pycom09g16150

beta-glucosidase activity

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr9
Physical Location & Seq
Reverse (-)
16256914 .. 16258498
1585 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom09g16150.2

Sequence Viewer

Length: 765 bp
ATGCAAACTAATAAGATATATGGCCAACATTTTCGAGACTATGCAAAACTTTGTTACAATGAATTTGGCGACCGCGTAAAACATTGGATCACGTTAAATGAGCCATGGACCTATAGCTACGGTGGTTATGCTAGCGGGTCTTTTGCACCAGGACGATGTTCTGCTTGGCAGCAACTAAACTGCACCGGTGGAAATTCGGCTACTGAACCATACTTGGTGGCACACCACCAACTCCTTGCTCATGCAGCTGCTGTAAAAGTATACAAGGATAAATATCAGGCATCTCAGAAAGGCATGATATCAATAACATTGGTGTCACATTGGTTTGTTCCGGTTTCTGAGGCAAAGCACCATAAAAACGCTGCGTTAAGATCATTGGATTTTATGTTTGGATGGTTTATGGAACCATTGACGAGTGGCGACTATCCACACAGCATGCGGTCTCTTGTTGGAAGCCGATTACCAAAGTTTACGAAAGAACAATCCAAGTTGCTAAAGGGGTCATTTGATTTTCTTGGATTAAATTACTATACCGCTTACTATGCAAGTTATGCACCTTCAAACAATTCTGTAAATGCAAGCTATTTAACAGATGCTCGCTCTAATCAATCCCCTGAGAAAAATGGAGTCCCCATCGGTCCAAAGGCTGCTTCAGATTGGCTATATGTTTATCCAAGAGGAATTCGAGACCTTTTACTCTACACGAAGGAGAAGTATCATGATCCACTCATTTACATTACTGAGAATGGGATGGTGTCAATGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

255

Amino Acids

28.84

Weight (kDa)

9.11

Isoelectric Point (pI)

