Rmu_sc0006499.1_g000016

Belongs to the glycosyl hydrolase 1 family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006499.1
OG0000117
Physical Location & Seq
Forward (+)
58476 .. 64666
6191 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006499.1_g000016.1.cds

Sequence Viewer

Length: 1419 bp
atggcaatccaggggtctttgcttttggccatagcgtttctagtacttggctttggatttagaaatggtaaggccagtaatacaccccctgctcaatatgacactgctttcctcaacaggactagtttcccagcaggtttcatatttgggacagcttcatcatcttaccaggaagatgtggggattatgaagaacatggagttggatgcatatcggttctctatctcatggtccagattgttatcaaatggaaagctaactgggggcgtgaaccaggaaggagtcaaatactacaacaatctcatcaatgaactcttacgcaatggtctaaagccatttgtaaccctcttccactgggatcttccccagactttagaagatgaatatggcggtttcttaagccctctcattgtcaatcatttccgggactatgcagagctttgttacaaggaatttggtgatagggtaaagcactggatcacttttaatgagccatatagttatagtgctggtggttatgcagtggcaattttggcaccaggacgctgttctgattggcaggaactaaattgcaccggtgggaattcggatactgaaccatacttggtggcacacaaccagctccttgctcatacagctgcagtaacattatacaagcagaaatatcagtcatctcaaaagggattaatagggattactctagtgtcaaactggtttgtgccggtttctgaggcagagcaccataaaaatgctgcactaagagctctagattatatgtttggatggtttatggaccccttgacaaatggtgactatccacacagcatgagatctcttgttggaaaccgattacccaaattcacaaaggagcaatccaagttgctaattggatcatttgattttctgggattgaattactatacagctaattatgcagccgatgcacctcactataattctgtcaatgcaagctacttgacagacgctcgtgctactctttcctatgtgcttaatggaattcccattggaccaaaggctgcttcagattggctatacgtttatcccagaggaattcgagatcttttgctatacacgaagacaaagtataatgatccactcatatacgttactgagaatggtattgatgagttcaatgatcccaaattaacacttgaagtagcccttaatgacacccagagagtcgactactactatcgccacctctattaccttcaaagagcaatcaaggatggtgtgaatgttaagggatactttgcatggtcattgctagacaactttgaatggaattctggttacactgtccgatttggtatcaactatgtagattacaaaaatgggcagaataggcacccaaaactttctgcacactggttcaaacgtttcctcaagaaaaggtaa

Protein Analysis

472

Amino Acids

53.84

Weight (kDa)

8.4

Isoelectric Point (pI)

