pycom03g05540

Belongs to the glycosyl hydrolase 1 family

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Forward (+)
4404311 .. 4407421
3111 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g05540.6

Sequence Viewer

Length: 1539 bp
ATGGCAATGAGGTTACAGTCACTGCTGTTGGGTGTGCTACTACTAACTGGCTTTGCAGCGGCAGATGGTAAAACTACTGCTGTTATACCCAGTCGTTATAGCAGTGCTTCCCTGAACAGAAGCAGTTTTCCATCAGGCTTTGTATTTGGTTCAGCTTCAGCATCTTACCAATATGAAGGTGCATGGAATGAAGGTGGTAGAGGACCAAGCATATGGGATAACTTCACCCACCAGTATCCAGAAAAAATCAGTGATGGAAGCAATGGGGACGTGGCTGATGATCAATACCGCCGCTATAAGGAAGATGTAAAGATTATGAAGGATATGGGATTGGATGCTTATAGGTTCTCTATCTCTTGGTCCAGATTACGGAATGGAAAGCTAAGTGGGGGTGTGAACAAGGAAGGAGTACAATACTACAACAATCTCATCAATGAACTCCTAAACAAAGGTCTAACGCCATATGCGACAATCTTTCATTGGGATCTTCCTCAAGCTTTAGAAGAAAAATATGGTGGTTTCTTAAACCGTCAAATTGTCAATCATTTTCGAGACTATGCAGAACTTTGCTTTAAGTTATTTGGCGATCGGGTAAAGCATTGGATCACACAAAATGAGCCACGGACTTATATTGTTAATGGCTATGCATCAGGAGGATTCGCACCCGGGCGATGTTCTGCTTGGCAGAACTTAAACTGCACCAGCGGTGATTCGGCTACCGAACCCTATATAGTAGCACACCACTTCCTCCTCGCTCATGCACATGCTGTTAAAGTGTACAAGACTAAATATCAGGCATCTCAAAAAGGCGTGATAGGAATGTCATTAGGGACACGTTGGTTTGTGCCAGTTTCTAAAGCAACGCGTCATCGGAATGCTGCAAATCGATCTTTGGATTTTATGTTTGGATGGTTCATGGAGCCAATGACAAGCGGCCAATATCCGCACAGTATGCAAGTTCTTGTTAAAGAACGATTACCTAAATTTACAGAAGAAGAATCCAAGTTAATAAAAGGGTCATTTGATTTTGTTGGAATAAATTATTATACTACTTACTATTCAAGATATCAACCTCATAATAATTCTGCAAATGCAAGCTACTTGACTGATGCTCGCGTTTTTGAATCAACCGAGCTTAATGGAGTCCCCCTTGGTCCTCCGGCTGCTTCAAGCTGGCTAGTTGTTTATCCAAAAGGCATTCAAGAGATTTTACTCTACACAAAGCACAAATATAATGATCCGCTCATTTATATTACTGAGAACGGCGTTGATGAGTTTAATGATCCCACATTGTCACTTCCGCAATCCCTCAATGATACCCACAGAATTGATTACCACTACCACCACCTAGACTATCTTCGAAAAGCAATCAATGATGGTGTAAATGTGAAGGGATACTTTTCATGGTCATTAATGGACAATTTTGAATGGACTTCTGGATACACCGTACGATTTGGTTTCGTCTATATAGATCACGATGATGGACTTAAGAGGCACCCAAAACTCTCAGCAACCTGGTTCAAATATTTCCTTGGATAA

Protein Analysis

513

Amino Acids

58.38

Weight (kDa)

8.57

Isoelectric Point (pI)

