Prupe.4G165800_v2.0.a1

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0000117
Physical Location & Seq
Forward (+)
9619422 .. 9624744
5323 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G165800.1

Sequence Viewer

Length: 1590 bp
ATGAATCAAGATCACCACAACACAAACAAACGCCTAGTGATGGAAAAACAATTAAGGTCTTTGATGTTAGGTGTGGGGGAGCTGCTGCTGCTGGTTTGCTTTGCATTATTGACGAATAACAAAGCTGTTGCTCTCCTCAACAGGAGCAGTTTTCCTCCAGGTTTCATATTTGGCTCAGGTTCAGGATCTTACCAGTATGAAGGCGCTGCAAATGAAGGTGGTCGAGGACCAAGCATCTGGGATTCTTACACCCACAAACATCCAGAAAGGATCATGGATGGCAGCAATGGAGATGTTGCTCTGGATGAATATCACAAGTATAAGGAAGATGTGGAAATTATGAAGGATATAGGCTTGGATGCTTATAGGTTTTCTATTTCATGGCCCAGATTATTACCAAGTGGAAAGTTAAATGATGGTGTGAATGAGGTTGGAATCAGATACTACAACAATCTAATCAATGAACTTCTCAGAAATGGTATAAAGCCATTTGTCACACTTTTTCATTGGGATCTTCCTCAAGCTTTGGAAGACGAATATGGTGGTCTTTTAAGCGATCAAATTGTCAATCATTTTCGAGACTATGCAGAACTTTGTTATAAGGAATTTGGTGATCGAGTAAAGTACTGGACCACATTGAATGAGCCATATACCTATAGTATCAATGGTTATGCTTCTGGGTCTTATGCACCAGGACGATGTTCTAATTGGCAGAAATTAAATTGCACTGGTGGAAATTCGGCTATTGAACCATATTTGGTGACTCACCACCTTCTACTTGCTCATGCTGCTGCTGCAAACTTGTATAAGAATAAATTTCAGGCATATCAAAAAGGTGTGATAGGAATAACGCTCGTGTCACCATGGTTTGTGCCTCTTTCAGAGGCAAATGAAGATAAAAAGGCTGCATTACGAGCATTGGAGTTTACTTTTGGATGGTTTATGGAACCATTGACATGTGGTGATTATCCGAACAACATGCGATCTATTGTTGGAACGCGCTTACCAAAATTCACAAAAGCACAATCCAAGACGCTAATTGGGTCATTTGATTTTCTTGGACTAAATTACTACACTAGTTACTATGCAAGCGATGCATCTAATAATGTTTATGAACATGCAAGCTACTTAACAGATGTTGGAGTGACTCTTTCATCTGAGCGGAATGGGATTCCCATTGGTGCAAAGGGTGCTTCAAGCTGGCTAAATGTTTATCCAATAGGAATTCAAAATTTGTTACTGTACACGAAGGAAAAGTATAATGATCCAATCATTTACATTACTGAGAATGGCATTGATGAATTTAATGATCCAAAGTTATCGCTTGAGGAAGCTCTTTATGATACCCAAAGAGTTGACTATCACATTCTTCACCTCTATCACGTTCAAACTGCAATCAAAAATGGTGTCAACGTGAAGGGATACTTTCTATGGTCATTACTAGACAACTTTGAATGGAACGAGGGATTCACTGTTCGATTTGGTACCAATTATGTGGATTACAATAATGGGCTGAAAAGACTACCAAAACTCTCAACTCGGTGGTTCAAAAGTTTCCTAGGAAGTAATGAAGAAGCTTATTATTCATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110
Pfam Domains
Protein Families
Glyco_hydro_1

Protein Analysis

530

Amino Acids

60.13

Weight (kDa)

5.99

Isoelectric Point (pI)