24.18

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000117)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G47600 AT1G47600 AT1G51470 AT1G51490
fragaria_vesca FvH4_3g43490 FvH4_3g43490 FvH4_3g43490 FvH4_3g43500 FvH4_3g43501 FvH4_3g43501 FvH4_3g43502 FvH4_3g43503 FvH4_3g43504 FvH4_3g43504 FvH4_3g43504 FvH4_3g43510 FvH4_3g43520 FvH4_3g43520 FvH4_3g43520
malus_domestica MD00G1105700.v1.1 MD00G1105800.v1.1 MD00G1145200.v1.1 MD00G1145300.v1.1 MD00G1190900.v1.1 MD00G1219900.v1.1 MD03G1011300.v1.1 MD03G1021500.v1.1 MD03G1021600.v1.1 MD03G1068100.v1.1 MD03G1068200.v1.1 MD03G1069100.v1.1 MD03G1069400.v1.1 MD03G1069500.v1.1 MD03G1069600.v1.1 MD03G1098600.v1.1 MD03G1204500.v1.1 MD03G1204600.v1.1 MD03G1204700.v1.1 MD03G1204800.v1.1 MD05G1053100.v1.1 MD05G1105800.v1.1 MD05G1105900.v1.1 MD05G1106100.v1.1 MD05G1106200.v1.1 MD05G1114800.v1.1 MD05G1114900.v1.1 MD05G1121900.v1.1 MD05G1312800.v1.1 MD09G1243000.v1.1 MD09G1243300.v1.1 MD10G1124500.v1.1 MD11G1023200.v1.1 MD11G1023700.v1.1 MD11G1023900.v1.1 MD11G1024000.v1.1 MD11G1024100.v1.1 MD11G1027500.v1.1 MD11G1027700.v1.1 MD12G1211300.v1.1 MD12G1211400.v1.1 MD12G1211500.v1.1 MD15G1374300.v1.1 MD15G1441900.v1.1 MD15G1442000.v1.1 MD15G1442100.v1.1
prunus_persica Prupe.1G014500_v2.0.a1 Prupe.1G584100_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G197900_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198000_v2.0.a1 Prupe.2G198100_v2.0.a1 Prupe.2G198200_v2.0.a1 Prupe.2G198300_v2.0.a1 Prupe.2G198400_v2.0.a1 Prupe.3G110900_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.3G111000_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.4G165800_v2.0.a1 Prupe.6G018800_v2.0.a1 Prupe.6G018900_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019000_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019100_v2.0.a1 Prupe.6G019200_v2.0.a1 Prupe.6G019300_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019500_v2.0.a1 Prupe.6G019600_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019700_v2.0.a1 Prupe.6G019900_v2.0.a1 Prupe.6G020100_v2.0.a1 Prupe.6G088200_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G134900_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136100_v2.0.a1 Prupe.6G136300_v2.0.a1 Prupe.6G136400_v2.0.a1 Prupe.6G136500_v2.0.a1 Prupe.6G136700_v2.0.a1 Prupe.6G145100_v2.0.a1 Prupe.7G083600_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G083700_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105400_v2.0.a1 Prupe.7G105800_v2.0.a1 Prupe.7G106100_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.8G165700_v2.0.a1 Prupe.I005900_v2.0.a1
pyrus_communis pycom02g06130 pycom02g06140 pycom03g05540 pycom05g09690 pycom05g09730 pycom05g11590 pycom05g13130 pycom09g16130 pycom09g16140 pycom09g16150 pycom09g16160 pycom09g16190 pycom11g01890 pycom11g02100 pycom11g02130 pycom11g09390 pycom11g09400 pycom11g09490 pycom812g00010
rosa_chinensis RchiOBHm_Chr5g0071491 RchiOBHm_Chr5g0071511 RchiOBHm_Chr5g0077911 RchiOBHm_Chr5g0077951 RchiOBHm_Chr5g0077961 RchiOBHm_Chr5g0077971 RchiOBHm_Chr5g0077981 RchiOBHm_Chr5g0078001 RchiOBHm_Chr5g0078011
rosa_laevigata RLG00000036725 RLG00000036729 RLG00000036732 RLG00000036735 RLG00000036736 RLG00000036737 RLG00000036738 RLG00000036739 RLG00000036740 RLG00000036741 RLG00000036745
rosa_multiflora Rmu_co8284559.1_g000001 Rmu_co8309117.1_g000001 Rmu_sc0000177.1_g000021 Rmu_sc0001711.1_g000024 Rmu_sc0002139.1_g000001 Rmu_sc0002139.1_g000004 Rmu_sc0002139.1_g000005 Rmu_sc0004697.1_g000006 Rmu_sc0006499.1_g000016 Rmu_sc0009988.1_g000001
rosa_roxburghii Rroxscaffold_1G00000230 Rroxscaffold_1G00000260 Rroxscaffold_1G00000280 Rroxscaffold_1G00000290 Rroxscaffold_1G00004220 Rroxscaffold_1G00004280
rosa_rugosa Rorug05G0457000 Rorug05G0457100 Rorug05G0457200 Rorug05G0457300 Rorug05G0457400 Rorug05G0457500 Rorug05G0457600 Rorug05G0457700 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457800 Rorug05G0457900 Rorug05G0458000 Rorug05G0458100
rosa_samantha Rh5AG468700 Rh5AG468800 Rh5AG511700 Rh5AG512200 Rh5AG512300 Rh5AG512400 Rh5AG512700 Rh5AG512800 Rh5CG558300 Rh5CG558500 Rh5DG546000 Rh5DG546300 Rh5DG546600 Rh5DG546700 Rh5DG546900 Rh5DG547000 Rh5DG547100 Rh5DG547300 Rh6BG198200
rosa_wichuraiana Rw5G043550 Rw5G047470 Rw5G047480 Rw5G047500 Rw5G047510 Rw5G047520 Rw5G047530 Rw5G047540 Rw5G047550 Rw5G047560 Rw6G016930

