Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000177.1

Orthogroup ID

OG0000117

Physical Location & Seq

Genomic Coordinates Reverse (-)

101184 .. 108203

Gene Structure 7020 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000177.1_g000021.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1620 bp

atgatgacgattgaaggggtacagtgtagtgggtcggttgtcgcagataatcgatggtggtcacgggcaatcgaaggtggtcccgggaaatcaaaggtggtcactggtgataagagaatgggctttagattgacaagcagtgaagctcttacacccagtactcctatctatgacactggtttcctcaacaggactagtttcccagcaggtttcatatttgggacagcttcagcgtcatatcagtatgaaggtgctgctaaagaaggtggtagaggacccagcatatgggatacctacacccacgaacatccagaaaggatcacggatggaagcaatggagatgtggctaatgatcaatatcaccactataaggaagatgtggggattatgaagaacatgaatttggatgcttataggttctctatctcatggtcaagattgttaccaaatggaaagctaagtgggggagtgaacaaggaaggagtcaagtactacaacaatctcatcaacgaactcctaagcaatggtctaaagccatttgtgaccctctttcattgggatcttccccaaactttagaagacgaatatggcggtttcttaagccctaacgttgtcaagcattttcgggactatgcggagctgtgtttcaaggaatttggtgatcgggtaaagcactggatcacgttgaatgagccatggacatacagtaatggtggttatgcagtcgggtcattggcaccaggacggtgttctgcgtggcagcagctaaattgcaccggcggggattcgggtactgaaccatatttggtggcacaccacctactcctctctcatgcagctgctgtaaagttgtacaagcagaaatatcaggcatctcaaaaaggagttataggagtgaccctagtgtctcactggttcattccaatttcaggggcaaagcacaacaaaaatgctgccttacgatctttggattttatgtttggatggttcatggaccctttgacaaacggagactatccacacagcatgcgatctctcgtcggaaaccgattacccaaattcacaaaagaacaatccaagttactaatcggatcatttgattttcttggactaaattactatactacttactatgcaacatatacacctcagaacaattctttaaatgcaagctacttgacagacgctcgtgctactcaatcatttgcgctaaatggcgtccccattggtccacaggctgcttcatcatggctatatgtttatccaaaaggaattagagaccttttactctatacaaagacaaagtataatgatccacttatttacattactgagaatggcattgatgagttcaatgatcccaaattatcacttgaggaagccctctatgacactcagagagttgactattacttccgccacctctattaccttcaaaaagcaatcaaggaaggtgtgaacttgaagggctactttgcatggtcattgctagacaacttcgaatgggcttcgggttacacagttcgctttggtatcaactatgtggattacaaaaatggaaacaaaaggcacccaaaactctcggcacattggttcaaaaacttcctcaagaagtactaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0008150 GO:0008152 GO:0008422 GO:0015926 GO:0016787 GO:0016798 GO:0071704 GO:1901135 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_1

Protein Analysis

539

Amino Acids

61.1

Weight (kDa)

8.72

Isoelectric Point (pI)