29.96

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1494
AccBSI CCGCTC 1 cut(s) 1243
AccII CGCG 2 cut(s) 865, 1116
AciI CCGC 8 cut(s) 59, 289, 292, 705, 933, 944, 1241, 1301
AclWI GGATC 4 cut(s) 492, 611, 1232, 1277
AcoI YGGCCR 1 cut(s) 934
AcsI RAATTY 1 cut(s) 983
AcuI CTGAAG 1 cut(s) 141
AfaI GTAC 3 cut(s) 411, 779, 1449
AfiI CCNNNNNNNGG 2 cut(s) 298, 369
AflII CTTAAG 1 cut(s) 1487
AflIII ACRYGT 2 cut(s) 833, 863
AgsI TTSAA 6 cut(s) 1062, 1124, 1170, 1202, 1427, 1522
AjiI CACGTC 1 cut(s) 271
AjnI CCWGG 1 cut(s) 1514
AluBI AGCT 6 cut(s) 155, 382, 497, 1098, 1135, 1173
AluI AGCT 6 cut(s) 155, 382, 497, 1098, 1135, 1173
Alw26I GTCTC 1 cut(s) 546
AlwI GGATC 4 cut(s) 492, 611, 1232, 1277
AlwNI CAGNNNCTG 1 cut(s) 22
Ama87I CYCGRG 1 cut(s) 665
AoxI GGCC 1 cut(s) 934
ApeKI GCWGC 3 cut(s) 56, 878, 1163
ApoI RAATTY 1 cut(s) 983
AseI ATTAAT 1 cut(s) 1412
AspS9I GGNCC 3 cut(s) 203, 360, 1154
AsuC2I CCSGG 2 cut(s) 666, 667
AsuHPI GGTGA 2 cut(s) 217, 719
AsuII TTCGAA 1 cut(s) 1360
AvaI CYCGRG 1 cut(s) 665
AvaII GGWCC 3 cut(s) 203, 360, 1154
BanI GGYRCC 1 cut(s) 1494
BbvI GCAGC 3 cut(s) 68, 865, 1150
BccI CCATC 6 cut(s) 59, 139, 248, 903, 1370, 1475
BceAI ACGGC 1 cut(s) 1279
BciT130I CCWGG 1 cut(s) 1516
BciVI GTATCC 3 cut(s) 246, 1388, 1433
BclI TGATCA 1 cut(s) 280
BcnI CCSGG 2 cut(s) 666, 667
BcoDI GTCTC 1 cut(s) 546
BfaI CTAG 2 cut(s) 1178, 1349
BfrI CTTAAG 1 cut(s) 1487
BfuI GTATCC 3 cut(s) 246, 1388, 1433
BisI GCNGC 6 cut(s) 57, 60, 292, 879, 934, 1164
BlsI GCNGC 6 cut(s) 58, 61, 293, 880, 935, 1165
Bme1390I CCNGG 3 cut(s) 666, 667, 1516
Bme18I GGWCC 3 cut(s) 203, 360, 1154
BmeT110I CYCGRG 1 cut(s) 665
BmgBI CACGTC 1 cut(s) 271
BmgT120I GGNCC 3 cut(s) 203, 360, 1154
BmiI GGNNCC 2 cut(s) 921, 1496
BmrFI CCNGG 3 cut(s) 666, 667, 1516
BmrI ACTGGG 1 cut(s) 84
BmsI GCATC 5 cut(s) 170, 325, 656, 806, 1099
BmuI ACTGGG 1 cut(s) 84
Bpu14I TTCGAA 1 cut(s) 1360
BpuEI CTTGAG 1 cut(s) 477
BpuMI CCSGG 2 cut(s) 666, 667
Bsa29I ATCGAT 1 cut(s) 886
BsaJI CCNNGG 4 cut(s) 620, 665, 1150, 1531
Bsc4I CCNNNNNNNGG 2 cut(s) 298, 369
Bse1I ACTGG 4 cut(s) 52, 90, 232, 848
Bse3DI GCAATG 2 cut(s) 12, 268
BseBI CCWGG 1 cut(s) 1516
BseCI ATCGAT 1 cut(s) 886
BseDI CCNNGG 4 cut(s) 620, 665, 1150, 1531
BseGI GGATG 2 cut(s) 340, 914
BseLI CCNNNNNNNGG 2 cut(s) 298, 369
BseMI GCAATG 2 cut(s) 12, 268
BseMII CTCAG 2 cut(s) 1248, 1521
BseNI ACTGG 4 cut(s) 52, 90, 232, 848
BseRI GAGGAG 1 cut(s) 740
BseXI GCAGC 3 cut(s) 68, 865, 1150
BsgI GTGCAG 1 cut(s) 682
Bsh1236I CGCG 2 cut(s) 865, 1116
Bsh1285I CGRYCG 1 cut(s) 589
