Rh5CG558500

Belongs to the glycosyl hydrolase 1 family

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr5C
Physical Location & Seq
Forward (+)
78145710 .. 78149038
3329 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh5CG558500.1

Sequence Viewer

Length: 1596 bp
ATGGCATTCCGATTAGGCATAACCCTCCTACTTGTTCTGGTCTGCACTGCTGTGACAAGCAGTAGAGCTGCCAACTCAAGGCACGGTGACACTTCTTCCCTCCACCGGAGCAGTTTTCCGGCAGGTTTCGTGTTCGGGACAGCTTCATCGGCTTACCAGTATGAAGGTGCTGCAAATGAAGGTGGTAGAGGTCCAAGTATATGGGACACATACACTCGCAAGTATCCCGAGAAGATACACGACCACAGTACTGGAGATGTGGCTATTGATGAGTATCATCGCTATAAGGAAGATATCCGGATTATGAAAGACATGGGGCTTGATGCTTACAGGTTTTCAATTTCATGGTCAAGATTGTTACCAAATGGAAAGCTGAGTGGATGTGCGAACAAGGAAGGAATCAAATATTACAACAACCTCATCAACGAGCTTCTAGCCAATGGCCTTGTACCCTATGTTACACTCTTTCACTGGGATACCCCTCAGGCTTTGGAAGATGAATTCGGTGGCTTCCTTAGCCCTAAAATTGTGGACCATTTCAAGGACTATGCAAATCTCTGCTATAAAGAATTTGGTGACAGAGTTAAGCACTGGATCACGTTAAATGAGCCATGGAGCTACTCCAATGGTGGTTATGTGATTGGAACATTTGCACCAACCCGATGTTCTGATTGGCAAAACTTAAATTGCACGGGTGGAGATTCAGGGACTGAGCCATACTTGGCGTCACATTACCAACTTCTAGCTCATGCCGCCGCCGTAAAATTGTACAGAGACAAATATCAGGCATCACAGAAGGGCGTGATTGGAATAACACTACTATCATATTGGTTCGTGCCATATTCTGATGCAAAGTGGGATGTAGATGCTGCAGAACGTGCATTGGATTTTATGTATGGATGGTTTATGGACCCCCTAATTAATGGAGACTATCCACACAGCATGCGATATCTTGTTGCAGACCGATTACCCAAATTCACAAAAGAAGAATCCAAGTTGCTTAAGGGTTCATTTGATTTTATTGGAGTAAACTACTACACTGCTAACTTTGCAGCCTACAAGGCACCTTGTTTTAATGCTGCTCATCCTAATGTGAATAACCCAAGCTACACTACAGACGCTCTCGTTAATCTTTCAGTCGAGCGTGATGGTGTTCCTATTGGTCCAAAGACTGCTTTGGATTGGCTCTATATTTATCCAGAAGGATTTCGAGAGCTATTGCTCTACACAAAGAACAAGTATAATGATCCAGTTATCTACATCACTGAAAATGGAGTTAATGAGCTGAACGATCCCGGATTATCGCTTGAGGAAGCCCTAACCGATAATCATAGAATTGACTATTACGATGCCCATCTCAGTTATCTTCTTTCAGCAATCAAGGACGGGGTTAAGGTGAAAGGATATTTTGCGTGGTCATTGTTTGATAACTTTGAATGGAATACGGGTTACACTTGTAGATTCGGCCTCAACTTTATAGATTACAAAAATGGACTCAAACGATACCCTAAACTCTCAGCTGGCTGGTTCAAGAAGTTTCTTCAAAAGTGTGTCGAGTTAGACTCAATTTCCTCTCGAAAATTTCAATCAATGTAA

Protein Analysis

531

Amino Acids

60.43

Weight (kDa)

6.29

Isoelectric Point (pI)

