Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr03

Orthogroup ID

OG0000117

Physical Location & Seq

Genomic Coordinates Reverse (-)

1710175 .. 1714079

Gene Structure 3905 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD03G1021600.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1671 bp

ATGCAGCATGGTAGGAAGACACGCAAGAAACACTCACAGTTAACTATGGCAATGCAGTATCGTTCTTTGCTTTTGTGTATGGCACTACTCATTGGTTTCGCATCGACAAAAACCAATGCTGCCGATACTGATCGACCAGTTAAATGTGGTTTGCTTCACAGGGAAAGCTTTGATTTTCTTGAACCAGAGTTCCTATTTGGCGCAGCTTCCGCATCTTATCAGGTAGAAGGTGCTTGGAATGAACATGGCAGAGGACCAAGCATATGGGATAACTACACCCACCAATATCCAGAAAGGATCGTTAATCGAAGCAATGGAGACATCGCTATTGATCAATATCACCGTTACAAGGAAGATGTGGGCATCATGAAGAATATGGGGATGGATTCTTATAGGTTCTCTATCTCATGGTCAAGATTGTTACCAAATGGAAAGCTAAGCGGGGGAGTTAACATGGAAGGAATCAAATACTACAACAATCTAATCGATGAACTCCTACGCAGTGGTCTAACGCCATTCGTGACACTTTTTCACTGGGATATTCCCCAAGCTTTAGTTGACGAGTATGGTGGTTTATTAAGTCCTCGTATTGTGGATCACTTTAAGGATTATGCAGATCTTTGTTTTATGCATTTTGGTGACCGAGTAAAGCACTGGCTCACTTTGAATGAGCCATTTACTGTAAGTAACCATGGTTATGCAATCGGGACTCACGCACCGGGACGATGCTCTGCTTGGCAAAAACTGAACTGCATTGGTGGAAATTCAGCTGTTGAACCATATTTGGTGACACACCACCAACTCCTTTCTCATGCAGCCACTGTGAAGTTGTACAAGACTAAATACCAGGCATATCAAAATGGTGCGATCGGATTAGCAGTAGTGACACACTGGTTTGAGCCTGCTTCGAAGGCAAAAAAAGATATAGATGCCGCAAATCGAGCTTTGGATTTTATGTTTGGATGGTTTATGGACCCAATCACAACTGGTGACTATCCCCGGAGCATGCGAACATATGTTGGATCACGATTACCTCAATTCACAAAAGAGCAGTCCGATTCTCTAAATGGGTCATATGATTTTATAGGAATCAATTACTACTCTGCTAGATATGCAAGCAATCCACTAGAGAATTCATCTGACCCTGAAAGCTACATAAATGATCCTCATGTTAATGCGACAACTGAGGTTAATGGAAAACCCATTGGTCCACGGGCTGCTTCGGATTGGTTATACATTTATCCAAAAGGAATTCACGATCTTATGATTTATACCAAGGAAAAGTATAATGATCCAGCCATTTATATTACTGAAAATGGCGTCGATGAGTTCACTAATAGCAGCTTATCACTCGAACAAGCCCTTAATGATACCATAAGAGTCAACTACTATCGTGACCACCTTTGTCACCTTCAAGCAGCAATTCAATCGGGTGCTAAAGTAAAAGGATACTTTGCATGGTCGATACTGGATAACTTTGAATGGGCAGAGGGATATCGTAGTCGATTTGGTCTTAACTATGTGGACTATGATGGTGCACTGACAAGGTACCCAAAACGCTCGGCGAACTGGTTCAAAACTTTCTTGAAGAAGAGCCAAAGAAATATGAAAAATATTCAAGTACCTGCGGATGATAATGATGAGGACATCAAACTTATTTATCAAATTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004553 GO:0008150 GO:0008152 GO:0008422 GO:0015926 GO:0016787 GO:0016798 GO:0071704 GO:1901135 GO:1901657

KEGG Pathways

Metabolic & Signaling

ko00460 ko00500 ko00940 ko01100 ko01110 map00460 map00500 map00940 map01100 map01110