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 125
AccB1I GGYRCC 2 cut(s) 535, 1368
AccI GTMKAC 1 cut(s) 1203
AciI CCGC 1 cut(s) 390
AclI AACGTT 1 cut(s) 1399
AclWI GGATC 5 cut(s) 366, 485, 898, 1106, 1151
AcoI YGGCCR 1 cut(s) 27
AcsI RAATTY 6 cut(s) 452, 583, 857, 1017, 1071, 1306
AcuI CTGAAG 1 cut(s) 1026
AfaI GTAC 1 cut(s) 45
AflII CTTAAG 1 cut(s) 397
AgeI ACCGGT 1 cut(s) 575
AgsI TTSAA 6 cut(s) 913, 1153, 1175, 1235, 1301, 1396
AhlI ACTAGT 1 cut(s) 122
AjnI CCWGG 4 cut(s) 9, 168, 273, 538
AjuI GAANNNNNNNTTGG 4 cut(s) 185, 217, 1024, 1056
AluBI AGCT 8 cut(s) 155, 256, 439, 622, 638, 764, 926, 972
AluI AGCT 8 cut(s) 155, 256, 439, 622, 638, 764, 926, 972
Alw21I GWGCWC 2 cut(s) 741, 766
AlwI GGATC 5 cut(s) 366, 485, 898, 1106, 1151
AoxI GGCC 2 cut(s) 27, 72
ApeKI GCWGC 4 cut(s) 638, 752, 935, 1037
ApoI RAATTY 6 cut(s) 452, 583, 857, 1017, 1071, 1306
AseI ATTAAT 1 cut(s) 686
AsiGI ACCGGT 1 cut(s) 575
AspS9I GGNCC 3 cut(s) 231, 793, 1028
AsuC2I CCSGG 1 cut(s) 425
AsuHPI GGTGA 2 cut(s) 470, 821
AvaII GGWCC 3 cut(s) 231, 793, 1028
BalI TGGCCA 1 cut(s) 29
BanI GGYRCC 2 cut(s) 535, 1368
BanII GRGCYC 1 cut(s) 766
BauI CACGAG 1 cut(s) 987
BbsI GAAGAC 1 cut(s) 1103
Bbv12I GWGCWC 2 cut(s) 741, 766
BbvI GCAGC 4 cut(s) 625, 739, 947, 1024
BccI CCATC 2 cut(s) 777, 1244
BciT130I CCWGG 4 cut(s) 11, 170, 275, 540
BciVI GTATCC 2 cut(s) 583, 1262
BcnI CCSGG 1 cut(s) 425
BcuI ACTAGT 1 cut(s) 122
BfaI CTAG 5 cut(s) 41, 123, 701, 767, 1289
BfmI CTRYAG 1 cut(s) 639
BfrI CTTAAG 1 cut(s) 397
BfuAI ACCTGC 1 cut(s) 125
BfuI GTATCC 2 cut(s) 583, 1262
BglII AGATCT 2 cut(s) 830, 1078
BisI GCNGC 4 cut(s) 639, 753, 936, 1038
BlsI GCNGC 4 cut(s) 640, 754, 937, 1039
BmcAI AGTACT 1 cut(s) 45
Bme1390I CCNGG 5 cut(s) 11, 170, 275, 425, 540
Bme18I GGWCC 3 cut(s) 231, 793, 1028
BmgT120I GGNCC 3 cut(s) 231, 793, 1028
BmiI GGNNCC 3 cut(s) 537, 795, 1370
BmrFI CCNGG 5 cut(s) 11, 170, 275, 425, 540
BmrI ACTGGG 2 cut(s) 270, 364
BmsI GCATC 2 cut(s) 196, 931
