RchiOBHm_Chr5g0078011

Belongs to the glycosyl hydrolase 1 family

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
Physical Location & Seq
Forward (+)
83892502 .. 83898281
5780 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ35255

Sequence Viewer

Length: 1572 bp
ATGGTGTCCATTTCCAGAGGCTCTTCTTTCCTTAATATTATTACTATAAGCCTTATAGTAATTCCTTTTGCCTCGTTAGTGAGAGGTAGTACTAGTGATGATCTGAGCAGCGATCGCTATGCAACTGCTTTTCTCAACCGGACCAGTTTTCCAGCTGGTTTTGTATTCGGCACAGCTTCATCAGCTTACCAGTATGAAGGTGCTGCAAATGAAAGTGGTAGAGGACCAAGTATATGGGATACTTTCACCCACAAATATCCAGGTAAGATAACAGATGGTAGCAATGGAGATGTTGCAATAGATTCATATCATCGCTATAAGGAAGATGTGGGGATTATGAAGGAAATGGGTTTGGATGTATACAGATTTTCTATCTCATGGTCTAGAGTACTACCAAAGGGGAAAATAAGTGGAGGTGTGAACAAGGAAGGGATAGAATACTACAACAACCTTATCAATGAACTCCTTGCCAATGGTATAAAGCCTTTTGTGACACTCTTCCACTGGGATCTTCCCCAAACCCTGCAAGACGAGCATGGCGGCTTCCTAAGTCCCCATGTTGTGAAGCATTTTGAGGCCTATGCGGAACTTTGTTATAAGGAATTTGGTGATCGGGTGAAGCACTGGATCACATTCAATGAGCCAATTGCCCTCGCTGTGGCTGGTTACGGACTCGGGGCATTGGCACCAGGACGATGTTCCACTTGGATAAACCCCAACTGCACTGGAGGGAATTCAGCGACGGAGCCGTATCTGGTCACACATTACCAACTCCTTGCTCATGCAGCTGCAGTTAACATGTATAAGAAACATTATCAGGAGTCCCAAAAAGGACTGATAGGGATCACGCTGGTGGCAGAATGGTTGATACCAAATTCTACGGCACAGCACGACCAAGTTGCTGCATTTAGAGCCCTAGATTTTATATTTGGATGGTACATGGACCCTTTGACAAATGGTGACTATCCTAAGAGCATGAGATCTCTTGTCGGAGACCGATTGCCTAAGTTCAAGAAAGAGCAATCCAAATTGCTGAAAGGGTCGTTTGACTTTATCGGATTGAACTATTACACTTCTAGCTACGTATCCGACACACCCCAGCTAGTGAAAGTCGCCAATGCAAGCTACATGACAGACTCTCTTGCGACTATGTCACCCCTTCGTAATGGAATCCCCATTGGTCCAAAGGCTGCCTCAGAGGGCCTCTATATTTATCCGAGAGGCATCAGGGATATTTTGCTCTACACAAAGAGAAAGTATAACAATCCACTTATTTACATCACAGAGAATGGCGTTGATGAGTTTAACGATCACAAGTTGACCCTTGAAAAAGCCCTTGCTGACAACCAAAGAATTGACTACCACTTTCGCCATCTCTATTACCTCCGAGAATCGATCAAAGATGGTGTTAATGTGAAGGGATACTTTGCATGGTCATTATTGGACAACTTTGAATGGACATTAGGTTACACTGTTCGATTTGGCATCAACTATGTCGATTATAAAGATGGGCTTAAAAGATACCCTAAACACTCAGCAATATGGTTCAAGAATTTCCTCAAAAAGTACTAA

Protein Analysis

523

Amino Acids

59.13

Weight (kDa)

8.67

Isoelectric Point (pI)