Pfam Domains

Protein Families

Glyco_hydro_1

Protein Analysis

557

Amino Acids

63.58

Weight (kDa)

6.85

Isoelectric Point (pI)

24.57

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_hydro_1	PF00232	62 - 531	4e-160	Glycosyl hydrolase family 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000117)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca	FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica	MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica	Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis	pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis	RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata	RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora	Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii	Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa	Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha	Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana	Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1633
Acc65I	GGTACC	1 cut(s)	1548
AccB1I	GGYRCC	1 cut(s)	1548
AciI	CCGC	4 cut(s)	210, 441, 933, 1628
AclWI	GGATC	5 cut(s)	305, 603, 1030, 1157, 1286
AcsI	RAATTY	4 cut(s)	763, 1132, 1251, 1665
AcyI	GRCGYC	1 cut(s)	1320
AfaI	GTAC	3 cut(s)	833, 1550, 1623
AfiI	CCNNNNNNNGG	1 cut(s)	349
AgsI	TTSAA	9 cut(s)	182, 667, 776, 1415, 1427, 1481, 1576, 1588, 1619
AjnI	CCWGG	1 cut(s)	846
AloI	GAACNNNNNNTCC	2 cut(s)	174, 206
AluBI	AGCT	8 cut(s)	168, 206, 436, 551, 770, 944, 1152, 1344
AluI	AGCT	8 cut(s)	168, 206, 436, 551, 770, 944, 1152, 1344
Alw21I	GWGCWC	1 cut(s)	1540
Alw26I	GTCTC	1 cut(s)	312
Alw44I	GTGCAC	1 cut(s)	1536
AlwI	GGATC	5 cut(s)	305, 603, 1030, 1157, 1286
AlwNI	CAGNNNCTG	1 cut(s)	821
ApaLI	GTGCAC	1 cut(s)	1536
ApeKI	GCWGC	7 cut(s)	4, 119, 203, 815, 1217, 1341, 1418
ApoI	RAATTY	4 cut(s)	763, 1132, 1251, 1665
ArsI	GACNNNNNNTTYG	2 cut(s)	1037, 1069
Asp700I	GAANNNNTTC	1 cut(s)	1571
Asp718I	GGTACC	1 cut(s)	1548
AspLEI	GCGC	1 cut(s)	203
AspS9I	GGNCC	3 cut(s)	254, 973, 1208
AsuC2I	CCSGG	2 cut(s)	720, 1000
AsuHPI	GGTGA	5 cut(s)	332, 650, 799, 1001, 1400
AsuII	TTCGAA	1 cut(s)	908
AvaII	GGWCC	3 cut(s)	254, 973, 1208
BaeGI	GKGCMC	1 cut(s)	1540
BanI	GGYRCC	1 cut(s)	1548
BbsI	GAAGAC	1 cut(s)	23