23.73

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca	FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica	MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica	Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis	pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis	RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata	RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora	Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa	Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha	Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana	Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	904
Acc36I	ACCTGC	1 cut(s)	197
AccB1I	GGYRCC	2 cut(s)	736, 1569
AccB7I	CCANNNNNTGG	1 cut(s)	285
AciI	CCGC	4 cut(s)	591, 635, 780, 1417
AclI	AACGTT	1 cut(s)	609
AclWI	GGATC	6 cut(s)	326, 567, 686, 1099, 1307, 1352
AcsI	RAATTY	3 cut(s)	400, 653, 1058
AcuI	CTGAAG	1 cut(s)	213
AcyI	GRCGYC	1 cut(s)	1218
AfaI	GTAC	6 cut(s)	21, 160, 491, 793, 854, 1616
AfiI	CCNNNNNNNGG	3 cut(s)	285, 370, 929
AflII	CTTAAG	1 cut(s)	598
AgsI	TTSAA	7 cut(s)	14, 649, 688, 1354, 1436, 1465, 1597
AhlI	ACTAGT	1 cut(s)	194
AjnI	CCWGG	1 cut(s)	739
AjuI	GAANNNNNNNTTGG	2 cut(s)	386, 418
AluBI	AGCT	7 cut(s)	146, 227, 457, 640, 766, 839, 1173
AluI	AGCT	7 cut(s)	146, 227, 457, 640, 766, 839, 1173
Alw26I	GTCTC	3 cut(s)	912, 1005, 1272
AlwI	GGATC	6 cut(s)	326, 567, 686, 1099, 1307, 1352
AlwNI	CAGNNNCTG	1 cut(s)	842
Ama87I	CYCGRG	1 cut(s)	83
ApeKI	GCWGC	7 cut(s)	254, 760, 763, 836, 839, 953, 1238
ApoI	RAATTY	3 cut(s)	400, 653, 1058
AspLEI	GCGC	1 cut(s)	1210
AspS9I	GGNCC	4 cut(s)	80, 275, 994, 1229
AsuC2I	CCSGG	2 cut(s)	84, 85
AsuHPI	GGTGA	3 cut(s)	119, 353, 671
AsuII	TTCGAA	1 cut(s)	1500
AvaI	CYCGRG	1 cut(s)	83
AvaII	GGWCC	4 cut(s)	80, 275, 994, 1229
BanI	GGYRCC	2 cut(s)	736, 1569
BauI	CACGAG	1 cut(s)	1188
BbsI	GAAGAC	1 cut(s)	585
BbvI	GCAGC	7 cut(s)	241, 772, 775, 826, 848, 940, 1225
BccI	CCATC	3 cut(s)	48, 320, 978
BciT130I	CCWGG	1 cut(s)	741
BciVI	GTATCC	1 cut(s)	283
BclI	TGATCA	1 cut(s)	352
BcnI	CCSGG	2 cut(s)	84, 85
BcoDI	GTCTC	3 cut(s)	912, 1005, 1272
BcuI	ACTAGT	1 cut(s)	194
BfaI	CTAG	3 cut(s)	195, 902, 1490
BfrI	CTTAAG	1 cut(s)	598
BfuAI	ACCTGC	1 cut(s)	197
BfuI	GTATCC	1 cut(s)	283
