)	203, 360, 1148
XapI	RAATTY	1 cut(s)	977
XceI	RCATGY	1 cut(s)	770
XmaI	CCCGGG	1 cut(s)	668
XspI	CTAG	2 cut(s)	90, 1172
Zsp2I	ATGCAT	1 cut(s)	652

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.