MD11G1024100.v1.1

Belongs to the glycosyl hydrolase 1 family

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr11
Physical Location & Seq
Reverse (-)
2084681 .. 2089195
4515 bp
Loading structure...
UTR
Exon/CDS
Intron
MD11G1024100.v1.1.491

Sequence Viewer

Length: 1629 bp
ATGGCAATGAAATATCGTTCTTTGCTTTTGTGTGTGGTGCTACTCATTGGTTTTGCATTGACAAAAAGCAAAGCTGCAGAGACTGATCATCGACCAGTTAAATGTGGTTTGCTCCACAGGGGAAGCTTTGATTCTCTTGAACCAGGGTTCTTATTTGGCGCAGCTTCTGCATCTTACCAGGTAGAAGGTGCTTGGAATCAACATGGCAGAGGACCAAGCATATGGGATAACTACACCCACCAATATCCACAAAGAATCGTTAATCGAAGCAATGGAGACATCGCTATTGATCAGTATCACCGTTACAAGGAAGATGTGGATATCATGAAGAATATGGGGATGGATTCTTATAGGTTCTCTATCTCATGGTCGAGATTGTTACCAAATGGAAAGCTATGCGGCGGAGTTAACATGGAAGGAATCGAATACTACAACAATCTAATCGATGAACTCCTATTCAATGGTCTAACACCATTTGTGACACTTTTTCACTGGGATGTTCCCCAAGCTTTAGTGGACGAGTATGGTGGTTTCTTAAGTCCTCGTATTGTGGATCACTTTAAAGACTATGCAGAGATTTGTTTTATGCATTTTGGTGATCGAGTAAAGCATTGGCTCACTTTGAATGAGCCATTTACCGTAAGTAATCATGGTTATGCAATCGGGACACATGCACCAGGACGATGCTCTGCTTGGCAAAAATTAAACTGCACTGGTGGAAATTCCGCTGTTGAACCATATTTGGTGACACATCACCAACTCCTTGCTCATGCATCCACTGTAAAGTTGTACAAGACTAAATATCAGGCATGTCAAAATGGTGCAATAGGATTAGCAGTGGTGACACACTGGTTTGAGCCAGCTTCGAAGGCAAAGCATGATATAGATGCCGCAAATCGAGCTTTGGATTTTATGTTTGGATGGTTTATGGACCCGATCACAACTGGTGACTATCCAAAGAGCATGCGAACATATGTTGGTGCACGATTACCTAATTTCACGAAAGAGCAATCCGATTCTCTAAACGGGTCATATGATTTTATAGGAATCAATTACTACTCTGCTAGATATGCAAGCAATCCACAAAAGAATTCATCTGACCCTGAAAGCTACTTAAATGATCCTCATGTTAATGAGACAACTGCGCTTAATGGAAAACCCATTGGTCCACGGGCCGCTTCAGATTGGTTATACATTTATCCAAAAGGAATTCACGATCTTATGCTTTATACCAAGAGAAAGTATAATGACCCAGCCATTTATATTACTGAAAATGGCGTCGATGAGTTTACTAATAGCAGCTTATCACTTGAGCAAGCACTTAATGATACCATAAGAGTCAACTACTATCGTGACCACCTTTGTCATCTTCAAGCAGCAATTCAATCGGGTGCTAAAGTAAAGGGATACTTTGCATGGTCAATTCTGGATAATTTTGAATGGGCAGAGGGATATCGCAGTCGGTTTGGTCTCAACTATGTGGACTATGAAGGTGGACTGACAAGGTACCCAAAACGCTCGGCGAACTGGTTCAAAACTTTCTTGAAGAAGAGCCAAAGAAATACGAAAAAGATAAAAATTTCTGTGGATGATAAAGCTGAGGACATCATGCTTGTCTATCAAGTTTGA

Protein Analysis

543

Amino Acids

61.75

Weight (kDa)

7.64

Isoelectric Point (pI)