26.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 600
Acc65I GGTACC 1 cut(s) 1484
AccB1I GGYRCC 1 cut(s) 1484
AccBSI CCGCTC 1 cut(s) 1162
AccII CGCG 1 cut(s) 1000
AciI CCGC 1 cut(s) 1162
AclWI GGATC 5 cut(s) 193, 278, 519, 1259, 1304
AcsI RAATTY 7 cut(s) 605, 736, 815, 1010, 1224, 1231, 1301
AfaI GTAC 3 cut(s) 626, 1244, 1486
AfiI CCNNNNNNNGG 1 cut(s) 40
AflIII ACRYGT 1 cut(s) 956
AgsI TTSAA 7 cut(s) 640, 749, 1197, 1229, 1388, 1454, 1549
AhlI ACTAGT 1 cut(s) 1076
AjnI CCWGG 2 cut(s) 157, 691
AloI GAACNNNNNNTCC 2 cut(s) 1458, 1490
AluBI AGCT 7 cut(s) 82, 125, 524, 1125, 1200, 1334, 1577
AluI AGCT 7 cut(s) 82, 125, 524, 1125, 1200, 1334, 1577
Alw26I GTCTC 1 cut(s) 573
AlwI GGATC 5 cut(s) 193, 278, 519, 1259, 1304
AoxI GGCC 1 cut(s) 383
ApeKI GCWGC 9 cut(s) 82, 85, 88, 206, 282, 788, 791, 794, 905
ApoI RAATTY 7 cut(s) 605, 736, 815, 1010, 1224, 1231, 1301
ArsI GACNNNNNNTTYG 2 cut(s) 1392, 1424
Asp718I GGTACC 1 cut(s) 1484
AspA2I CCTAGG 1 cut(s) 1558
AspLEI GCGC 2 cut(s) 206, 1002
AspS9I GGNCC 3 cut(s) 227, 384, 630
AsuHPI GGTGA 7 cut(s) 5, 623, 758, 772, 852, 974, 1364
AvaII GGWCC 2 cut(s) 227, 630
AvrII CCTAGG 1 cut(s) 1558
BanI GGYRCC 1 cut(s) 1484
BauI CACGAG 1 cut(s) 854
BbsI GAAGAC 1 cut(s) 537
BbvI GCAGC 9 cut(s) 69, 72, 75, 193, 294, 775, 778, 781, 892
BccI CCATC 4 cut(s) 34, 272, 410, 930
BcgI CGANNNNNNTGC 2 cut(s) 961, 995
BciT130I CCWGG 2 cut(s) 159, 693
BciVI GTATCC 1 cut(s) 1415
BcoDI GTCTC 1 cut(s) 573
BcuI ACTAGT 1 cut(s) 1076
BfaI CTAG 4 cut(s) 35, 1077, 1442, 1559
BfmI CTRYAG 1 cut(s) 655
BfoI RGCGCY 1 cut(s) 207
BfuI GTATCC 1 cut(s) 1415
BisI GCNGC 9 cut(s) 83, 86, 89, 207, 283, 789, 792, 795, 906
BlnI CCTAGG 1 cut(s) 1558
BlsI GCNGC 9 cut(s) 84, 87, 90, 208, 284, 790, 793, 796, 907
BmcAI AGTACT 1 cut(s) 626
Bme1390I CCNGG 2 cut(s) 159, 693
Bme18I GGWCC 2 cut(s) 227, 630
BmgT120I GGNCC 3 cut(s) 227, 384, 630
BmiI GGNNCC 2 cut(s) 948, 1486
BmrFI CCNGG 2 cut(s) 159, 693
BmsI GCATC 4 cut(s) 243, 349, 1084, 1106
BpiI GAAGAC 1 cut(s) 537
BpmI CTGGAG 1 cut(s) 141
Bpu10I CCTNAGC 1 cut(s) 175
BpuEI CTTGAG 2 cut(s) 504, 1346
BsaBI GATNNNNATC 1 cut(s) 309
BsaJI CCNNGG 2 cut(s) 863, 1558
Bsc4I CCNNNNNNNGG 1 cut(s) 40
Bse1I ACTGG 3 cut(s) 193, 632, 733
Bse3DI GCAATG 1 cut(s) 292
Bse8I GATNNNNATC 1 cut(s) 309
BseBI CCWGG 2 cut(s) 159, 693
BseDI CCNNGG 2 cut(s) 863, 1558
BseGI GGATG 5 cut(s) 259, 283, 310, 364, 941
BseJI GATNNNNATC 1 cut(s) 309
BseLI CCNNNNNNNGG 1 cut(s) 40