BmuI ACTGGG 2 cut(s) 270, 364
BpiI GAAGAC 1 cut(s) 1103
BpuEI CTTGAG 1 cut(s) 1391
BpuMI CCSGG 1 cut(s) 425
BsaBI GATNNNNATC 2 cut(s) 210, 241
BsaJI CCNNGG 1 cut(s) 10
BsaWI WCCGGW 1 cut(s) 575
Bse118I RCCGGY 2 cut(s) 575, 721
Bse1I ACTGG 6 cut(s) 75, 265, 359, 479, 716, 1394
Bse3DI GCAATG 2 cut(s) 328, 1283
Bse8I GATNNNNATC 2 cut(s) 210, 241
BseBI CCWGG 4 cut(s) 11, 170, 275, 540
BseDI CCNNGG 1 cut(s) 10
BseGI GGATG 3 cut(s) 211, 788, 1255
BseJI GATNNNNATC 2 cut(s) 210, 241
BseMI GCAATG 2 cut(s) 328, 1283
BseMII CTCAG 2 cut(s) 720, 1122
BseNI ACTGG 6 cut(s) 75, 265, 359, 479, 716, 1394
BseXI GCAGC 4 cut(s) 625, 739, 947, 1024
BseYI CCCAGC 1 cut(s) 130
BsgI GTGCAG 2 cut(s) 738, 1368
BshFI GGCC 2 cut(s) 29, 74
BshNI GGYRCC 2 cut(s) 535, 1368
BshTI ACCGGT 1 cut(s) 575
BsiHKAI GWGCWC 2 cut(s) 741, 766
BsiSI CCGG 3 cut(s) 424, 576, 722
BslFI GGGAC 2 cut(s) 163, 440
BsmFI GGGAC 2 cut(s) 163, 440
BsnI GGCC 2 cut(s) 29, 74
Bsp1286I GDGCHC 2 cut(s) 741, 766
Bsp143I GATC 7 cut(s) 358, 477, 830, 890, 1078, 1111, 1156
BspACI CCGC 1 cut(s) 390
BspANI GGCC 2 cut(s) 29, 74
BspCNI CTCAG 2 cut(s) 721, 1123
BspLI GGNNCC 3 cut(s) 537, 795, 1370
BspMAI CTGCAG 1 cut(s) 643
BspMI ACCTGC 1 cut(s) 125
BspPI GGATC 5 cut(s) 366, 485, 898, 1106, 1151
BspT107I GGYRCC 2 cut(s) 535, 1368
BspTI CTTAAG 1 cut(s) 397
BsrDI GCAATG 2 cut(s) 328, 1283
BsrFI RCCGGY 2 cut(s) 575, 721
BsrI ACTGG 6 cut(s) 75, 265, 359, 479, 716, 1394
BssAI RCCGGY 2 cut(s) 575, 721
BssECI CCNNGG 1 cut(s) 10
BssMI GATC 7 cut(s) 358, 477, 830, 890, 1078, 1111, 1156
BssSI CACGAG 1 cut(s) 987
Bst2BI CACGAG 1 cut(s) 987
Bst2UI CCWGG 4 cut(s) 11, 170, 275, 540
Bst4CI ACNGT 1 cut(s) 1321
Bst6I CTCTTC 1 cut(s) 353
BstAFI CTTAAG 1 cut(s) 397
BstAPI GCANNNNNTGC 1 cut(s) 941
BstC8I GCNNGC 1 cut(s) 970
BstDEI CTNAG 3 cut(s) 729, 758, 1131
BstF5I GGATG 3 cut(s) 211, 788, 1255
BstKTI GATC 7 cut(s) 361, 480, 833, 893, 1081, 1114, 1159
BstMBI GATC 7 cut(s) 358, 477, 830, 890, 1078, 1111, 1156