21.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_1 PF00232 36 - 515 3.9e-158 Glycosyl hydrolase family 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 113
AccB1I GGYRCC 1 cut(s) 1063
AccIII TCCGGA 1 cut(s) 297
AciI CCGC 2 cut(s) 753, 756
AclWI GGATC 3 cut(s) 602, 1241, 1286
AcsI RAATTY 4 cut(s) 500, 569, 974, 1580
AcyI GRCGYC 1 cut(s) 725
AfaI GTAC 3 cut(s) 250, 450, 770
AfiI CCNNNNNNNGG 3 cut(s) 78, 105, 541
AflII CTTAAG 1 cut(s) 1001
AgsI TTSAA 6 cut(s) 339, 541, 1436, 1531, 1544, 1586
AjuI GAANNNNNNNTTGG 2 cut(s) 649, 681
AleI CACNNNNGTG 1 cut(s) 50
Alw26I GTCTC 2 cut(s) 768, 921
AlwI GGATC 3 cut(s) 602, 1241, 1286
AlwNI CAGNNNCTG 1 cut(s) 710
Ama87I CYCGRG 1 cut(s) 227
Aor13HI TCCGGA 1 cut(s) 297
AoxI GGCC 2 cut(s) 442, 1465
ApeKI GCWGC 5 cut(s) 68, 170, 869, 1052, 1079
ApoI RAATTY 4 cut(s) 500, 569, 974, 1580
AseI ATTAAT 1 cut(s) 921
Asp700I GAANNNNTTC 1 cut(s) 1206
AspS9I GGNCC 4 cut(s) 191, 532, 910, 1163
AsuC2I CCSGG 1 cut(s) 1296
AsuHPI GGTGA 3 cut(s) 98, 587, 1408
AvaI CYCGRG 1 cut(s) 227
AvaII GGWCC 4 cut(s) 191, 532, 910, 1163
AxyI CCTNAGG 1 cut(s) 483
BanI GGYRCC 1 cut(s) 1063
BbvI GCAGC 5 cut(s) 55, 157, 856, 1064, 1066
BccI CCATC 3 cut(s) 894, 1142, 1362
BceAI ACGGC 1 cut(s) 743
BciVI GTATCC 2 cut(s) 234, 469
BcnI CCSGG 1 cut(s) 1296
BcoDI GTCTC 2 cut(s) 768, 921
BfaI CTAG 2 cut(s) 434, 743
BfmI CTRYAG 2 cut(s) 870, 1113
BfrI CTTAAG 1 cut(s) 1001
BfuAI ACCTGC 1 cut(s) 113
BfuI GTATCC 2 cut(s) 234, 469
BglI GCCNNNNNGGC 1 cut(s) 1061
BisI GCNGC 7 cut(s) 69, 171, 753, 756, 870, 1053, 1080
BlsI GCNGC 7 cut(s) 70, 172, 754, 757, 871, 1054, 1081
BmcAI AGTACT 1 cut(s) 250
Bme1390I CCNGG 1 cut(s) 1296
Bme18I GGWCC 4 cut(s) 191, 532, 910, 1163
BmeT110I CYCGRG 1 cut(s) 227
BmgT120I GGNCC 4 cut(s) 191, 532, 910, 1163
BmiI GGNNCC 2 cut(s) 912, 1065
BmrFI CCNGG 1 cut(s) 1296
BmrI ACTGGG 1 cut(s) 481
BmsI GCATC 5 cut(s) 313, 797, 838, 856, 1339
BmuI ACTGGG 1 cut(s) 481
BplI GAGNNNNNCTC 2 cut(s) 1547, 1579
BpmI CTGGAG 1 cut(s) 273
Bpu10I CCTNAGC 1 cut(s) 515
BpuEI CTTGAG 2 cut(s) 61, 1328
BpuMI CCSGG 1 cut(s) 1296
BsaBI GATNNNNATC 2 cut(s) 273, 1353
BsaHI GRCGYC 1 cut(s) 725
BsaJI CCNNGG 1 cut(s) 611
BsaWI WCCGGW 2 cut(s) 105, 297
Bsc4I CCNNNNNNNGG 3 cut(s) 78, 105, 541
Bse1I ACTGG 5 cut(s) 157, 256, 476, 596, 1250
Bse21I CCTNAGG 1 cut(s) 483
Bse8I GATNNNNATC 2 cut(s) 273, 1353
BseAI TCCGGA 1 cut(s) 297
BseDI CCNNGG 1 cut(s) 611
BseGI GGATG 4 cut(s) 386, 865, 905, 1084