33.6

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 261
AccII CGCG 1 cut(s) 75
AciI CCGC 4 cut(s) 73, 135, 439, 534
AclWI GGATC 2 cut(s) 95, 716
AcoI YGGCCR 1 cut(s) 22
AcsI RAATTY 3 cut(s) 62, 193, 681
AcuI CTGAAG 1 cut(s) 636
AgeI ACCGGT 1 cut(s) 185
AgsI TTSAA 1 cut(s) 561
AjnI CCWGG 1 cut(s) 148
AjuI GAANNNNNNNTTGG 2 cut(s) 634, 666
AluBI AGCT 3 cut(s) 117, 248, 582
AluI AGCT 3 cut(s) 117, 248, 582
Alw26I GTCTC 3 cut(s) 30, 447, 681
AlwI GGATC 2 cut(s) 95, 716
AlwNI CAGNNNCTG 1 cut(s) 251
AoxI GGCC 1 cut(s) 22
ApeKI GCWGC 5 cut(s) 169, 245, 248, 362, 647
ApoI RAATTY 3 cut(s) 62, 193, 681
AsiGI ACCGGT 1 cut(s) 185
AspS9I GGNCC 2 cut(s) 108, 638
AsuNHI GCTAGC 1 cut(s) 131
AvaII GGWCC 2 cut(s) 108, 638
BalI TGGCCA 1 cut(s) 24
BbvI GCAGC 5 cut(s) 181, 235, 257, 349, 634
BccI CCATC 3 cut(s) 387, 641, 745
BciT130I CCWGG 1 cut(s) 150
BcoDI GTCTC 3 cut(s) 30, 447, 681
BfaI CTAG 1 cut(s) 132
BfmI CTRYAG 1 cut(s) 112
BisI GCNGC 5 cut(s) 170, 246, 249, 363, 648
BlsI GCNGC 5 cut(s) 171, 247, 250, 364, 649
Bme1390I CCNGG 1 cut(s) 150
Bme18I GGWCC 2 cut(s) 108, 638
BmgT120I GGNCC 2 cut(s) 108, 638
BmiI GGNNCC 1 cut(s) 405
BmrFI CCNGG 1 cut(s) 150
BmsI GCATC 2 cut(s) 290, 583
BmtI GCTAGC 1 cut(s) 135
BsaBI GATNNNNATC 1 cut(s) 273
BsaI GGTCTC 2 cut(s) 447, 681
BsaJI CCNNGG 1 cut(s) 104
BsaWI WCCGGW 2 cut(s) 185, 331
Bse118I RCCGGY 1 cut(s) 185
Bse8I GATNNNNATC 1 cut(s) 273
BseBI CCWGG 1 cut(s) 150
BseDI CCNNGG 1 cut(s) 104
BseGI GGATG 2 cut(s) 398, 756
BseJI GATNNNNATC 1 cut(s) 273
BseMII CTCAG 4 cut(s) 299, 330, 606, 732
BseXI GCAGC 5 cut(s) 181, 235, 257, 349, 634
BsgI GTGCAG 1 cut(s) 166
Bsh1236I CGCG 1 cut(s) 75
Bsh1285I CGRYCG 1 cut(s) 73
BshFI GGCC 1 cut(s) 24
BshTI ACCGGT 1 cut(s) 185
BsiEI CGRYCG 1 cut(s) 73
BsiSI CCGG 2 cut(s) 186, 332
BslFI GGGAC 1 cut(s) 614
BsmAI GTCTC 3 cut(s) 30, 447, 681
BsmFI GGGAC 1 cut(s) 614
BsnI GGCC 1 cut(s) 24
Bso31I GGTCTC 2 cut(s) 447, 681
Bsp143I GATC 3 cut(s) 87, 371, 721
Bsp19I CCATGG 1 cut(s) 104
BspACI CCGC 4 cut(s) 73, 135, 439, 534
BspANI GGCC 1 cut(s) 24
BspCNI CTCAG 4 cut(s) 298, 331, 607, 733
BspFNI CGCG 1 cut(s) 75
BspHI TCATGA 1 cut(s) 718
BspLI GGNNCC 1 cut(s) 405
BspOI GCTAGC 1 cut(s) 135
BspPI GGATC 2 cut(s) 95, 716
BspTNI GGTCTC 2 cut(s) 447, 681
BsrFI RCCGGY 1 cut(s) 185
BssAI RCCGGY 1 cut(s) 185
BssECI CCNNGG 1 cut(s) 104
BssMI GATC 3 cut(s) 87, 371, 721
BssNAI GTATAC 1 cut(s) 262
BssT1I CCWWGG 1 cut(s) 104