22.7

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 46 - 517 6.5e-162 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1506
AccB1I GGYRCC 1 cut(s) 1506
AciI CCGC 5 cut(s) 399, 402, 726, 891, 1176
AclWI GGATC 2 cut(s) 561, 1115
AcsI RAATTY 4 cut(s) 721, 1090, 1209, 1578
AcuI CTGAAG 1 cut(s) 1164
AcyI GRCGYC 1 cut(s) 1278
AfaI GTAC 2 cut(s) 791, 1508
AfiI CCNNNNNNNGG 1 cut(s) 307
AflII CTTAAG 1 cut(s) 535
AgsI TTSAA 9 cut(s) 140, 460, 625, 734, 1373, 1385, 1439, 1534, 1546
AjnI CCWGG 3 cut(s) 142, 177, 676
Alw21I GWGCWC 1 cut(s) 985
Alw26I GTCTC 4 cut(s) 74, 270, 1130, 1475
Alw44I GTGCAC 1 cut(s) 981
AlwI GGATC 2 cut(s) 561, 1115
AlwNI CAGNNNCTG 2 cut(s) 83, 167
AoxI GGCC 1 cut(s) 1173
ApaLI GTGCAC 1 cut(s) 981
ApeKI GCWGC 4 cut(s) 74, 161, 1299, 1376
ApoI RAATTY 4 cut(s) 721, 1090, 1209, 1578
Asp700I GAANNNNTTC 1 cut(s) 1529
Asp718I GGTACC 1 cut(s) 1506
AspLEI GCGC 2 cut(s) 161, 1147
AspS9I GGNCC 4 cut(s) 212, 931, 1166, 1173
AsuHPI GGTGA 6 cut(s) 290, 608, 746, 757, 853, 959
AsuII TTCGAA 1 cut(s) 866
AvaII GGWCC 3 cut(s) 212, 931, 1166
BaeGI GKGCMC 1 cut(s) 985
BanI GGYRCC 1 cut(s) 1506
Bbv12I GWGCWC 1 cut(s) 985
BbvCI CCTCAGC 1 cut(s) 1599
BbvI GCAGC 4 cut(s) 61, 173, 1311, 1388
BccI CCATC 2 cut(s) 334, 915
BcgI CGANNNNNNTGC 2 cut(s) 1368, 1402
BciT130I CCWGG 3 cut(s) 144, 179, 678
BciVI GTATCC 1 cut(s) 1400
BclI TGATCA 2 cut(s) 85, 289
BcoDI GTCTC 4 cut(s) 74, 270, 1130, 1475
BfaI CTAG 1 cut(s) 1065
BfmI CTRYAG 1 cut(s) 75
BfrI CTTAAG 1 cut(s) 535
BfuI GTATCC 1 cut(s) 1400
BisI GCNGC 7 cut(s) 75, 162, 400, 891, 1176, 1300, 1377
BlsI GCNGC 7 cut(s) 76, 163, 401, 892, 1177, 1301, 1378
Bme1390I CCNGG 3 cut(s) 144, 179, 678
Bme18I GGWCC 3 cut(s) 212, 931, 1166
BmgT120I GGNCC 4 cut(s) 212, 931, 1166, 1173
BmiI GGNNCC 2 cut(s) 933, 1508
BmrFI CCNGG 3 cut(s) 144, 179, 678
BmrI ACTGGG 1 cut(s) 502
BmsI GCATC 4 cut(s) 179, 674, 782, 877
BmuI ACTGGG 1 cut(s) 502
Bpu10I CCTNAGC 1 cut(s) 1599
Bpu14I TTCGAA 1 cut(s) 866
BpuEI CTTGAG 1 cut(s) 1331
Bsa29I ATCGAT 1 cut(s) 444
BsaBI GATNNNNATC 1 cut(s) 294