BisI	GCNGC	7 cut(s)	255, 761, 764, 837, 840, 954, 1239
BlsI	GCNGC	7 cut(s)	256, 762, 765, 838, 841, 955, 1240
BmcAI	AGTACT	3 cut(s)	160, 491, 1616
Bme1390I	CCNGG	3 cut(s)	84, 85, 741
Bme18I	GGWCC	4 cut(s)	80, 275, 994, 1229
BmeT110I	CYCGRG	1 cut(s)	83
BmgT120I	GGNCC	4 cut(s)	80, 275, 994, 1229
BmiI	GGNNCC	5 cut(s)	82, 277, 738, 996, 1571
BmrFI	CCNGG	3 cut(s)	84, 85, 741
BmrI	ACTGGG	1 cut(s)	150
BmsI	GCATC	2 cut(s)	397, 881
BmuI	ACTGGG	1 cut(s)	150
BpiI	GAAGAC	1 cut(s)	585
Bpu10I	CCTNAGC	1 cut(s)	518
Bpu14I	TTCGAA	1 cut(s)	1500
BpuEI	CTTGAG	2 cut(s)	1394, 1592
BpuMI	CCSGG	2 cut(s)	84, 85
Bsa29I	ATCGAT	1 cut(s)	52
BsaBI	GATNNNNATC	1 cut(s)	357
BsaHI	GRCGYC	1 cut(s)	1218
BsaI	GGTCTC	1 cut(s)	1272
BsaJI	CCNNGG	2 cut(s)	83, 695
Bsc4I	CCNNNNNNNGG	3 cut(s)	285, 370, 929
Bse118I	RCCGGY	1 cut(s)	776
Bse1I	ACTGG	5 cut(s)	109, 156, 181, 680, 917
Bse3DI	GCAATG	3 cut(s)	340, 529, 1484
Bse8I	GATNNNNATC	1 cut(s)	357
BseBI	CCWGG	1 cut(s)	741
BseCI	ATCGAT	1 cut(s)	52
BseDI	CCNNGG	2 cut(s)	83, 695
BseGI	GGATG	4 cut(s)	307, 331, 412, 989
BseJI	GATNNNNATC	1 cut(s)	357
BseLI	CCNNNNNNNGG	3 cut(s)	285, 370, 929
BseMI	GCAATG	3 cut(s)	340, 529, 1484
BseMII	CTCAG	3 cut(s)	1163, 1323, 1409
BseNI	ACTGG	5 cut(s)	109, 156, 181, 680, 917
BseRI	GAGGAG	1 cut(s)	815
BseXI	GCAGC	7 cut(s)	241, 772, 775, 826, 848, 940, 1225
BseYI	CCCAGC	2 cut(s)	202, 278
BshNI	GGYRCC	2 cut(s)	736, 1569
BshVI	ATCGAT	1 cut(s)	52
BsiHKCI	CYCGRG	1 cut(s)	83
BsiSI	CCGG	2 cut(s)	84, 777
BslFI	GGGAC	4 cut(s)	66, 235, 641, 1205
BslI	CCNNNNNNNGG	3 cut(s)	285, 370, 929
BsmAI	GTCTC	3 cut(s)	912, 1005, 1272
BsmFI	GGGAC	4 cut(s)	66, 235, 641, 1205
Bso31I	GGTCTC	1 cut(s)	1272
BsoBI	CYCGRG	1 cut(s)	83
Bsp119I	TTCGAA	1 cut(s)	1500
Bsp1407I	TGTACA	1 cut(s)	852
Bsp19I	CCATGG	1 cut(s)	695
BspACI	CCGC	4 cut(s)	591, 635, 780, 1417
BspCNI	CTCAG	3 cut(s)	1162, 1324, 1408
BspDI	ATCGAT	1 cut(s)	52
BspLI	GGNNCC	5 cut(s)	82, 277, 738, 996, 1571
BspMI	ACCTGC	1 cut(s)	197
BspPI	GGATC	6 cut(s)	326, 567, 686, 1099, 1307, 1352
BspT104I	TTCGAA	1 cut(s)	1500
BspT107I	GGYRCC	2 cut(s)	736, 1569
BspTI	CTTAAG	1 cut(s)	598
BspTNI	GGTCTC	1 cut(s)	1272
BsrDI	GCAATG	3 cut(s)	340, 529, 1484
BsrFI	RCCGGY	1 cut(s)	776
BsrGI	TGTACA	1 cut(s)	852
BsrI	ACTGG	5 cut(s)	109, 156, 181, 680, 917