BstMWI GCNNNNNNNGC 6 cut(s) 533, 635, 761, 932, 941, 1366
BstNI CCWGG 4 cut(s) 11, 170, 275, 540
BstSCI CCNGG 5 cut(s) 9, 168, 273, 423, 538
BstSFI CTRYAG 1 cut(s) 639
BstV1I GCAGC 4 cut(s) 625, 739, 947, 1024
BstV2I GAAGAC 1 cut(s) 1103
BstX2I RGATCY 3 cut(s) 358, 830, 1078
BstYI RGATCY 3 cut(s) 358, 830, 1078
BsuI GTATCC 2 cut(s) 583, 1262
BsuRI GGCC 2 cut(s) 29, 74
BtsCI GGATG 3 cut(s) 211, 788, 1255
BtsI GCAGTG 2 cut(s) 102, 528
BtsIMutI CAGTG 6 cut(s) 102, 352, 472, 528, 1317, 1387
BveI ACCTGC 1 cut(s) 125
Cac8I GCNNGC 1 cut(s) 970
Cfr10I RCCGGY 2 cut(s) 575, 721
Cfr13I GGNCC 3 cut(s) 231, 793, 1028
CseI GACGC 2 cut(s) 552, 992
Csp6I GTAC 1 cut(s) 44
CspAI ACCGGT 1 cut(s) 575
CviAII CATG 4 cut(s) 196, 228, 826, 1278
CviQI GTAC 1 cut(s) 44
DdeI CTNAG 3 cut(s) 729, 758, 1131
DpnI GATC 7 cut(s) 360, 479, 832, 892, 1080, 1113, 1158
DpnII GATC 7 cut(s) 358, 477, 830, 890, 1078, 1111, 1156
EaeI YGGCCR 1 cut(s) 27
Eam1104I CTCTTC 1 cut(s) 353
EarI CTCTTC 1 cut(s) 353
Ecl136II GAGCTC 1 cut(s) 764
Eco24I GRGCYC 1 cut(s) 766
Eco47I GGWCC 3 cut(s) 231, 793, 1028
Eco53kI GAGCTC 1 cut(s) 764
Eco57I CTGAAG 1 cut(s) 1026
EcoICRI GAGCTC 1 cut(s) 764
EcoRI GAATTC 4 cut(s) 583, 1017, 1071, 1306
EcoRII CCWGG 4 cut(s) 9, 168, 273, 538
EcoT22I ATGCAT 1 cut(s) 211
EcoT38I GRGCYC 1 cut(s) 766
FaeI CATG 4 cut(s) 199, 231, 829, 1281
FalI AAGNNNNNCTT 4 cut(s) 1167, 1199, 1256, 1288
FaqI GGGAC 2 cut(s) 163, 440
FatI CATG 4 cut(s) 195, 227, 825, 1277
FblI GTMKAC 1 cut(s) 1203
Fnu4HI GCNGC 4 cut(s) 639, 753, 936, 1038
FokI GGATG 3 cut(s) 218, 795, 1262
FriOI GRGCYC 1 cut(s) 766
Fsp4HI GCNGC 4 cut(s) 639, 753, 936, 1038
FspBI CTAG 5 cut(s) 41, 123, 701, 767, 1289
GluI GCNGC 4 cut(s) 639, 753, 936, 1038
GsaI CCCAGC 1 cut(s) 134
HaeIII GGCC 2 cut(s) 29, 74
HapII CCGG 3 cut(s) 424, 576, 722
HgaI GACGC 2 cut(s) 552, 992
Hin1II CATG 4 cut(s) 199, 231, 829, 1281
HincII GTYRAC 1 cut(s) 1204
HindII GTYRAC 1 cut(s) 1204
HinfI GANTC 2 cut(s) 282, 1200
HpaII CCGG 3 cut(s) 424, 576, 722