25.21

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 48 - 521 1.2e-161 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 597, 1503
AccB1I GGYRCC 1 cut(s) 685
AccI GTMKAC 1 cut(s) 360
AciI CCGC 2 cut(s) 540, 584
AclWI GGATC 3 cut(s) 516, 635, 851
AcsI RAATTY 4 cut(s) 602, 733, 874, 1552
AfaI GTAC 4 cut(s) 91, 390, 938, 1568
AfiI CCNNNNNNNGG 1 cut(s) 658
AflIII ACRYGT 1 cut(s) 798
AgsI TTSAA 6 cut(s) 637, 1012, 1063, 1328, 1454, 1549
AhlI ACTAGT 1 cut(s) 92
AjnI CCWGG 2 cut(s) 259, 688
AleI CACNNNNGTG 1 cut(s) 851
AluBI AGCT 7 cut(s) 155, 176, 185, 788, 1080, 1102, 1125
AluI AGCT 7 cut(s) 155, 176, 185, 788, 1080, 1102, 1125
Alw26I GTCTC 1 cut(s) 987
AlwI GGATC 3 cut(s) 516, 635, 851
Ama87I CYCGRG 1 cut(s) 674
AoxI GGCC 2 cut(s) 576, 1201
ApeKI GCWGC 6 cut(s) 108, 203, 785, 788, 902, 1190
ApoI RAATTY 4 cut(s) 602, 733, 874, 1552
AsiSI GCGATCGC 1 cut(s) 115
AspS9I GGNCC 5 cut(s) 141, 224, 943, 1181, 1201
AsuHPI GGTGA 5 cut(s) 238, 620, 628, 971, 1146
AvaI CYCGRG 1 cut(s) 674
AvaII GGWCC 4 cut(s) 141, 224, 943, 1181
BanI GGYRCC 1 cut(s) 685
BanII GRGCYC 1 cut(s) 916
BbvI GCAGC 6 cut(s) 120, 190, 775, 797, 889, 1177
BccI CCATC 5 cut(s) 269, 927, 1380, 1397, 1502
BceAI ACGGC 2 cut(s) 733, 897
BcgI CGANNNNNNTGC 4 cut(s) 101, 135, 881, 915
BciT130I CCWGG 2 cut(s) 261, 690
BciVI GTATCC 3 cut(s) 232, 1096, 1415
BcoDI GTCTC 1 cut(s) 987
BcuI ACTAGT 1 cut(s) 92
BfaI CTAG 5 cut(s) 93, 384, 917, 1077, 1103
BfmI CTRYAG 1 cut(s) 789
BfuI GTATCC 3 cut(s) 232, 1096, 1415
BglII AGATCT 1 cut(s) 980
BisI GCNGC 7 cut(s) 109, 204, 541, 786, 789, 903, 1191
BlsI GCNGC 7 cut(s) 110, 205, 542, 787, 790, 904, 1192
BmcAI AGTACT 3 cut(s) 91, 390, 1568
Bme1390I CCNGG 2 cut(s) 261, 690
Bme18I GGWCC 4 cut(s) 141, 224, 943, 1181
BmeT110I CYCGRG 1 cut(s) 674
BmgT120I GGNCC 5 cut(s) 141, 224, 943, 1181, 1201
BmiI GGNNCC 3 cut(s) 687, 747, 945
BmrFI CCNGG 2 cut(s) 261, 690
BmrI ACTGGG 1 cut(s) 514
BmsI GCATC 2 cut(s) 1233, 1494
BmuI ACTGGG 1 cut(s) 514
BpmI CTGGAG 1 cut(s) 747
Bsa29I ATCGAT 1 cut(s) 1394
BsaAI YACGTR 1 cut(s) 1084
BsaBI GATNNNNATC 2 cut(s) 306, 842
BsaI GGTCTC 1 cut(s) 987
BsaWI WCCGGW 1 cut(s) 138
Bsc4I CCNNNNNNNGG 1 cut(s) 658