Bbv12I	GWGCWC	1 cut(s)	1540
BbvI	GCAGC	7 cut(s)	16, 106, 215, 827, 1204, 1353, 1430
BccI	CCATC	3 cut(s)	376, 957, 1526
BcgI	CGANNNNNNTGC	2 cut(s)	1410, 1444
BciT130I	CCWGG	1 cut(s)	848
BciVI	GTATCC	1 cut(s)	1442
BclI	TGATCA	1 cut(s)	331
BcnI	CCSGG	2 cut(s)	720, 1000
BcoDI	GTCTC	1 cut(s)	312
BfaI	CTAG	2 cut(s)	1107, 1127
BfuAI	ACCTGC	1 cut(s)	1633
BfuI	GTATCC	1 cut(s)	1442
BglII	AGATCT	1 cut(s)	616
BisI	GCNGC	8 cut(s)	5, 120, 204, 816, 933, 1218, 1342, 1419
BlpI	GCTNAGC	1 cut(s)	437
BlsI	GCNGC	8 cut(s)	6, 121, 205, 817, 934, 1219, 1343, 1420
Bme1390I	CCNGG	3 cut(s)	720, 848, 1000
Bme18I	GGWCC	3 cut(s)	254, 973, 1208
BmgT120I	GGNCC	3 cut(s)	254, 973, 1208
BmiI	GGNNCC	2 cut(s)	975, 1550
BmrFI	CCNGG	3 cut(s)	720, 848, 1000
BmrI	ACTGGG	1 cut(s)	544
BmsI	GCATC	5 cut(s)	110, 221, 372, 716, 919
BmuI	ACTGGG	1 cut(s)	544
BpiI	GAAGAC	1 cut(s)	23
Bpu1102I	GCTNAGC	1 cut(s)	437
Bpu14I	TTCGAA	1 cut(s)	908
BpuMI	CCSGG	2 cut(s)	720, 1000
Bsa29I	ATCGAT	1 cut(s)	486
BsaBI	GATNNNNATC	2 cut(s)	129, 336
BsaHI	GRCGYC	1 cut(s)	1320
BsaJI	CCNNGG	4 cut(s)	691, 998, 1211, 1275
Bsc4I	CCNNNNNNNGG	1 cut(s)	349
Bse1I	ACTGG	7 cut(s)	137, 539, 659, 896, 991, 1473, 1574
Bse3DI	GCAATG	2 cut(s)	57, 319
Bse8I	GATNNNNATC	2 cut(s)	129, 336
BseBI	CCWGG	1 cut(s)	848
BseCI	ATCGAT	1 cut(s)	486
BseDI	CCNNGG	4 cut(s)	691, 998, 1211, 1275
BseGI	GGATG	3 cut(s)	387, 968, 1636
BseJI	GATNNNNATC	2 cut(s)	129, 336
BseLI	CCNNNNNNNGG	1 cut(s)	349
BseMI	GCAATG	2 cut(s)	57, 319
BseMII	CTCAG	1 cut(s)	1176
BseNI	ACTGG	7 cut(s)	137, 539, 659, 896, 991, 1473, 1574
BseSI	GKGCMC	1 cut(s)	1540
BseXI	GCAGC	7 cut(s)	16, 106, 215, 827, 1204, 1353, 1430
Bsh1285I	CGRYCG	1 cut(s)	870
BshNI	GGYRCC	1 cut(s)	1548
BshVI	ATCGAT	1 cut(s)	486
BsiEI	CGRYCG	1 cut(s)	870
BsiHKAI	GWGCWC	1 cut(s)	1540
BsiSI	CCGG	2 cut(s)	719, 1000
BslFI	GGGAC	2 cut(s)	721, 735
BslI	CCNNNNNNNGG	1 cut(s)	349
BsmAI	GTCTC	1 cut(s)	312
BsmFI	GGGAC	2 cut(s)	721, 735
Bsp119I	TTCGAA	1 cut(s)	908
Bsp1286I	GDGCHC	1 cut(s)	1540
Bsp1407I	TGTACA	1 cut(s)	831
Bsp1720I	GCTNAGC	1 cut(s)	437
Bsp19I	CCATGG	1 cut(s)	691
BspACI	CCGC	4 cut(s)	210, 441, 933, 1628
BspCNI	CTCAG	1 cut(s)	1177
BspDI	ATCGAT	1 cut(s)	486
BspHI	TCATGA	1 cut(s)	366
BspLI	GGNNCC	2 cut(s)	975, 1550
