Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr11

Orthogroup ID

OG0000117

Physical Location & Seq

Genomic Coordinates Forward (+)

2412963 .. 2420071

Gene Structure 7109 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD11G1027700.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1629 bp

ATGCTTGCTGTTACTAATGTTGTGGCTTTCTCAGCAGAAGAAGTTTTGAACCAGGGTTCCTATTTGGCACAGCTTCAGCGTTTTATCAGCATCCATGTATGCATGACTATCGGCATCGATCTCTTCGTTGTGTCGACCTCTTATGTGTGTGTGAAAATATTTCATTTCGAAGGTGCTGCAAAAGAAGATGGTAGAGGACCAAGCATATGGGATCCCTACACGCACATCCATCGAGAAAGAATTGTAGATGGTAGCAATGGAGATGTTGCTGTTGATCAATATCACTGTTATAAGGAAGATGTCAAGATTATGAAGAATATGGGGTTGGATGCTTATAGATTCTCTATCTCATATTGCTTTATGATGGAAGAACAATCTTCCCAGGGACCCCACCTCAAACAAGTTGCAGGTGAACGTAATCCCATAGTTGGCCAAGAATTTGGATCAATAATGGAAGCATATGATTTTTACAAGTCAAAGAAGAAGTGGTCTATTTGTAACTTTGAAGAGTGTCATAATCATGTACTTTCAACACCTACAAAGGTACACCTACTACCTTCACACGGAAAAGTTTTGAAAGCAAAAAAGCTTTACATGGAGACACTAAGTAGTGCAAATGTACCTACAAGTCAACAATTTAGAATAATGGAAAATGAGGCAGGTGGAATTACAAATGTTGGATGTATTGACAAAGATTTGAGAAACCAAAATCTAAATTGCCTCGCCGGGAATTCGGCAATGGAACCATACTGGGCATCACACCATGTCCTTCTTGCTCATGCAGCTGCTGTAAAAGTGTACAAGGACAAATATCAGACAAAAGAAGATAAAAATGCTGCATTACGATCTTTGGATTTTATGTTTGGTATATGGAGCCATTATCCACAGAGCATGCGATCTCTTGTTGGAAAACCATTATCAGTATTCACCAACGAAGAATCCATGGTGCTAAATGGGTCATTTGATTTTCTTGGATTAAATTATTATACTGCTAGATATGCAAGCCATGACGTAACTAATAATTCTTCCATATATGCAAGCTACATAACAGATCCTCACGTCAAACTTACAAGTAAGCACAAGTTGAAATTAAGCTTTTCGACTTTGAAAAATATGTTCTTACAATATAATTGGATTCTAATATTCATTTTTCTCGTGGCAGCTGAGCTCAATGGAGTCCCGATCGGTCCACCCTCTACTTCAGATTGGTTATACGTTTATCCAAAAGTAGTTCATGATCTATTACTCTACATAAAGGAAAAGTATAATAATCCACTCATTTACATTACTGAAAATGGTATATCCGAGTTCAATGATCCTCAATTATCACTTGAGGAAGCCTTAAGTGATACTAATAGAGTTGACTACTATTATCGCCACATATTTTATACTCAAGCTGCAATCAAAAATGGTTCCAAAGTGAAGCGATACCTTGCATGGTCATTACTGGACAACTTTGAATGGGAAATAGAATACACTATTTGGTTTGGTATCAACTATGCGGATTACAATAATGGATTAAAAAGATATCCAAAACTTTCTGCATACTGGTTCAAAAGTTTCCCCAAGGATTCGAGAAGTGCCACAATCCTGTTGGAAATTCAAATCAAAACAGGTTGTAAATGGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0008150 GO:0008152 GO:0008422 GO:0015926 GO:0016787 GO:0016798 GO:0071704 GO:1901135 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_1

Protein Analysis

543

Amino Acids

62.22

Weight (kDa)

7.28

Isoelectric Point (pI)