Bse1I ACTGG 5 cut(s) 144, 190, 509, 629, 730
Bse3DI GCAATG 1 cut(s) 289
Bse8I GATNNNNATC 2 cut(s) 306, 842
BseBI CCWGG 2 cut(s) 261, 690
BseCI ATCGAT 1 cut(s) 1394
BseGI GGATG 2 cut(s) 361, 938
BseJI GATNNNNATC 2 cut(s) 306, 842
BseLI CCNNNNNNNGG 1 cut(s) 658
BseMI GCAATG 1 cut(s) 289
BseMII CTCAG 3 cut(s) 95, 1209, 1548
BseNI ACTGG 5 cut(s) 144, 190, 509, 629, 730
BseXI GCAGC 6 cut(s) 120, 190, 775, 797, 889, 1177
BseYI CCCAGC 1 cut(s) 1098
BsgI GTGCAG 1 cut(s) 706
Bsh1285I CGRYCG 1 cut(s) 115
BshFI GGCC 2 cut(s) 578, 1203
BshNI GGYRCC 1 cut(s) 685
BshVI ATCGAT 1 cut(s) 1394
BsiEI CGRYCG 1 cut(s) 115
BsiHKCI CYCGRG 1 cut(s) 674
BsiSI CCGG 1 cut(s) 139
BslFI GGGAC 2 cut(s) 537, 808
BslI CCNNNNNNNGG 1 cut(s) 658
BsmAI GTCTC 1 cut(s) 987
BsmFI GGGAC 2 cut(s) 537, 808
BsnI GGCC 2 cut(s) 578, 1203
Bso31I GGTCTC 1 cut(s) 987
BsoBI CYCGRG 1 cut(s) 674
Bsp1286I GDGCHC 1 cut(s) 916
Bsp143I GATC 9 cut(s) 100, 112, 508, 610, 627, 843, 980, 1309, 1395
BspACI CCGC 2 cut(s) 540, 584
BspANI GGCC 2 cut(s) 578, 1203
BspCNI CTCAG 3 cut(s) 96, 1208, 1547
BspDI ATCGAT 1 cut(s) 1394
BspLI GGNNCC 3 cut(s) 687, 747, 945
BspMAI CTGCAG 1 cut(s) 793
BspPI GGATC 3 cut(s) 516, 635, 851
BspQI GCTCTTC 1 cut(s) 28
BspT107I GGYRCC 1 cut(s) 685
BspTNI GGTCTC 1 cut(s) 987
BsrDI GCAATG 1 cut(s) 289
BsrI ACTGG 5 cut(s) 144, 190, 509, 629, 730
BssMI GATC 9 cut(s) 100, 112, 508, 610, 627, 843, 980, 1309, 1395
BssNAI GTATAC 1 cut(s) 361
Bst1107I GTATAC 1 cut(s) 361
Bst2UI CCWGG 2 cut(s) 261, 690
Bst4CI ACNGT 1 cut(s) 1474
Bst6I CTCTTC 2 cut(s) 28, 503
BstBAI YACGTR 1 cut(s) 1084
BstC8I GCNNGC 1 cut(s) 1123
BstDEI CTNAG 6 cut(s) 104, 548, 969, 1005, 1195, 1534
BstF5I GGATG 2 cut(s) 361, 938
BstKTI GATC 9 cut(s) 103, 115, 511, 613, 630, 846, 983, 1312, 1398
BstMAI GTCTC 1 cut(s) 987
BstMBI GATC 9 cut(s) 100, 112, 508, 610, 627, 843, 980, 1309, 1395
BstMCI CGRYCG 1 cut(s) 115
BstMWI GCNNNNNNNGC 5 cut(s) 114, 182, 532, 785, 911
BstNI CCWGG 2 cut(s) 261, 690
BstNSI RCATGY 1 cut(s) 802
BstSCI CCNGG 2 cut(s) 259, 688
BstSFI CTRYAG 1 cut(s) 789
BstSNI TACGTA 1 cut(s) 1084
BstV1I GCAGC 6 cut(s) 120, 190, 775, 797, 889, 1177