BspMI	ACCTGC	1 cut(s)	1633
BspPI	GGATC	5 cut(s)	305, 603, 1030, 1157, 1286
BspQI	GCTCTTC	1 cut(s)	1586
BspT104I	TTCGAA	1 cut(s)	908
BspT107I	GGYRCC	1 cut(s)	1548
BsrDI	GCAATG	2 cut(s)	57, 319
BsrGI	TGTACA	1 cut(s)	831
BsrI	ACTGG	7 cut(s)	137, 539, 659, 896, 991, 1473, 1574
BssECI	CCNNGG	4 cut(s)	691, 998, 1211, 1275
BssNI	GRCGYC	1 cut(s)	1320
BssT1I	CCWWGG	2 cut(s)	691, 1275
Bst2UI	CCWGG	1 cut(s)	848
Bst4CI	ACNGT	4 cut(s)	39, 344, 682, 823
Bst6I	CTCTTC	1 cut(s)	1586
BstACI	GRCGYC	1 cut(s)	1320
BstAUI	TGTACA	1 cut(s)	831
BstBI	TTCGAA	1 cut(s)	908
BstC8I	GCNNGC	3 cut(s)	903, 1007, 1117
BstDEI	CTNAG	2 cut(s)	437, 1185
BstDSI	CCRYGG	2 cut(s)	691, 1211
BstEII	GGTNACC	1 cut(s)	638
BstF5I	GGATG	3 cut(s)	387, 968, 1636
BstHHI	GCGC	1 cut(s)	203
BstMAI	GTCTC	1 cut(s)	312
BstMCI	CGRYCG	1 cut(s)	870
BstMWI	GCNNNNNNNGC	4 cut(s)	209, 911, 941, 1112
BstNI	CCWGG	1 cut(s)	848
BstNSI	RCATGY	1 cut(s)	1009
BstPI	GGTNACC	1 cut(s)	638
BstSCI	CCNGG	3 cut(s)	718, 846, 998
BstSLI	GKGCMC	1 cut(s)	1540
BstV1I	GCAGC	7 cut(s)	16, 106, 215, 827, 1204, 1353, 1430
BstV2I	GAAGAC	1 cut(s)	23
BstX2I	RGATCY	1 cut(s)	616
BstXI	CCANNNNNNTGG	1 cut(s)	264
BstYI	RGATCY	1 cut(s)	616
Bsu15I	ATCGAT	1 cut(s)	486
BsuI	GTATCC	1 cut(s)	1442
BsuTUI	ATCGAT	1 cut(s)	486
BtgI	CCRYGG	2 cut(s)	691, 1211
BtgZI	GCGATG	1 cut(s)	307
BtsCI	GGATG	3 cut(s)	387, 968, 1636
BtsI	GCAGTG	1 cut(s)	508
BtsIMutI	CAGTG	6 cut(s)	508, 532, 652, 819, 889, 1538
BveI	ACCTGC	1 cut(s)	1633
Cac8I	GCNNGC	3 cut(s)	903, 1007, 1117
CaiI	CAGNNNCTG	1 cut(s)	821
CciI	TCATGA	1 cut(s)	366
CfoI	GCGC	1 cut(s)	203
Cfr13I	GGNCC	3 cut(s)	254, 973, 1208
ClaI	ATCGAT	1 cut(s)	486
CseI	GACGC	1 cut(s)	1309
Csp6I	GTAC	3 cut(s)	832, 1549, 1622
CviQI	GTAC	3 cut(s)	832, 1549, 1622
DdeI	CTNAG	2 cut(s)	437, 1185
Eam1104I	CTCTTC	1 cut(s)	1586
EarI	CTCTTC	1 cut(s)	1586
Eco130I	CCWWGG	2 cut(s)	691, 1275
Eco32I	GATATC	1 cut(s)	1496
Eco47I	GGWCC	3 cut(s)	254, 973, 1208
Eco91I	GGTNACC	1 cut(s)	638
EcoO65I	GGTNACC	1 cut(s)	638
EcoRI	GAATTC	2 cut(s)	1132, 1251
EcoRII	CCWGG	1 cut(s)	846
EcoRV	GATATC	1 cut(s)	1496
EcoT14I	CCWWGG	2 cut(s)	691, 1275
EcoT22I	ATGCAT	1 cut(s)	633
ErhI	CCWWGG	2 cut(s)	691, 1275
FaqI	GGGAC	2 cut(s)	721, 735
