MD12G1211400.v1.1

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr12
OG0000117
Physical Location & Seq
Reverse (-)
29012047 .. 29015283
3237 bp
Loading structure...
UTR
Exon/CDS
Intron
MD12G1211400.v1.1.491

Sequence Viewer

Length: 1389 bp
ATGGCAATGAAATATTCACGATCTTTGCTCTTTGGTGTGCTGCTACTCATTGGCTTTGCATTGACAAATGGCAAAGCAACTAATACAGATCCACCTGTTCATTGCGAATTTCTCAATCGCAGCAGTTTTGAACCAGGGTTCATATTTGGCACAGGTTCTGCATCTTACCAGTATGAAGGTGCAGTAAAAGAAGATGGAAGAGGACCAAGCATATGGGATACCTTCACCCACAAACATCCAGAAAAAATCGATGATGGCAGTAACGGAGATGTCGCTATAGATCAATATCACCGCTATAAGGAAGATGTGGGGATTATGAAGGATATGAATTTGGATGCTTACAGATTATCTATTTCATGGTCCAGATTATTACCAAATGGAACGTTAAGTGGTGGCGTTAACAGGAAAGGAATTGATTATTACAACAATCTCATCAATGAACTCCTACGCAATGGTTTAAAGCCGTTTGTAACACTCTTTCATTGGGATGTTCCCCAAGCTTTAGAAGATGAATATGGTGGTTTCTTAAGCCCTCGTATTGTCGATCATTTTAAAGACTATGCAGAACTTTGTTATAAGGAATTTGGTGATCGTGTCAAGCACTGGTTCACGGTAAATGAGCCATATACTTTTAGTAGCATGGGTTATGCTGTTGGGACTCTAGCACCGGGACGCTGCTCTTCTTGGCAAAACCTAAACTGCACCGGTGGAGATTCAGCCATTGAACCATACTTGGTGACACACCACATTCTTCTTGCTCATGGAGCAGCTGTAGAATTGTACAAGAATAGATATCAGGCATCTCAGAAAGGCTTGATAGGGATAACATTGGTGTCATACTGGTTTGAGCCTGCTTCGGAGTCAAAGCAAGATAAAGATGCTGCCTTACGATCTTTGGATTTTATGTTTGGATGGCAAGTGTTTTTGGACCCTTTAACAAGTGGTGACTATCCACACAGCATGCGATCAATTGTTGGAAAAAGATTGCCAAAATTCACAAAAGAACAATCCAAGTTGCTAAACGGATCATCATTTGATTTTCTTGGAATAAATTATTATACTGCTAGATACGCAACTAGTACACCTAAGAACAATTCACTACAGGCAAGCTTCGTAACAGATCCTCAAGCTGATCTTACAACTGAGCTTAATGGAGTAGTACTTATTGGTCCACAGACTGCTTTAGATTGGTTATATGTATATCCAAAAGGAATTCACGATCTTGTGCTCTACACAAAGGAAAAATATAATGATCCACTCATTTATATTACTGAGAATGGTATAAATGGTGCGAAAGTGAAGGGATACTTTCCATGGACATTGTTGGACGACTTTGAATGGAATTCTGGATACACCGTCCGATTTGGTTTAAAACTACGTGGATTATAA

Protein Analysis

463

Amino Acids

52.14

Weight (kDa)

6.07

Isoelectric Point (pI)