27.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_1	PF00232	54 - 119	2.4e-22	Glycosyl hydrolase family 1
Glyco_hydro_1	PF00232	278 - 522	2.3e-41	Glycosyl hydrolase family 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca	FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica	MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica	Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis	pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis	RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata	RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora	Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa	Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha	Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana	Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	291
AarI	CACCTGC	2 cut(s)	398, 650
Acc36I	ACCTGC	2 cut(s)	398, 650
AccI	GTMKAC	1 cut(s)	134
AciI	CCGC	1 cut(s)	1502
AclWI	GGATC	5 cut(s)	206, 219, 451, 1046, 1310
AcoI	YGGCCR	1 cut(s)	430
AcsI	RAATTY	3 cut(s)	437, 730, 1599
AcuI	CTGAAG	2 cut(s)	59, 1185
AfaI	GTAC	4 cut(s)	525, 546, 621, 800
AfiI	CCNNNNNNNGG	2 cut(s)	428, 563
AflII	CTTAAG	1 cut(s)	1342
AjiI	CACGTC	1 cut(s)	1060
AjnI	CCWGG	2 cut(s)	51, 381
AjuI	GAANNNNNNNTTGG	2 cut(s)	308, 340
AloI	GAACNNNNNNTCC	2 cut(s)	41, 73
AluBI	AGCT	8 cut(s)	73, 589, 785, 1041, 1095, 1163, 1168, 1397
AluI	AGCT	8 cut(s)	73, 589, 785, 1041, 1095, 1163, 1168, 1397
Alw21I	GWGCWC	1 cut(s)	1170
Alw26I	GTCTC	1 cut(s)	593
AlwI	GGATC	5 cut(s)	206, 219, 451, 1046, 1310
AlwNI	CAGNNNCTG	1 cut(s)	788
AoxI	GGCC	1 cut(s)	430
ApeKI	GCWGC	6 cut(s)	176, 782, 785, 836, 1160, 1397
ApoI	RAATTY	3 cut(s)	437, 730, 1599
AspS9I	GGNCC	3 cut(s)	197, 386, 1187
AsuC2I	CCSGG	1 cut(s)	727
AsuHPI	GGTGA	2 cut(s)	422, 919
AsuII	TTCGAA	1 cut(s)	168
AvaII	GGWCC	3 cut(s)	197, 386, 1187
BalI	TGGCCA	1 cut(s)	432
BamHI	GGATCC	1 cut(s)	211
BanII	GRGCYC	1 cut(s)	1170
BauI	CACGAG	1 cut(s)	1154
Bbv12I	GWGCWC	1 cut(s)	1170
BbvI	GCAGC	6 cut(s)	163, 772, 794, 823, 1172, 1384
BccI	CCATC	4 cut(s)	182, 237, 242, 358
BcgI	CGANNNNNNTGC	6 cut(s)	91, 125, 158, 192, 212, 246
BciT130I	CCWGG	2 cut(s)	53, 383