BstX2I RGATCY 2 cut(s) 508, 980
BstXI CCANNNNNNTGG 1 cut(s) 234
BstYI RGATCY 2 cut(s) 508, 980
BstZ17I GTATAC 1 cut(s) 361
Bsu15I ATCGAT 1 cut(s) 1394
BsuI GTATCC 3 cut(s) 232, 1096, 1415
BsuRI GGCC 2 cut(s) 578, 1203
BsuTUI ATCGAT 1 cut(s) 1394
BtgZI GCGATG 1 cut(s) 296
BtsCI GGATG 2 cut(s) 361, 938
BtsIMutI CAGTG 4 cut(s) 502, 622, 723, 1470
Cac8I GCNNGC 1 cut(s) 1123
Cfr13I GGNCC 5 cut(s) 141, 224, 943, 1181, 1201
ClaI ATCGAT 1 cut(s) 1394
Csp6I GTAC 4 cut(s) 90, 389, 937, 1567
CviAII CATG 9 cut(s) 378, 536, 557, 782, 799, 940, 976, 1129, 1431
CviQI GTAC 4 cut(s) 90, 389, 937, 1567
DdeI CTNAG 6 cut(s) 104, 548, 969, 1005, 1195, 1534
DpnI GATC 9 cut(s) 102, 114, 510, 612, 629, 845, 982, 1311, 1397
DpnII GATC 9 cut(s) 100, 112, 508, 610, 627, 843, 980, 1309, 1395
Eam1104I CTCTTC 2 cut(s) 28, 503
EarI CTCTTC 2 cut(s) 28, 503
Eco105I TACGTA 1 cut(s) 1084
Eco147I AGGCCT 1 cut(s) 578
Eco24I GRGCYC 1 cut(s) 916
Eco31I GGTCTC 1 cut(s) 987
Eco47I GGWCC 4 cut(s) 141, 224, 943, 1181
Eco88I CYCGRG 1 cut(s) 674
EcoO109I RGGNCCY 1 cut(s) 1201
EcoRI GAATTC 1 cut(s) 733
EcoRII CCWGG 2 cut(s) 259, 688
EcoT38I GRGCYC 1 cut(s) 916
FaeI CATG 9 cut(s) 381, 539, 560, 785, 802, 943, 979, 1132, 1434
FalI AAGNNNNNCTT 4 cut(s) 1409, 1441, 1497, 1529
FaqI GGGAC 2 cut(s) 537, 808
FatI CATG 9 cut(s) 377, 535, 556, 781, 798, 939, 975, 1128, 1430
FblI GTMKAC 1 cut(s) 360
Fnu4HI GCNGC 7 cut(s) 109, 204, 541, 786, 789, 903, 1191
FokI GGATG 2 cut(s) 368, 945
FriOI GRGCYC 1 cut(s) 916
Fsp4HI GCNGC 7 cut(s) 109, 204, 541, 786, 789, 903, 1191
FspBI CTAG 5 cut(s) 93, 384, 917, 1077, 1103
GluI GCNGC 7 cut(s) 109, 204, 541, 786, 789, 903, 1191
GsaI CCCAGC 1 cut(s) 1102
GsuI CTGGAG 1 cut(s) 747
HaeIII GGCC 2 cut(s) 578, 1203
HapII CCGG 1 cut(s) 139
Hin1II CATG 9 cut(s) 381, 539, 560, 785, 802, 943, 979, 1132, 1434
HincII GTYRAC 2 cut(s) 796, 1320
HindII GTYRAC 2 cut(s) 796, 1320
HinfI GANTC 6 cut(s) 302, 672, 821, 1136, 1170, 1391
HpaI GTTAAC 1 cut(s) 796
HpaII CCGG 1 cut(s) 139
HphI GGTGA 5 cut(s) 238, 620, 628, 971, 1146
Hpy166II GTNNAC 4 cut(s) 361, 421, 796, 1320
Hpy188I TCNGA 7 cut(s) 105, 992, 1058, 1090, 1198, 1218, 1388
Hpy188III TCNNGA 5 cut(s) 15, 384, 818, 1012, 1549