HphI GGTGA 2 cut(s) 470, 821
Hpy166II GTNNAC 2 cut(s) 271, 1204
Hpy188I TCNGA 5 cut(s) 553, 589, 730, 1045, 1325
Hpy188III TCNNGA 4 cut(s) 234, 767, 1076, 1408
Hpy8I GTNNAC 2 cut(s) 271, 1204
HpyAV CCTTC 2 cut(s) 272, 1241
HpyCH4III ACNGT 1 cut(s) 1321
HpyCH4IV ACGT 3 cut(s) 1056, 1125, 1399
HpyF10VI GCNNNNNNNGC 6 cut(s) 533, 635, 761, 932, 941, 1366
HpyF3I CTNAG 3 cut(s) 729, 758, 1131
HpySE526I ACGT 3 cut(s) 1056, 1125, 1399
Hsp92II CATG 4 cut(s) 199, 231, 829, 1281
Kzo9I GATC 7 cut(s) 358, 477, 830, 890, 1078, 1111, 1156
LmnI GCTCC 2 cut(s) 627, 868
Lsp1109I GCAGC 4 cut(s) 625, 739, 947, 1024
LweI GCATC 2 cut(s) 196, 931
MaeI CTAG 5 cut(s) 41, 123, 701, 767, 1289
MaeII ACGT 3 cut(s) 1056, 1125, 1399
MaeIII GTNAC 6 cut(s) 340, 443, 643, 809, 1126, 1313
MalI GATC 7 cut(s) 360, 479, 832, 892, 1080, 1113, 1158
MboI GATC 7 cut(s) 358, 477, 830, 890, 1078, 1111, 1156
MboII GAAGA 6 cut(s) 185, 202, 340, 353, 389, 1108
MflI RGATCY 3 cut(s) 358, 830, 1078
MhlI GDGCHC 2 cut(s) 741, 766
MlsI TGGCCA 1 cut(s) 29
MluNI TGGCCA 1 cut(s) 29
MlyI GAGTC 2 cut(s) 291, 1209
MmeI TCCRAC 2 cut(s) 183, 820
MnlI CCTC 8 cut(s) 122, 356, 414, 724, 957, 1061, 1232, 1415
Mox20I TGGCCA 1 cut(s) 29
Mph1103I ATGCAT 1 cut(s) 211
MscI TGGCCA 1 cut(s) 29
MseI TTAA 7 cut(s) 398, 486, 686, 1011, 1166, 1185, 1263
MslI CAYNNNNRTG 1 cut(s) 747
Msp20I TGGCCA 1 cut(s) 29
MspA1I CMGCKG 1 cut(s) 638
MspCI CTTAAG 1 cut(s) 397
MspI CCGG 3 cut(s) 424, 576, 722
MspR9I CCNGG 5 cut(s) 11, 170, 275, 425, 540
MvaI CCWGG 4 cut(s) 11, 170, 275, 540
MwoI GCNNNNNNNGC 6 cut(s) 533, 635, 761, 932, 941, 1366
NciI CCSGG 1 cut(s) 425
NdeII GATC 7 cut(s) 358, 477, 830, 890, 1078, 1111, 1156
NlaIII CATG 4 cut(s) 199, 231, 829, 1281
NlaIV GGNNCC 3 cut(s) 537, 795, 1370
NmuCI GTSAC 1 cut(s) 809
NsiI ATGCAT 1 cut(s) 211
PfoI TCCNGGA 1 cut(s) 423
PinAI ACCGGT 1 cut(s) 575
PkrI GCNGC 4 cut(s) 640, 754, 937, 1039
PleI GAGTC 2 cut(s) 290, 1208
PpsI GAGTC 2 cut(s) 290, 1208
PshBI ATTAAT 1 cut(s) 686
