MD11G1023900.v1.1

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
OG0000117
Physical Location & Seq
Reverse (-)
2054793 .. 2059025
4233 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1023900.v1.1.491

Sequence Viewer

Length: 1593 bp
ATGCCAAGAAGAGCAAAAACCAGTCTGGATCACCAGAAACCCTTAGTTATGGCAATGAAACTTGATTCTTTGCTGTTGGCTGTGCTATTTATAATTGGCATTGCATTGACAAACGCTAAAAAATCTCCTGTTATACCTAGTCGTTATAGCACTACCAGCCTCAACAGGACCAGTTTTCCTAGAGGGTTCATATTTGGCTCAGCTTCATCAGCTTACCAATATGAAGGTGCATGGAATCAAGGTGGTAGAAAACCAAGCATTTGGGATAACTACACCCACCAGTATCCAGAAAGGATCAATGGTAGCACCACTGGAGATGTAGCTGCTGATCAATATCACCGTTATAAGGAAGATGTAGGGATTATGAAGAATATGGGCTTGGATGCTTATAGGTTATCTATCTCATGGTCCAGAGTATTACCAAATGGAAAGCTAAGTGGGGGTGTGAACCAAGAAGGAATCAAATACTACAATAATCTCATCAATGCACTCCTAAGCAGAGGTCTAAAGCCATTCGTGACAATCTTCCATTGGGATCTTCCCCAAGCGTTAGAAGAAGAATACGGGGGTTTCTTAAGCCCAAAAATTGTCAATCATTTTCGAGATTTCGCTGAAATTTGTTATAAGGCATTTGGTGACCGAGTGAAGCATTGGATGACCTTGAACGAGCCATGGACCTATGCAGTTAATGGTTATGCAGAAGGAGCTTTCGCACCAGGAAGATGTTCAGCTTGGATGGAGCGAAACTGTACTGGTGGAGATTCTGGTACTGAACCATATTTGGTGGCACACAACTTCCTCCTTGCTCATGCAGCTGCAGTAAAGCTGTACAGATACAAATATCAGAAAATTCAGAGGGGCGTAATAGGGATGGCACTAGGGGTACATTGGTTTGTGCCTGTTTCTAACAGCACGCGCCATCAAAATGCTGCATTACGATCTTTGGATTTTATGCTTGGATGGTTTATGGAGCCATTGACAAGTGGTAGTTATCCACACACCATGAAAGTTCTTGTTGGAAAACGATTACCTGTATTCACGGCAGAACAATCCAAGTTAATAAAAGGGTCATATGACTTCATTGGAATAAATTACTATACTACTCATTATTCAAGCTATGCACCTCACAATAATTCTCTAAATGCAAGTTACTTGACTGATGCTCGCGTTTTTCAATCACCATTGCATAATGGGGTCCCTATTGGTCCGCCGGGTGCTTCAAGCTGGCTATATGTTTATCCTAAAGGACTTCAAGAACTTTTAGTTTACACAAAGAAAAATTATCAAAATCCTCTCATTTACATTACTGAGAACGGCATTGATGAGTGGAATGATCCCACATTATCACTTGAGAAATCTCTCAATGACACCCATAGAATTGATTACATCTATCAGCACCTCGATTACCTTAACAGAGCAATCAAGGATGGTGTCAATGTGAAAGGATACTTTTCATGGTCGTTACTAGACAATTTTGAATGGTCTGCTGGATACACAGTACGGTTTGGTTTGATCTTTGTGGATTTCAATGATGGGCAAAAAAGGCATTCAAAACTGTCAGCACGATGGTTCAAAAATTTCTTGAAAGAGTAG

Protein Analysis

531

Amino Acids

60.36

Weight (kDa)

9.3

Isoelectric Point (pI)