BseMI GCAATG 1 cut(s) 292
BseMII CTCAG 4 cut(s) 189, 484, 1149, 1275
BseNI ACTGG 3 cut(s) 193, 632, 733
BseRI GAGGAG 1 cut(s) 125
BseXI GCAGC 9 cut(s) 69, 72, 75, 193, 294, 775, 778, 781, 892
Bsh1236I CGCG 1 cut(s) 1000
BshFI GGCC 1 cut(s) 385
BshNI GGYRCC 1 cut(s) 1484
BslI CCNNNNNNNGG 1 cut(s) 40
BsmAI GTCTC 1 cut(s) 573
BsnI GGCC 1 cut(s) 385
Bsp1407I TGTACA 1 cut(s) 1242
Bsp143I GATC 9 cut(s) 10, 185, 270, 511, 556, 613, 983, 1264, 1309
Bsp19I CCATGG 1 cut(s) 863
BspACI CCGC 1 cut(s) 1162
BspANI GGCC 1 cut(s) 385
BspCNI CTCAG 4 cut(s) 188, 483, 1150, 1276
BspFNI CGCG 1 cut(s) 1000
BspLI GGNNCC 2 cut(s) 948, 1486
BspPI GGATC 5 cut(s) 193, 278, 519, 1259, 1304
BspT107I GGYRCC 1 cut(s) 1484
BsrBI CCGCTC 1 cut(s) 1162
BsrDI GCAATG 1 cut(s) 292
BsrGI TGTACA 1 cut(s) 1242
BsrI ACTGG 3 cut(s) 193, 632, 733
BssECI CCNNGG 2 cut(s) 863, 1558
BssMI GATC 9 cut(s) 10, 185, 270, 511, 556, 613, 983, 1264, 1309
BssSI CACGAG 1 cut(s) 854
BssT1I CCWWGG 2 cut(s) 863, 1558
Bst2BI CACGAG 1 cut(s) 854
Bst2UI CCWGG 2 cut(s) 159, 693
Bst4CI ACNGT 2 cut(s) 1242, 1474
BstAPI GCANNNNNTGC 2 cut(s) 1094, 1190
BstAUI TGTACA 1 cut(s) 1242
BstC8I GCNNGC 3 cut(s) 1090, 1123, 1202
BstDEI CTNAG 4 cut(s) 175, 470, 1158, 1284
BstDSI CCRYGG 1 cut(s) 863
BstF5I GGATG 5 cut(s) 259, 283, 310, 364, 941
BstFNI CGCG 1 cut(s) 1000
BstH2I RGCGCY 1 cut(s) 207
BstHHI GCGC 2 cut(s) 206, 1002
BstKTI GATC 9 cut(s) 13, 188, 273, 514, 559, 616, 986, 1267, 1312
BstMAI GTCTC 1 cut(s) 573
BstMBI GATC 9 cut(s) 10, 185, 270, 511, 556, 613, 983, 1264, 1309
BstMWI GCNNNNNNNGC 6 cut(s) 88, 788, 794, 914, 1094, 1190
BstNI CCWGG 2 cut(s) 159, 693
BstNSI RCATGY 3 cut(s) 960, 982, 1121
BstSCI CCNGG 2 cut(s) 157, 691
BstSFI CTRYAG 1 cut(s) 655
BstUI CGCG 1 cut(s) 1000
BstV1I GCAGC 9 cut(s) 69, 72, 75, 193, 294, 775, 778, 781, 892
BstV2I GAAGAC 1 cut(s) 537
BstX2I RGATCY 2 cut(s) 185, 511
BstXI CCANNNNNNTGG 2 cut(s) 237, 1495
BstYI RGATCY 2 cut(s) 185, 511
BsuI GTATCC 1 cut(s) 1415
BsuRI GGCC 1 cut(s) 385
BtgI CCRYGG 1 cut(s) 863
BtgZI GCGATG 1 cut(s) 1107
BtsCI GGATG 5 cut(s) 259, 283, 310, 364, 941
BtsIMutI CAGTG 2 cut(s) 726, 1470
Cac8I GCNNGC 3 cut(s) 1090, 1123, 1202
CfoI GCGC 2 cut(s) 206, 1002
Cfr13I GGNCC 3 cut(s) 227, 384, 630
CseI GACGC 1 cut(s) 1042
Csp6I GTAC 3 cut(s) 625, 1243, 1485
CviAII CATG 7 cut(s) 274, 381, 785, 864, 957, 979, 1118
CviQI GTAC 3 cut(s) 625, 1243, 1485
DdeI CTNAG 4 cut(s) 175, 470, 1158, 1284