Psp124BI GAGCTC 1 cut(s) 766
Psp1406I AACGTT 1 cut(s) 1399
Psp6I CCWGG 4 cut(s) 9, 168, 273, 538
PspFI CCCAGC 1 cut(s) 130
PspGI CCWGG 4 cut(s) 9, 168, 273, 538
PspN4I GGNNCC 3 cut(s) 537, 795, 1370
PspPI GGNCC 3 cut(s) 231, 793, 1028
PstI CTGCAG 1 cut(s) 643
PsuI RGATCY 3 cut(s) 358, 830, 1078
PvuII CAGCTG 1 cut(s) 638
RsaI GTAC 1 cut(s) 45
RsaNI GTAC 1 cut(s) 44
RseI CAYNNNNRTG 1 cut(s) 747
SacI GAGCTC 1 cut(s) 766
SalI GTCGAC 1 cut(s) 1202
SaqAI TTAA 7 cut(s) 398, 486, 686, 1011, 1166, 1185, 1263
SatI GCNGC 4 cut(s) 639, 753, 936, 1038
Sau3AI GATC 7 cut(s) 358, 477, 830, 890, 1078, 1111, 1156
Sau96I GGNCC 3 cut(s) 231, 793, 1028
ScaI AGTACT 1 cut(s) 45
SchI GAGTC 2 cut(s) 291, 1209
ScrFI CCNGG 5 cut(s) 11, 170, 275, 425, 540
SduI GDGCHC 2 cut(s) 741, 766
SfaNI GCATC 2 cut(s) 196, 931
SfcI CTRYAG 1 cut(s) 639
SgrAI CRCCGGYG 1 cut(s) 575
SinI GGWCC 3 cut(s) 231, 793, 1028
SmiMI CAYNNNNRTG 1 cut(s) 747
SmlI CTYRAG 2 cut(s) 397, 1406
SmoI CTYRAG 2 cut(s) 397, 1406
SpeI ACTAGT 1 cut(s) 122
SsiI CCGC 1 cut(s) 390
SspMI CTAG 5 cut(s) 41, 123, 701, 767, 1289
SstI GAGCTC 1 cut(s) 766
StyD4I CCNGG 5 cut(s) 9, 168, 273, 423, 538
TaaI ACNGT 1 cut(s) 1321
TaiI ACGT 3 cut(s) 1059, 1128, 1402
TaqI TCGA 2 cut(s) 1075, 1203
TatI WGTACW 1 cut(s) 43
Tru1I TTAA 7 cut(s) 398, 486, 686, 1011, 1166, 1185, 1263
Tru9I TTAA 7 cut(s) 398, 486, 686, 1011, 1166, 1185, 1263
TscAI CASTG 6 cut(s) 109, 359, 479, 528, 1324, 1394
TseFI GTSAC 1 cut(s) 809
TseI GCWGC 4 cut(s) 638, 752, 935, 1037
Tsp45I GTSAC 1 cut(s) 809
TspDTI ATGAA 5 cut(s) 130, 147, 203, 324, 396
TspRI CASTG 6 cut(s) 109, 359, 479, 528, 1324, 1394
Vha464I CTTAAG 1 cut(s) 397
VpaK11BI GGWCC 3 cut(s) 231, 793, 1028
VspI ATTAAT 1 cut(s) 686
XapI RAATTY 6 cut(s) 452, 583, 857, 1017, 1071, 1306
XbaI TCTAGA 1 cut(s) 766
XmiI GTMKAC 1 cut(s) 1203
XspI CTAG 5 cut(s) 41, 123, 701, 767, 1289
ZrmI AGTACT 1 cut(s) 45
Zsp2I ATGCAT 1 cut(s) 211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.