BseJI GATNNNNATC 2 cut(s) 273, 1353
BseLI CCNNNNNNNGG 3 cut(s) 78, 105, 541
BseMII CTCAG 5 cut(s) 365, 497, 702, 1372, 1530
BseNI ACTGG 5 cut(s) 157, 256, 476, 596, 1250
BseXI GCAGC 5 cut(s) 55, 157, 856, 1064, 1066
BsgI GTGCAG 1 cut(s) 28
BshFI GGCC 2 cut(s) 444, 1467
BshNI GGYRCC 1 cut(s) 1063
BsiHKCI CYCGRG 1 cut(s) 227
BsiSI CCGG 4 cut(s) 106, 119, 298, 1296
BslFI GGGAC 3 cut(s) 151, 218, 721
BslI CCNNNNNNNGG 3 cut(s) 78, 105, 541
BsmAI GTCTC 2 cut(s) 768, 921
BsmFI GGGAC 3 cut(s) 151, 218, 721
BsmI GAATGC 1 cut(s) 5
BsnI GGCC 2 cut(s) 444, 1467
BsoBI CYCGRG 1 cut(s) 227
Bsp13I TCCGGA 1 cut(s) 297
Bsp1407I TGTACA 1 cut(s) 768
Bsp143I GATC 3 cut(s) 594, 1246, 1291
Bsp19I CCATGG 1 cut(s) 611
BspACI CCGC 2 cut(s) 753, 756
BspANI GGCC 2 cut(s) 444, 1467
BspCNI CTCAG 5 cut(s) 366, 496, 703, 1371, 1529
BspEI TCCGGA 1 cut(s) 297
BspLI GGNNCC 2 cut(s) 912, 1065
BspMAI CTGCAG 1 cut(s) 874
BspMI ACCTGC 1 cut(s) 113
BspPI GGATC 3 cut(s) 602, 1241, 1286
BspT107I GGYRCC 1 cut(s) 1063
BspTI CTTAAG 1 cut(s) 1001
BsrGI TGTACA 1 cut(s) 768
BsrI ACTGG 5 cut(s) 157, 256, 476, 596, 1250
BssECI CCNNGG 1 cut(s) 611
BssMI GATC 3 cut(s) 594, 1246, 1291
BssNI GRCGYC 1 cut(s) 725
BssT1I CCWWGG 1 cut(s) 611
Bst4CI ACNGT 2 cut(s) 86, 248
BstACI GRCGYC 1 cut(s) 725
BstAFI CTTAAG 1 cut(s) 1001
BstAPI GCANNNNNTGC 1 cut(s) 878
BstAUI TGTACA 1 cut(s) 768
BstC8I GCNNGC 2 cut(s) 944, 1522
BstDEI CTNAG 6 cut(s) 374, 483, 515, 711, 1358, 1516
BstDSI CCRYGG 1 cut(s) 611
BstF5I GGATG 4 cut(s) 386, 865, 905, 1084
BstKTI GATC 3 cut(s) 597, 1249, 1294
BstMAI GTCTC 2 cut(s) 768, 921
BstMBI GATC 3 cut(s) 594, 1246, 1291
BstMWI GCNNNNNNNGC 6 cut(s) 149, 516, 752, 878, 1049, 1061
BstNSI RCATGY 1 cut(s) 946
BstSCI CCNGG 1 cut(s) 1294
BstSFI CTRYAG 2 cut(s) 870, 1113
BstV1I GCAGC 5 cut(s) 55, 157, 856, 1064, 1066
BstXI CCANNNNNNTGG 2 cut(s) 201, 251
Bsu36I CCTNAGG 1 cut(s) 483
BsuI GTATCC 2 cut(s) 234, 469
BsuRI GGCC 2 cut(s) 444, 1467
BtgI CCRYGG 1 cut(s) 611
BtgZI GCGATG 1 cut(s) 263
BtsCI GGATG 4 cut(s) 386, 865, 905, 1084
BtsI GCAGTG 2 cut(s) 45, 1038
BtsIMutI CAGTG 5 cut(s) 45, 469, 589, 1038, 1263
BveI ACCTGC 1 cut(s) 113
Cac8I GCNNGC 2 cut(s) 944, 1522
CaiI CAGNNNCTG 1 cut(s) 710
Cfr13I GGNCC 4 cut(s) 191, 532, 910, 1163
CseI GACGC 2 cut(s) 714, 1127
Csp6I GTAC 3 cut(s) 249, 449, 769
CviAII CATG 5 cut(s) 313, 345, 612, 749, 943
CviQI GTAC 3 cut(s) 249, 449, 769
DdeI CTNAG 6 cut(s) 374, 483, 515, 711, 1358, 1516