25.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 41 - 428 8.9e-122 Glycosyl hydrolase family 1
Glyco_hydro_1 PF00232 429 - 457 2.3e-06 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 576, 1387
AciI CCGC 1 cut(s) 292
AclI AACGTT 1 cut(s) 383
AclWI GGATC 4 cut(s) 83, 1033, 1115, 1247
AcsI RAATTY 6 cut(s) 107, 328, 581, 992, 1212, 1342
AfaI GTAC 3 cut(s) 782, 1081, 1161
AfiI CCNNNNNNNGG 1 cut(s) 298
AflII CTTAAG 1 cut(s) 526
AgeI ACCGGT 1 cut(s) 704
AgsI TTSAA 3 cut(s) 131, 725, 1337
AhlI ACTAGT 1 cut(s) 1076
AjnI CCWGG 1 cut(s) 133
AluBI AGCT 5 cut(s) 500, 770, 1110, 1130, 1147
AluI AGCT 5 cut(s) 500, 770, 1110, 1130, 1147
Alw21I GWGCWC 1 cut(s) 1230
AlwI GGATC 4 cut(s) 83, 1033, 1115, 1247
AlwNI CAGNNNCTG 1 cut(s) 158
ApeKI GCWGC 5 cut(s) 40, 120, 675, 767, 881
ApoI RAATTY 6 cut(s) 107, 328, 581, 992, 1212, 1342
AsiGI ACCGGT 1 cut(s) 704
AspS9I GGNCC 4 cut(s) 203, 360, 928, 1169
AsuC2I CCSGG 1 cut(s) 669
AsuHPI GGTGA 5 cut(s) 217, 281, 599, 748, 956
AvaII GGWCC 4 cut(s) 203, 360, 928, 1169
Bbv12I GWGCWC 1 cut(s) 1230
BbvI GCAGC 5 cut(s) 27, 132, 662, 779, 868
BccI CCATC 3 cut(s) 188, 248, 906
BceAI ACGGC 1 cut(s) 448
BciT130I CCWGG 1 cut(s) 135
BciVI GTATCC 3 cut(s) 211, 1298, 1343
BcnI CCSGG 1 cut(s) 669
BcuI ACTAGT 1 cut(s) 1076
BfaI CTAG 3 cut(s) 662, 1065, 1077
BfmI CTRYAG 3 cut(s) 276, 771, 1100
BfrI CTTAAG 1 cut(s) 526
BfuI GTATCC 3 cut(s) 211, 1298, 1343
BisI GCNGC 5 cut(s) 41, 121, 676, 768, 882
BlsI GCNGC 5 cut(s) 42, 122, 677, 769, 883
BmcAI AGTACT 1 cut(s) 1161
Bme1390I CCNGG 2 cut(s) 135, 669
Bme18I GGWCC 4 cut(s) 203, 360, 928, 1169
BmgT120I GGNCC 4 cut(s) 203, 360, 928, 1169
BmiI GGNNCC 1 cut(s) 930
BmrFI CCNGG 2 cut(s) 135, 669
BmsI GCATC 4 cut(s) 170, 325, 809, 868
BpuEI CTTGAG 1 cut(s) 1110
BpuMI CCSGG 1 cut(s) 669
Bsa29I ATCGAT 1 cut(s) 249
BsaAI YACGTR 1 cut(s) 1379
BsaBI GATNNNNATC 1 cut(s) 285
BsaJI CCNNGG 2 cut(s) 134, 1313
BsaWI WCCGGW 1 cut(s) 704
BsaXI ACNNNNNCTCC 2 cut(s) 756, 786
Bsc4I CCNNNNNNNGG 1 cut(s) 298
Bse118I RCCGGY 1 cut(s) 704
Bse1I ACTGG 3 cut(s) 169, 608, 845
Bse3DI GCAATG 3 cut(s) 12, 100, 457
Bse8I GATNNNNATC 1 cut(s) 285
BseBI CCWGG 1 cut(s) 135
BseCI ATCGAT 1 cut(s) 249
BseDI CCNNGG 2 cut(s) 134, 1313
BseGI GGATG 4 cut(s) 235, 340, 493, 917