BshFI GGCC 1 cut(s) 936
BshNI GGYRCC 1 cut(s) 1494
BshVI ATCGAT 1 cut(s) 886
BsiEI CGRYCG 1 cut(s) 589
BsiHKCI CYCGRG 1 cut(s) 665
BsiSI CCGG 2 cut(s) 666, 1160
BsiWI CGTACG 1 cut(s) 1447
BslFI GGGAC 3 cut(s) 281, 844, 1130
BslI CCNNNNNNNGG 2 cut(s) 298, 369
BsmAI GTCTC 1 cut(s) 546
BsmFI GGGAC 3 cut(s) 281, 844, 1130
BsmI GAATGC 2 cut(s) 880, 1197
BsnI GGCC 1 cut(s) 936
BsoBI CYCGRG 1 cut(s) 665
Bsp119I TTCGAA 1 cut(s) 1360
Bsp1407I TGTACA 1 cut(s) 777
Bsp143I GATC 8 cut(s) 280, 484, 586, 603, 887, 1237, 1282, 1471
BspACI CCGC 8 cut(s) 59, 289, 292, 705, 933, 944, 1241, 1301
BspANI GGCC 1 cut(s) 936
BspCNI CTCAG 2 cut(s) 1249, 1520
BspDI ATCGAT 1 cut(s) 886
BspFNI CGCG 2 cut(s) 865, 1116
BspLI GGNNCC 2 cut(s) 921, 1496
BspPI GGATC 4 cut(s) 492, 611, 1232, 1277
BspT104I TTCGAA 1 cut(s) 1360
BspT107I GGYRCC 1 cut(s) 1494
BspTI CTTAAG 1 cut(s) 1487
BsrBI CCGCTC 1 cut(s) 1243
BsrDI GCAATG 2 cut(s) 12, 268
BsrGI TGTACA 1 cut(s) 777
BsrI ACTGG 4 cut(s) 52, 90, 232, 848
BssECI CCNNGG 4 cut(s) 620, 665, 1150, 1531
BssMI GATC 8 cut(s) 280, 484, 586, 603, 887, 1237, 1282, 1471
BssT1I CCWWGG 2 cut(s) 1150, 1531
Bst2UI CCWGG 1 cut(s) 1516
Bst4CI ACNGT 4 cut(s) 18, 530, 950, 1447
BstAFI CTTAAG 1 cut(s) 1487
BstAPI GCANNNNNTGC 1 cut(s) 952
BstAUI TGTACA 1 cut(s) 777
BstBI TTCGAA 1 cut(s) 1360
BstC8I GCNNGC 3 cut(s) 1096, 1114, 1175
BstDEI CTNAG 3 cut(s) 383, 1257, 1507
BstDSI CCRYGG 1 cut(s) 620
BstF5I GGATG 2 cut(s) 340, 914
BstFNI CGCG 2 cut(s) 865, 1116
BstKTI GATC 8 cut(s) 283, 487, 589, 606, 890, 1240, 1285, 1474
BstMAI GTCTC 1 cut(s) 546
BstMBI GATC 8 cut(s) 280, 484, 586, 603, 887, 1237, 1282, 1471
BstMCI CGRYCG 1 cut(s) 589
BstMWI GCNNNNNNNGC 1 cut(s) 952
BstNI CCWGG 1 cut(s) 1516
BstNSI RCATGY 1 cut(s) 767
BstSCI CCNGG 3 cut(s) 664, 665, 1514
BstUI CGCG 2 cut(s) 865, 1116
BstV1I GCAGC 3 cut(s) 68, 865, 1150
BstX2I RGATCY 1 cut(s) 484
BstXI CCANNNNNNTGG 1 cut(s) 213
BstYI RGATCY 1 cut(s) 484
Bsu15I ATCGAT 1 cut(s) 886
BsuI GTATCC 3 cut(s) 246, 1388, 1433
BsuRI GGCC 1 cut(s) 936
BsuTUI ATCGAT 1 cut(s) 886
BtgI CCRYGG 1 cut(s) 620
BtgZI GCGATG 1 cut(s) 685
BtrI CACGTC 1 cut(s) 271
BtsCI GGATG 2 cut(s) 340, 914
BtsI GCAGTG 2 cut(s) 20, 109
BtsIMutI CAGTG 3 cut(s) 20, 109, 256
Cac8I GCNNGC 3 cut(s) 1096, 1114, 1175
CaiI CAGNNNCTG 1 cut(s) 22
Cfr13I GGNCC 3 cut(s) 203, 360, 1154
Cfr9I CCCGGG 1 cut(s) 665
ClaI ATCGAT 1 cut(s) 886
CseI GACGC 1 cut(s) 854
CsiI ACCWGGT 1 cut(s) 1514
Csp6I GTAC 3 cut(s) 410, 778, 1448
CviAII CATG 5 cut(s) 183, 758, 764, 916, 1404
CviQI GTAC 3 cut(s) 410, 778, 1448