BclI	TGATCA	1 cut(s)	274
BcnI	CCSGG	1 cut(s)	727
BcoDI	GTCTC	1 cut(s)	593
BfaI	CTAG	1 cut(s)	993
BfrI	CTTAAG	1 cut(s)	1342
BfuAI	ACCTGC	2 cut(s)	398, 650
BisI	GCNGC	6 cut(s)	177, 783, 786, 837, 1161, 1398
BlpI	GCTNAGC	1 cut(s)	1164
BlsI	GCNGC	6 cut(s)	178, 784, 787, 838, 1162, 1399
Bme1390I	CCNGG	3 cut(s)	53, 383, 727
Bme18I	GGWCC	3 cut(s)	197, 386, 1187
BmgBI	CACGTC	1 cut(s)	1060
BmgT120I	GGNCC	3 cut(s)	197, 386, 1187
BmiI	GGNNCC	7 cut(s)	58, 213, 387, 388, 744, 875, 1414
BmrFI	CCNGG	3 cut(s)	53, 383, 727
BmrI	ACTGGG	1 cut(s)	760
BmsI	GCATC	4 cut(s)	99, 123, 319, 764
BmuI	ACTGGG	1 cut(s)	760
Bpu1102I	GCTNAGC	1 cut(s)	1164
Bpu14I	TTCGAA	1 cut(s)	168
BpuEI	CTTGAG	2 cut(s)	1352, 1377
BpuMI	CCSGG	1 cut(s)	727
Bsa29I	ATCGAT	1 cut(s)	117
BsaBI	GATNNNNATC	1 cut(s)	279
BsaJI	CCNNGG	5 cut(s)	52, 381, 382, 942, 1566
Bsc4I	CCNNNNNNNGG	2 cut(s)	428, 563
Bse1I	ACTGG	3 cut(s)	755, 1452, 1553
Bse3DI	GCAATG	2 cut(s)	262, 744
Bse8I	GATNNNNATC	1 cut(s)	279
BseBI	CCWGG	2 cut(s)	53, 383
BseCI	ATCGAT	1 cut(s)	117
BseDI	CCNNGG	5 cut(s)	52, 381, 382, 942, 1566
BseGI	GGATG	4 cut(s)	90, 225, 334, 686
BseJI	GATNNNNATC	1 cut(s)	279
BseLI	CCNNNNNNNGG	2 cut(s)	428, 563
BseMI	GCAATG	2 cut(s)	262, 744
BseMII	CTCAG	2 cut(s)	45, 1155
BseNI	ACTGG	3 cut(s)	755, 1452, 1553
BseXI	GCAGC	6 cut(s)	163, 772, 794, 823, 1172, 1384
Bsh1285I	CGRYCG	1 cut(s)	1185
BshFI	GGCC	1 cut(s)	432
BshVI	ATCGAT	1 cut(s)	117
BsiEI	CGRYCG	1 cut(s)	1185
BsiHKAI	GWGCWC	1 cut(s)	1170
BsiSI	CCGG	1 cut(s)	726
BslFI	GGGAC	2 cut(s)	399, 1163
BslI	CCNNNNNNNGG	2 cut(s)	428, 563
BsmAI	GTCTC	1 cut(s)	593
BsmFI	GGGAC	2 cut(s)	399, 1163
BsnI	GGCC	1 cut(s)	432
Bsp119I	TTCGAA	1 cut(s)	168
Bsp1286I	GDGCHC	1 cut(s)	1170
Bsp1407I	TGTACA	1 cut(s)	798
Bsp1720I	GCTNAGC	1 cut(s)	1164
Bsp19I	CCATGG	1 cut(s)	942
BspACI	CCGC	1 cut(s)	1502
BspANI	GGCC	1 cut(s)	432
BspCNI	CTCAG	2 cut(s)	44, 1156
BspDI	ATCGAT	1 cut(s)	117
BspHI	TCATGA	1 cut(s)	1234
BspLI	GGNNCC	7 cut(s)	58, 213, 387, 388, 744, 875, 1414
BspMI	ACCTGC	2 cut(s)	398, 650
BspPI	GGATC	5 cut(s)	206, 219, 451, 1046, 1310
BspT104I	TTCGAA	1 cut(s)	168
BspTI	CTTAAG	1 cut(s)	1342
BsrDI	GCAATG	2 cut(s)	262, 744