BseJI GATNNNNATC 1 cut(s) 285
BseLI CCNNNNNNNGG 1 cut(s) 298
BseMI GCAATG 3 cut(s) 12, 100, 457
BseMII CTCAG 3 cut(s) 818, 1134, 1263
BseNI ACTGG 3 cut(s) 169, 608, 845
BseXI GCAGC 5 cut(s) 27, 132, 662, 779, 868
BsgI GTGCAG 2 cut(s) 201, 685
BshTI ACCGGT 1 cut(s) 704
BshVI ATCGAT 1 cut(s) 249
BsiHKAI GWGCWC 1 cut(s) 1230
BsiSI CCGG 2 cut(s) 668, 705
BslFI GGGAC 2 cut(s) 670, 684
BslI CCNNNNNNNGG 1 cut(s) 298
BsmFI GGGAC 2 cut(s) 670, 684
Bsp1286I GDGCHC 1 cut(s) 1230
Bsp1407I TGTACA 1 cut(s) 780
Bsp19I CCATGG 1 cut(s) 1313
BspACI CCGC 1 cut(s) 292
BspCNI CTCAG 3 cut(s) 817, 1135, 1264
BspDI ATCGAT 1 cut(s) 249
BspLI GGNNCC 1 cut(s) 930
BspPI GGATC 4 cut(s) 83, 1033, 1115, 1247
BspQI GCTCTTC 1 cut(s) 685
BspTI CTTAAG 1 cut(s) 526
BsrDI GCAATG 3 cut(s) 12, 100, 457
BsrFI RCCGGY 1 cut(s) 704
BsrGI TGTACA 1 cut(s) 780
BsrI ACTGG 3 cut(s) 169, 608, 845
BssAI RCCGGY 1 cut(s) 704
BssECI CCNNGG 2 cut(s) 134, 1313
BssT1I CCWWGG 1 cut(s) 1313
Bst2UI CCWGG 1 cut(s) 135
Bst4CI ACNGT 2 cut(s) 613, 1357
Bst6I CTCTTC 2 cut(s) 193, 685
BstAFI CTTAAG 1 cut(s) 526
BstAUI TGTACA 1 cut(s) 780
BstBAI YACGTR 1 cut(s) 1379
BstC8I GCNNGC 3 cut(s) 852, 962, 1108
BstDEI CTNAG 4 cut(s) 804, 1086, 1143, 1272
BstDSI CCRYGG 1 cut(s) 1313
BstF5I GGATG 4 cut(s) 235, 340, 493, 917
BstMWI GCNNNNNNNGC 2 cut(s) 764, 1070
BstNI CCWGG 1 cut(s) 135
BstNSI RCATGY 1 cut(s) 964
BstSCI CCNGG 2 cut(s) 133, 667
BstSFI CTRYAG 3 cut(s) 276, 771, 1100
BstV1I GCAGC 5 cut(s) 27, 132, 662, 779, 868
BstX2I RGATCY 2 cut(s) 88, 1120
BstXI CCANNNNNNTGG 1 cut(s) 213
BstYI RGATCY 2 cut(s) 88, 1120
Bsu15I ATCGAT 1 cut(s) 249
BsuI GTATCC 3 cut(s) 211, 1298, 1343
BsuTUI ATCGAT 1 cut(s) 249
BtgI CCRYGG 1 cut(s) 1313
BtsCI GGATG 4 cut(s) 235, 340, 493, 917
BtsIMutI CAGTG 1 cut(s) 601
Cac8I GCNNGC 3 cut(s) 852, 962, 1108
CaiI CAGNNNCTG 1 cut(s) 158
Cfr10I RCCGGY 1 cut(s) 704
Cfr13I GGNCC 4 cut(s) 203, 360, 928, 1169
ClaI ATCGAT 1 cut(s) 249
CseI GACGC 1 cut(s) 681
Csp6I GTAC 3 cut(s) 781, 1080, 1160
CspAI ACCGGT 1 cut(s) 704
CviAII CATG 5 cut(s) 357, 640, 761, 961, 1314
CviQI GTAC 3 cut(s) 781, 1080, 1160
DdeI CTNAG 4 cut(s) 804, 1086, 1143, 1272
DraI TTTAAA 3 cut(s) 459, 553, 1371
Eam1104I CTCTTC 2 cut(s) 193, 685
EarI CTCTTC 2 cut(s) 193, 685