Hpy8I GTNNAC 4 cut(s) 361, 421, 796, 1320
Hpy99I CGWCG 1 cut(s) 745
HpyAV CCTTC 5 cut(s) 191, 334, 422, 1169, 1411
HpyCH4III ACNGT 1 cut(s) 1474
HpyCH4IV ACGT 1 cut(s) 1083
HpyF10VI GCNNNNNNNGC 5 cut(s) 114, 182, 532, 785, 911
HpyF3I CTNAG 6 cut(s) 104, 548, 969, 1005, 1195, 1534
HpySE526I ACGT 1 cut(s) 1083
Hsp92II CATG 9 cut(s) 381, 539, 560, 785, 802, 943, 979, 1132, 1434
KspAI GTTAAC 1 cut(s) 796
Kzo9I GATC 9 cut(s) 100, 112, 508, 610, 627, 843, 980, 1309, 1395
LguI GCTCTTC 1 cut(s) 28
LmnI GCTCC 1 cut(s) 745
Lsp1109I GCAGC 6 cut(s) 120, 190, 775, 797, 889, 1177
LweI GCATC 2 cut(s) 1233, 1494
MaeI CTAG 5 cut(s) 93, 384, 917, 1077, 1103
MaeII ACGT 1 cut(s) 1083
MaeIII GTNAC 6 cut(s) 490, 665, 757, 959, 1152, 1466
MalI GATC 9 cut(s) 102, 114, 510, 612, 629, 845, 982, 1311, 1397
MboI GATC 9 cut(s) 100, 112, 508, 610, 627, 843, 980, 1309, 1395
MboII GAAGA 4 cut(s) 15, 335, 490, 503
MfeI CAATTG 1 cut(s) 645
MflI RGATCY 2 cut(s) 508, 980
MhlI GDGCHC 1 cut(s) 916
MluCI AATT 8 cut(s) 60, 602, 645, 733, 874, 1028, 1353, 1552
MlyI GAGTC 3 cut(s) 666, 830, 1130
MmeI TCCRAC 2 cut(s) 970, 1113
MseI TTAA 5 cut(s) 33, 795, 1305, 1410, 1515
MslI CAYNNNNRTG 1 cut(s) 851
MspA1I CMGCKG 2 cut(s) 155, 788
MspI CCGG 1 cut(s) 139
MspR9I CCNGG 2 cut(s) 261, 690
MunI CAATTG 1 cut(s) 645
MvaI CCWGG 2 cut(s) 261, 690
MwoI GCNNNNNNNGC 5 cut(s) 114, 182, 532, 785, 911
NdeII GATC 9 cut(s) 100, 112, 508, 610, 627, 843, 980, 1309, 1395
NlaIII CATG 9 cut(s) 381, 539, 560, 785, 802, 943, 979, 1132, 1434
NlaIV GGNNCC 3 cut(s) 687, 747, 945
NmuCI GTSAC 4 cut(s) 490, 757, 959, 1152
NspI RCATGY 1 cut(s) 802
OliI CACNNNNGTG 1 cut(s) 851
PceI AGGCCT 1 cut(s) 578
PciI ACATGT 1 cut(s) 798
PciSI GCTCTTC 1 cut(s) 28
PfeI GAWTC 3 cut(s) 302, 1170, 1391
PflFI GACNNNGTC 1 cut(s) 1150
PkrI GCNGC 7 cut(s) 110, 205, 542, 787, 790, 904, 1192
Ple19I CGATCG 1 cut(s) 115
PleI GAGTC 3 cut(s) 666, 829, 1130
PpsI GAGTC 3 cut(s) 666, 829, 1130
Ppu21I YACGTR 1 cut(s) 1084
PscI ACATGT 1 cut(s) 798
PsiI TTATAA 2 cut(s) 597, 1503
Psp6I CCWGG 2 cut(s) 259, 688
PspFI CCCAGC 1 cut(s) 1098
PspGI CCWGG 2 cut(s) 259, 688
PspN4I GGNNCC 3 cut(s) 687, 747, 945