27.87

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 57 - 529 3.5e-161 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 92, 345, 624
AccII CGCG 2 cut(s) 916, 1167
AciI CCGC 1 cut(s) 1208
AclWI GGATC 4 cut(s) 36, 302, 543, 1328
AcsI RAATTY 3 cut(s) 615, 849, 1576
AfaI GTAC 5 cut(s) 751, 769, 830, 885, 1500
AfiI CCNNNNNNNGG 1 cut(s) 346
AflII CTTAAG 1 cut(s) 574
AjnI CCWGG 1 cut(s) 715
AjuI GAANNNNNNNTTGG 2 cut(s) 362, 394
AlwI GGATC 4 cut(s) 36, 302, 543, 1328
ApeKI GCWGC 4 cut(s) 323, 812, 815, 929
ApoI RAATTY 3 cut(s) 615, 849, 1576
Asp700I GAANNNNTTC 1 cut(s) 724
AspLEI GCGC 1 cut(s) 918
AspS9I GGNCC 5 cut(s) 168, 408, 675, 1195, 1205
AsuC2I CCSGG 1 cut(s) 1212
AsuHPI GGTGA 4 cut(s) 23, 329, 647, 1170
AvaII GGWCC 5 cut(s) 168, 408, 675, 1195, 1205
BaeI ACNNNNGTAYC 2 cut(s) 875, 908
BbvI GCAGC 4 cut(s) 310, 802, 824, 916
BccI CCATC 7 cut(s) 730, 865, 927, 954, 1421, 1526, 1560
BceAI ACGGC 2 cut(s) 1056, 1330
BciT130I CCWGG 1 cut(s) 717
BciVI GTATCC 3 cut(s) 294, 1439, 1484
BclI TGATCA 1 cut(s) 328
BcnI CCSGG 1 cut(s) 1212
BfaI CTAG 4 cut(s) 138, 180, 878, 1466
BfmI CTRYAG 1 cut(s) 816
BfrI CTTAAG 1 cut(s) 574
BfuI GTATCC 3 cut(s) 294, 1439, 1484
BisI GCNGC 4 cut(s) 324, 813, 816, 930
BlpI GCTNAGC 1 cut(s) 199
BlsI GCNGC 4 cut(s) 325, 814, 817, 931
Bme1390I CCNGG 2 cut(s) 717, 1212
Bme18I GGWCC 5 cut(s) 168, 408, 675, 1195, 1205
BmgT120I GGNCC 5 cut(s) 168, 408, 675, 1195, 1205
BmiI GGNNCC 3 cut(s) 972, 1196, 1197
BmrFI CCNGG 2 cut(s) 717, 1212
BmsI GCATC 2 cut(s) 373, 1150
BpmI CTGGAG 1 cut(s) 333
Bpu10I CCTNAGC 1 cut(s) 494
Bpu1102I GCTNAGC 1 cut(s) 199
BpuEI CTTGAG 1 cut(s) 1370
BpuMI CCSGG 1 cut(s) 1212
BsaBI GATNNNNATC 1 cut(s) 333
BsaJI CCNNGG 1 cut(s) 671
Bsc4I CCNNNNNNNGG 1 cut(s) 346
Bse1I ACTGG 5 cut(s) 21, 171, 280, 316, 757
Bse3DI GCAATG 3 cut(s) 60, 99, 1181
Bse8I GATNNNNATC 1 cut(s) 333
BseBI CCWGG 1 cut(s) 717
BseDI CCNNGG 1 cut(s) 671
BseGI GGATG 6 cut(s) 388, 660, 741, 876, 965, 1432
BseJI GATNNNNATC 1 cut(s) 333
BseLI CCNNNNNNNGG 1 cut(s) 346
BseMI GCAATG 3 cut(s) 60, 99, 1181
BseMII CTCAG 2 cut(s) 213, 1299
BseNI ACTGG 5 cut(s) 21, 171, 280, 316, 757
BseXI GCAGC 4 cut(s) 310, 802, 824, 916
Bsh1236I CGCG 2 cut(s) 916, 1167
BsiSI CCGG 1 cut(s) 1211