BsrGI	TGTACA	1 cut(s)	798
BsrI	ACTGG	3 cut(s)	755, 1452, 1553
BssECI	CCNNGG	5 cut(s)	52, 381, 382, 942, 1566
BssSI	CACGAG	1 cut(s)	1154
BssT1I	CCWWGG	2 cut(s)	942, 1566
Bst2BI	CACGAG	1 cut(s)	1154
Bst2UI	CCWGG	2 cut(s)	53, 383
Bst4CI	ACNGT	1 cut(s)	287
Bst6I	CTCTTC	2 cut(s)	128, 501
BstAFI	CTTAAG	1 cut(s)	1342
BstAUI	TGTACA	1 cut(s)	798
BstBI	TTCGAA	1 cut(s)	168
BstC8I	GCNNGC	4 cut(s)	6, 893, 1003, 1039
BstDEI	CTNAG	3 cut(s)	31, 605, 1164
BstDSI	CCRYGG	1 cut(s)	942
BstF5I	GGATG	4 cut(s)	90, 225, 334, 686
BstMAI	GTCTC	1 cut(s)	593
BstMCI	CGRYCG	1 cut(s)	1185
BstMWI	GCNNNNNNNGC	3 cut(s)	32, 782, 998
BstNI	CCWGG	2 cut(s)	53, 383
BstNSI	RCATGY	1 cut(s)	895
BstSCI	CCNGG	3 cut(s)	51, 381, 725
BstV1I	GCAGC	6 cut(s)	163, 772, 794, 823, 1172, 1384
BstX2I	RGATCY	2 cut(s)	211, 1051
BstXI	CCANNNNNNTGG	2 cut(s)	207, 440
BstYI	RGATCY	2 cut(s)	211, 1051
Bsu15I	ATCGAT	1 cut(s)	117
BsuRI	GGCC	1 cut(s)	432
BsuTUI	ATCGAT	1 cut(s)	117
BtgI	CCRYGG	1 cut(s)	942
BtrI	CACGTC	1 cut(s)	1060
BtsCI	GGATG	4 cut(s)	90, 225, 334, 686
BtsIMutI	CAGTG	1 cut(s)	283
BveI	ACCTGC	2 cut(s)	398, 650
Cac8I	GCNNGC	4 cut(s)	6, 893, 1003, 1039
CaiI	CAGNNNCTG	1 cut(s)	788
CciI	TCATGA	1 cut(s)	1234
Cfr13I	GGNCC	3 cut(s)	197, 386, 1187
ClaI	ATCGAT	1 cut(s)	117
Csp6I	GTAC	4 cut(s)	524, 545, 620, 799
CviQI	GTAC	4 cut(s)	524, 545, 620, 799
DdeI	CTNAG	3 cut(s)	31, 605, 1164
EaeI	YGGCCR	1 cut(s)	430
Eam1104I	CTCTTC	2 cut(s)	128, 501
EarI	CTCTTC	2 cut(s)	128, 501
Ecl136II	GAGCTC	1 cut(s)	1168
Eco130I	CCWWGG	2 cut(s)	942, 1566
Eco24I	GRGCYC	1 cut(s)	1170
Eco32I	GATATC	1 cut(s)	1529
Eco47I	GGWCC	3 cut(s)	197, 386, 1187
Eco53kI	GAGCTC	1 cut(s)	1168
Eco57I	CTGAAG	2 cut(s)	59, 1185
EcoICRI	GAGCTC	1 cut(s)	1168
EcoO109I	RGGNCCY	1 cut(s)	386
EcoRI	GAATTC	1 cut(s)	730
EcoRII	CCWGG	2 cut(s)	51, 381
EcoRV	GATATC	1 cut(s)	1529
EcoT14I	CCWWGG	2 cut(s)	942, 1566
EcoT22I	ATGCAT	1 cut(s)	104
EcoT38I	GRGCYC	1 cut(s)	1170
ErhI	CCWWGG	2 cut(s)	942, 1566
FaqI	GGGAC	2 cut(s)	399, 1163
FauNDI	CATATG	2 cut(s)	206, 460
FbaI	TGATCA	1 cut(s)	274
FblI	GTMKAC	1 cut(s)	134
Fnu4HI	GCNGC	6 cut(s)	177, 783, 786, 837, 1161, 1398
FokI	GGATG	4 cut(s)	77, 212, 341, 693