BsaHI GRCGYC 1 cut(s) 1278
BsaI GGTCTC 1 cut(s) 1475
BsaJI CCNNGG 2 cut(s) 143, 1169
Bsc4I CCNNNNNNNGG 1 cut(s) 307
Bse1I ACTGG 6 cut(s) 95, 497, 718, 854, 949, 1532
Bse3DI GCAATG 2 cut(s) 12, 277
Bse8I GATNNNNATC 1 cut(s) 294
BseBI CCWGG 3 cut(s) 144, 179, 678
BseCI ATCGAT 1 cut(s) 444
BseDI CCNNGG 2 cut(s) 143, 1169
BseGI GGATG 5 cut(s) 345, 502, 773, 926, 1594
BseJI GATNNNNATC 1 cut(s) 294
BseLI CCNNNNNNNGG 1 cut(s) 307
BseMI GCAATG 2 cut(s) 12, 277
BseMII CTCAG 1 cut(s) 1590
BseNI ACTGG 6 cut(s) 95, 497, 718, 854, 949, 1532
BseSI GKGCMC 1 cut(s) 985
BseXI GCAGC 4 cut(s) 61, 173, 1311, 1388
BseYI CCCAGC 1 cut(s) 1252
BsgI GTGCAG 1 cut(s) 694
BshFI GGCC 1 cut(s) 1175
BshNI GGYRCC 1 cut(s) 1506
BshVI ATCGAT 1 cut(s) 444
BsiHKAI GWGCWC 1 cut(s) 985
BslFI GGGAC 1 cut(s) 679
BslI CCNNNNNNNGG 1 cut(s) 307
BsmAI GTCTC 4 cut(s) 74, 270, 1130, 1475
BsmFI GGGAC 1 cut(s) 679
BsnI GGCC 1 cut(s) 1175
Bso31I GGTCTC 1 cut(s) 1475
Bsp119I TTCGAA 1 cut(s) 866
Bsp1286I GDGCHC 1 cut(s) 985
Bsp1407I TGTACA 1 cut(s) 789
Bsp143I GATC 7 cut(s) 85, 289, 553, 598, 936, 1120, 1216
BspACI CCGC 5 cut(s) 399, 402, 726, 891, 1176
BspANI GGCC 1 cut(s) 1175
BspCNI CTCAG 1 cut(s) 1591
BspDI ATCGAT 1 cut(s) 444
BspHI TCATGA 1 cut(s) 324
BspLI GGNNCC 2 cut(s) 933, 1508
BspMAI CTGCAG 1 cut(s) 79
BspPI GGATC 2 cut(s) 561, 1115
BspQI GCTCTTC 1 cut(s) 1544
BspT104I TTCGAA 1 cut(s) 866
BspT107I GGYRCC 1 cut(s) 1506
BspTI CTTAAG 1 cut(s) 535
BspTNI GGTCTC 1 cut(s) 1475
BsrDI GCAATG 2 cut(s) 12, 277
BsrGI TGTACA 1 cut(s) 789
BsrI ACTGG 6 cut(s) 95, 497, 718, 854, 949, 1532
BssECI CCNNGG 2 cut(s) 143, 1169
BssMI GATC 7 cut(s) 85, 289, 553, 598, 936, 1120, 1216
BssNI GRCGYC 1 cut(s) 1278
Bst2UI CCWGG 3 cut(s) 144, 179, 678
Bst4CI ACNGT 3 cut(s) 302, 640, 781
Bst6I CTCTTC 1 cut(s) 1544
BstACI GRCGYC 1 cut(s) 1278
BstAFI CTTAAG 1 cut(s) 535
BstAPI GCANNNNNTGC 1 cut(s) 167
BstAUI TGTACA 1 cut(s) 789
BstBI TTCGAA 1 cut(s) 866
BstC8I GCNNGC 4 cut(s) 861, 965, 1075, 1317
BstDEI CTNAG 1 cut(s) 1599
BstDSI CCRYGG 1 cut(s) 1169
BstF5I GGATG 5 cut(s) 345, 502, 773, 926, 1594