FauI	CCCGC	1 cut(s)	434
FauNDI	CATATG	3 cut(s)	263, 1015, 1075
FbaI	TGATCA	1 cut(s)	331
Fnu4HI	GCNGC	8 cut(s)	5, 120, 204, 816, 933, 1218, 1342, 1419
FokI	GGATG	3 cut(s)	394, 975, 1643
Fsp4HI	GCNGC	8 cut(s)	5, 120, 204, 816, 933, 1218, 1342, 1419
FspBI	CTAG	2 cut(s)	1107, 1127
GlaI	GCGC	1 cut(s)	202
GluI	GCNGC	8 cut(s)	5, 120, 204, 816, 933, 1218, 1342, 1419
HapII	CCGG	2 cut(s)	719, 1000
HgaI	GACGC	1 cut(s)	1309
HhaI	GCGC	1 cut(s)	203
Hin1I	GRCGYC	1 cut(s)	1320
Hin6I	GCGC	1 cut(s)	201
HinP1I	GCGC	1 cut(s)	201
HincII	GTYRAC	4 cut(s)	42, 451, 559, 1384
HindII	GTYRAC	4 cut(s)	42, 451, 559, 1384
HindIII	AAGCTT	2 cut(s)	166, 549
HinfI	GANTC	6 cut(s)	386, 462, 709, 1058, 1089, 1380
HpaI	GTTAAC	2 cut(s)	42, 451
HpaII	CCGG	2 cut(s)	719, 1000
HphI	GGTGA	5 cut(s)	332, 650, 799, 1001, 1400
Hpy166II	GTNNAC	8 cut(s)	42, 451, 559, 1211, 1332, 1384, 1525, 1538
Hpy188I	TCNGA	4 cut(s)	872, 1057, 1141, 1225
Hpy8I	GTNNAC	8 cut(s)	42, 451, 559, 1211, 1332, 1384, 1525, 1538
Hpy99I	CGWCG	1 cut(s)	1325
HpyAV	CCTTC	4 cut(s)	221, 452, 904, 1421
HpyCH4III	ACNGT	4 cut(s)	39, 344, 682, 823
HpyF10VI	GCNNNNNNNGC	4 cut(s)	209, 911, 941, 1112
HpyF3I	CTNAG	2 cut(s)	437, 1185
Hsp92I	GRCGYC	1 cut(s)	1320
HspAI	GCGC	1 cut(s)	201
KpnI	GGTACC	1 cut(s)	1552
Ksp22I	TGATCA	1 cut(s)	331
KspAI	GTTAAC	2 cut(s)	42, 451
LguI	GCTCTTC	1 cut(s)	1586
LmnI	GCTCC	1 cut(s)	1002
Lsp1109I	GCAGC	7 cut(s)	16, 106, 215, 827, 1204, 1353, 1430
LweI	GCATC	5 cut(s)	110, 221, 372, 716, 919
MaeI	CTAG	2 cut(s)	1107, 1127
MboII	GAAGA	5 cut(s)	28, 365, 382, 1600, 1603
MflI	RGATCY	1 cut(s)	616
MhlI	GDGCHC	1 cut(s)	1540
MluCI	AATT	7 cut(s)	763, 1037, 1093, 1132, 1251, 1422, 1665
MlyI	GAGTC	2 cut(s)	703, 1389
MmeI	TCCRAC	1 cut(s)	1000
MnlI	CCTC	7 cut(s)	245, 594, 1044, 1176, 1180, 1483, 1636
Mph1103I	ATGCAT	1 cut(s)	633
MroXI	GAANNNNTTC	1 cut(s)	1571
MslI	CAYNNNNRTG	3 cut(s)	636, 696, 1173
MspA1I	CMGCKG	1 cut(s)	770
MspI	CCGG	2 cut(s)	719, 1000
MspR9I	CCNGG	3 cut(s)	720, 848, 1000
MvaI	CCWGG	1 cut(s)	848
MwoI	GCNNNNNNNGC	4 cut(s)	209, 911, 941, 1112
NciI	CCSGG	2 cut(s)	720, 1000
NcoI	CCATGG	1 cut(s)	691
NdeI	CATATG	3 cut(s)	263, 1015, 1075
NlaIV	GGNNCC	2 cut(s)	975, 1550
NmeAIII	GCCGAG	1 cut(s)	1541