DpnI GATC 3 cut(s) 596, 1248, 1293
DpnII GATC 3 cut(s) 594, 1246, 1291
Eco130I CCWWGG 1 cut(s) 611
Eco32I GATATC 2 cut(s) 295, 950
Eco47I GGWCC 4 cut(s) 191, 532, 910, 1163
Eco81I CCTNAGG 1 cut(s) 483
Eco88I CYCGRG 1 cut(s) 227
EcoRI GAATTC 1 cut(s) 500
EcoRV GATATC 2 cut(s) 295, 950
EcoT14I CCWWGG 1 cut(s) 611
ErhI CCWWGG 1 cut(s) 611
FaeI CATG 5 cut(s) 316, 348, 615, 752, 946
FaqI GGGAC 3 cut(s) 151, 218, 721
FatI CATG 5 cut(s) 312, 344, 611, 748, 942
Fnu4HI GCNGC 7 cut(s) 69, 171, 753, 756, 870, 1053, 1080
FokI GGATG 4 cut(s) 393, 872, 912, 1071
Fsp4HI GCNGC 7 cut(s) 69, 171, 753, 756, 870, 1053, 1080
FspBI CTAG 2 cut(s) 434, 743
GluI GCNGC 7 cut(s) 69, 171, 753, 756, 870, 1053, 1080
GsuI CTGGAG 1 cut(s) 273
HaeIII GGCC 2 cut(s) 444, 1467
HapII CCGG 4 cut(s) 106, 119, 298, 1296
HgaI GACGC 2 cut(s) 714, 1127
Hin1I GRCGYC 1 cut(s) 725
Hin1II CATG 5 cut(s) 316, 348, 615, 752, 946
HinfI GANTC 6 cut(s) 399, 701, 989, 1461, 1494, 1562
HpaII CCGG 4 cut(s) 106, 119, 298, 1296
HphI GGTGA 3 cut(s) 98, 587, 1408
Hpy166II GTNNAC 2 cut(s) 532, 1030
Hpy188I TCNGA 3 cut(s) 11, 670, 847
Hpy188III TCNNGA 8 cut(s) 136, 227, 298, 351, 1199, 1211, 1531, 1575
Hpy8I GTNNAC 2 cut(s) 532, 1030
HpyAV CCTTC 5 cut(s) 158, 173, 389, 790, 1196
HpyCH4III ACNGT 2 cut(s) 86, 248
HpyCH4IV ACGT 2 cut(s) 599, 877
HpyF10VI GCNNNNNNNGC 6 cut(s) 149, 516, 752, 878, 1049, 1061
HpyF3I CTNAG 6 cut(s) 374, 483, 515, 711, 1358, 1516
HpySE526I ACGT 2 cut(s) 599, 877
Hsp92I GRCGYC 1 cut(s) 725
Hsp92II CATG 5 cut(s) 316, 348, 615, 752, 946
Kpn2I TCCGGA 1 cut(s) 297
Kzo9I GATC 3 cut(s) 594, 1246, 1291
LmnI GCTCC 2 cut(s) 108, 615
Lsp1109I GCAGC 5 cut(s) 55, 157, 856, 1064, 1066
LweI GCATC 5 cut(s) 313, 797, 838, 856, 1339
MaeI CTAG 2 cut(s) 434, 743
MaeII ACGT 2 cut(s) 599, 877
MaeIII GTNAC 7 cut(s) 52, 86, 357, 457, 575, 726, 1448
MalI GATC 3 cut(s) 596, 1248, 1293
MboI GATC 3 cut(s) 594, 1246, 1291
MboII GAAGA 7 cut(s) 87, 244, 302, 506, 998, 1358, 1532
MlyI GAGTC 2 cut(s) 1488, 1556
MnlI CCTC 8 cut(s) 35, 110, 182, 428, 492, 1303, 1478, 1582
MroI TCCGGA 1 cut(s) 297
MroXI GAANNNNTTC 1 cut(s) 1206
MseI TTAA 9 cut(s) 585, 602, 683, 921, 1002, 1074, 1128, 1278, 1392
MslI CAYNNNNRTG 2 cut(s) 50, 1089
MspA1I CMGCKG 1 cut(s) 1520
MspCI CTTAAG 1 cut(s) 1001
MspI CCGG 4 cut(s) 106, 119, 298, 1296
MspR9I CCNGG 1 cut(s) 1296
Mva1269I GAATGC 1 cut(s) 5
MwoI GCNNNNNNNGC 6 cut(s) 149, 516, 752, 878, 1049, 1061