Eco130I CCWWGG 1 cut(s) 1313
Eco32I GATATC 1 cut(s) 794
Eco47I GGWCC 4 cut(s) 203, 360, 928, 1169
EcoRI GAATTC 2 cut(s) 1212, 1342
EcoRII CCWGG 1 cut(s) 133
EcoRV GATATC 1 cut(s) 794
EcoT14I CCWWGG 1 cut(s) 1313
ErhI CCWWGG 1 cut(s) 1313
FaeI CATG 5 cut(s) 360, 643, 764, 964, 1317
FalI AAGNNNNNCTT 4 cut(s) 1119, 1151, 1292, 1324
FaqI GGGAC 2 cut(s) 670, 684
FatI CATG 5 cut(s) 356, 639, 760, 960, 1313
FauNDI CATATG 1 cut(s) 212
Fnu4HI GCNGC 5 cut(s) 41, 121, 676, 768, 882
FokI GGATG 4 cut(s) 222, 347, 500, 924
Fsp4HI GCNGC 5 cut(s) 41, 121, 676, 768, 882
FspBI CTAG 3 cut(s) 662, 1065, 1077
GluI GCNGC 5 cut(s) 41, 121, 676, 768, 882
HapII CCGG 2 cut(s) 668, 705
HgaI GACGC 1 cut(s) 681
Hin1II CATG 5 cut(s) 360, 643, 764, 964, 1317
HincII GTYRAC 1 cut(s) 400
HindII GTYRAC 1 cut(s) 400
HindIII AAGCTT 2 cut(s) 498, 1108
HinfI GANTC 3 cut(s) 658, 713, 860
HpaI GTTAAC 1 cut(s) 400
HpaII CCGG 2 cut(s) 668, 705
HphI GGTGA 5 cut(s) 217, 281, 599, 748, 956
Hpy166II GTNNAC 4 cut(s) 400, 609, 1082, 1172
Hpy188I TCNGA 3 cut(s) 807, 859, 1361
Hpy188III TCNNGA 5 cut(s) 18, 239, 363, 1217, 1347
Hpy8I GTNNAC 4 cut(s) 400, 609, 1082, 1172
HpyAV CCTTC 4 cut(s) 170, 232, 313, 1294
HpyCH4III ACNGT 2 cut(s) 613, 1357
HpyCH4IV ACGT 2 cut(s) 383, 1378
HpyCH4V TGCA 5 cut(s) 59, 161, 182, 563, 702
HpyF10VI GCNNNNNNNGC 2 cut(s) 764, 1070
HpyF3I CTNAG 4 cut(s) 804, 1086, 1143, 1272
HpySE526I ACGT 2 cut(s) 383, 1378
Hsp92II CATG 5 cut(s) 360, 643, 764, 964, 1317
KspAI GTTAAC 1 cut(s) 400
LguI GCTCTTC 1 cut(s) 685
LmnI GCTCC 1 cut(s) 764
Lsp1109I GCAGC 5 cut(s) 27, 132, 662, 779, 868
LweI GCATC 4 cut(s) 170, 325, 809, 868
MaeI CTAG 3 cut(s) 662, 1065, 1077
MaeII ACGT 2 cut(s) 383, 1378
MaeIII GTNAC 5 cut(s) 260, 469, 736, 944, 1114
MboII GAAGA 6 cut(s) 203, 210, 314, 518, 672, 743
MfeI CAATTG 1 cut(s) 969
MflI RGATCY 2 cut(s) 88, 1120
MhlI GDGCHC 1 cut(s) 1230
MlyI GAGTC 2 cut(s) 652, 869
MmeI TCCRAC 2 cut(s) 955, 1305
MnlI CCTC 3 cut(s) 194, 543, 1134
MseI TTAA 8 cut(s) 386, 399, 458, 527, 552, 935, 1149, 1370
MslI CAYNNNNRTG 1 cut(s) 486
MspA1I CMGCKG 1 cut(s) 770
MspCI CTTAAG 1 cut(s) 526
MspI CCGG 2 cut(s) 668, 705
MspR9I CCNGG 2 cut(s) 135, 669
MunI CAATTG 1 cut(s) 969
MvaI CCWGG 1 cut(s) 135
MwoI GCNNNNNNNGC 2 cut(s) 764, 1070