DdeI CTNAG 3 cut(s) 383, 1257, 1507
DpnI GATC 8 cut(s) 282, 486, 588, 605, 889, 1239, 1284, 1473
DpnII GATC 8 cut(s) 280, 484, 586, 603, 887, 1237, 1282, 1471
EaeI YGGCCR 1 cut(s) 934
Eco130I CCWWGG 2 cut(s) 1150, 1531
Eco32I GATATC 1 cut(s) 1067
Eco47I GGWCC 3 cut(s) 203, 360, 1154
Eco57I CTGAAG 1 cut(s) 141
Eco88I CYCGRG 1 cut(s) 665
EcoRII CCWGG 1 cut(s) 1514
EcoRV GATATC 1 cut(s) 1067
EcoT14I CCWWGG 2 cut(s) 1150, 1531
EcoT22I ATGCAT 1 cut(s) 649
ErhI CCWWGG 2 cut(s) 1150, 1531
FaeI CATG 5 cut(s) 186, 761, 767, 919, 1407
FalI AAGNNNNNCTT 2 cut(s) 1382, 1414
FaqI GGGAC 3 cut(s) 281, 844, 1130
FatI CATG 5 cut(s) 182, 757, 763, 915, 1403
FauNDI CATATG 2 cut(s) 212, 463
FbaI TGATCA 1 cut(s) 280
Fnu4HI GCNGC 6 cut(s) 57, 60, 292, 879, 934, 1164
FokI GGATG 2 cut(s) 347, 921
Fsp4HI GCNGC 6 cut(s) 57, 60, 292, 879, 934, 1164
FspBI CTAG 2 cut(s) 1178, 1349
GluI GCNGC 6 cut(s) 57, 60, 292, 879, 934, 1164
HaeIII GGCC 1 cut(s) 936
HapII CCGG 2 cut(s) 666, 1160
HgaI GACGC 1 cut(s) 854
Hin1II CATG 5 cut(s) 186, 761, 767, 919, 1407
HindIII AAGCTT 1 cut(s) 495
HinfI GANTC 5 cut(s) 657, 710, 998, 1124, 1143
HpaII CCGG 2 cut(s) 666, 1160
HphI GGTGA 2 cut(s) 217, 719
Hpy166II GTNNAC 2 cut(s) 397, 778
Hpy188I TCNGA 1 cut(s) 873
Hpy188III TCNNGA 8 cut(s) 239, 363, 551, 651, 1062, 1202, 1437, 1475
Hpy8I GTNNAC 2 cut(s) 397, 778
HpyAV CCTTC 5 cut(s) 170, 185, 313, 398, 1384
HpyCH4III ACNGT 4 cut(s) 18, 530, 950, 1447
HpyCH4IV ACGT 2 cut(s) 270, 835
HpyF10VI GCNNNNNNNGC 1 cut(s) 952
HpyF3I CTNAG 3 cut(s) 383, 1257, 1507
HpySE526I ACGT 2 cut(s) 270, 835
Hsp92II CATG 5 cut(s) 186, 761, 767, 919, 1407
Ksp22I TGATCA 1 cut(s) 280
Kzo9I GATC 8 cut(s) 280, 484, 586, 603, 887, 1237, 1282, 1471
LmnI GCTCC 1 cut(s) 919
Lsp1109I GCAGC 3 cut(s) 68, 865, 1150
LweI GCATC 5 cut(s) 170, 325, 656, 806, 1099
MabI ACCWGGT 1 cut(s) 1514
MaeI CTAG 2 cut(s) 1178, 1349
MaeII ACGT 2 cut(s) 270, 835
MaeIII GTNAC 3 cut(s) 12, 18, 1293
MalI GATC 8 cut(s) 282, 486, 588, 605, 889, 1239, 1284, 1473
MbiI CCGCTC 1 cut(s) 1243
MboI GATC 8 cut(s) 280, 484, 586, 603, 887, 1237, 1282, 1471
MboII GAAGA 6 cut(s) 314, 479, 515, 1004, 1007, 1349
MflI RGATCY 1 cut(s) 484
MluCI AATT 6 cut(s) 534, 983, 1039, 1081, 1326, 1420
MluI ACGCGT 1 cut(s) 863
MlyI GAGTC 1 cut(s) 1152
MmeI TCCRAC 1 cut(s) 1012
Mph1103I ATGCAT 1 cut(s) 649
MslI CAYNNNNRTG 3 cut(s) 762, 873, 1479
MspA1I CMGCKG 2 cut(s) 59, 705
MspCI CTTAAG 1 cut(s) 1487
MspI CCGG 2 cut(s) 666, 1160
MspR9I CCNGG 3 cut(s) 666, 667, 1516
Mva1269I GAATGC 2 cut(s) 880, 1197