PspPI GGNCC 5 cut(s) 141, 224, 943, 1181, 1201
PstI CTGCAG 1 cut(s) 793
PsuI RGATCY 2 cut(s) 508, 980
PsyI GACNNNGTC 1 cut(s) 1150
PvuI CGATCG 1 cut(s) 115
PvuII CAGCTG 2 cut(s) 155, 788
RgaI GCGATCGC 1 cut(s) 115
RsaI GTAC 4 cut(s) 91, 390, 938, 1568
RsaNI GTAC 4 cut(s) 90, 389, 937, 1567
RseI CAYNNNNRTG 1 cut(s) 851
SapI GCTCTTC 1 cut(s) 28
SaqAI TTAA 5 cut(s) 33, 795, 1305, 1410, 1515
SatI GCNGC 7 cut(s) 109, 204, 541, 786, 789, 903, 1191
Sau3AI GATC 9 cut(s) 100, 112, 508, 610, 627, 843, 980, 1309, 1395
Sau96I GGNCC 5 cut(s) 141, 224, 943, 1181, 1201
ScaI AGTACT 3 cut(s) 91, 390, 1568
SchI GAGTC 3 cut(s) 666, 830, 1130
ScrFI CCNGG 2 cut(s) 261, 690
SduI GDGCHC 1 cut(s) 916
SfaAI GCGATCGC 1 cut(s) 115
SfaNI GCATC 2 cut(s) 1233, 1494
SfcI CTRYAG 1 cut(s) 789
SgfI GCGATCGC 1 cut(s) 115
SinI GGWCC 4 cut(s) 141, 224, 943, 1181
SmiMI CAYNNNNRTG 1 cut(s) 851
SnaBI TACGTA 1 cut(s) 1084
SpeI ACTAGT 1 cut(s) 92
Sse9I AATT 8 cut(s) 60, 602, 645, 733, 874, 1028, 1353, 1552
SseBI AGGCCT 1 cut(s) 578
SsiI CCGC 2 cut(s) 540, 584
SspI AATATT 1 cut(s) 37
SspMI CTAG 5 cut(s) 93, 384, 917, 1077, 1103
StuI AGGCCT 1 cut(s) 578
StyD4I CCNGG 2 cut(s) 259, 688
TaaI ACNGT 1 cut(s) 1474
TaiI ACGT 1 cut(s) 1086
TaqI TCGA 3 cut(s) 1394, 1477, 1497
TaqII GACCGA 1 cut(s) 1011
TasI AATT 8 cut(s) 60, 602, 645, 733, 874, 1028, 1353, 1552
TatI WGTACW 3 cut(s) 89, 388, 1566
TauI GCSGC 1 cut(s) 543
TfiI GAWTC 3 cut(s) 302, 1170, 1391
Tru1I TTAA 5 cut(s) 33, 795, 1305, 1410, 1515
Tru9I TTAA 5 cut(s) 33, 795, 1305, 1410, 1515
TscAI CASTG 4 cut(s) 509, 629, 730, 1477
TseFI GTSAC 4 cut(s) 490, 757, 959, 1152
TseI GCWGC 6 cut(s) 108, 203, 785, 788, 902, 1190
Tsp45I GTSAC 4 cut(s) 490, 757, 959, 1152
TspDTI ATGAA 6 cut(s) 168, 210, 225, 294, 353, 474
TspGWI ACGGA 2 cut(s) 684, 758
TspRI CASTG 4 cut(s) 509, 629, 730, 1477
Tth111I GACNNNGTC 1 cut(s) 1150
VpaK11BI GGWCC 4 cut(s) 141, 224, 943, 1181
XapI RAATTY 4 cut(s) 602, 733, 874, 1552
XbaI TCTAGA 1 cut(s) 383
XceI RCATGY 1 cut(s) 802
XmiI GTMKAC 1 cut(s) 360
XspI CTAG 5 cut(s) 93, 384, 917, 1077, 1103
ZrmI AGTACT 3 cut(s) 91, 390, 1568
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.