BssAI	RCCGGY	1 cut(s)	776
BssECI	CCNNGG	2 cut(s)	83, 695
BssNI	GRCGYC	1 cut(s)	1218
BssSI	CACGAG	1 cut(s)	1188
BssT1I	CCWWGG	1 cut(s)	695
Bst2BI	CACGAG	1 cut(s)	1188
Bst2UI	CCWGG	1 cut(s)	741
Bst4CI	ACNGT	4 cut(s)	24, 707, 747, 1522
BstACI	GRCGYC	1 cut(s)	1218
BstAFI	CTTAAG	1 cut(s)	598
BstAUI	TGTACA	1 cut(s)	852
BstBI	TTCGAA	1 cut(s)	1500
BstC8I	GCNNGC	2 cut(s)	1028, 1171
BstDEI	CTNAG	5 cut(s)	458, 518, 1149, 1332, 1395
BstDSI	CCRYGG	1 cut(s)	695
BstF5I	GGATG	4 cut(s)	307, 331, 412, 989
BstHHI	GCGC	1 cut(s)	1210
BstMAI	GTCTC	3 cut(s)	912, 1005, 1272
BstNI	CCWGG	1 cut(s)	741
BstNSI	RCATGY	1 cut(s)	1030
BstSCI	CCNGG	3 cut(s)	82, 83, 739
BstV1I	GCAGC	7 cut(s)	241, 772, 775, 826, 848, 940, 1225
BstV2I	GAAGAC	1 cut(s)	585
BstX2I	RGATCY	1 cut(s)	559
BstYI	RGATCY	1 cut(s)	559
Bsu15I	ATCGAT	1 cut(s)	52
BsuI	GTATCC	1 cut(s)	283
BsuTUI	ATCGAT	1 cut(s)	52
BtgI	CCRYGG	1 cut(s)	695
BtsCI	GGATG	4 cut(s)	307, 331, 412, 989
BtsI	GCAGTG	1 cut(s)	145
BtsIMutI	CAGTG	6 cut(s)	29, 102, 145, 174, 673, 910
BveI	ACCTGC	1 cut(s)	197
Cac8I	GCNNGC	2 cut(s)	1028, 1171
CaiI	CAGNNNCTG	1 cut(s)	842
CfoI	GCGC	1 cut(s)	1210
Cfr10I	RCCGGY	1 cut(s)	776
Cfr13I	GGNCC	4 cut(s)	80, 275, 994, 1229
Cfr9I	CCCGGG	1 cut(s)	83
ClaI	ATCGAT	1 cut(s)	52
CseI	GACGC	3 cut(s)	222, 1193, 1207
Csp6I	GTAC	6 cut(s)	20, 159, 490, 792, 853, 1615
CviAII	CATG	8 cut(s)	397, 429, 696, 833, 991, 1027, 1248, 1479
CviQI	GTAC	6 cut(s)	20, 159, 490, 792, 853, 1615
DdeI	CTNAG	5 cut(s)	458, 518, 1149, 1332, 1395
DraI	TTTAAA	1 cut(s)	1164
DrdI	GACNNNNNNGTC	1 cut(s)	904
DseDI	GACNNNNNNGTC	1 cut(s)	904
EciI	GGCGGA	1 cut(s)	1406
Eco130I	CCWWGG	1 cut(s)	695
Eco31I	GGTCTC	1 cut(s)	1272
Eco47I	GGWCC	4 cut(s)	80, 275, 994, 1229
Eco57I	CTGAAG	1 cut(s)	213
Eco88I	CYCGRG	1 cut(s)	83
EcoO109I	RGGNCCY	1 cut(s)	275
EcoRII	CCWGG	1 cut(s)	739
EcoT14I	CCWWGG	1 cut(s)	695
ErhI	CCWWGG	1 cut(s)	695
FaeI	CATG	8 cut(s)	400, 432, 699, 836, 994, 1030, 1251, 1482
FalI	AAGNNNNNCTT	2 cut(s)	1457, 1489
FaqI	GGGAC	4 cut(s)	66, 235, 641, 1205
FatI	CATG	8 cut(s)	396, 428, 695, 832, 990, 1026, 1247, 1478
FauI	CCCGC	1 cut(s)	773
FauNDI	CATATG	1 cut(s)	284
FbaI	TGATCA	1 cut(s)	352
Fnu4HI	GCNGC	7 cut(s)	255, 761, 764, 837, 840, 954, 1239
FokI	GGATG	4 cut(s)	294, 338, 419, 996