MvaI CCWGG 1 cut(s) 1516
MvnI CGCG 2 cut(s) 865, 1116
MwoI GCNNNNNNNGC 1 cut(s) 952
NciI CCSGG 2 cut(s) 666, 667
NdeI CATATG 2 cut(s) 212, 463
NdeII GATC 8 cut(s) 280, 484, 586, 603, 887, 1237, 1282, 1471
NlaIII CATG 5 cut(s) 186, 761, 767, 919, 1407
NlaIV GGNNCC 2 cut(s) 921, 1496
NmuCI GTSAC 2 cut(s) 18, 1293
NsiI ATGCAT 1 cut(s) 649
NspI RCATGY 1 cut(s) 767
NspV TTCGAA 1 cut(s) 1360
PcsI WCGNNNNNNNCGW 1 cut(s) 464
PctI GAATGC 2 cut(s) 880, 1197
PfeI GAWTC 4 cut(s) 657, 710, 998, 1124
Pfl23II CGTACG 1 cut(s) 1447
PkrI GCNGC 6 cut(s) 58, 61, 293, 880, 935, 1165
Ple19I CGATCG 1 cut(s) 589
PleI GAGTC 1 cut(s) 1151
PpsI GAGTC 1 cut(s) 1151
PshBI ATTAAT 1 cut(s) 1412
Psp6I CCWGG 1 cut(s) 1514
PspGI CCWGG 1 cut(s) 1514
PspLI CGTACG 1 cut(s) 1447
PspN4I GGNNCC 2 cut(s) 921, 1496
PspPI GGNCC 3 cut(s) 203, 360, 1154
PstNI CAGNNNCTG 1 cut(s) 22
PsuI RGATCY 1 cut(s) 484
PvuI CGATCG 1 cut(s) 589
RsaI GTAC 3 cut(s) 411, 779, 1449
RsaNI GTAC 3 cut(s) 410, 778, 1448
RseI CAYNNNNRTG 3 cut(s) 762, 873, 1479
SatI GCNGC 6 cut(s) 57, 60, 292, 879, 934, 1164
Sau3AI GATC 8 cut(s) 280, 484, 586, 603, 887, 1237, 1282, 1471
Sau96I GGNCC 3 cut(s) 203, 360, 1154
SchI GAGTC 1 cut(s) 1152
ScrFI CCNGG 3 cut(s) 666, 667, 1516
SexAI ACCWGGT 1 cut(s) 1514
SfaNI GCATC 5 cut(s) 170, 325, 656, 806, 1099
SfuI TTCGAA 1 cut(s) 1360
SinI GGWCC 3 cut(s) 203, 360, 1154
SmaI CCCGGG 1 cut(s) 667
SmiMI CAYNNNNRTG 3 cut(s) 762, 873, 1479
SmlI CTYRAG 2 cut(s) 492, 1487
SmoI CTYRAG 2 cut(s) 492, 1487
Sse9I AATT 6 cut(s) 534, 983, 1039, 1081, 1326, 1420
SsiI CCGC 8 cut(s) 59, 289, 292, 705, 933, 944, 1241, 1301
SspI AATATT 1 cut(s) 1526
SspMI CTAG 2 cut(s) 1178, 1349
StyD4I CCNGG 3 cut(s) 664, 665, 1514
StyI CCWWGG 2 cut(s) 1150, 1531
TaaI ACNGT 4 cut(s) 18, 530, 950, 1447
TaiI ACGT 2 cut(s) 273, 838
TaqI TCGA 3 cut(s) 550, 886, 1360
TasI AATT 6 cut(s) 534, 983, 1039, 1081, 1326, 1420
TatI WGTACW 2 cut(s) 409, 777
TauI GCSGC 3 cut(s) 62, 294, 936
TfiI GAWTC 4 cut(s) 657, 710, 998, 1124
TscAI CASTG 3 cut(s) 27, 109, 256
TseFI GTSAC 2 cut(s) 18, 1293
TseI GCWGC 3 cut(s) 56, 878, 1163
Tsp45I GTSAC 2 cut(s) 18, 1293
TspDTI ATGAA 7 cut(s) 189, 204, 332, 450, 467, 904, 1392
TspGWI ACGGA 2 cut(s) 385, 637
TspMI CCCGGG 1 cut(s) 665
TspRI CASTG 3 cut(s) 27, 109, 256
Vha464I CTTAAG 1 cut(s) 1487
VpaK11BI GGWCC 3 cut(s) 203, 360, 1154
VspI ATTAAT 1 cut(s) 1412
XapI RAATTY 1 cut(s) 983
XceI RCATGY 1 cut(s) 767
XmaI CCCGGG 1 cut(s) 665
XspI CTAG 2 cut(s) 1178, 1349
Zsp2I ATGCAT 1 cut(s) 649
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.