BslFI GGGAC 1 cut(s) 1181
BslI CCNNNNNNNGG 1 cut(s) 346
BsmFI GGGAC 1 cut(s) 1181
BsmI GAATGC 1 cut(s) 1546
Bsp1407I TGTACA 1 cut(s) 828
Bsp143I GATC 7 cut(s) 28, 294, 328, 535, 938, 1333, 1512
Bsp1720I GCTNAGC 1 cut(s) 199
Bsp19I CCATGG 1 cut(s) 671
BspACI CCGC 1 cut(s) 1208
BspCNI CTCAG 2 cut(s) 212, 1300
BspFNI CGCG 2 cut(s) 916, 1167
BspLI GGNNCC 3 cut(s) 972, 1196, 1197
BspMAI CTGCAG 1 cut(s) 820
BspPI GGATC 4 cut(s) 36, 302, 543, 1328
BspQI GCTCTTC 1 cut(s) 4
BspTI CTTAAG 1 cut(s) 574
BsrDI GCAATG 3 cut(s) 60, 99, 1181
BsrGI TGTACA 1 cut(s) 828
BsrI ACTGG 5 cut(s) 21, 171, 280, 316, 757
BssECI CCNNGG 1 cut(s) 671
BssMI GATC 7 cut(s) 28, 294, 328, 535, 938, 1333, 1512
BssT1I CCWWGG 1 cut(s) 671
Bst2UI CCWGG 1 cut(s) 717
Bst4CI ACNGT 5 cut(s) 341, 749, 1498, 1503, 1557
Bst6I CTCTTC 1 cut(s) 4
BstAFI CTTAAG 1 cut(s) 574
BstAUI TGTACA 1 cut(s) 828
BstC8I GCNNGC 3 cut(s) 914, 1165, 1226
BstDEI CTNAG 5 cut(s) 43, 199, 434, 494, 1308
BstDSI CCRYGG 1 cut(s) 671
BstEII GGTNACC 1 cut(s) 635
BstF5I GGATG 6 cut(s) 388, 660, 741, 876, 965, 1432
BstFNI CGCG 2 cut(s) 916, 1167
BstHHI GCGC 1 cut(s) 918
BstKTI GATC 7 cut(s) 31, 297, 331, 538, 941, 1336, 1515
BstMBI GATC 7 cut(s) 28, 294, 328, 535, 938, 1333, 1512
BstMWI GCNNNNNNNGC 5 cut(s) 156, 209, 704, 812, 1543
BstNI CCWGG 1 cut(s) 717
BstPI GGTNACC 1 cut(s) 635
BstSCI CCNGG 2 cut(s) 715, 1210
BstSFI CTRYAG 1 cut(s) 816
BstUI CGCG 2 cut(s) 916, 1167
BstV1I GCAGC 4 cut(s) 310, 802, 824, 916
BstX2I RGATCY 1 cut(s) 535
BstXI CCANNNNNNTGG 1 cut(s) 261
BstYI RGATCY 1 cut(s) 535
BsuI GTATCC 3 cut(s) 294, 1439, 1484
BtgI CCRYGG 1 cut(s) 671
BtsCI GGATG 6 cut(s) 388, 660, 741, 876, 965, 1432
BtsIMutI CAGTG 1 cut(s) 309
Cac8I GCNNGC 3 cut(s) 914, 1165, 1226
CfoI GCGC 1 cut(s) 918
Cfr13I GGNCC 5 cut(s) 168, 408, 675, 1195, 1205
Csp6I GTAC 5 cut(s) 750, 768, 829, 884, 1499
CviAII CATG 6 cut(s) 231, 405, 672, 809, 1003, 1455
CviQI GTAC 5 cut(s) 750, 768, 829, 884, 1499
DdeI CTNAG 5 cut(s) 43, 199, 434, 494, 1308
DpnI GATC 7 cut(s) 30, 296, 330, 537, 940, 1335, 1514
DpnII GATC 7 cut(s) 28, 294, 328, 535, 938, 1333, 1512
Eam1104I CTCTTC 1 cut(s) 4
EarI CTCTTC 1 cut(s) 4
EciI GGCGGA 1 cut(s) 1197
Eco130I CCWWGG 1 cut(s) 671