DpnI GATC 9 cut(s) 12, 187, 272, 513, 558, 615, 985, 1266, 1311
DpnII GATC 9 cut(s) 10, 185, 270, 511, 556, 613, 983, 1264, 1309
Eco130I CCWWGG 2 cut(s) 863, 1558
Eco47I GGWCC 2 cut(s) 227, 630
EcoRI GAATTC 1 cut(s) 1224
EcoRII CCWGG 2 cut(s) 157, 691
EcoT14I CCWWGG 2 cut(s) 863, 1558
EcoT22I ATGCAT 1 cut(s) 1099
ErhI CCWWGG 2 cut(s) 863, 1558
FaeI CATG 7 cut(s) 277, 384, 788, 867, 960, 982, 1121
FalI AAGNNNNNCTT 2 cut(s) 1409, 1441
FatI CATG 7 cut(s) 273, 380, 784, 863, 956, 978, 1117
Fnu4HI GCNGC 9 cut(s) 83, 86, 89, 207, 283, 789, 792, 795, 906
FokI GGATG 5 cut(s) 246, 290, 317, 371, 948
Fsp4HI GCNGC 9 cut(s) 83, 86, 89, 207, 283, 789, 792, 795, 906
FspBI CTAG 4 cut(s) 35, 1077, 1442, 1559
GlaI GCGC 2 cut(s) 205, 1001
GluI GCNGC 9 cut(s) 83, 86, 89, 207, 283, 789, 792, 795, 906
GsuI CTGGAG 1 cut(s) 141
HaeII RGCGCY 1 cut(s) 207
HaeIII GGCC 1 cut(s) 385
HgaI GACGC 1 cut(s) 1042
HhaI GCGC 2 cut(s) 206, 1002
Hin1II CATG 7 cut(s) 277, 384, 788, 867, 960, 982, 1121
Hin6I GCGC 2 cut(s) 204, 1000
HinP1I GCGC 2 cut(s) 204, 1000
HincII GTYRAC 2 cut(s) 1357, 1411
HindII GTYRAC 2 cut(s) 1357, 1411
HindIII AAGCTT 2 cut(s) 522, 1575
HinfI GANTC 7 cut(s) 4, 242, 435, 763, 1147, 1171, 1467
HphI GGTGA 7 cut(s) 5, 623, 758, 772, 852, 974, 1364
Hpy166II GTNNAC 4 cut(s) 927, 1245, 1357, 1411
Hpy188I TCNGA 5 cut(s) 440, 473, 883, 972, 1159
Hpy188III TCNNGA 5 cut(s) 8, 183, 263, 302, 578
Hpy8I GTNNAC 4 cut(s) 927, 1245, 1357, 1411
HpyAV CCTTC 6 cut(s) 194, 209, 337, 782, 1243, 1411
HpyCH4III ACNGT 2 cut(s) 1242, 1474
HpyCH4IV ACGT 2 cut(s) 1383, 1413
HpyF10VI GCNNNNNNNGC 6 cut(s) 88, 788, 794, 914, 1094, 1190
HpyF3I CTNAG 4 cut(s) 175, 470, 1158, 1284
HpySE526I ACGT 2 cut(s) 1383, 1413
Hsp92II CATG 7 cut(s) 277, 384, 788, 867, 960, 982, 1121
HspAI GCGC 2 cut(s) 204, 1000
KpnI GGTACC 1 cut(s) 1488
Kzo9I GATC 9 cut(s) 10, 185, 270, 511, 556, 613, 983, 1264, 1309
LmnI GCTCC 2 cut(s) 79, 144
Lsp1109I GCAGC 9 cut(s) 69, 72, 75, 193, 294, 775, 778, 781, 892
LweI GCATC 4 cut(s) 243, 349, 1084, 1106
MaeI CTAG 4 cut(s) 35, 1077, 1442, 1559
MaeII ACGT 2 cut(s) 1383, 1413
MaeIII GTNAC 6 cut(s) 493, 760, 858, 1079, 1144, 1236
MalI GATC 9 cut(s) 12, 187, 272, 513, 558, 615, 985, 1266, 1311
MbiI CCGCTC 1 cut(s) 1162
MboI GATC 9 cut(s) 10, 185, 270, 511, 556, 613, 983, 1264, 1309
MboII GAAGA 6 cut(s) 338, 506, 542, 905, 1361, 1583
MflI RGATCY 2 cut(s) 185, 511
MlyI GAGTC 2 cut(s) 757, 1141
MmeI TCCRAC 3 cut(s) 412, 973, 1120
Mph1103I ATGCAT 1 cut(s) 1099