BstHHI GCGC 2 cut(s) 161, 1147
BstKTI GATC 7 cut(s) 88, 292, 556, 601, 939, 1123, 1219
BstMAI GTCTC 4 cut(s) 74, 270, 1130, 1475
BstMBI GATC 7 cut(s) 85, 289, 553, 598, 936, 1120, 1216
BstMWI GCNNNNNNNGC 4 cut(s) 167, 869, 899, 1070
BstNI CCWGG 3 cut(s) 144, 179, 678
BstNSI RCATGY 3 cut(s) 674, 813, 967
BstSCI CCNGG 3 cut(s) 142, 177, 676
BstSFI CTRYAG 1 cut(s) 75
BstSLI GKGCMC 1 cut(s) 985
BstV1I GCAGC 4 cut(s) 61, 173, 1311, 1388
BstXI CCANNNNNNTGG 1 cut(s) 222
Bsu15I ATCGAT 1 cut(s) 444
BsuI GTATCC 1 cut(s) 1400
BsuRI GGCC 1 cut(s) 1175
BsuTUI ATCGAT 1 cut(s) 444
BtgI CCRYGG 1 cut(s) 1169
BtgZI GCGATG 1 cut(s) 265
BtsCI GGATG 5 cut(s) 345, 502, 773, 926, 1594
BtsI GCAGTG 1 cut(s) 843
BtsIMutI CAGTG 5 cut(s) 490, 711, 777, 843, 847
Cac8I GCNNGC 4 cut(s) 861, 965, 1075, 1317
CaiI CAGNNNCTG 2 cut(s) 83, 167
CciI TCATGA 1 cut(s) 324
CfoI GCGC 2 cut(s) 161, 1147
Cfr13I GGNCC 4 cut(s) 212, 931, 1166, 1173
ClaI ATCGAT 1 cut(s) 444
CseI GACGC 1 cut(s) 1267
CsiI ACCWGGT 1 cut(s) 177
Csp6I GTAC 2 cut(s) 790, 1507
CviQI GTAC 2 cut(s) 790, 1507
DdeI CTNAG 1 cut(s) 1599
DpnI GATC 7 cut(s) 87, 291, 555, 600, 938, 1122, 1218
DpnII GATC 7 cut(s) 85, 289, 553, 598, 936, 1120, 1216
DraI TTTAAA 1 cut(s) 562
Eam1104I CTCTTC 1 cut(s) 1544
EarI CTCTTC 1 cut(s) 1544
EciI GGCGGA 1 cut(s) 417
Eco31I GGTCTC 1 cut(s) 1475
Eco32I GATATC 2 cut(s) 322, 1454
Eco47I GGWCC 3 cut(s) 212, 931, 1166
Eco57I CTGAAG 1 cut(s) 1164
EcoRI GAATTC 2 cut(s) 1090, 1209
EcoRII CCWGG 3 cut(s) 142, 177, 676
EcoRV GATATC 2 cut(s) 322, 1454
EcoT22I ATGCAT 2 cut(s) 591, 775
FalI AAGNNNNNCTT 2 cut(s) 1394, 1426
FaqI GGGAC 1 cut(s) 679
FauNDI CATATG 3 cut(s) 221, 973, 1033
FbaI TGATCA 2 cut(s) 85, 289
Fnu4HI GCNGC 7 cut(s) 75, 162, 400, 891, 1176, 1300, 1377
FokI GGATG 5 cut(s) 352, 509, 760, 933, 1601
Fsp4HI GCNGC 7 cut(s) 75, 162, 400, 891, 1176, 1300, 1377
FspBI CTAG 1 cut(s) 1065
GlaI GCGC 2 cut(s) 160, 1146
GluI GCNGC 7 cut(s) 75, 162, 400, 891, 1176, 1300, 1377
GsaI CCCAGC 1 cut(s) 1256
HaeIII GGCC 1 cut(s) 1175
HgaI GACGC 1 cut(s) 1267