Eco47I GGWCC 5 cut(s) 168, 408, 675, 1195, 1205
Eco91I GGTNACC 1 cut(s) 635
EcoO109I RGGNCCY 1 cut(s) 1195
EcoO65I GGTNACC 1 cut(s) 635
EcoRII CCWGG 1 cut(s) 715
EcoT14I CCWWGG 1 cut(s) 671
ErhI CCWWGG 1 cut(s) 671
FaeI CATG 6 cut(s) 234, 408, 675, 812, 1006, 1458
FaqI GGGAC 1 cut(s) 1181
FatI CATG 6 cut(s) 230, 404, 671, 808, 1002, 1454
FauNDI CATATG 1 cut(s) 1072
FbaI TGATCA 1 cut(s) 328
Fnu4HI GCNGC 4 cut(s) 324, 813, 816, 930
FokI GGATG 6 cut(s) 395, 667, 748, 883, 972, 1439
Fsp4HI GCNGC 4 cut(s) 324, 813, 816, 930
FspBI CTAG 4 cut(s) 138, 180, 878, 1466
GlaI GCGC 1 cut(s) 917
GluI GCNGC 4 cut(s) 324, 813, 816, 930
GsuI CTGGAG 1 cut(s) 333
HapII CCGG 1 cut(s) 1211
HhaI GCGC 1 cut(s) 918
Hin1II CATG 6 cut(s) 234, 408, 675, 812, 1006, 1458
Hin6I GCGC 1 cut(s) 916
HinP1I GCGC 1 cut(s) 916
HinfI GANTC 4 cut(s) 65, 235, 459, 761
HpaII CCGG 1 cut(s) 1211
HphI GGTGA 4 cut(s) 23, 329, 647, 1170
Hpy166II GTNNAC 2 cut(s) 448, 1267
Hpy188I TCNGA 2 cut(s) 846, 855
Hpy188III TCNNGA 7 cut(s) 26, 287, 411, 517, 602, 1253, 1582
Hpy8I GTNNAC 2 cut(s) 448, 1267
HpyAV CCTTC 3 cut(s) 218, 449, 695
HpyCH4III ACNGT 5 cut(s) 341, 749, 1498, 1503, 1557
HpyF10VI GCNNNNNNNGC 5 cut(s) 156, 209, 704, 812, 1543
HpyF3I CTNAG 5 cut(s) 43, 199, 434, 494, 1308
Hsp92II CATG 6 cut(s) 234, 408, 675, 812, 1006, 1458
HspAI GCGC 1 cut(s) 916
KflI GGGWCCC 1 cut(s) 1195
Ksp22I TGATCA 1 cut(s) 328
Kzo9I GATC 7 cut(s) 28, 294, 328, 535, 938, 1333, 1512
LguI GCTCTTC 1 cut(s) 4
LmnI GCTCC 3 cut(s) 704, 739, 970
Lsp1109I GCAGC 4 cut(s) 310, 802, 824, 916
LweI GCATC 2 cut(s) 373, 1150
MaeI CTAG 4 cut(s) 138, 180, 878, 1466
MaeIII GTNAC 4 cut(s) 517, 635, 1148, 1461
MalI GATC 7 cut(s) 30, 296, 330, 537, 940, 1335, 1514
MboI GATC 7 cut(s) 28, 294, 328, 535, 938, 1333, 1512
MboII GAAGA 8 cut(s) 21, 362, 379, 517, 530, 566, 569, 732
MflI RGATCY 1 cut(s) 535
MmeI TCCRAC 1 cut(s) 997
MnlI CCTC 8 cut(s) 170, 176, 494, 809, 849, 1134, 1302, 1409
MroXI GAANNNNTTC 1 cut(s) 724
MseI TTAA 4 cut(s) 575, 687, 1058, 1410
MslI CAYNNNNRTG 1 cut(s) 924
MspA1I CMGCKG 1 cut(s) 815
MspCI CTTAAG 1 cut(s) 574
MspI CCGG 1 cut(s) 1211
MspR9I CCNGG 2 cut(s) 717, 1212
Mva1269I GAATGC 1 cut(s) 1546
MvaI CCWGG 1 cut(s) 717
MvnI CGCG 2 cut(s) 916, 1167