Fsp4HI	GCNGC	7 cut(s)	255, 761, 764, 837, 840, 954, 1239
FspBI	CTAG	3 cut(s)	195, 902, 1490
GlaI	GCGC	1 cut(s)	1209
GluI	GCNGC	7 cut(s)	255, 761, 764, 837, 840, 954, 1239
GsaI	CCCAGC	2 cut(s)	206, 282
HapII	CCGG	2 cut(s)	84, 777
HgaI	GACGC	3 cut(s)	222, 1193, 1207
HhaI	GCGC	1 cut(s)	1210
Hin1I	GRCGYC	1 cut(s)	1218
Hin1II	CATG	8 cut(s)	400, 432, 699, 836, 994, 1030, 1251, 1482
Hin6I	GCGC	1 cut(s)	1208
HinP1I	GCGC	1 cut(s)	1208
HincII	GTYRAC	1 cut(s)	1405
HindII	GTYRAC	1 cut(s)	1405
HinfI	GANTC	2 cut(s)	483, 785
HpaII	CCGG	2 cut(s)	84, 777
HphI	GGTGA	3 cut(s)	119, 353, 671
Hpy166II	GTNNAC	4 cut(s)	472, 1232, 1405, 1459
Hpy188I	TCNGA	4 cut(s)	1043, 1091, 1152, 1398
Hpy188III	TCNNGA	4 cut(s)	311, 435, 626, 1609
Hpy8I	GTNNAC	4 cut(s)	472, 1232, 1405, 1459
Hpy99I	CGWCG	1 cut(s)	1043
HpyAV	CCTTC	8 cut(s)	8, 68, 242, 257, 473, 1442, 1445, 1459
HpyCH4III	ACNGT	4 cut(s)	24, 707, 747, 1522
HpyCH4IV	ACGT	2 cut(s)	609, 683
HpyCH4V	TGCA	6 cut(s)	722, 774, 836, 1136, 1169, 1478
HpyF3I	CTNAG	5 cut(s)	458, 518, 1149, 1332, 1395
HpySE526I	ACGT	2 cut(s)	609, 683
Hsp92I	GRCGYC	1 cut(s)	1218
Hsp92II	CATG	8 cut(s)	400, 432, 699, 836, 994, 1030, 1251, 1482
HspAI	GCGC	1 cut(s)	1208
Ksp22I	TGATCA	1 cut(s)	352
LmnI	GCTCC	1 cut(s)	637
Lsp1109I	GCAGC	7 cut(s)	241, 772, 775, 826, 848, 940, 1225
LweI	GCATC	2 cut(s)	397, 881
MaeI	CTAG	3 cut(s)	195, 902, 1490
MaeII	ACGT	2 cut(s)	609, 683
MaeIII	GTNAC	7 cut(s)	60, 100, 441, 541, 895, 1080, 1514
MboII	GAAGA	4 cut(s)	386, 403, 554, 590
MflI	RGATCY	1 cut(s)	559
MluCI	AATT	9 cut(s)	400, 653, 769, 924, 1058, 1114, 1156, 1272, 1364
MlyI	GAGTC	1 cut(s)	492
MmeI	TCCRAC	1 cut(s)	1021
MnlI	CCTC	9 cut(s)	194, 266, 557, 836, 1158, 1369, 1394, 1433, 1616
MseI	TTAA	2 cut(s)	599, 1163
MspA1I	CMGCKG	1 cut(s)	839
MspCI	CTTAAG	1 cut(s)	598
MspI	CCGG	2 cut(s)	84, 777
MspR9I	CCNGG	3 cut(s)	84, 85, 741
MvaI	CCWGG	1 cut(s)	741
NciI	CCSGG	2 cut(s)	84, 85
NcoI	CCATGG	1 cut(s)	695
NdeI	CATATG	1 cut(s)	284
NlaIII	CATG	8 cut(s)	400, 432, 699, 836, 994, 1030, 1251, 1482
NlaIV	GGNNCC	5 cut(s)	82, 277, 738, 996, 1571
NmeAIII	GCCGAG	1 cut(s)	1562
NmuCI	GTSAC	4 cut(s)	60, 100, 541, 895
NspI	RCATGY	1 cut(s)	1030
NspV	TTCGAA	1 cut(s)	1500
PaeI	GCATGC	1 cut(s)	1030
PfeI	GAWTC	1 cut(s)	785
PflMI	CCANNNNNTGG	1 cut(s)	285