NciI CCSGG 1 cut(s) 669
NcoI CCATGG 1 cut(s) 1313
NdeI CATATG 1 cut(s) 212
NlaIII CATG 5 cut(s) 360, 643, 764, 964, 1317
NlaIV GGNNCC 1 cut(s) 930
NmuCI GTSAC 2 cut(s) 736, 944
NspI RCATGY 1 cut(s) 964
PaeI GCATGC 1 cut(s) 964
PciSI GCTCTTC 1 cut(s) 685
PfeI GAWTC 1 cut(s) 713
PinAI ACCGGT 1 cut(s) 704
PkrI GCNGC 5 cut(s) 42, 122, 677, 769, 883
PleI GAGTC 2 cut(s) 652, 868
PpsI GAGTC 2 cut(s) 652, 868
Ppu21I YACGTR 1 cut(s) 1379
PsiI TTATAA 2 cut(s) 576, 1387
Psp1406I AACGTT 1 cut(s) 383
Psp6I CCWGG 1 cut(s) 133
PspGI CCWGG 1 cut(s) 133
PspN4I GGNNCC 1 cut(s) 930
PspPI GGNCC 4 cut(s) 203, 360, 928, 1169
PstNI CAGNNNCTG 1 cut(s) 158
PsuI RGATCY 2 cut(s) 88, 1120
PvuII CAGCTG 1 cut(s) 770
RsaI GTAC 3 cut(s) 782, 1081, 1161
RsaNI GTAC 3 cut(s) 781, 1080, 1160
RseI CAYNNNNRTG 1 cut(s) 486
SapI GCTCTTC 1 cut(s) 685
SaqAI TTAA 8 cut(s) 386, 399, 458, 527, 552, 935, 1149, 1370
SatI GCNGC 5 cut(s) 41, 121, 676, 768, 882
Sau96I GGNCC 4 cut(s) 203, 360, 928, 1169
ScaI AGTACT 1 cut(s) 1161
SchI GAGTC 2 cut(s) 652, 869
ScrFI CCNGG 2 cut(s) 135, 669
SduI GDGCHC 1 cut(s) 1230
SfaNI GCATC 4 cut(s) 170, 325, 809, 868
SfcI CTRYAG 3 cut(s) 276, 771, 1100
SgrAI CRCCGGYG 1 cut(s) 704
SinI GGWCC 4 cut(s) 203, 360, 928, 1169
SmiMI CAYNNNNRTG 1 cut(s) 486
SmlI CTYRAG 2 cut(s) 526, 1125
SmoI CTYRAG 2 cut(s) 526, 1125
SpeI ACTAGT 1 cut(s) 1076
SphI GCATGC 1 cut(s) 964
SsiI CCGC 1 cut(s) 292
SspI AATATT 1 cut(s) 14
SspMI CTAG 3 cut(s) 662, 1065, 1077
StyD4I CCNGG 2 cut(s) 133, 667
StyI CCWWGG 1 cut(s) 1313
TaaI ACNGT 2 cut(s) 613, 1357
TaiI ACGT 2 cut(s) 386, 1381
TaqI TCGA 2 cut(s) 249, 543
TatI WGTACW 3 cut(s) 780, 1079, 1159
TfiI GAWTC 1 cut(s) 713
Tru1I TTAA 8 cut(s) 386, 399, 458, 527, 552, 935, 1149, 1370
Tru9I TTAA 8 cut(s) 386, 399, 458, 527, 552, 935, 1149, 1370
TscAI CASTG 1 cut(s) 608
TseFI GTSAC 2 cut(s) 736, 944
TseI GCWGC 5 cut(s) 40, 120, 675, 767, 881
Tsp45I GTSAC 2 cut(s) 736, 944
TspGWI ACGGA 2 cut(s) 279, 1038
TspRI CASTG 1 cut(s) 608
Vha464I CTTAAG 1 cut(s) 526
VpaK11BI GGWCC 4 cut(s) 203, 360, 928, 1169
XapI RAATTY 6 cut(s) 107, 328, 581, 992, 1212, 1342
XceI RCATGY 1 cut(s) 964
XspI CTAG 3 cut(s) 662, 1065, 1077
ZrmI AGTACT 1 cut(s) 1161
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.