MwoI GCNNNNNNNGC 5 cut(s) 156, 209, 704, 812, 1543
NciI CCSGG 1 cut(s) 1212
NcoI CCATGG 1 cut(s) 671
NdeI CATATG 1 cut(s) 1072
NdeII GATC 7 cut(s) 28, 294, 328, 535, 938, 1333, 1512
NlaIII CATG 6 cut(s) 234, 408, 675, 812, 1006, 1458
NlaIV GGNNCC 3 cut(s) 972, 1196, 1197
NmuCI GTSAC 2 cut(s) 517, 635
PciSI GCTCTTC 1 cut(s) 4
PctI GAATGC 1 cut(s) 1546
PdmI GAANNNNTTC 1 cut(s) 724
PfeI GAWTC 4 cut(s) 65, 235, 459, 761
PkrI GCNGC 4 cut(s) 325, 814, 817, 931
PpuMI RGGWCCY 1 cut(s) 1195
PsiI TTATAA 3 cut(s) 92, 345, 624
Psp5II RGGWCCY 1 cut(s) 1195
Psp6I CCWGG 1 cut(s) 715
PspEI GGTNACC 1 cut(s) 635
PspGI CCWGG 1 cut(s) 715
PspN4I GGNNCC 3 cut(s) 972, 1196, 1197
PspPI GGNCC 5 cut(s) 168, 408, 675, 1195, 1205
PspPPI RGGWCCY 1 cut(s) 1195
PstI CTGCAG 1 cut(s) 820
PsuI RGATCY 1 cut(s) 535
PvuII CAGCTG 1 cut(s) 815
RsaI GTAC 5 cut(s) 751, 769, 830, 885, 1500
RsaNI GTAC 5 cut(s) 750, 768, 829, 884, 1499
RseI CAYNNNNRTG 1 cut(s) 924
SapI GCTCTTC 1 cut(s) 4
SaqAI TTAA 4 cut(s) 575, 687, 1058, 1410
SatI GCNGC 4 cut(s) 324, 813, 816, 930
Sau3AI GATC 7 cut(s) 28, 294, 328, 535, 938, 1333, 1512
Sau96I GGNCC 5 cut(s) 168, 408, 675, 1195, 1205
ScrFI CCNGG 2 cut(s) 717, 1212
SfaNI GCATC 2 cut(s) 373, 1150
SfcI CTRYAG 1 cut(s) 816
SinI GGWCC 5 cut(s) 168, 408, 675, 1195, 1205
SmiMI CAYNNNNRTG 1 cut(s) 924
SmlI CTYRAG 2 cut(s) 574, 1349
SmoI CTYRAG 2 cut(s) 574, 1349
SsiI CCGC 1 cut(s) 1208
SspMI CTAG 4 cut(s) 138, 180, 878, 1466
StyD4I CCNGG 2 cut(s) 715, 1210
StyI CCWWGG 1 cut(s) 671
TaaI ACNGT 5 cut(s) 341, 749, 1498, 1503, 1557
TaqI TCGA 2 cut(s) 601, 1401
TaqII GACCGA 1 cut(s) 654
TatI WGTACW 2 cut(s) 749, 828
TfiI GAWTC 4 cut(s) 65, 235, 459, 761
Tru1I TTAA 4 cut(s) 575, 687, 1058, 1410
Tru9I TTAA 4 cut(s) 575, 687, 1058, 1410
TscAI CASTG 1 cut(s) 316
TseFI GTSAC 2 cut(s) 517, 635
TseI GCWGC 4 cut(s) 323, 812, 815, 929
Tsp45I GTSAC 2 cut(s) 517, 635
TspDTI ATGAA 8 cut(s) 71, 178, 195, 237, 380, 1019, 1069, 1443
TspRI CASTG 1 cut(s) 316
Vha464I CTTAAG 1 cut(s) 574
VpaK11BI GGWCC 5 cut(s) 168, 408, 675, 1195, 1205
XapI RAATTY 3 cut(s) 615, 849, 1576
XmnI GAANNNNTTC 1 cut(s) 724
XspI CTAG 4 cut(s) 138, 180, 878, 1466
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.