PkrI	GCNGC	7 cut(s)	256, 762, 765, 838, 841, 955, 1240
PleI	GAGTC	1 cut(s)	491
PpsI	GAGTC	1 cut(s)	491
PpuMI	RGGWCCY	1 cut(s)	275
Psp1406I	AACGTT	1 cut(s)	609
Psp5II	RGGWCCY	1 cut(s)	275
Psp6I	CCWGG	1 cut(s)	739
PspFI	CCCAGC	2 cut(s)	202, 278
PspGI	CCWGG	1 cut(s)	739
PspN4I	GGNNCC	5 cut(s)	82, 277, 738, 996, 1571
PspPI	GGNCC	4 cut(s)	80, 275, 994, 1229
PspPPI	RGGWCCY	1 cut(s)	275
PstNI	CAGNNNCTG	1 cut(s)	842
PsuI	RGATCY	1 cut(s)	559
PvuII	CAGCTG	1 cut(s)	839
RsaI	GTAC	6 cut(s)	21, 160, 491, 793, 854, 1616
RsaNI	GTAC	6 cut(s)	20, 159, 490, 792, 853, 1615
SaqAI	TTAA	2 cut(s)	599, 1163
SatI	GCNGC	7 cut(s)	255, 761, 764, 837, 840, 954, 1239
Sau96I	GGNCC	4 cut(s)	80, 275, 994, 1229
ScaI	AGTACT	3 cut(s)	160, 491, 1616
SchI	GAGTC	1 cut(s)	492
ScrFI	CCNGG	3 cut(s)	84, 85, 741
SfaNI	GCATC	2 cut(s)	397, 881
SfuI	TTCGAA	1 cut(s)	1500
SgrAI	CRCCGGYG	1 cut(s)	776
SinI	GGWCC	4 cut(s)	80, 275, 994, 1229
SmaI	CCCGGG	1 cut(s)	85
SmlI	CTYRAG	3 cut(s)	598, 1373, 1607
SmoI	CTYRAG	3 cut(s)	598, 1373, 1607
SpeI	ACTAGT	1 cut(s)	194
SphI	GCATGC	1 cut(s)	1030
Sse9I	AATT	9 cut(s)	400, 653, 769, 924, 1058, 1114, 1156, 1272, 1364
SsiI	CCGC	4 cut(s)	591, 635, 780, 1417
SspMI	CTAG	3 cut(s)	195, 902, 1490
StyD4I	CCNGG	3 cut(s)	82, 83, 739
StyI	CCWWGG	1 cut(s)	695
TaaI	ACNGT	4 cut(s)	24, 707, 747, 1522
TaiI	ACGT	2 cut(s)	612, 686
TaqI	TCGA	3 cut(s)	52, 72, 1500
TasI	AATT	9 cut(s)	400, 653, 769, 924, 1058, 1114, 1156, 1272, 1364
TatI	WGTACW	4 cut(s)	158, 489, 852, 1614
TfiI	GAWTC	1 cut(s)	785
Tru1I	TTAA	2 cut(s)	599, 1163
Tru9I	TTAA	2 cut(s)	599, 1163
TscAI	CASTG	6 cut(s)	29, 109, 145, 181, 680, 917
TseFI	GTSAC	4 cut(s)	60, 100, 541, 895
TseI	GCWGC	7 cut(s)	254, 760, 763, 836, 839, 953, 1238
Tsp45I	GTSAC	4 cut(s)	60, 100, 541, 895
TspDTI	ATGAA	8 cut(s)	202, 261, 404, 413, 542, 907, 979, 1233
TspGWI	ACGGA	2 cut(s)	338, 1023
TspMI	CCCGGG	1 cut(s)	83
TspRI	CASTG	6 cut(s)	29, 109, 145, 181, 680, 917
Van91I	CCANNNNNTGG	1 cut(s)	285
Vha464I	CTTAAG	1 cut(s)	598
VpaK11BI	GGWCC	4 cut(s)	80, 275, 994, 1229
XapI	RAATTY	3 cut(s)	400, 653, 1058
XceI	RCATGY	1 cut(s)	1030
XmaI	CCCGGG	1 cut(s)	83
XspI	CTAG	3 cut(s)	195, 902, 1490
ZrmI	AGTACT	3 cut(s)	160, 491, 1616

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.