HhaI GCGC 2 cut(s) 161, 1147
Hin1I GRCGYC 1 cut(s) 1278
Hin6I GCGC 2 cut(s) 159, 1145
HinP1I GCGC 2 cut(s) 159, 1145
HincII GTYRAC 2 cut(s) 409, 1342
HindII GTYRAC 2 cut(s) 409, 1342
HindIII AAGCTT 2 cut(s) 124, 507
HinfI GANTC 8 cut(s) 131, 196, 255, 344, 420, 1016, 1047, 1338
HpaI GTTAAC 1 cut(s) 409
HphI GGTGA 6 cut(s) 290, 608, 746, 757, 853, 959
Hpy166II GTNNAC 8 cut(s) 409, 517, 983, 1169, 1290, 1342, 1483, 1496
Hpy188I TCNGA 3 cut(s) 1015, 1099, 1183
Hpy188III TCNNGA 9 cut(s) 137, 325, 372, 664, 1000, 1214, 1352, 1427, 1543
Hpy8I GTNNAC 8 cut(s) 409, 517, 983, 1169, 1290, 1342, 1483, 1496
Hpy99I CGWCG 1 cut(s) 1283
HpyAV CCTTC 4 cut(s) 179, 410, 862, 1484
HpyCH4III ACNGT 3 cut(s) 302, 640, 781
HpyF10VI GCNNNNNNNGC 4 cut(s) 167, 869, 899, 1070
HpyF3I CTNAG 1 cut(s) 1599
Hsp92I GRCGYC 1 cut(s) 1278
HspAI GCGC 2 cut(s) 159, 1145
KpnI GGTACC 1 cut(s) 1510
Ksp22I TGATCA 2 cut(s) 85, 289
KspAI GTTAAC 1 cut(s) 409
Kzo9I GATC 7 cut(s) 85, 289, 553, 598, 936, 1120, 1216
LguI GCTCTTC 1 cut(s) 1544
LmnI GCTCC 1 cut(s) 117
Lsp1109I GCAGC 4 cut(s) 61, 173, 1311, 1388
LweI GCATC 4 cut(s) 179, 674, 782, 877
MabI ACCWGGT 1 cut(s) 177
MaeI CTAG 1 cut(s) 1065
MaeIII GTNAC 7 cut(s) 302, 378, 478, 745, 841, 947, 1352
MalI GATC 7 cut(s) 87, 291, 555, 600, 938, 1122, 1218
MboI GATC 7 cut(s) 85, 289, 553, 598, 936, 1120, 1216
MboII GAAGA 5 cut(s) 323, 340, 1361, 1558, 1561
MhlI GDGCHC 1 cut(s) 985
MlyI GAGTC 1 cut(s) 1347
MnlI CCTC 5 cut(s) 203, 552, 1134, 1441, 1594
Mph1103I ATGCAT 2 cut(s) 591, 775
MroXI GAANNNNTTC 1 cut(s) 1529
MslI CAYNNNNRTG 4 cut(s) 495, 594, 654, 1131
MspA1I CMGCKG 1 cut(s) 728
MspCI CTTAAG 1 cut(s) 535
MspR9I CCNGG 3 cut(s) 144, 179, 678
MvaI CCWGG 3 cut(s) 144, 179, 678
MwoI GCNNNNNNNGC 4 cut(s) 167, 869, 899, 1070
NdeI CATATG 3 cut(s) 221, 973, 1033
NdeII GATC 7 cut(s) 85, 289, 553, 598, 936, 1120, 1216
NlaIV GGNNCC 2 cut(s) 933, 1508
NmeAIII GCCGAG 1 cut(s) 1499
NmuCI GTSAC 5 cut(s) 478, 745, 841, 947, 1352
NsiI ATGCAT 2 cut(s) 591, 775
NspI RCATGY 3 cut(s) 674, 813, 967
NspV TTCGAA 1 cut(s) 866