FriOI	GRGCYC	1 cut(s)	1170
Fsp4HI	GCNGC	6 cut(s)	177, 783, 786, 837, 1161, 1398
FspBI	CTAG	1 cut(s)	993
GluI	GCNGC	6 cut(s)	177, 783, 786, 837, 1161, 1398
HaeIII	GGCC	1 cut(s)	432
HapII	CCGG	1 cut(s)	726
HincII	GTYRAC	3 cut(s)	135, 632, 1363
HindII	GTYRAC	3 cut(s)	135, 632, 1363
HindIII	AAGCTT	2 cut(s)	587, 1093
HinfI	GANTC	5 cut(s)	339, 938, 1135, 1176, 1571
HpaII	CCGG	1 cut(s)	726
HphI	GGTGA	2 cut(s)	422, 919
Hpy166II	GTNNAC	7 cut(s)	135, 413, 547, 632, 799, 1190, 1363
Hpy188I	TCNGA	3 cut(s)	816, 1204, 1306
Hpy188III	TCNNGA	5 cut(s)	233, 304, 1180, 1235, 1575
Hpy8I	GTNNAC	7 cut(s)	135, 413, 547, 632, 799, 1190, 1363
HpyAV	CCTTC	3 cut(s)	164, 567, 779
HpyCH4III	ACNGT	1 cut(s)	287
HpyCH4IV	ACGT	4 cut(s)	415, 1011, 1059, 1215
HpyF10VI	GCNNNNNNNGC	3 cut(s)	32, 782, 998
HpyF3I	CTNAG	3 cut(s)	31, 605, 1164
HpySE526I	ACGT	4 cut(s)	415, 1011, 1059, 1215
KflI	GGGWCCC	1 cut(s)	386
Ksp22I	TGATCA	1 cut(s)	274
LmnI	GCTCC	1 cut(s)	873
Lsp1109I	GCAGC	6 cut(s)	163, 772, 794, 823, 1172, 1384
LweI	GCATC	4 cut(s)	99, 123, 319, 764
MaeI	CTAG	1 cut(s)	993
MaeII	ACGT	4 cut(s)	415, 1011, 1059, 1215
MaeIII	GTNAC	3 cut(s)	10, 497, 1012
MflI	RGATCY	2 cut(s)	211, 1051
MhlI	GDGCHC	1 cut(s)	1170
MlsI	TGGCCA	1 cut(s)	432
MluNI	TGGCCA	1 cut(s)	432
MlyI	GAGTC	1 cut(s)	1185
MmeI	TCCRAC	4 cut(s)	306, 658, 886, 1575
MnlI	CCTC	9 cut(s)	148, 188, 404, 649, 731, 1065, 1204, 1327, 1329
Mox20I	TGGCCA	1 cut(s)	432
Mph1103I	ATGCAT	1 cut(s)	104
MscI	TGGCCA	1 cut(s)	432
MseI	TTAA	4 cut(s)	977, 1091, 1343, 1520
MslI	CAYNNNNRTG	1 cut(s)	519
Msp20I	TGGCCA	1 cut(s)	432
MspA1I	CMGCKG	2 cut(s)	785, 1163
MspCI	CTTAAG	1 cut(s)	1342
MspI	CCGG	1 cut(s)	726
MspR9I	CCNGG	3 cut(s)	53, 383, 727
MvaI	CCWGG	2 cut(s)	53, 383
MwoI	GCNNNNNNNGC	3 cut(s)	32, 782, 998
NciI	CCSGG	1 cut(s)	727
NcoI	CCATGG	1 cut(s)	942
NdeI	CATATG	2 cut(s)	206, 460
NlaIV	GGNNCC	7 cut(s)	58, 213, 387, 388, 744, 875, 1414
NsiI	ATGCAT	1 cut(s)	104
NspI	RCATGY	1 cut(s)	895
NspV	TTCGAA	1 cut(s)	168
PaeI	GCATGC	1 cut(s)	895
PagI	TCATGA	1 cut(s)	1234
PaqCI	CACCTGC	2 cut(s)	398, 650
PasI	CCCWGGG	1 cut(s)	382
PcsI	WCGNNNNNNNCGW	1 cut(s)	123