Bst1107I GTATAC 1 cut(s) 262
Bst2UI CCWGG 1 cut(s) 150
Bst4CI ACNGT 1 cut(s) 122
BstAPI GCANNNNNTGC 1 cut(s) 551
BstC8I GCNNGC 4 cut(s) 133, 437, 580, 598
BstDEI CTNAG 4 cut(s) 285, 339, 615, 741
BstDSI CCRYGG 1 cut(s) 104
BstF5I GGATG 2 cut(s) 398, 756
BstFNI CGCG 1 cut(s) 75
BstKTI GATC 3 cut(s) 90, 374, 724
BstMAI GTCTC 3 cut(s) 30, 447, 681
BstMBI GATC 3 cut(s) 87, 371, 721
BstMCI CGRYCG 1 cut(s) 73
BstMWI GCNNNNNNNGC 3 cut(s) 245, 542, 551
BstNI CCWGG 1 cut(s) 150
BstNSI RCATGY 1 cut(s) 439
BstSCI CCNGG 1 cut(s) 148
BstSFI CTRYAG 1 cut(s) 112
BstUI CGCG 1 cut(s) 75
BstV1I GCAGC 5 cut(s) 181, 235, 257, 349, 634
BstZ17I GTATAC 1 cut(s) 262
BsuRI GGCC 1 cut(s) 24
BtgI CCRYGG 1 cut(s) 104
BtsCI GGATG 2 cut(s) 398, 756
Cac8I GCNNGC 4 cut(s) 133, 437, 580, 598
CaiI CAGNNNCTG 1 cut(s) 251
CciI TCATGA 1 cut(s) 718
Cfr10I RCCGGY 1 cut(s) 185
Cfr13I GGNCC 2 cut(s) 108, 638
CspAI ACCGGT 1 cut(s) 185
CviAII CATG 5 cut(s) 105, 242, 295, 436, 719
CviJI RGCY 9 cut(s) 24, 103, 117, 200, 248, 456, 582, 647, 661
CviKI_1 RGCY 9 cut(s) 24, 103, 117, 200, 248, 456, 582, 647, 661
DdeI CTNAG 4 cut(s) 285, 339, 615, 741
DpnI GATC 3 cut(s) 89, 373, 723
DpnII GATC 3 cut(s) 87, 371, 721
EaeI YGGCCR 1 cut(s) 22
Eco130I CCWWGG 1 cut(s) 104
Eco31I GGTCTC 2 cut(s) 447, 681
Eco32I GATATC 1 cut(s) 300
Eco47I GGWCC 2 cut(s) 108, 638
Eco57I CTGAAG 1 cut(s) 636
EcoRI GAATTC 1 cut(s) 681
EcoRII CCWGG 1 cut(s) 148
EcoRV GATATC 1 cut(s) 300
EcoT14I CCWWGG 1 cut(s) 104
ErhI CCWWGG 1 cut(s) 104
FaeI CATG 5 cut(s) 108, 245, 298, 439, 722
FaqI GGGAC 1 cut(s) 614
FatI CATG 5 cut(s) 104, 241, 294, 435, 718
FauI CCCGC 1 cut(s) 128
FblI GTMKAC 1 cut(s) 261
Fnu4HI GCNGC 5 cut(s) 170, 246, 249, 363, 648
FokI GGATG 1 cut(s) 405
Fsp4HI GCNGC 5 cut(s) 170, 246, 249, 363, 648
FspBI CTAG 1 cut(s) 132
GluI GCNGC 5 cut(s) 170, 246, 249, 363, 648
HaeIII GGCC 1 cut(s) 24
HapII CCGG 2 cut(s) 186, 332
Hin1II CATG 5 cut(s) 108, 245, 298, 439, 722
HinfI GANTC 1 cut(s) 627
HpaII CCGG 2 cut(s) 186, 332
Hpy166II GTNNAC 2 cut(s) 262, 471
Hpy188I TCNGA 3 cut(s) 288, 340, 655
Hpy188III TCNNGA 3 cut(s) 35, 686, 719
Hpy8I GTNNAC 2 cut(s) 262, 471
HpyAV CCTTC 2 cut(s) 567, 700
HpyCH4III ACNGT 1 cut(s) 122
HpyCH4IV ACGT 1 cut(s) 92
HpyCH4V TGCA 8 cut(s) 4, 44, 146, 183, 245, 545, 554, 578
HpyF10VI GCNNNNNNNGC 3 cut(s) 245, 542, 551
HpyF3I CTNAG 4 cut(s) 285, 339, 615, 741
HpySE526I ACGT 1 cut(s) 92