PaeI GCATGC 1 cut(s) 967
PagI TCATGA 1 cut(s) 324
PciSI GCTCTTC 1 cut(s) 1544
PdmI GAANNNNTTC 1 cut(s) 1529
PfeI GAWTC 7 cut(s) 131, 196, 255, 344, 420, 1016, 1047
PkrI GCNGC 7 cut(s) 76, 163, 401, 892, 1177, 1301, 1378
PleI GAGTC 1 cut(s) 1346
PpsI GAGTC 1 cut(s) 1346
Psp6I CCWGG 3 cut(s) 142, 177, 676
PspFI CCCAGC 1 cut(s) 1252
PspGI CCWGG 3 cut(s) 142, 177, 676
PspN4I GGNNCC 2 cut(s) 933, 1508
PspPI GGNCC 4 cut(s) 212, 931, 1166, 1173
PstI CTGCAG 1 cut(s) 79
PstNI CAGNNNCTG 2 cut(s) 83, 167
RsaI GTAC 2 cut(s) 791, 1508
RsaNI GTAC 2 cut(s) 790, 1507
RseI CAYNNNNRTG 4 cut(s) 495, 594, 654, 1131
SapI GCTCTTC 1 cut(s) 1544
SatI GCNGC 7 cut(s) 75, 162, 400, 891, 1176, 1300, 1377
Sau3AI GATC 7 cut(s) 85, 289, 553, 598, 936, 1120, 1216
Sau96I GGNCC 4 cut(s) 212, 931, 1166, 1173
SchI GAGTC 1 cut(s) 1347
ScrFI CCNGG 3 cut(s) 144, 179, 678
SduI GDGCHC 1 cut(s) 985
SexAI ACCWGGT 1 cut(s) 177
SfaNI GCATC 4 cut(s) 179, 674, 782, 877
SfcI CTRYAG 1 cut(s) 75
SfuI TTCGAA 1 cut(s) 866
SinI GGWCC 3 cut(s) 212, 931, 1166
SmiMI CAYNNNNRTG 4 cut(s) 495, 594, 654, 1131
SmlI CTYRAG 2 cut(s) 535, 1310
SmoI CTYRAG 2 cut(s) 535, 1310
SphI GCATGC 1 cut(s) 967
SsiI CCGC 5 cut(s) 399, 402, 726, 891, 1176
SspMI CTAG 1 cut(s) 1065
StyD4I CCNGG 3 cut(s) 142, 177, 676
TaaI ACNGT 3 cut(s) 302, 640, 781
TaqI TCGA 9 cut(s) 91, 265, 371, 423, 444, 601, 866, 898, 1281
TatI WGTACW 1 cut(s) 789
TauI GCSGC 3 cut(s) 402, 893, 1178
TfiI GAWTC 7 cut(s) 131, 196, 255, 344, 420, 1016, 1047
TscAI CASTG 5 cut(s) 497, 718, 784, 843, 854
TseFI GTSAC 5 cut(s) 478, 745, 841, 947, 1352
TseI GCWGC 4 cut(s) 74, 161, 1299, 1376
Tsp45I GTSAC 5 cut(s) 478, 745, 841, 947, 1352
TspDTI ATGAA 5 cut(s) 23, 341, 462, 1083, 1503
TspRI CASTG 5 cut(s) 497, 718, 784, 843, 854
Vha464I CTTAAG 1 cut(s) 535
VneI GTGCAC 1 cut(s) 981
VpaK11BI GGWCC 3 cut(s) 212, 931, 1166
XapI RAATTY 4 cut(s) 721, 1090, 1209, 1578
XceI RCATGY 3 cut(s) 674, 813, 967
XmnI GAANNNNTTC 1 cut(s) 1529
XspI CTAG 1 cut(s) 1065
Zsp2I ATGCAT 2 cut(s) 591, 775
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.