PfeI	GAWTC	4 cut(s)	339, 938, 1135, 1571
PkrI	GCNGC	6 cut(s)	178, 784, 787, 838, 1162, 1399
Ple19I	CGATCG	1 cut(s)	1185
PleI	GAGTC	1 cut(s)	1184
PpsI	GAGTC	1 cut(s)	1184
PpuMI	RGGWCCY	1 cut(s)	386
PsiI	TTATAA	1 cut(s)	291
Psp124BI	GAGCTC	1 cut(s)	1170
Psp5II	RGGWCCY	1 cut(s)	386
Psp6I	CCWGG	2 cut(s)	51, 381
PspGI	CCWGG	2 cut(s)	51, 381
PspN4I	GGNNCC	7 cut(s)	58, 213, 387, 388, 744, 875, 1414
PspPI	GGNCC	3 cut(s)	197, 386, 1187
PspPPI	RGGWCCY	1 cut(s)	386
PstNI	CAGNNNCTG	1 cut(s)	788
PsuI	RGATCY	2 cut(s)	211, 1051
PvuI	CGATCG	1 cut(s)	1185
PvuII	CAGCTG	2 cut(s)	785, 1163
RsaI	GTAC	4 cut(s)	525, 546, 621, 800
RsaNI	GTAC	4 cut(s)	524, 545, 620, 799
RseI	CAYNNNNRTG	1 cut(s)	519
SacI	GAGCTC	1 cut(s)	1170
SalI	GTCGAC	1 cut(s)	133
SaqAI	TTAA	4 cut(s)	977, 1091, 1343, 1520
SatI	GCNGC	6 cut(s)	177, 783, 786, 837, 1161, 1398
Sau96I	GGNCC	3 cut(s)	197, 386, 1187
SchI	GAGTC	1 cut(s)	1185
ScrFI	CCNGG	3 cut(s)	53, 383, 727
SduI	GDGCHC	1 cut(s)	1170
SfaNI	GCATC	4 cut(s)	99, 123, 319, 764
SfuI	TTCGAA	1 cut(s)	168
SinI	GGWCC	3 cut(s)	197, 386, 1187
SmiMI	CAYNNNNRTG	1 cut(s)	519
SmlI	CTYRAG	3 cut(s)	1331, 1342, 1392
SmoI	CTYRAG	3 cut(s)	1331, 1342, 1392
SphI	GCATGC	1 cut(s)	895
SsiI	CCGC	1 cut(s)	1502
SspI	AATATT	2 cut(s)	159, 1143
SspMI	CTAG	1 cut(s)	993
SstI	GAGCTC	1 cut(s)	1170
StyD4I	CCNGG	3 cut(s)	51, 381, 725
StyI	CCWWGG	2 cut(s)	942, 1566
TaaI	ACNGT	1 cut(s)	287
TaiI	ACGT	4 cut(s)	418, 1014, 1062, 1218
TaqI	TCGA	6 cut(s)	117, 134, 168, 232, 1100, 1574
TaqII	GACCGA	1 cut(s)	1175
TatI	WGTACW	2 cut(s)	523, 798
TfiI	GAWTC	4 cut(s)	339, 938, 1135, 1571
Tru1I	TTAA	4 cut(s)	977, 1091, 1343, 1520
Tru9I	TTAA	4 cut(s)	977, 1091, 1343, 1520
TscAI	CASTG	1 cut(s)	290
TseI	GCWGC	6 cut(s)	176, 782, 785, 836, 1160, 1397
TspDTI	ATGAA	4 cut(s)	152, 326, 1135, 1223
TspGWI	ACGGA	1 cut(s)	579
TspRI	CASTG	1 cut(s)	290
Vha464I	CTTAAG	1 cut(s)	1342
VpaK11BI	GGWCC	3 cut(s)	197, 386, 1187
XapI	RAATTY	3 cut(s)	437, 730, 1599
XceI	RCATGY	1 cut(s)	895
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1591
XmiI	GTMKAC	1 cut(s)	134
XspI	CTAG	1 cut(s)	993
Zsp2I	ATGCAT	1 cut(s)	104

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.