MseI TTAA 6 cut(s) 53, 410, 551, 719, 1130, 1305
MslI CAYNNNNRTG 1 cut(s) 955
MspR9I CCNGG 2 cut(s) 159, 693
MvaI CCWGG 2 cut(s) 159, 693
MvnI CGCG 1 cut(s) 1000
MwoI GCNNNNNNNGC 6 cut(s) 88, 788, 794, 914, 1094, 1190
NcoI CCATGG 1 cut(s) 863
NdeII GATC 9 cut(s) 10, 185, 270, 511, 556, 613, 983, 1264, 1309
NlaIII CATG 7 cut(s) 277, 384, 788, 867, 960, 982, 1121
NlaIV GGNNCC 2 cut(s) 948, 1486
NmuCI GTSAC 4 cut(s) 493, 760, 858, 1144
NsiI ATGCAT 1 cut(s) 1099
NspI RCATGY 3 cut(s) 960, 982, 1121
PciI ACATGT 1 cut(s) 956
PfeI GAWTC 5 cut(s) 4, 242, 435, 1171, 1467
PkrI GCNGC 9 cut(s) 84, 87, 90, 208, 284, 790, 793, 796, 907
PleI GAGTC 2 cut(s) 757, 1141
PpsI GAGTC 2 cut(s) 757, 1141
PscI ACATGT 1 cut(s) 956
PsiI TTATAA 1 cut(s) 600
Psp6I CCWGG 2 cut(s) 157, 691
PspGI CCWGG 2 cut(s) 157, 691
PspN4I GGNNCC 2 cut(s) 948, 1486
PspPI GGNCC 3 cut(s) 227, 384, 630
PsuI RGATCY 2 cut(s) 185, 511
RsaI GTAC 3 cut(s) 626, 1244, 1486
RsaNI GTAC 3 cut(s) 625, 1243, 1485
RseI CAYNNNNRTG 1 cut(s) 955
SaqAI TTAA 6 cut(s) 53, 410, 551, 719, 1130, 1305
SatI GCNGC 9 cut(s) 83, 86, 89, 207, 283, 789, 792, 795, 906
Sau3AI GATC 9 cut(s) 10, 185, 270, 511, 556, 613, 983, 1264, 1309
Sau96I GGNCC 3 cut(s) 227, 384, 630
ScaI AGTACT 1 cut(s) 626
SchI GAGTC 2 cut(s) 757, 1141
ScrFI CCNGG 2 cut(s) 159, 693
SfaNI GCATC 4 cut(s) 243, 349, 1084, 1106
SfcI CTRYAG 1 cut(s) 655
SinI GGWCC 2 cut(s) 227, 630
SmiMI CAYNNNNRTG 1 cut(s) 955
SmlI CTYRAG 2 cut(s) 519, 1325
SmoI CTYRAG 2 cut(s) 519, 1325
SpeI ACTAGT 1 cut(s) 1076
SsiI CCGC 1 cut(s) 1162
SspMI CTAG 4 cut(s) 35, 1077, 1442, 1559
StyD4I CCNGG 2 cut(s) 157, 691
StyI CCWWGG 2 cut(s) 863, 1558
TaaI ACNGT 2 cut(s) 1242, 1474
TaiI ACGT 2 cut(s) 1386, 1416
TaqI TCGA 4 cut(s) 223, 577, 616, 1477
TatI WGTACW 2 cut(s) 624, 1242
TfiI GAWTC 5 cut(s) 4, 242, 435, 1171, 1467
Tru1I TTAA 6 cut(s) 53, 410, 551, 719, 1130, 1305
Tru9I TTAA 6 cut(s) 53, 410, 551, 719, 1130, 1305
TscAI CASTG 2 cut(s) 733, 1477
TseFI GTSAC 4 cut(s) 493, 760, 858, 1144
TseI GCWGC 9 cut(s) 82, 85, 88, 206, 282, 788, 791, 794, 905
Tsp45I GTSAC 4 cut(s) 493, 760, 858, 1144
TspRI CASTG 2 cut(s) 733, 1477
VpaK11BI GGWCC 2 cut(s) 227, 630
XapI RAATTY 7 cut(s) 605, 736, 815, 1010, 1224, 1231, 1301
XceI RCATGY 3 cut(s) 960, 982, 1121
XmaJI CCTAGG 1 cut(s) 1558
XspI CTAG 4 cut(s) 35, 1077, 1442, 1559
ZrmI AGTACT 1 cut(s) 626
Zsp2I ATGCAT 1 cut(s) 1099
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.