NciI CCSGG 1 cut(s) 1296
NcoI CCATGG 1 cut(s) 611
NdeII GATC 3 cut(s) 594, 1246, 1291
NlaIII CATG 5 cut(s) 316, 348, 615, 752, 946
NlaIV GGNNCC 2 cut(s) 912, 1065
NmuCI GTSAC 4 cut(s) 52, 86, 575, 726
NspI RCATGY 1 cut(s) 946
OliI CACNNNNGTG 1 cut(s) 50
PaeI GCATGC 1 cut(s) 946
PctI GAATGC 1 cut(s) 5
PdmI GAANNNNTTC 1 cut(s) 1206
PfeI GAWTC 4 cut(s) 399, 701, 989, 1461
PfoI TCCNGGA 1 cut(s) 1294
PkrI GCNGC 7 cut(s) 70, 172, 754, 757, 871, 1054, 1081
PleI GAGTC 2 cut(s) 1488, 1556
PpsI GAGTC 2 cut(s) 1488, 1556
PshBI ATTAAT 1 cut(s) 921
PspN4I GGNNCC 2 cut(s) 912, 1065
PspPI GGNCC 4 cut(s) 191, 532, 910, 1163
PstI CTGCAG 1 cut(s) 874
PstNI CAGNNNCTG 1 cut(s) 710
PvuII CAGCTG 1 cut(s) 1520
RsaI GTAC 3 cut(s) 250, 450, 770
RsaNI GTAC 3 cut(s) 249, 449, 769
RseI CAYNNNNRTG 2 cut(s) 50, 1089
SaqAI TTAA 9 cut(s) 585, 602, 683, 921, 1002, 1074, 1128, 1278, 1392
SatI GCNGC 7 cut(s) 69, 171, 753, 756, 870, 1053, 1080
Sau3AI GATC 3 cut(s) 594, 1246, 1291
Sau96I GGNCC 4 cut(s) 191, 532, 910, 1163
ScaI AGTACT 1 cut(s) 250
SchI GAGTC 2 cut(s) 1488, 1556
ScrFI CCNGG 1 cut(s) 1296
SfaNI GCATC 5 cut(s) 313, 797, 838, 856, 1339
SfcI CTRYAG 2 cut(s) 870, 1113
SinI GGWCC 4 cut(s) 191, 532, 910, 1163
SmiMI CAYNNNNRTG 2 cut(s) 50, 1089
SmlI CTYRAG 3 cut(s) 76, 1001, 1307
SmoI CTYRAG 3 cut(s) 76, 1001, 1307
SphI GCATGC 1 cut(s) 946
SsiI CCGC 2 cut(s) 753, 756
SspI AATATT 1 cut(s) 407
SspMI CTAG 2 cut(s) 434, 743
StyD4I CCNGG 1 cut(s) 1294
StyI CCWWGG 1 cut(s) 611
TaaI ACNGT 2 cut(s) 86, 248
TaiI ACGT 2 cut(s) 602, 880
TaqI TCGA 4 cut(s) 1140, 1210, 1554, 1576
TaqII GACCGA 1 cut(s) 978
TatI WGTACW 2 cut(s) 248, 768
TauI GCSGC 2 cut(s) 755, 758
TfiI GAWTC 4 cut(s) 399, 701, 989, 1461
Tru1I TTAA 9 cut(s) 585, 602, 683, 921, 1002, 1074, 1128, 1278, 1392
Tru9I TTAA 9 cut(s) 585, 602, 683, 921, 1002, 1074, 1128, 1278, 1392
TscAI CASTG 5 cut(s) 52, 476, 596, 1045, 1270
TseFI GTSAC 4 cut(s) 52, 86, 575, 726
TseI GCWGC 5 cut(s) 68, 170, 869, 1052, 1079
Tsp45I GTSAC 4 cut(s) 52, 86, 575, 726
TspDTI ATGAA 7 cut(s) 135, 177, 192, 320, 333, 513, 999
TspRI CASTG 5 cut(s) 52, 476, 596, 1045, 1270
Vha464I CTTAAG 1 cut(s) 1001
VpaK11BI GGWCC 4 cut(s) 191, 532, 910, 1163
VspI ATTAAT 1 cut(s) 921
XapI RAATTY 4 cut(s) 500, 569, 974, 1580
XceI RCATGY 1 cut(s) 946
XmnI GAANNNNTTC 1 cut(s) 1206
XspI CTAG 2 cut(s) 434, 743
ZrmI AGTACT 1 cut(s) 250
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.