NmuCI	GTSAC	7 cut(s)	520, 638, 787, 883, 989, 1394, 1406
NsiI	ATGCAT	1 cut(s)	633
NspI	RCATGY	1 cut(s)	1009
NspV	TTCGAA	1 cut(s)	908
PaeI	GCATGC	1 cut(s)	1009
PagI	TCATGA	1 cut(s)	366
PciSI	GCTCTTC	1 cut(s)	1586
PdmI	GAANNNNTTC	1 cut(s)	1571
PfeI	GAWTC	4 cut(s)	386, 462, 1058, 1089
PkrI	GCNGC	8 cut(s)	6, 121, 205, 817, 934, 1219, 1343, 1420
Ple19I	CGATCG	1 cut(s)	870
PleI	GAGTC	2 cut(s)	703, 1388
PpsI	GAGTC	2 cut(s)	703, 1388
Psp6I	CCWGG	1 cut(s)	846
PspEI	GGTNACC	1 cut(s)	638
PspGI	CCWGG	1 cut(s)	846
PspN4I	GGNNCC	2 cut(s)	975, 1550
PspPI	GGNCC	3 cut(s)	254, 973, 1208
PstNI	CAGNNNCTG	1 cut(s)	821
PsuI	RGATCY	1 cut(s)	616
PvuI	CGATCG	1 cut(s)	870
PvuII	CAGCTG	1 cut(s)	770
RsaI	GTAC	3 cut(s)	833, 1550, 1623
RsaNI	GTAC	3 cut(s)	832, 1549, 1622
RseI	CAYNNNNRTG	3 cut(s)	636, 696, 1173
SapI	GCTCTTC	1 cut(s)	1586
SatI	GCNGC	8 cut(s)	5, 120, 204, 816, 933, 1218, 1342, 1419
Sau96I	GGNCC	3 cut(s)	254, 973, 1208
SchI	GAGTC	2 cut(s)	703, 1389
ScrFI	CCNGG	3 cut(s)	720, 848, 1000
SduI	GDGCHC	1 cut(s)	1540
SfaNI	GCATC	5 cut(s)	110, 221, 372, 716, 919
SfuI	TTCGAA	1 cut(s)	908
SinI	GGWCC	3 cut(s)	254, 973, 1208
SmiMI	CAYNNNNRTG	3 cut(s)	636, 696, 1173
SphI	GCATGC	1 cut(s)	1009
Sse9I	AATT	7 cut(s)	763, 1037, 1093, 1132, 1251, 1422, 1665
SsiI	CCGC	4 cut(s)	210, 441, 933, 1628
SspI	AATATT	1 cut(s)	1615
SspMI	CTAG	2 cut(s)	1107, 1127
StyD4I	CCNGG	3 cut(s)	718, 846, 998
StyI	CCWWGG	2 cut(s)	691, 1275
TaaI	ACNGT	4 cut(s)	39, 344, 682, 823
TaqII	GACCGA	1 cut(s)	657
TasI	AATT	7 cut(s)	763, 1037, 1093, 1132, 1251, 1422, 1665
TatI	WGTACW	1 cut(s)	831
TauI	GCSGC	1 cut(s)	935
TfiI	GAWTC	4 cut(s)	386, 462, 1058, 1089
TscAI	CASTG	6 cut(s)	508, 539, 659, 826, 896, 1545
TseFI	GTSAC	7 cut(s)	520, 638, 787, 883, 989, 1394, 1406
TseI	GCWGC	7 cut(s)	4, 119, 203, 815, 1217, 1341, 1418
Tsp45I	GTSAC	7 cut(s)	520, 638, 787, 883, 989, 1394, 1406
TspDTI	ATGAA	5 cut(s)	255, 383, 504, 1125, 1622
TspRI	CASTG	6 cut(s)	508, 539, 659, 826, 896, 1545
VneI	GTGCAC	1 cut(s)	1536
VpaK11BI	GGWCC	3 cut(s)	254, 973, 1208
XapI	RAATTY	4 cut(s)	763, 1132, 1251, 1665
XceI	RCATGY	1 cut(s)	1009
XmnI	GAANNNNTTC	1 cut(s)	1571
XspI	CTAG	2 cut(s)	1107, 1127
Zsp2I	ATGCAT	1 cut(s)	633

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.