Hsp92II CATG 5 cut(s) 108, 245, 298, 439, 722
Kzo9I GATC 3 cut(s) 87, 371, 721
LpnPI CCDG 6 cut(s) 135, 162, 199, 263, 345, 627
Lsp1109I GCAGC 5 cut(s) 181, 235, 257, 349, 634
LweI GCATC 2 cut(s) 290, 583
MaeI CTAG 1 cut(s) 132
MaeII ACGT 1 cut(s) 92
MaeIII GTNAC 2 cut(s) 53, 315
MalI GATC 3 cut(s) 89, 373, 723
MboI GATC 3 cut(s) 87, 371, 721
MlsI TGGCCA 1 cut(s) 24
MluCI AATT 5 cut(s) 62, 193, 523, 565, 681
MluNI TGGCCA 1 cut(s) 24
MlyI GAGTC 1 cut(s) 636
MmeI TCCRAC 1 cut(s) 430
MnlI CCTC 2 cut(s) 334, 671
Mox20I TGGCCA 1 cut(s) 24
MscI TGGCCA 1 cut(s) 24
MseI TTAA 4 cut(s) 95, 368, 521, 587
Msp20I TGGCCA 1 cut(s) 24
MspA1I CMGCKG 1 cut(s) 248
MspI CCGG 2 cut(s) 186, 332
MspR9I CCNGG 1 cut(s) 150
MvaI CCWGG 1 cut(s) 150
MvnI CGCG 1 cut(s) 75
MwoI GCNNNNNNNGC 3 cut(s) 245, 542, 551
NcoI CCATGG 1 cut(s) 104
NdeII GATC 3 cut(s) 87, 371, 721
NheI GCTAGC 1 cut(s) 131
NlaIII CATG 5 cut(s) 108, 245, 298, 439, 722
NlaIV GGNNCC 1 cut(s) 405
NmuCI GTSAC 1 cut(s) 315
NspI RCATGY 1 cut(s) 439
PaeI GCATGC 1 cut(s) 439
PagI TCATGA 1 cut(s) 718
PinAI ACCGGT 1 cut(s) 185
PkrI GCNGC 5 cut(s) 171, 247, 250, 364, 649
PleI GAGTC 1 cut(s) 635
PpsI GAGTC 1 cut(s) 635
Psp6I CCWGG 1 cut(s) 148
PspGI CCWGG 1 cut(s) 148
PspN4I GGNNCC 1 cut(s) 405
PspPI GGNCC 2 cut(s) 108, 638
PstNI CAGNNNCTG 1 cut(s) 251
PvuII CAGCTG 1 cut(s) 248
SaqAI TTAA 4 cut(s) 95, 368, 521, 587
SatI GCNGC 5 cut(s) 170, 246, 249, 363, 648
Sau3AI GATC 3 cut(s) 87, 371, 721
Sau96I GGNCC 2 cut(s) 108, 638
SchI GAGTC 1 cut(s) 636
ScrFI CCNGG 1 cut(s) 150
SetI ASST 7 cut(s) 95, 113, 119, 250, 559, 584, 693
SfaNI GCATC 2 cut(s) 290, 583
SfcI CTRYAG 1 cut(s) 112
SgrAI CRCCGGYG 1 cut(s) 185
SinI GGWCC 2 cut(s) 108, 638
SphI GCATGC 1 cut(s) 439
Sse9I AATT 5 cut(s) 62, 193, 523, 565, 681
SsiI CCGC 4 cut(s) 73, 135, 439, 534
SspMI CTAG 1 cut(s) 132
StyD4I CCNGG 1 cut(s) 148
StyI CCWWGG 1 cut(s) 104
TaaI ACNGT 1 cut(s) 122
TaiI ACGT 1 cut(s) 95
TaqI TCGA 2 cut(s) 34, 685
TaqII GACCGA 1 cut(s) 626
TasI AATT 5 cut(s) 62, 193, 523, 565, 681
Tru1I TTAA 4 cut(s) 95, 368, 521, 587
Tru9I TTAA 4 cut(s) 95, 368, 521, 587
TseFI GTSAC 1 cut(s) 315
TseI GCWGC 5 cut(s) 169, 245, 248, 362, 647
Tsp45I GTSAC 1 cut(s) 315
TspDTI ATGAA 1 cut(s) 75
VpaK11BI GGWCC 2 cut(s) 108, 638
XapI RAATTY 3 cut(s) 62, 193, 681
XceI RCATGY 1 cut(s) 439
XmiI GTMKAC 1 cut(s) 261
XspI CTAG 1 cut(s) 132
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.